BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034901
MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEPLQLL
IQIGTWKNENRFLIHRKRV

High Scoring Gene Products

Symbol, full name Information P value
AT2G33585 protein from Arabidopsis thaliana 1.1e-21

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034901
        (79 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956013 - symbol:AT2G33585 "AT2G33585" speci...   253  1.1e-21   1


>TAIR|locus:504956013 [details] [associations]
            symbol:AT2G33585 "AT2G33585" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005739 "mitochondrion"
            evidence=IDA] GO:GO:0005739 EMBL:CP002685 IPI:IPI00548306
            RefSeq:NP_850214.1 UniGene:At.44171 PRIDE:F4IFV5
            EnsemblPlants:AT2G33585.1 GeneID:817924 KEGG:ath:AT2G33585
            OMA:SWRRSIG Uniprot:F4IFV5
        Length = 193

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 48/79 (60%), Positives = 61/79 (77%)

Query:     1 MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEPLQLL 60
             MASSWRR+IGN+RSF+GNSMGG+RGG + ASWVVAGT+AY+LW+KP QDLK+EQE    L
Sbjct:    98 MASSWRRSIGNVRSFIGNSMGGLRGGQSAASWVVAGTIAYFLWIKPEQDLKKEQEARAAL 157

Query:    61 IQIGTWKNENRFLIHRKRV 79
                 T    N+++  RK +
Sbjct:   158 AMADT----NQYVEKRKPI 172


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       79        79   0.00091  102 3  11 22  0.39    29
                                                     29  0.39    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  558 (59 KB)
  Total size of DFA:  116 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.65u 0.09s 8.74t   Elapsed:  00:00:03
  Total cpu time:  8.65u 0.09s 8.74t   Elapsed:  00:00:03
  Start:  Fri May 10 03:23:11 2013   End:  Fri May 10 03:23:14 2013

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