Query 034901
Match_columns 79
No_of_seqs 15 out of 17
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 12:12:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034901.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034901hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pjaa_ c.69.1.13 (A:) Palmito 43.1 1.3 9.5E-05 24.8 -1.2 10 14-23 72-81 (268)
2 d1snoa_ b.40.1.1 (A:) Staphylo 39.6 7.3 0.00053 22.4 1.9 22 25-46 90-111 (136)
3 d1jmkc_ c.69.1.22 (C:) Surfact 37.2 1.6 0.00012 25.0 -1.4 10 14-23 74-83 (230)
4 d1ispa_ c.69.1.18 (A:) Lipase 35.7 1.7 0.00012 25.8 -1.6 10 14-23 71-80 (179)
5 d1uiya_ c.14.1.3 (A:) Enoyl-Co 35.2 3.5 0.00025 25.8 -0.2 8 72-79 245-252 (253)
6 d1ex9a_ c.69.1.18 (A:) Lipase 33.1 2.3 0.00017 28.0 -1.4 11 14-24 77-87 (285)
7 d2i14a1 c.1.17.1 (A:111-389) N 30.2 8 0.00059 26.0 1.1 28 4-31 25-54 (279)
8 d1jh6a_ d.61.1.1 (A:) tRNA spl 29.7 15 0.0011 21.8 2.2 24 39-62 8-32 (181)
9 d2b61a1 c.69.1.40 (A:2-358) Ho 29.3 2.4 0.00017 29.8 -1.9 17 10-26 133-149 (357)
10 d1xkta_ c.69.1.22 (A:) Fatty a 27.2 2.9 0.00021 23.4 -1.4 10 15-24 88-97 (286)
11 d3c70a1 c.69.1.20 (A:2-257) Hy 25.4 4 0.00029 22.5 -1.1 9 15-23 75-83 (256)
12 d1ef8a_ c.14.1.3 (A:) Methylma 25.3 6.5 0.00047 25.2 -0.2 8 72-79 250-257 (261)
13 d1ei9a_ c.69.1.13 (A:) Palmito 24.7 4 0.00029 28.0 -1.4 11 14-24 83-93 (279)
14 d1brta_ c.69.1.12 (A:) Bromope 23.4 11 0.0008 21.2 0.6 8 15-22 94-101 (277)
15 d1ehya_ c.69.1.11 (A:) Bacteri 21.6 4.4 0.00032 23.2 -1.4 10 14-23 101-110 (293)
16 d2fw2a1 c.14.1.3 (A:3-260) Chr 21.4 8.9 0.00065 24.5 -0.1 8 72-79 250-257 (258)
No 1
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.08 E-value=1.3 Score=24.82 Aligned_cols=10 Identities=30% Similarity=0.591 Sum_probs=8.4
Q ss_pred hhhhhccccc
Q 034901 14 SFVGNSMGGV 23 (79)
Q Consensus 14 sfi~nsmgG~ 23 (79)
.+||.||||.
T Consensus 72 ~lvGhS~GG~ 81 (268)
T d1pjaa_ 72 HLICYSQGGL 81 (268)
T ss_dssp EEEEETHHHH
T ss_pred EEEccccHHH
Confidence 5789999995
No 2
>d1snoa_ b.40.1.1 (A:) Staphylococcal nuclease {Staphylococcus aureus [TaxId: 1280]}
Probab=39.56 E-value=7.3 Score=22.41 Aligned_cols=22 Identities=23% Similarity=0.176 Sum_probs=17.3
Q ss_pred CchhHHHHHHhhhhheeeEEcC
Q 034901 25 GGANLASWVVAGTLAYYLWVKP 46 (79)
Q Consensus 25 G~~nlAaW~VAG~lAYylwvkP 46 (79)
++.|+...+|.-|+|......+
T Consensus 90 ~g~~l~~~Lv~~G~A~~~~~~~ 111 (136)
T d1snoa_ 90 DGKMVNEALVRQGLAKVAYVYK 111 (136)
T ss_dssp TTEEHHHHHHHTTSCEECCCBT
T ss_pred ecchhHHHHHHCCCEEEeeecC
Confidence 5689999999999997544433
No 3
>d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]}
Probab=37.23 E-value=1.6 Score=24.98 Aligned_cols=10 Identities=30% Similarity=0.464 Sum_probs=8.5
Q ss_pred hhhhhccccc
Q 034901 14 SFVGNSMGGV 23 (79)
Q Consensus 14 sfi~nsmgG~ 23 (79)
.+||.||||+
T Consensus 74 ~lvGhS~GG~ 83 (230)
T d1jmkc_ 74 TLFGYSAGCS 83 (230)
T ss_dssp EEEEETHHHH
T ss_pred EEEeeccChH
Confidence 4689999995
No 4
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}
Probab=35.74 E-value=1.7 Score=25.80 Aligned_cols=10 Identities=50% Similarity=0.880 Sum_probs=8.7
Q ss_pred hhhhhccccc
Q 034901 14 SFVGNSMGGV 23 (79)
Q Consensus 14 sfi~nsmgG~ 23 (79)
.+||.||||+
T Consensus 71 ~lvGHSmGG~ 80 (179)
T d1ispa_ 71 DIVAHSMGGA 80 (179)
T ss_dssp EEEEETHHHH
T ss_pred EEEeecCcCH
Confidence 5789999997
No 5
>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}
Probab=35.23 E-value=3.5 Score=25.83 Aligned_cols=8 Identities=25% Similarity=0.339 Sum_probs=6.8
Q ss_pred eeecccCC
Q 034901 72 FLIHRKRV 79 (79)
Q Consensus 72 yVe~rkpv 79 (79)
|+|||||+
T Consensus 245 f~eKR~P~ 252 (253)
T d1uiya_ 245 FFEKRPPR 252 (253)
T ss_dssp HHTTSCCC
T ss_pred HhCCCCCC
Confidence 88999985
No 6
>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=33.06 E-value=2.3 Score=27.99 Aligned_cols=11 Identities=36% Similarity=0.785 Sum_probs=9.1
Q ss_pred hhhhhcccccC
Q 034901 14 SFVGNSMGGVR 24 (79)
Q Consensus 14 sfi~nsmgG~R 24 (79)
.+||.||||+-
T Consensus 77 ~ligHS~GG~~ 87 (285)
T d1ex9a_ 77 NLIGHSHGGPT 87 (285)
T ss_dssp EEEEETTHHHH
T ss_pred EEEEECccHHH
Confidence 48999999963
No 7
>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]}
Probab=30.21 E-value=8 Score=25.95 Aligned_cols=28 Identities=14% Similarity=0.303 Sum_probs=21.4
Q ss_pred hhhhhhhchhhhhhh--cccccCCchhHHH
Q 034901 4 SWRRTIGNLRSFVGN--SMGGVRGGANLAS 31 (79)
Q Consensus 4 ~wrrt~gn~rsfi~n--smgG~RG~~nlAa 31 (79)
+=||+.+..+...+= ..|||-|.||+++
T Consensus 25 G~Rr~~~~~~~~~~~Aa~igG~~gtSnv~a 54 (279)
T d2i14a1 25 GIRHMHPAIAPMIDRAAFIGGCDGVSGVLG 54 (279)
T ss_dssp GGGGSCGGGHHHHHHHHHHTTCSEESBHHH
T ss_pred CCCCCChhhHHHhCCcEEEeCeeeeehHHH
Confidence 457888888777653 3699999999875
No 8
>d1jh6a_ d.61.1.1 (A:) tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=29.71 E-value=15 Score=21.76 Aligned_cols=24 Identities=17% Similarity=0.509 Sum_probs=15.2
Q ss_pred heeeEEcCchhhhhh-chhhHHHHh
Q 034901 39 AYYLWVKPSQDLKRE-QEPLQLLIQ 62 (79)
Q Consensus 39 AYylwvkPe~~~~~e-qe~raala~ 62 (79)
-|++|..|+.+..++ ++....|+.
T Consensus 8 ~yslwl~P~~~~~~~l~~l~~~l~~ 32 (181)
T d1jh6a_ 8 VYSVWALPDEESEPRFKKLMEALRS 32 (181)
T ss_dssp EEEEEEEECTTTHHHHHHHHHHHHH
T ss_pred cEEEEEECCHHHHHHHHHHHHHHHH
Confidence 399999998775543 334444443
No 9
>d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]}
Probab=29.26 E-value=2.4 Score=29.79 Aligned_cols=17 Identities=29% Similarity=0.814 Sum_probs=12.8
Q ss_pred hchhhhhhhcccccCCc
Q 034901 10 GNLRSFVGNSMGGVRGG 26 (79)
Q Consensus 10 gn~rsfi~nsmgG~RG~ 26 (79)
-.++..||.||||....
T Consensus 133 ~~l~~viG~SmGGmqAl 149 (357)
T d2b61a1 133 SHLKAIIGGSFGGMQAN 149 (357)
T ss_dssp CCEEEEEEETHHHHHHH
T ss_pred ceEEEEecccHHHHHHH
Confidence 35677899999997653
No 10
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.21 E-value=2.9 Score=23.41 Aligned_cols=10 Identities=30% Similarity=0.418 Sum_probs=8.0
Q ss_pred hhhhcccccC
Q 034901 15 FVGNSMGGVR 24 (79)
Q Consensus 15 fi~nsmgG~R 24 (79)
++|.||||.-
T Consensus 88 lvGhS~Gg~v 97 (286)
T d1xkta_ 88 VAGYSYGACV 97 (286)
T ss_dssp EEEETHHHHH
T ss_pred EeecCCccHH
Confidence 5799999963
No 11
>d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]}
Probab=25.44 E-value=4 Score=22.48 Aligned_cols=9 Identities=56% Similarity=1.080 Sum_probs=7.5
Q ss_pred hhhhccccc
Q 034901 15 FVGNSMGGV 23 (79)
Q Consensus 15 fi~nsmgG~ 23 (79)
.||.||||.
T Consensus 75 lvGhS~Gg~ 83 (256)
T d3c70a1 75 LVGESCGGL 83 (256)
T ss_dssp EEEETTHHH
T ss_pred ecccchHHH
Confidence 479999995
No 12
>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]}
Probab=25.29 E-value=6.5 Score=25.20 Aligned_cols=8 Identities=50% Similarity=0.571 Sum_probs=7.2
Q ss_pred eeecccCC
Q 034901 72 FLIHRKRV 79 (79)
Q Consensus 72 yVe~rkpv 79 (79)
|+|||||+
T Consensus 250 fleKR~P~ 257 (261)
T d1ef8a_ 250 FLEKRKPN 257 (261)
T ss_dssp HHTTSCCC
T ss_pred HhCCCCCc
Confidence 89999996
No 13
>d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.71 E-value=4 Score=27.96 Aligned_cols=11 Identities=36% Similarity=0.407 Sum_probs=9.2
Q ss_pred hhhhhcccccC
Q 034901 14 SFVGNSMGGVR 24 (79)
Q Consensus 14 sfi~nsmgG~R 24 (79)
++||-||||+-
T Consensus 83 ~lVGhSqGGLi 93 (279)
T d1ei9a_ 83 NAMGFSQGGQF 93 (279)
T ss_dssp EEEEETTHHHH
T ss_pred eEEEEccccHH
Confidence 68999999973
No 14
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]}
Probab=23.43 E-value=11 Score=21.22 Aligned_cols=8 Identities=50% Similarity=0.667 Sum_probs=6.8
Q ss_pred hhhhcccc
Q 034901 15 FVGNSMGG 22 (79)
Q Consensus 15 fi~nsmgG 22 (79)
.||.||||
T Consensus 94 lvGhS~G~ 101 (277)
T d1brta_ 94 LVGFSTGT 101 (277)
T ss_dssp EEEEGGGH
T ss_pred ccccccch
Confidence 58999996
No 15
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]}
Probab=21.58 E-value=4.4 Score=23.21 Aligned_cols=10 Identities=20% Similarity=0.521 Sum_probs=7.9
Q ss_pred hhhhhccccc
Q 034901 14 SFVGNSMGGV 23 (79)
Q Consensus 14 sfi~nsmgG~ 23 (79)
.+||.||||.
T Consensus 101 ~lvGhS~Gg~ 110 (293)
T d1ehya_ 101 YVVGHDFAAI 110 (293)
T ss_dssp EEEEETHHHH
T ss_pred cccccccccc
Confidence 4688999985
No 16
>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.41 E-value=8.9 Score=24.54 Aligned_cols=8 Identities=0% Similarity=0.160 Sum_probs=6.7
Q ss_pred eeecccCC
Q 034901 72 FLIHRKRV 79 (79)
Q Consensus 72 yVe~rkpv 79 (79)
|+|||+|.
T Consensus 250 f~EKR~p~ 257 (258)
T d2fw2a1 250 YVENKIDE 257 (258)
T ss_dssp HHHSSCCC
T ss_pred HhCCCCCC
Confidence 88999884
Done!