BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034910
MAYSTSSSSSIASDLKAHLIKEVKSHEVAIAELNSLSSSRAVYQKNGNIFFRTTNQKATA
SEQKHLDVTKRKLEMLNIS

High Scoring Gene Products

Symbol, full name Information P value
AT1G49245 protein from Arabidopsis thaliana 8.2e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034910
        (79 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006175 - symbol:AT1G49245 species:3702 "Ara...   160  8.2e-12   1


>TAIR|locus:505006175 [details] [associations]
            symbol:AT1G49245 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006457 "protein folding"
            evidence=IEA] [GO:0016272 "prefoldin complex" evidence=IEA]
            [GO:0051082 "unfolded protein binding" evidence=IEA]
            InterPro:IPR002777 Pfam:PF01920 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006457 GO:GO:0016272
            InterPro:IPR009053 SUPFAM:SSF46579 EMBL:AY086151 EMBL:BT025018
            EMBL:AK227841 IPI:IPI00528922 RefSeq:NP_564542.1 UniGene:At.38267
            PaxDb:Q8LD83 PRIDE:Q8LD83 EnsemblPlants:AT1G49245.1 GeneID:841348
            KEGG:ath:AT1G49245 TAIR:At1g49245 eggNOG:NOG238922
            HOGENOM:HOG000029139 InParanoid:Q8LD83 OMA:QLDYAKS PhylomeDB:Q8LD83
            ProtClustDB:CLSN2688589 Genevestigator:Q8LD83 Uniprot:Q8LD83
        Length = 74

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 32/63 (50%), Positives = 45/63 (71%)

Query:    14 DLKAHLIKEVKSHEVAIAELNSLSSSRAVYQKNGNIFFRTTNQKATASEQKHLDVTKRKL 73
             D +  L KE+K  EV++ EL+SLSSSR++YQKNGN+FF T+ +KA  S QK LD  K ++
Sbjct:     8 DREFELEKEIKRQEVSLDELSSLSSSRSIYQKNGNLFFLTSAEKAKISAQKQLDYAKSEI 67

Query:    74 EML 76
               +
Sbjct:    68 NKI 70


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.123   0.316    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       79        69   0.00091  102 3  10 23  0.44    28
                                                     29  0.39    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  469 (50 KB)
  Total size of DFA:  93 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.50u 0.19s 12.69t   Elapsed:  00:00:00
  Total cpu time:  12.50u 0.19s 12.69t   Elapsed:  00:00:00
  Start:  Fri May 10 03:30:45 2013   End:  Fri May 10 03:30:45 2013

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