Query 034904
Match_columns 79
No_of_seqs 21 out of 23
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 12:14:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034904.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034904hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kx7a_ a.3.1.1 (A:) Mono-heme 79.1 0.79 5.8E-05 25.1 2.8 23 50-72 50-74 (81)
2 d1cc5a_ a.3.1.1 (A:) Cytochrom 79.0 0.81 5.9E-05 25.0 2.8 22 51-72 54-77 (83)
3 d1dzfa2 d.78.1.1 (A:144-215) E 77.0 0.52 3.8E-05 27.5 1.6 20 54-73 4-23 (72)
4 d1ctja_ a.3.1.1 (A:) Cytochrom 74.7 1.1 7.7E-05 24.4 2.5 22 51-72 56-77 (89)
5 d1gksa_ a.3.1.1 (A:) Cytochrom 70.6 1.5 0.00011 24.3 2.5 24 49-72 48-71 (78)
6 d1eika_ d.78.1.1 (A:) RNA poly 70.6 0.75 5.5E-05 27.0 1.2 20 54-73 8-27 (77)
7 d1ls9a_ a.3.1.1 (A:) Cytochrom 69.8 1.8 0.00013 23.3 2.7 21 52-72 59-79 (91)
8 d1f1fa_ a.3.1.1 (A:) Cytochrom 69.0 1.9 0.00014 22.9 2.7 22 51-72 56-77 (88)
9 d1cyja_ a.3.1.1 (A:) Cytochrom 67.7 2.1 0.00015 23.1 2.7 21 52-72 56-76 (90)
10 d1b09a_ b.29.1.5 (A:) C-reacti 67.3 1.4 0.00011 26.5 2.1 18 61-78 164-181 (206)
11 d1c53a_ a.3.1.1 (A:) Cytochrom 64.1 1.6 0.00011 23.2 1.6 17 56-72 57-73 (79)
12 d1h1oa1 a.3.1.4 (A:12-93) Cyto 62.8 1.8 0.00013 23.3 1.7 17 56-72 53-69 (82)
13 d1gdva_ a.3.1.1 (A:) Cytochrom 62.7 3 0.00022 22.1 2.7 22 51-72 53-74 (85)
14 d1c6sa_ a.3.1.1 (A:) Cytochrom 61.3 2.4 0.00018 22.7 2.1 22 51-72 53-74 (87)
15 d1c75a_ a.3.1.1 (A:) Cytochrom 60.3 3.3 0.00024 22.4 2.5 20 51-72 45-64 (71)
16 d1cora_ a.3.1.1 (A:) Cytochrom 60.1 2.1 0.00015 23.0 1.7 11 62-72 65-75 (82)
17 d1ynra1 a.3.1.1 (A:1-80) Cytoc 57.3 2.5 0.00018 22.8 1.7 11 62-72 63-73 (80)
18 d1fcdc2 a.3.1.4 (C:81-174) Fla 55.7 2.6 0.00019 23.2 1.6 17 56-72 71-87 (94)
19 d1nz8a_ d.58.42.1 (A:) N-utili 54.9 5 0.00036 24.0 2.9 14 59-72 99-112 (119)
20 d1fcdc1 a.3.1.4 (C:1-80) Flavo 53.5 3.1 0.00022 22.3 1.6 12 61-72 59-70 (80)
21 d351ca_ a.3.1.1 (A:) Cytochrom 53.3 3.3 0.00024 22.2 1.8 11 62-72 65-75 (82)
22 d1m1ha2 d.58.42.1 (A:5-50,A:13 50.9 2.6 0.00019 25.3 1.1 13 60-72 84-96 (101)
23 d1m70a1 a.3.1.4 (A:1-92) Cytoc 49.9 6.6 0.00048 20.6 2.6 17 56-72 66-82 (92)
24 d1f1ca_ a.3.1.1 (A:) Photosyst 48.5 4 0.00029 23.0 1.7 11 62-72 104-114 (129)
25 d1a56a_ a.3.1.1 (A:) Cytochrom 45.8 3.6 0.00026 22.1 1.1 11 62-72 64-74 (81)
26 d1c52a_ a.3.1.1 (A:) Cytochrom 44.8 4.8 0.00035 23.3 1.6 12 61-72 73-84 (131)
27 d1wvec1 a.3.1.1 (C:602-675) p- 42.5 9.9 0.00072 20.4 2.7 12 61-72 55-66 (74)
28 d1cnoa_ a.3.1.1 (A:) Cytochrom 38.3 7.5 0.00055 20.6 1.7 12 61-72 65-76 (86)
29 d1ng6a_ a.182.1.1 (A:) Hypothe 36.2 9.5 0.00069 24.0 2.1 17 55-73 89-105 (148)
30 d2gc4d1 a.3.1.1 (D:1-147) Cyto 36.0 13 0.00097 22.3 2.8 20 53-72 98-117 (147)
31 d1kb0a1 a.3.1.6 (A:579-675) Qu 35.6 5.5 0.0004 22.0 0.8 12 61-72 74-85 (97)
32 d1e29a_ a.3.1.1 (A:) Photosyst 34.4 14 0.001 21.0 2.5 16 57-72 101-116 (135)
33 d1mz4a_ a.3.1.1 (A:) Cytochrom 33.6 13 0.00097 20.8 2.3 17 56-72 100-116 (131)
34 d1saca_ b.29.1.5 (A:) Serum am 33.4 13 0.00096 22.1 2.4 20 59-78 160-179 (204)
35 d2gbsa1 b.122.1.8 (A:2-137) Hy 33.2 7.4 0.00054 24.7 1.2 15 61-75 120-135 (136)
36 d1w0ta_ a.4.1.4 (A:) DNA-bindi 32.6 12 0.00088 19.5 1.9 16 59-74 1-16 (52)
37 d1kv9a1 a.3.1.6 (A:561-664) Qu 32.0 11 0.00077 20.9 1.7 12 61-72 78-89 (104)
38 d1nira1 a.3.1.2 (A:6-117) N-te 31.4 19 0.0014 20.7 2.8 12 61-72 90-101 (112)
39 d1h1oa2 a.3.1.4 (A:94-183) Cyt 31.2 11 0.0008 21.5 1.7 12 61-72 73-84 (90)
40 d1h32b_ a.3.1.1 (B:) Mono-heme 30.1 19 0.0014 20.4 2.7 18 55-72 113-130 (138)
41 d1qksa1 a.3.1.2 (A:9-135) N-te 30.0 20 0.0015 21.2 2.8 22 51-72 92-116 (127)
42 d1zcea1 b.122.1.8 (A:2-147) Hy 27.9 11 0.00078 24.1 1.3 16 62-77 123-139 (146)
43 d1m70a2 a.3.1.4 (A:93-190) Cyt 27.7 13 0.00091 21.1 1.5 12 61-72 80-91 (98)
44 d1lfma_ a.3.1.1 (A:) Mitochond 27.5 24 0.0018 18.4 2.6 15 58-72 81-95 (103)
45 d1ykia1 d.90.1.1 (A:2-217) Oxy 26.7 16 0.0012 21.2 1.9 14 61-74 19-32 (216)
46 d2lhba_ a.1.1.2 (A:) Lamprey g 25.0 16 0.0012 21.4 1.7 13 60-72 8-20 (149)
47 d1b26a2 c.58.1.1 (A:4-178) Glu 24.5 12 0.00085 24.8 1.0 23 51-73 99-121 (175)
48 d2b67a1 d.90.1.1 (A:1-201) Hyp 24.2 20 0.0015 21.1 2.0 12 61-72 19-30 (201)
49 d1w0ua_ a.4.1.4 (A:) Telomeric 24.1 21 0.0015 18.6 1.9 16 59-74 1-16 (55)
50 d1ee8a1 a.156.1.2 (A:122-210) 24.0 28 0.002 19.7 2.6 19 54-72 50-70 (89)
51 d1noxa_ d.90.1.1 (A:) NADH oxi 23.3 22 0.0016 20.8 2.0 13 61-73 21-33 (200)
52 d2ppqa1 d.144.1.6 (A:5-320) Ho 23.0 20 0.0014 22.3 1.9 12 60-71 250-261 (316)
53 d1vfra_ d.90.1.1 (A:) Flavin r 21.7 22 0.0016 20.6 1.8 12 62-73 22-33 (217)
54 d2ifaa1 d.90.1.1 (A:2-200) Hyp 21.6 21 0.0015 21.1 1.7 12 62-73 21-32 (199)
55 d3c2ca_ a.3.1.1 (A:) Cytochrom 21.5 22 0.0016 19.3 1.7 12 61-72 94-105 (112)
56 d1cp2a_ c.37.1.10 (A:) Nitroge 21.0 29 0.0021 21.2 2.3 20 51-72 246-265 (269)
57 d2c8sa1 a.3.1.1 (A:24-172) Cyt 20.0 40 0.0029 19.9 2.9 23 50-72 79-102 (149)
No 1
>d1kx7a_ a.3.1.1 (A:) Mono-heme c-type cytochrome ScyA {Shewanella putrefaciens [TaxId: 24]}
Probab=79.14 E-value=0.79 Score=25.07 Aligned_cols=23 Identities=17% Similarity=0.329 Sum_probs=16.0
Q ss_pred cCccccCCCC--cccCCHHHHHHHH
Q 034904 50 VGGKASLQPK--RTPVSNREIEAIM 72 (79)
Q Consensus 50 vgGkASlqPk--RtpvS~~EIEAIl 72 (79)
..|+..+-|. ..-|||+||++|+
T Consensus 50 ~~g~~~mp~~g~~~~Lsd~ei~~v~ 74 (81)
T d1kx7a_ 50 KTGLNAMPPGGMCTDCTDEDYKAAI 74 (81)
T ss_dssp HHCCSSSCTTTTCSSCCHHHHHHHH
T ss_pred HhhcccccccccccCCCHHHHHHHH
Confidence 3455555443 4579999999986
No 2
>d1cc5a_ a.3.1.1 (A:) Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]}
Probab=78.97 E-value=0.81 Score=25.05 Aligned_cols=22 Identities=27% Similarity=0.495 Sum_probs=15.0
Q ss_pred CccccCCCC--cccCCHHHHHHHH
Q 034904 51 GGKASLQPK--RTPVSNREIEAIM 72 (79)
Q Consensus 51 gGkASlqPk--RtpvS~~EIEAIl 72 (79)
.|+..+.|. +..||++||++|+
T Consensus 54 ~~~~~MP~~g~~~~Lsd~ei~~vv 77 (83)
T d1cc5a_ 54 SGLNAMPPKGTCADCSDDELKAAI 77 (83)
T ss_dssp HCBTTBCSSSSCSSCCHHHHHHHH
T ss_pred hcccccccccccCCCCHHHHHHHH
Confidence 344444442 4579999999986
No 3
>d1dzfa2 d.78.1.1 (A:144-215) Eukaryotic RPB5 C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=77.01 E-value=0.52 Score=27.46 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=17.8
Q ss_pred ccCCCCcccCCHHHHHHHHh
Q 034904 54 ASLQPKRTPVSNREIEAIMM 73 (79)
Q Consensus 54 ASlqPkRtpvS~~EIEAIll 73 (79)
-.|+||-+.|++||++.||-
T Consensus 4 H~lVPkH~~l~~eE~~~il~ 23 (72)
T d1dzfa2 4 HELVPKHIRLSSDEKRELLK 23 (72)
T ss_dssp STTSCEEEECCHHHHHHHHH
T ss_pred CccCCCeEEcCHHHHHHHHH
Confidence 36899999999999999984
No 4
>d1ctja_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Monoraphidium braunii [TaxId: 34112]}
Probab=74.72 E-value=1.1 Score=24.39 Aligned_cols=22 Identities=18% Similarity=0.339 Sum_probs=15.7
Q ss_pred CccccCCCCcccCCHHHHHHHH
Q 034904 51 GGKASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 51 gGkASlqPkRtpvS~~EIEAIl 72 (79)
.|+..+-+....||++||++|+
T Consensus 56 ~g~~~Mp~~~~~Lsd~ei~~v~ 77 (89)
T d1ctja_ 56 NGKGAMPAWDGRLDEDEIAGVA 77 (89)
T ss_dssp HCBTTBCCCBTTBCHHHHHHHH
T ss_pred cCcCCCCccCCCCCHHHHHHHH
Confidence 3444455555679999999986
No 5
>d1gksa_ a.3.1.1 (A:) Cytochrome c551 {Ectothiorhodospira halophila [TaxId: 1053]}
Probab=70.64 E-value=1.5 Score=24.30 Aligned_cols=24 Identities=8% Similarity=0.266 Sum_probs=18.9
Q ss_pred ccCccccCCCCcccCCHHHHHHHH
Q 034904 49 AVGGKASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 49 avgGkASlqPkRtpvS~~EIEAIl 72 (79)
...|+..+-|.-.-||++||++|+
T Consensus 48 ~~~g~~~MPa~g~~LsdeeI~~v~ 71 (78)
T d1gksa_ 48 TLAGKGAMPAYDGRADREDLVKAI 71 (78)
T ss_dssp HHHCBTTBCCCBTTBCHHHHHHHH
T ss_pred hhhcccccCccCCCCCHHHHHHHH
Confidence 345667777777779999999986
No 6
>d1eika_ d.78.1.1 (A:) RNA polymerase subunit RBP5 (RNA polymerase subunit H) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=70.59 E-value=0.75 Score=27.04 Aligned_cols=20 Identities=15% Similarity=0.335 Sum_probs=17.7
Q ss_pred ccCCCCcccCCHHHHHHHHh
Q 034904 54 ASLQPKRTPVSNREIEAIMM 73 (79)
Q Consensus 54 ASlqPkRtpvS~~EIEAIll 73 (79)
-.|+||-+.|+++|++.+|-
T Consensus 8 H~lVPkH~il~~ee~~~~l~ 27 (77)
T d1eika_ 8 HQLVPEHVILNESEAKRVLK 27 (77)
T ss_dssp SSSCCEEEEECHHHHHHHHH
T ss_pred cccCCCeEEcCHHHHHHHHH
Confidence 46899999999999999874
No 7
>d1ls9a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Green alga (Cladophora glomerata) [TaxId: 162068]}
Probab=69.79 E-value=1.8 Score=23.31 Aligned_cols=21 Identities=24% Similarity=0.424 Sum_probs=15.2
Q ss_pred ccccCCCCcccCCHHHHHHHH
Q 034904 52 GKASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 52 GkASlqPkRtpvS~~EIEAIl 72 (79)
|+..+.+-...||++||++|+
T Consensus 59 g~~~MP~~~~~Lsdeei~~l~ 79 (91)
T d1ls9a_ 59 GKGAMPAWADRLDEDDIEAVS 79 (91)
T ss_dssp CBTTBCCCTTTSCHHHHHHHH
T ss_pred CcCCCcccccCCCHHHHHHHH
Confidence 444455555679999999986
No 8
>d1f1fa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Arthrospira maxima [TaxId: 129910]}
Probab=68.98 E-value=1.9 Score=22.95 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=15.3
Q ss_pred CccccCCCCcccCCHHHHHHHH
Q 034904 51 GGKASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 51 gGkASlqPkRtpvS~~EIEAIl 72 (79)
.|+..+-+-...||++||++|+
T Consensus 56 ~g~~~Mp~~~~~Lsd~ei~~v~ 77 (88)
T d1f1fa_ 56 NGKNAMPGFNGRLSPLQIEDVA 77 (88)
T ss_dssp HCBTTBCCCTTTSCHHHHHHHH
T ss_pred cCcCCCCcccCCCCHHHHHHHH
Confidence 3444454545569999999986
No 9
>d1cyja_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=67.66 E-value=2.1 Score=23.15 Aligned_cols=21 Identities=29% Similarity=0.457 Sum_probs=14.5
Q ss_pred ccccCCCCcccCCHHHHHHHH
Q 034904 52 GKASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 52 GkASlqPkRtpvS~~EIEAIl 72 (79)
|+..+.+-.-.||++||++|+
T Consensus 56 g~~~mp~~~~~Lsd~ei~~v~ 76 (90)
T d1cyja_ 56 GKGAMPAWADRLSEEEIQAVA 76 (90)
T ss_dssp CBTTBCCCTTTSCHHHHHHHH
T ss_pred CcCCCCcccCCCCHHHHHHHH
Confidence 333444445569999999986
No 10
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.30 E-value=1.4 Score=26.47 Aligned_cols=18 Identities=28% Similarity=0.229 Sum_probs=15.5
Q ss_pred ccCCHHHHHHHHhccccc
Q 034904 61 TPVSNREIEAIMMGFTEE 78 (79)
Q Consensus 61 tpvS~~EIEAIllGG~~~ 78 (79)
..||.+||..|+.+||.+
T Consensus 164 raLs~~EI~~l~~~g~~~ 181 (206)
T d1b09a_ 164 FVLSPDEINTIYLGGPFS 181 (206)
T ss_dssp SCCCHHHHHHHHHTCCCC
T ss_pred ccCCHHHHHHHHhCCCCC
Confidence 479999999999998754
No 11
>d1c53a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Desulfovibrio vulgaris, different strains [TaxId: 881]}
Probab=64.11 E-value=1.6 Score=23.16 Aligned_cols=17 Identities=18% Similarity=0.241 Sum_probs=12.7
Q ss_pred CCCCcccCCHHHHHHHH
Q 034904 56 LQPKRTPVSNREIEAIM 72 (79)
Q Consensus 56 lqPkRtpvS~~EIEAIl 72 (79)
+.+--.-||++||++|.
T Consensus 57 Mp~~~~~Lsd~ei~~l~ 73 (79)
T d1c53a_ 57 MTNLVKRYSDEEMKAMA 73 (79)
T ss_pred cHHHHhcCCHHHHHHHH
Confidence 44444569999999986
No 12
>d1h1oa1 a.3.1.4 (A:12-93) Cytochrome c4 {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=62.81 E-value=1.8 Score=23.26 Aligned_cols=17 Identities=18% Similarity=0.352 Sum_probs=12.5
Q ss_pred CCCCcccCCHHHHHHHH
Q 034904 56 LQPKRTPVSNREIEAIM 72 (79)
Q Consensus 56 lqPkRtpvS~~EIEAIl 72 (79)
+.+-...||++||++|.
T Consensus 53 M~~~~~~LSd~eI~~la 69 (82)
T d1h1oa1 53 MWPVAQALDSAKITALA 69 (82)
T ss_dssp THHHHHTCCHHHHHHHH
T ss_pred chHHHhhCCHHHHHHHH
Confidence 33444579999999985
No 13
>d1gdva_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Red alga (Porphyra yezoensis) [TaxId: 2788]}
Probab=62.74 E-value=3 Score=22.14 Aligned_cols=22 Identities=18% Similarity=0.297 Sum_probs=15.9
Q ss_pred CccccCCCCcccCCHHHHHHHH
Q 034904 51 GGKASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 51 gGkASlqPkRtpvS~~EIEAIl 72 (79)
.|+..+-+.-..||++||.+|+
T Consensus 53 ~g~~~Mp~~~~~Lsd~ei~~v~ 74 (85)
T d1gdva_ 53 NGKNAMPAFGGRLVDEDIEDAA 74 (85)
T ss_dssp HCBTTBCCCTTTSCHHHHHHHH
T ss_pred cCCCCCCcccCCCCHHHHHHHH
Confidence 4444555555679999999986
No 14
>d1c6sa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Cyanobacterium (Synechococcus elongatus) [TaxId: 32046]}
Probab=61.31 E-value=2.4 Score=22.71 Aligned_cols=22 Identities=14% Similarity=0.329 Sum_probs=14.9
Q ss_pred CccccCCCCcccCCHHHHHHHH
Q 034904 51 GGKASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 51 gGkASlqPkRtpvS~~EIEAIl 72 (79)
.|...+-+..-.||++||++|+
T Consensus 53 ~g~~~mp~~~~~Ls~~ei~~v~ 74 (87)
T d1c6sa_ 53 HGKNAMPAFAGRLTDEQIQDVA 74 (87)
T ss_dssp SCBTTBCCCTTTSCSHHHHHHH
T ss_pred cCccccccccCCCCHHHHHHHH
Confidence 3444444444459999999986
No 15
>d1c75a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Bacillus pasteurii [TaxId: 1474]}
Probab=60.34 E-value=3.3 Score=22.39 Aligned_cols=20 Identities=20% Similarity=0.300 Sum_probs=14.3
Q ss_pred CccccCCCCcccCCHHHHHHHH
Q 034904 51 GGKASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 51 gGkASlqPkRtpvS~~EIEAIl 72 (79)
.|+..+-+. .||++||++|.
T Consensus 45 ~G~~~MP~~--~Ls~~ei~~i~ 64 (71)
T d1c75a_ 45 NGQGGMPGG--IAKGAEAEAVA 64 (71)
T ss_dssp HCBTTBCSC--SSCHHHHHHHH
T ss_pred hCcCCCCCC--CCCHHHHHHHH
Confidence 355555443 59999999985
No 16
>d1cora_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas stutzeri [TaxId: 316]}
Probab=60.07 E-value=2.1 Score=23.01 Aligned_cols=11 Identities=27% Similarity=0.579 Sum_probs=9.8
Q ss_pred cCCHHHHHHHH
Q 034904 62 PVSNREIEAIM 72 (79)
Q Consensus 62 pvS~~EIEAIl 72 (79)
.||++||++|.
T Consensus 65 ~lsdeei~~la 75 (82)
T d1cora_ 65 PVTEEEAKILA 75 (82)
T ss_dssp SCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 49999999986
No 17
>d1ynra1 a.3.1.1 (A:1-80) Cytochrome c552 {Hydrogenobacter thermophilus [TaxId: 940]}
Probab=57.26 E-value=2.5 Score=22.84 Aligned_cols=11 Identities=18% Similarity=0.350 Sum_probs=9.9
Q ss_pred cCCHHHHHHHH
Q 034904 62 PVSNREIEAIM 72 (79)
Q Consensus 62 pvS~~EIEAIl 72 (79)
.||++||++|+
T Consensus 63 ~lsd~ei~~l~ 73 (80)
T d1ynra1 63 NVTDAEAKQLA 73 (80)
T ss_dssp SCCHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 59999999986
No 18
>d1fcdc2 a.3.1.4 (C:81-174) Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=55.71 E-value=2.6 Score=23.17 Aligned_cols=17 Identities=12% Similarity=0.251 Sum_probs=13.4
Q ss_pred CCCCcccCCHHHHHHHH
Q 034904 56 LQPKRTPVSNREIEAIM 72 (79)
Q Consensus 56 lqPkRtpvS~~EIEAIl 72 (79)
+.+--..||++||++|.
T Consensus 71 M~~~~~~LSd~di~ala 87 (94)
T d1fcdc2 71 LRELLKAEGDAGLDALF 87 (94)
T ss_dssp HHTTGGGSTHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 44555689999999985
No 19
>d1nz8a_ d.58.42.1 (A:) N-utilization substance G protein NusG, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=54.86 E-value=5 Score=23.98 Aligned_cols=14 Identities=29% Similarity=0.603 Sum_probs=12.3
Q ss_pred CcccCCHHHHHHHH
Q 034904 59 KRTPVSNREIEAIM 72 (79)
Q Consensus 59 kRtpvS~~EIEAIl 72 (79)
+-+||+++||+.||
T Consensus 99 ~P~pv~~~Ei~~il 112 (119)
T d1nz8a_ 99 RPVPLSPDEVRHIL 112 (119)
T ss_dssp SSCBCCHHHHHHHH
T ss_pred ccccCCHHHHHHHH
Confidence 34899999999998
No 20
>d1fcdc1 a.3.1.4 (C:1-80) Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=53.45 E-value=3.1 Score=22.28 Aligned_cols=12 Identities=17% Similarity=0.230 Sum_probs=10.3
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
..||++||++|.
T Consensus 59 ~~Lsd~ei~~la 70 (80)
T d1fcdc1 59 KGYSTADFEKMA 70 (80)
T ss_dssp TTSCHHHHHHHH
T ss_pred ccCCHHHHHHHH
Confidence 459999999985
No 21
>d351ca_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=53.35 E-value=3.3 Score=22.21 Aligned_cols=11 Identities=27% Similarity=0.456 Sum_probs=9.8
Q ss_pred cCCHHHHHHHH
Q 034904 62 PVSNREIEAIM 72 (79)
Q Consensus 62 pvS~~EIEAIl 72 (79)
.||++||++|.
T Consensus 65 ~lsd~ei~~la 75 (82)
T d351ca_ 65 AVSDDEAQTLA 75 (82)
T ss_dssp SCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 49999999985
No 22
>d1m1ha2 d.58.42.1 (A:5-50,A:132-186) N-utilization substance G protein NusG, N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=50.87 E-value=2.6 Score=25.35 Aligned_cols=13 Identities=23% Similarity=0.636 Sum_probs=11.4
Q ss_pred cccCCHHHHHHHH
Q 034904 60 RTPVSNREIEAIM 72 (79)
Q Consensus 60 RtpvS~~EIEAIl 72 (79)
=+|||++||+.|+
T Consensus 84 P~pl~~~Ev~~il 96 (101)
T d1m1ha2 84 PVPLKEEEVQNIL 96 (101)
T ss_dssp ECEECHHHHHHHH
T ss_pred cCcCCHHHHHHHH
Confidence 4699999999987
No 23
>d1m70a1 a.3.1.4 (A:1-92) Cytochrome c4 {Pseudomonas stutzeri [TaxId: 316]}
Probab=49.86 E-value=6.6 Score=20.63 Aligned_cols=17 Identities=24% Similarity=0.491 Sum_probs=12.2
Q ss_pred CCCCcccCCHHHHHHHH
Q 034904 56 LQPKRTPVSNREIEAIM 72 (79)
Q Consensus 56 lqPkRtpvS~~EIEAIl 72 (79)
+.+--..||++||++|.
T Consensus 66 Mp~~~~~Lsd~ei~dl~ 82 (92)
T d1m70a1 66 MTGMLDPLSDQDLEDIA 82 (92)
T ss_dssp GTTTTTTCCHHHHHHHH
T ss_pred hHHHHhhCCHHHHHHHH
Confidence 33333469999999986
No 24
>d1f1ca_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Arthrospira maxima [TaxId: 129910]}
Probab=48.55 E-value=4 Score=22.97 Aligned_cols=11 Identities=9% Similarity=0.302 Sum_probs=9.8
Q ss_pred cCCHHHHHHHH
Q 034904 62 PVSNREIEAIM 72 (79)
Q Consensus 62 pvS~~EIEAIl 72 (79)
-||||||.+|+
T Consensus 104 ~Lsdedi~ai~ 114 (129)
T d1f1ca_ 104 NISEDDLYNVA 114 (129)
T ss_dssp SCCHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 49999999986
No 25
>d1a56a_ a.3.1.1 (A:) Cytochrome c552 {Nitrosomonas europaea [TaxId: 915]}
Probab=45.78 E-value=3.6 Score=22.09 Aligned_cols=11 Identities=27% Similarity=0.422 Sum_probs=9.8
Q ss_pred cCCHHHHHHHH
Q 034904 62 PVSNREIEAIM 72 (79)
Q Consensus 62 pvS~~EIEAIl 72 (79)
.||++||++|.
T Consensus 64 ~Lsd~ei~~l~ 74 (81)
T d1a56a_ 64 NVSDADAKALA 74 (81)
T ss_dssp SSSSHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 49999999986
No 26
>d1c52a_ a.3.1.1 (A:) Cytochrome c552 {Thermus thermophilus [TaxId: 274]}
Probab=44.85 E-value=4.8 Score=23.29 Aligned_cols=12 Identities=25% Similarity=0.578 Sum_probs=10.5
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
..||++||.+|+
T Consensus 73 ~~LsD~eI~av~ 84 (131)
T d1c52a_ 73 AQLKDEEIAAVL 84 (131)
T ss_dssp TTSCHHHHHHHH
T ss_pred cCCCHHHHHHHH
Confidence 359999999997
No 27
>d1wvec1 a.3.1.1 (C:602-675) p-Cresol methylhydroxylase, cytochrome c subunit {Pseudomonas putida [TaxId: 303]}
Probab=42.45 E-value=9.9 Score=20.43 Aligned_cols=12 Identities=8% Similarity=0.279 Sum_probs=10.3
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
..||++||++|.
T Consensus 55 ~~lsd~ei~~l~ 66 (74)
T d1wvec1 55 SYVDDESLTQVA 66 (74)
T ss_dssp TTSCHHHHHHHH
T ss_pred ccCCHHHHHHHH
Confidence 469999999985
No 28
>d1cnoa_ a.3.1.1 (A:) Cytochrome c552 {Pseudomonas nautica [TaxId: 2743]}
Probab=38.34 E-value=7.5 Score=20.62 Aligned_cols=12 Identities=25% Similarity=0.470 Sum_probs=10.2
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
..||++||++|.
T Consensus 65 ~~Lsd~di~~la 76 (86)
T d1cnoa_ 65 TALSDADIANLA 76 (86)
T ss_dssp TTCCHHHHHHHH
T ss_pred ccCCHHHHHHHH
Confidence 469999999985
No 29
>d1ng6a_ a.182.1.1 (A:) Hypothetical protein YqeY {Bacillus subtilis [TaxId: 1423]}
Probab=36.19 E-value=9.5 Score=23.98 Aligned_cols=17 Identities=24% Similarity=0.434 Sum_probs=13.6
Q ss_pred cCCCCcccCCHHHHHHHHh
Q 034904 55 SLQPKRTPVSNREIEAIMM 73 (79)
Q Consensus 55 SlqPkRtpvS~~EIEAIll 73 (79)
+.+|+ .+|++||++|+-
T Consensus 89 ~yLP~--~lseeEl~~~v~ 105 (148)
T d1ng6a_ 89 VYLPE--QLSEEELRTIVN 105 (148)
T ss_dssp GGSCC--CCCHHHHHHHHH
T ss_pred HHccc--cCCHHHHHHHHH
Confidence 35676 899999999875
No 30
>d2gc4d1 a.3.1.1 (D:1-147) Cytochrome c551 {Paracoccus denitrificans [TaxId: 266]}
Probab=36.02 E-value=13 Score=22.29 Aligned_cols=20 Identities=15% Similarity=0.217 Sum_probs=16.8
Q ss_pred cccCCCCcccCCHHHHHHHH
Q 034904 53 KASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 53 kASlqPkRtpvS~~EIEAIl 72 (79)
...+.|....||++||.+|+
T Consensus 98 ~~~Mp~~~~~Ls~~ei~~lv 117 (147)
T d2gc4d1 98 TGQMGPMWGSLTLDEMLRTM 117 (147)
T ss_dssp STTCCCCTTTSCHHHHHHHH
T ss_pred cccccccccCCCHHHHHHHH
Confidence 45678888889999999986
No 31
>d1kb0a1 a.3.1.6 (A:579-675) Quinoprotein alcohol dehydrogenase, C-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=35.55 E-value=5.5 Score=22.02 Aligned_cols=12 Identities=17% Similarity=0.398 Sum_probs=10.3
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
.-||++||++|+
T Consensus 74 ~~Ls~~ei~~i~ 85 (97)
T d1kb0a1 74 GKLSGDDVESLK 85 (97)
T ss_dssp TTSCTTHHHHHH
T ss_pred cCCCHHHHHHHH
Confidence 359999999986
No 32
>d1e29a_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Synechocystis sp., pcc 6803 [TaxId: 1143]}
Probab=34.39 E-value=14 Score=20.96 Aligned_cols=16 Identities=13% Similarity=0.214 Sum_probs=12.1
Q ss_pred CCCcccCCHHHHHHHH
Q 034904 57 QPKRTPVSNREIEAIM 72 (79)
Q Consensus 57 qPkRtpvS~~EIEAIl 72 (79)
-|.-.-||++||.+|+
T Consensus 101 mp~~~~Lsdedi~~va 116 (135)
T d1e29a_ 101 YPEMRNYTEDDIFDVA 116 (135)
T ss_dssp CGGGTTCCHHHHHHHH
T ss_pred CCccCCCCHHHHHHHH
Confidence 3444469999999986
No 33
>d1mz4a_ a.3.1.1 (A:) Cytochrome c550 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=33.65 E-value=13 Score=20.75 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=12.5
Q ss_pred CCCCcccCCHHHHHHHH
Q 034904 56 LQPKRTPVSNREIEAIM 72 (79)
Q Consensus 56 lqPkRtpvS~~EIEAIl 72 (79)
..|.=.-|||+||.+|+
T Consensus 100 ~MP~f~~Lsdeei~av~ 116 (131)
T d1mz4a_ 100 IFPKMRNLTEKDLVAIA 116 (131)
T ss_dssp TSGGGTTCCHHHHHHHH
T ss_pred CCCcccCCCHHHHHHHH
Confidence 34543349999999986
No 34
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.40 E-value=13 Score=22.12 Aligned_cols=20 Identities=10% Similarity=0.003 Sum_probs=16.0
Q ss_pred CcccCCHHHHHHHHhccccc
Q 034904 59 KRTPVSNREIEAIMMGFTEE 78 (79)
Q Consensus 59 kRtpvS~~EIEAIllGG~~~ 78 (79)
=...||++||.+++-+.|.+
T Consensus 160 ~~~aLs~~EI~~ly~~~~~~ 179 (204)
T d1saca_ 160 WDSVLPPENILSAYQGTPLP 179 (204)
T ss_dssp ESSCCCHHHHHHHHTTCCCC
T ss_pred EcccCCHHHHHHHHcCCCCC
Confidence 35689999999999886643
No 35
>d2gbsa1 b.122.1.8 (A:2-137) Hypothetical protein RPA0253 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=33.19 E-value=7.4 Score=24.68 Aligned_cols=15 Identities=33% Similarity=0.496 Sum_probs=10.2
Q ss_pred ccCCHHHHHHHH-hcc
Q 034904 61 TPVSNREIEAIM-MGF 75 (79)
Q Consensus 61 tpvS~~EIEAIl-lGG 75 (79)
+|||++|-+.|+ |||
T Consensus 120 ~PVt~~ew~~I~~L~g 135 (136)
T d2gbsa1 120 QPVTAEEWKLVCKMGG 135 (136)
T ss_dssp EEECHHHHHHHHHHTT
T ss_pred eeCCHHHHHHHHHhcC
Confidence 367788888776 444
No 36
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.61 E-value=12 Score=19.47 Aligned_cols=16 Identities=25% Similarity=0.154 Sum_probs=13.8
Q ss_pred CcccCCHHHHHHHHhc
Q 034904 59 KRTPVSNREIEAIMMG 74 (79)
Q Consensus 59 kRtpvS~~EIEAIllG 74 (79)
||.|-|+||=++++-|
T Consensus 1 kr~~WT~eED~~L~~~ 16 (52)
T d1w0ta_ 1 KRQAWLWEEDKNLRSG 16 (52)
T ss_dssp CCCCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
Confidence 6899999999988765
No 37
>d1kv9a1 a.3.1.6 (A:561-664) Quinoprotein alcohol dehydrogenase, C-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=31.96 E-value=11 Score=20.90 Aligned_cols=12 Identities=25% Similarity=0.404 Sum_probs=10.3
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
.-||++||.+|+
T Consensus 78 ~~Lsd~ei~~v~ 89 (104)
T d1kv9a1 78 DSLKPEEVEQIK 89 (104)
T ss_dssp TTCCHHHHHHHH
T ss_pred cCCCHHHHHHHH
Confidence 469999999986
No 38
>d1nira1 a.3.1.2 (A:6-117) N-terminal (heme c) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.40 E-value=19 Score=20.67 Aligned_cols=12 Identities=17% Similarity=0.274 Sum_probs=10.3
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
..||++||++|+
T Consensus 90 ~~Lsd~ei~~l~ 101 (112)
T d1nira1 90 GELSKEQITLMA 101 (112)
T ss_dssp TSSCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 369999999986
No 39
>d1h1oa2 a.3.1.4 (A:94-183) Cytochrome c4 {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=31.20 E-value=11 Score=21.51 Aligned_cols=12 Identities=0% Similarity=0.238 Sum_probs=10.3
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
..||++||++|.
T Consensus 73 ~~lsd~ei~~la 84 (90)
T d1h1oa2 73 KNITVAQMKDVA 84 (90)
T ss_dssp TTCCHHHHHHHH
T ss_pred HhCCHHHHHHHH
Confidence 579999999984
No 40
>d1h32b_ a.3.1.1 (B:) Mono-heme c-type cytochrome SoxX {Rhodovulum sulfidophilum [TaxId: 35806]}
Probab=30.09 E-value=19 Score=20.42 Aligned_cols=18 Identities=17% Similarity=0.183 Sum_probs=13.5
Q ss_pred cCCCCcccCCHHHHHHHH
Q 034904 55 SLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 55 SlqPkRtpvS~~EIEAIl 72 (79)
-.......||++||+.|+
T Consensus 113 ~~~~~~~~Lt~~ei~dlv 130 (138)
T d1h32b_ 113 IEGEIRPLMTAGQIEDVV 130 (138)
T ss_dssp CCSCCCCSSCHHHHHHHH
T ss_pred cccccccCCCHHHHHHHH
Confidence 344556679999999886
No 41
>d1qksa1 a.3.1.2 (A:9-135) N-terminal (heme c) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=29.98 E-value=20 Score=21.18 Aligned_cols=22 Identities=9% Similarity=0.111 Sum_probs=14.5
Q ss_pred Ccc-ccCCCCc--ccCCHHHHHHHH
Q 034904 51 GGK-ASLQPKR--TPVSNREIEAIM 72 (79)
Q Consensus 51 gGk-ASlqPkR--tpvS~~EIEAIl 72 (79)
.|. ..+-+.. ..||++||++|+
T Consensus 92 ~G~~~~MP~fg~~~~Lsd~ei~~l~ 116 (127)
T d1qksa1 92 YASPAGMPNWGTSGELSAEQVDLMA 116 (127)
T ss_dssp TCCCCCCTTTSCCCCCCHHHHHHHH
T ss_pred hcccccCcccccCCCCCHHHHHHHH
Confidence 343 3454444 359999999986
No 42
>d1zcea1 b.122.1.8 (A:2-147) Hypothetical protein Atu2648 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=27.92 E-value=11 Score=24.13 Aligned_cols=16 Identities=31% Similarity=0.428 Sum_probs=12.9
Q ss_pred cCCHHHHHHHH-hcccc
Q 034904 62 PVSNREIEAIM-MGFTE 77 (79)
Q Consensus 62 pvS~~EIEAIl-lGG~~ 77 (79)
|||++|.++|+ |||..
T Consensus 123 PVt~~ew~~I~~Lag~~ 139 (146)
T d1zcea1 123 PVTEEEYLEVCRMGGLA 139 (146)
T ss_dssp EECHHHHHHHHHHTTCS
T ss_pred ecCHHHHHHHHHhcCCC
Confidence 79999999997 67653
No 43
>d1m70a2 a.3.1.4 (A:93-190) Cytochrome c4 {Pseudomonas stutzeri [TaxId: 316]}
Probab=27.74 E-value=13 Score=21.08 Aligned_cols=12 Identities=42% Similarity=0.684 Sum_probs=10.2
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
..||++||++|.
T Consensus 80 ~~lsd~di~~la 91 (98)
T d1m70a2 80 AKLSNKDIEALS 91 (98)
T ss_dssp TTCCHHHHHHHH
T ss_pred HhCCHHHHHHHH
Confidence 469999999984
No 44
>d1lfma_ a.3.1.1 (A:) Mitochondrial cytochrome c {Bluefin tuna (Thunnus thynnus) [TaxId: 8237]}
Probab=27.49 E-value=24 Score=18.44 Aligned_cols=15 Identities=7% Similarity=-0.108 Sum_probs=11.1
Q ss_pred CCcccCCHHHHHHHH
Q 034904 58 PKRTPVSNREIEAIM 72 (79)
Q Consensus 58 PkRtpvS~~EIEAIl 72 (79)
|-..-+|++||++|+
T Consensus 81 ~~~~~ls~~ei~dvi 95 (103)
T d1lfma_ 81 IFAGIKKKGERQDLV 95 (103)
T ss_dssp CCCCCCSHHHHHHHH
T ss_pred CCCCCCCHHHHHHHH
Confidence 333356999999987
No 45
>d1ykia1 d.90.1.1 (A:2-217) Oxygen-insensitive NAD(P)H nitroreductase {Escherichia coli, minor form, NfnB [TaxId: 562]}
Probab=26.73 E-value=16 Score=21.20 Aligned_cols=14 Identities=14% Similarity=0.102 Sum_probs=11.9
Q ss_pred ccCCHHHHHHHHhc
Q 034904 61 TPVSNREIEAIMMG 74 (79)
Q Consensus 61 tpvS~~EIEAIllG 74 (79)
.||++|+||.||--
T Consensus 19 ~~V~~e~l~~il~~ 32 (216)
T d1ykia1 19 KKLTPEQAEQIKTL 32 (216)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 38999999999853
No 46
>d2lhba_ a.1.1.2 (A:) Lamprey globin {Sea lamprey (Petromyzon marinus) [TaxId: 7757]}
Probab=25.00 E-value=16 Score=21.43 Aligned_cols=13 Identities=31% Similarity=0.325 Sum_probs=11.1
Q ss_pred cccCCHHHHHHHH
Q 034904 60 RTPVSNREIEAIM 72 (79)
Q Consensus 60 RtpvS~~EIEAIl 72 (79)
.+|||.+|+++|.
T Consensus 8 ~~~Ls~~e~~~I~ 20 (149)
T d2lhba_ 8 VAPLSAAEKTKIR 20 (149)
T ss_dssp CCCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 5789999999884
No 47
>d1b26a2 c.58.1.1 (A:4-178) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=24.48 E-value=12 Score=24.81 Aligned_cols=23 Identities=26% Similarity=0.459 Sum_probs=19.1
Q ss_pred CccccCCCCcccCCHHHHHHHHh
Q 034904 51 GGKASLQPKRTPVSNREIEAIMM 73 (79)
Q Consensus 51 gGkASlqPkRtpvS~~EIEAIll 73 (79)
|||+.+.-.=..+|++|+|.|.-
T Consensus 99 GgKggi~~dP~~~s~~Eler~~r 121 (175)
T d1b26a2 99 GGKGGVRVDPKKLSRNELERLSR 121 (175)
T ss_dssp EEEEEEECCGGGSCHHHHHHHHH
T ss_pred cccceeecCCCCCCHHHHHHHHH
Confidence 78888877777899999998864
No 48
>d2b67a1 d.90.1.1 (A:1-201) Hypothetical oxidoreductase SP0622 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=24.19 E-value=20 Score=21.08 Aligned_cols=12 Identities=8% Similarity=0.335 Sum_probs=10.9
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
.||++++|+.|+
T Consensus 19 ~~v~~e~i~~il 30 (201)
T d2b67a1 19 KLVDPKDVRTAI 30 (201)
T ss_dssp CCCCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 589999999997
No 49
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.07 E-value=21 Score=18.59 Aligned_cols=16 Identities=25% Similarity=0.248 Sum_probs=13.6
Q ss_pred CcccCCHHHHHHHHhc
Q 034904 59 KRTPVSNREIEAIMMG 74 (79)
Q Consensus 59 kRtpvS~~EIEAIllG 74 (79)
||.+-|+||-++++-|
T Consensus 1 Kr~~WT~eEd~~L~~~ 16 (55)
T d1w0ua_ 1 KKQKWTVEESEWVKAG 16 (55)
T ss_dssp CCCCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
Confidence 6889999999988765
No 50
>d1ee8a1 a.156.1.2 (A:122-210) DNA repair protein MutM (Fpg) {Thermus thermophilus [TaxId: 274]}
Probab=23.96 E-value=28 Score=19.75 Aligned_cols=19 Identities=26% Similarity=0.452 Sum_probs=14.9
Q ss_pred ccCCCCcc--cCCHHHHHHHH
Q 034904 54 ASLQPKRT--PVSNREIEAIM 72 (79)
Q Consensus 54 ASlqPkRt--pvS~~EIEAIl 72 (79)
|.+.|.|+ -||++|++.+.
T Consensus 50 a~I~P~~~~~~Ls~~e~~~L~ 70 (89)
T d1ee8a1 50 ARLSPFRPARSLTEEEARRLY 70 (89)
T ss_dssp TTCCSSSBGGGCCHHHHHHHH
T ss_pred HHcCccchhhhCCHHHHHHHH
Confidence 56788887 79999998653
No 51
>d1noxa_ d.90.1.1 (A:) NADH oxidase {Thermus thermophilus, HB8 [TaxId: 274]}
Probab=23.27 E-value=22 Score=20.76 Aligned_cols=13 Identities=23% Similarity=0.424 Sum_probs=11.4
Q ss_pred ccCCHHHHHHHHh
Q 034904 61 TPVSNREIEAIMM 73 (79)
Q Consensus 61 tpvS~~EIEAIll 73 (79)
.||++++|+.|+-
T Consensus 21 ~~V~~e~i~~il~ 33 (200)
T d1noxa_ 21 DPVPEGLLREILE 33 (200)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 5899999999984
No 52
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=23.01 E-value=20 Score=22.33 Aligned_cols=12 Identities=42% Similarity=0.692 Sum_probs=9.3
Q ss_pred cccCCHHHHHHH
Q 034904 60 RTPVSNREIEAI 71 (79)
Q Consensus 60 RtpvS~~EIEAI 71 (79)
..|||++|++++
T Consensus 250 ~rpLs~~E~~~l 261 (316)
T d2ppqa1 250 VRPLSEAELEAL 261 (316)
T ss_dssp TSCCCHHHHHHH
T ss_pred cCCCCHHHHHHH
Confidence 358999998875
No 53
>d1vfra_ d.90.1.1 (A:) Flavin reductase P (NADPH:FMN oxidoreductase) {Vibrio fischeri [TaxId: 668]}
Probab=21.69 E-value=22 Score=20.58 Aligned_cols=12 Identities=17% Similarity=0.426 Sum_probs=10.9
Q ss_pred cCCHHHHHHHHh
Q 034904 62 PVSNREIEAIMM 73 (79)
Q Consensus 62 pvS~~EIEAIll 73 (79)
||++|.||.||-
T Consensus 22 ~V~~e~i~~il~ 33 (217)
T d1vfra_ 22 KVSQEDLAVLLE 33 (217)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 899999999984
No 54
>d2ifaa1 d.90.1.1 (A:2-200) Hypothetical protein Smu.260 {Streptococcus mutans [TaxId: 1309]}
Probab=21.55 E-value=21 Score=21.06 Aligned_cols=12 Identities=25% Similarity=0.409 Sum_probs=10.6
Q ss_pred cCCHHHHHHHHh
Q 034904 62 PVSNREIEAIMM 73 (79)
Q Consensus 62 pvS~~EIEAIll 73 (79)
||++++|+.||-
T Consensus 21 pV~~e~l~~il~ 32 (199)
T d2ifaa1 21 DLSKAELVALIQ 32 (199)
T ss_dssp SSCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 899999999874
No 55
>d3c2ca_ a.3.1.1 (A:) Cytochrome c2 {Rhodospirillum rubrum [TaxId: 1085]}
Probab=21.52 E-value=22 Score=19.32 Aligned_cols=12 Identities=25% Similarity=0.454 Sum_probs=10.2
Q ss_pred ccCCHHHHHHHH
Q 034904 61 TPVSNREIEAIM 72 (79)
Q Consensus 61 tpvS~~EIEAIl 72 (79)
..+|++||++|+
T Consensus 94 ~~ls~qdi~div 105 (112)
T d3c2ca_ 94 KLTKDDEIENVI 105 (112)
T ss_dssp CCCCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 368999999986
No 56
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=21.01 E-value=29 Score=21.21 Aligned_cols=20 Identities=20% Similarity=0.519 Sum_probs=15.3
Q ss_pred CccccCCCCcccCCHHHHHHHH
Q 034904 51 GGKASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 51 gGkASlqPkRtpvS~~EIEAIl 72 (79)
++..-.+| +|++.|++|.+|
T Consensus 246 ~~~~~~~p--~p~~~~~~~~~~ 265 (269)
T d1cp2a_ 246 ANELFVIP--KPMTQERLEEIL 265 (269)
T ss_dssp HCCCCBCC--CCCCHHHHHHHH
T ss_pred cCCCCCCC--CCCCHHHHHHHH
Confidence 34444567 799999999998
No 57
>d2c8sa1 a.3.1.1 (A:24-172) Cytochrome c-L (MoxG) {Methylobacterium extorquens [TaxId: 408]}
Probab=20.01 E-value=40 Score=19.87 Aligned_cols=23 Identities=17% Similarity=0.413 Sum_probs=15.7
Q ss_pred cCcc-ccCCCCcccCCHHHHHHHH
Q 034904 50 VGGK-ASLQPKRTPVSNREIEAIM 72 (79)
Q Consensus 50 vgGk-ASlqPkRtpvS~~EIEAIl 72 (79)
.+|. .-+-+....||++||.+|+
T Consensus 79 ~~G~~~~MP~~~~~Lsdeei~~iv 102 (149)
T d2c8sa1 79 FGGANGMMGPHNENLTPDEMLQTI 102 (149)
T ss_dssp HTCTTSSSCSCCCCSCHHHHHHHH
T ss_pred hccccccccccccCCCHHHHHHHH
Confidence 3443 3355555679999999986
Done!