Your job contains 1 sequence.
>034912
MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGA
KYELPKYVLSEPTNLIREG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034912
(79 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2009685 - symbol:AT1G53400 species:3702 "Arabi... 304 4.5e-27 1
TAIR|locus:2171933 - symbol:AT5G45740 "AT5G45740" species... 280 1.6e-24 1
TAIR|locus:2015566 - symbol:AT1G16960 "AT1G16960" species... 266 4.8e-23 1
ZFIN|ZDB-GENE-040718-473 - symbol:ubtd2 "ubiquitin domain... 182 3.8e-14 1
ZFIN|ZDB-GENE-050913-62 - symbol:ubtd1b "ubiquitin domain... 182 3.8e-14 1
FB|FBgn0264712 - symbol:CG1172 species:7227 "Drosophila m... 181 4.9e-14 1
ZFIN|ZDB-GENE-070424-93 - symbol:ubtd1a "ubiquitin domain... 180 6.2e-14 1
UNIPROTKB|E1C4N1 - symbol:UBTD2 "Uncharacterized protein"... 178 1.0e-13 1
UNIPROTKB|Q5EAE3 - symbol:UBTD2 "Ubiquitin domain-contain... 178 1.0e-13 1
UNIPROTKB|E2QTA0 - symbol:UBTD2 "Uncharacterized protein"... 178 1.0e-13 1
UNIPROTKB|Q8WUN7 - symbol:UBTD2 "Ubiquitin domain-contain... 178 1.0e-13 1
UNIPROTKB|I3LIF4 - symbol:UBTD2 "Uncharacterized protein"... 178 1.0e-13 1
MGI|MGI:2444752 - symbol:Ubtd2 "ubiquitin domain containi... 178 1.0e-13 1
RGD|1305506 - symbol:Ubtd2 "ubiquitin domain containing 2... 178 1.0e-13 1
MGI|MGI:2385092 - symbol:Ubtd1 "ubiquitin domain containi... 173 3.4e-13 1
ASPGD|ASPL0000062956 - symbol:AN1173 species:162425 "Emer... 117 1.7e-06 1
POMBASE|SPAPB2B4.07 - symbol:SPAPB2B4.07 "ubiquitin famil... 104 2.1e-05 1
>TAIR|locus:2009685 [details] [associations]
symbol:AT1G53400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC008007 UniGene:At.25284 HOGENOM:HOG000241550
ProtClustDB:CLSN2681856 EMBL:AF370164 EMBL:AY059126 IPI:IPI00517841
PIR:H96573 RefSeq:NP_564630.1 ProteinModelPortal:Q9MAG2 SMR:Q9MAG2
IntAct:Q9MAG2 STRING:Q9MAG2 PRIDE:Q9MAG2 EnsemblPlants:AT1G53400.1
GeneID:841776 KEGG:ath:AT1G53400 TAIR:At1g53400 InParanoid:Q9MAG2
OMA:TICYDER PhylomeDB:Q9MAG2 ArrayExpress:Q9MAG2
Genevestigator:Q9MAG2 Uniprot:Q9MAG2
Length = 114
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 56/78 (71%), Positives = 60/78 (76%)
Query: 1 MQLRDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGA 60
M+LR+EFWDTAPHYGGRKEIWD IVDSAGVIVQ+ DLT+CYDERGA
Sbjct: 36 MKLREEFWDTAPHYGGRKEIWDALRAAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGA 95
Query: 61 KYELPKYVLSEPTNLIRE 78
KYELPKYVLSEPTNL E
Sbjct: 96 KYELPKYVLSEPTNLEEE 113
>TAIR|locus:2171933 [details] [associations]
symbol:AT5G45740 "AT5G45740" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 IPI:IPI00535040 RefSeq:NP_199386.2
UniGene:At.50507 DNASU:834613 EnsemblPlants:AT5G45740.1
GeneID:834613 KEGG:ath:AT5G45740 OMA:SSHARNE Uniprot:F4KEM2
Length = 118
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 49/76 (64%), Positives = 60/76 (78%)
Query: 3 LRDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKY 62
+R+EFWDT+PHYGG++EIW+ IVDSAGVIVQ+ DLT+C+DERGA+Y
Sbjct: 40 MREEFWDTSPHYGGQREIWEALRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARY 99
Query: 63 ELPKYVLSEPTNLIRE 78
ELP+YVLSEPTNLIRE
Sbjct: 100 ELPRYVLSEPTNLIRE 115
>TAIR|locus:2015566 [details] [associations]
symbol:AT1G16960 "AT1G16960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC051629 eggNOG:NOG278278 EMBL:BT014794 EMBL:BT015016
IPI:IPI00518501 PIR:C86305 RefSeq:NP_173140.1 UniGene:At.49890
ProteinModelPortal:Q9FZ55 SMR:Q9FZ55 EnsemblPlants:AT1G16960.1
GeneID:838267 KEGG:ath:AT1G16960 TAIR:At1g16960
HOGENOM:HOG000241550 InParanoid:Q9FZ55 OMA:TICYDEK PhylomeDB:Q9FZ55
ProtClustDB:CLSN2681856 Genevestigator:Q9FZ55 Uniprot:Q9FZ55
Length = 114
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 48/76 (63%), Positives = 58/76 (76%)
Query: 2 QLRDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXX-XIVDSAGVIVQSADLTICYDERGA 60
Q+R+EFWDTAPHYGG+KEIWD I++SAGVIVQ+ DLTICYDE+G+
Sbjct: 36 QMREEFWDTAPHYGGKKEIWDALRAAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGS 95
Query: 61 KYELPKYVLSEPTNLI 76
KYELPKYVL +P+NLI
Sbjct: 96 KYELPKYVLRDPSNLI 111
>ZFIN|ZDB-GENE-040718-473 [details] [associations]
symbol:ubtd2 "ubiquitin domain containing 2"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
ZFIN:ZDB-GENE-040718-473 InterPro:IPR019955 PROSITE:PS50053
GeneTree:ENSGT00390000006816 EMBL:CR762496 EMBL:CT027760
IPI:IPI00497975 Ensembl:ENSDART00000135256 ArrayExpress:F1QPG5
Bgee:F1QPG5 Uniprot:F1QPG5
Length = 244
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 36/79 (45%), Positives = 43/79 (54%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G
Sbjct: 58 RDEFWDTAPAFEGRKEIWDALKAAAQAFESNDHELAQAIIDGASITLPHGALTECYDELG 117
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y LS P N+I E
Sbjct: 118 NRYQLPVYCLSPPVNMIEE 136
>ZFIN|ZDB-GENE-050913-62 [details] [associations]
symbol:ubtd1b "ubiquitin domain containing 1b"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
ZFIN:ZDB-GENE-050913-62 InterPro:IPR019955 PROSITE:PS50053
EMBL:BC097167 IPI:IPI00510604 RefSeq:NP_001025436.1
UniGene:Dr.87242 ProteinModelPortal:Q4V8W7 SMR:Q4V8W7 GeneID:571832
KEGG:dre:571832 CTD:571832 eggNOG:NOG278278 HOGENOM:HOG000231205
HOVERGEN:HBG080179 InParanoid:Q4V8W7 OrthoDB:EOG40CHJ1
NextBio:20890714 Uniprot:Q4V8W7
Length = 227
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 37/79 (46%), Positives = 43/79 (54%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD IVD A + + LT CYDE G
Sbjct: 52 RDEFWDTAPAFEGRKEIWDALKAAAVALECSDHELAQAIVDGANITLPHGSLTECYDELG 111
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y L+ P NLI E
Sbjct: 112 NRYQLPVYCLAPPVNLISE 130
>FB|FBgn0264712 [details] [associations]
symbol:CG1172 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000626 Pfam:PF00240 EMBL:AE014297
InterPro:IPR019955 PROSITE:PS50053 HSSP:P54725 eggNOG:NOG278278
GeneTree:ENSGT00390000006816 OMA:GRPLADK EMBL:AY084174
RefSeq:NP_001246931.1 RefSeq:NP_649534.1 UniGene:Dm.5196 SMR:Q9VNB2
EnsemblMetazoa:FBtr0078792 EnsemblMetazoa:FBtr0309312
EnsemblMetazoa:FBtr0333810 GeneID:40647 KEGG:dme:Dmel_CG1172
UCSC:CG1172-RA FlyBase:FBgn0264712 InParanoid:Q9VNB2
OrthoDB:EOG4ZKH38 GenomeRNAi:40647 NextBio:819830 Uniprot:Q9VNB2
Length = 249
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 36/79 (45%), Positives = 45/79 (56%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD I+D A V V + LT CYDE G
Sbjct: 63 RDEFWDTAPAFDGRKEIWDALRAATTAAEGLDFQMAQAILDGANVSVPNGYLTECYDELG 122
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y++P Y LS P N+++E
Sbjct: 123 TQYKVPIYCLSYPINIVKE 141
>ZFIN|ZDB-GENE-070424-93 [details] [associations]
symbol:ubtd1a "ubiquitin domain containing 1a"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
ZFIN:ZDB-GENE-070424-93 InterPro:IPR019955 PROSITE:PS50053
HOGENOM:HOG000231205 HOVERGEN:HBG080179 OrthoDB:EOG40CHJ1
GeneTree:ENSGT00390000006816 EMBL:BX072537 IPI:IPI00807119
Ensembl:ENSDART00000084135 OMA:HNASENA Uniprot:B8A4E9
Length = 230
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 36/79 (45%), Positives = 42/79 (53%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXX----XXXXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD IVD A + + L CYDE G
Sbjct: 55 RDEFWDTAPAFDGRKEIWDALKAAAVAIECNDHQLAQAIVDGASITLPHGSLMECYDELG 114
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y LS P NL+ E
Sbjct: 115 NRYQLPAYCLSPPVNLVSE 133
>UNIPROTKB|E1C4N1 [details] [associations]
symbol:UBTD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
GO:GO:0005634 GO:GO:0005737 InterPro:IPR019955 PROSITE:PS50053
EMBL:AADN02028934 GeneTree:ENSGT00390000006816 OMA:GRPLADK
IPI:IPI00581063 Ensembl:ENSGALT00000004443 Uniprot:E1C4N1
Length = 234
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 35/79 (44%), Positives = 43/79 (54%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G
Sbjct: 54 RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y L+ P N+I E
Sbjct: 114 NRYQLPVYCLAPPINMIEE 132
>UNIPROTKB|Q5EAE3 [details] [associations]
symbol:UBTD2 "Ubiquitin domain-containing protein 2"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
InterPro:IPR019955 PROSITE:PS50053 eggNOG:NOG278278
HOGENOM:HOG000231205 HOVERGEN:HBG080179
GeneTree:ENSGT00390000006816 EMBL:BT020626 IPI:IPI00701655
RefSeq:NP_001015679.1 UniGene:Bt.63536 ProteinModelPortal:Q5EAE3
SMR:Q5EAE3 PRIDE:Q5EAE3 Ensembl:ENSBTAT00000049094 GeneID:541134
KEGG:bta:541134 CTD:92181 InParanoid:Q5EAE3 OMA:GRPLADK
OrthoDB:EOG4V9TRK NextBio:20879025 Uniprot:Q5EAE3
Length = 234
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 35/79 (44%), Positives = 43/79 (54%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G
Sbjct: 54 RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y L+ P N+I E
Sbjct: 114 NRYQLPVYCLAPPINMIEE 132
>UNIPROTKB|E2QTA0 [details] [associations]
symbol:UBTD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 GO:GO:0005634 GO:GO:0005737 InterPro:IPR019955
PROSITE:PS50053 GeneTree:ENSGT00390000006816 CTD:92181 OMA:GRPLADK
EMBL:AAEX03003012 RefSeq:XP_546238.2 Ensembl:ENSCAFT00000026639
GeneID:489120 KEGG:cfa:489120 NextBio:20862337 Uniprot:E2QTA0
Length = 234
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 35/79 (44%), Positives = 43/79 (54%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G
Sbjct: 54 RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y L+ P N+I E
Sbjct: 114 NRYQLPVYCLAPPINMIEE 132
>UNIPROTKB|Q8WUN7 [details] [associations]
symbol:UBTD2 "Ubiquitin domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC024561 EMBL:AC008671 eggNOG:NOG278278
HOGENOM:HOG000231205 HOVERGEN:HBG080179 CTD:92181 OMA:GRPLADK
OrthoDB:EOG4V9TRK EMBL:BC019910 EMBL:AF251700 IPI:IPI00157729
RefSeq:NP_689490.2 UniGene:Hs.131570 PDB:1TTN PDB:2KSN PDBsum:1TTN
PDBsum:2KSN ProteinModelPortal:Q8WUN7 SMR:Q8WUN7 STRING:Q8WUN7
PhosphoSite:Q8WUN7 DMDM:109896149 PaxDb:Q8WUN7 PRIDE:Q8WUN7
DNASU:92181 Ensembl:ENST00000393792 GeneID:92181 KEGG:hsa:92181
UCSC:uc003mbp.1 GeneCards:GC05M171573 HGNC:HGNC:24463 HPA:HPA035892
MIM:610174 neXtProt:NX_Q8WUN7 PharmGKB:PA162408325
InParanoid:Q8WUN7 ChiTaRS:UBTD2 EvolutionaryTrace:Q8WUN7
GenomeRNAi:92181 NextBio:77626 ArrayExpress:Q8WUN7 Bgee:Q8WUN7
CleanEx:HS_UBTD2 Genevestigator:Q8WUN7 GermOnline:ENSG00000168246
Uniprot:Q8WUN7
Length = 234
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 35/79 (44%), Positives = 43/79 (54%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G
Sbjct: 54 RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y L+ P N+I E
Sbjct: 114 NRYQLPVYCLAPPINMIEE 132
>UNIPROTKB|I3LIF4 [details] [associations]
symbol:UBTD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
GO:GO:0005634 GO:GO:0005737 InterPro:IPR019955 PROSITE:PS50053
GeneTree:ENSGT00390000006816 OMA:GRPLADK EMBL:CU914215
Ensembl:ENSSSCT00000032305 Uniprot:I3LIF4
Length = 211
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 35/79 (44%), Positives = 43/79 (54%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G
Sbjct: 31 RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 90
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y L+ P N+I E
Sbjct: 91 NRYQLPVYCLAPPINMIEE 109
>MGI|MGI:2444752 [details] [associations]
symbol:Ubtd2 "ubiquitin domain containing 2" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 MGI:MGI:2444752 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 InterPro:IPR019955 PROSITE:PS50053 EMBL:AL669844
EMBL:AL662780 eggNOG:NOG278278 HOGENOM:HOG000231205
HOVERGEN:HBG080179 GeneTree:ENSGT00390000006816 CTD:92181
OMA:GRPLADK OrthoDB:EOG4V9TRK EMBL:AK076953 EMBL:BC057026
IPI:IPI00420919 RefSeq:NP_776145.2 UniGene:Mm.260956
ProteinModelPortal:Q6PGH0 SMR:Q6PGH0 PhosphoSite:Q6PGH0
PaxDb:Q6PGH0 PRIDE:Q6PGH0 Ensembl:ENSMUST00000051053 GeneID:327900
KEGG:mmu:327900 UCSC:uc007ijr.1 InParanoid:A2AAY6 NextBio:397998
Bgee:Q6PGH0 CleanEx:MM_UBTD2 Genevestigator:Q6PGH0
GermOnline:ENSMUSG00000044949 Uniprot:Q6PGH0
Length = 234
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 35/79 (44%), Positives = 43/79 (54%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G
Sbjct: 54 RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y L+ P N+I E
Sbjct: 114 NRYQLPVYCLAPPINMIEE 132
>RGD|1305506 [details] [associations]
symbol:Ubtd2 "ubiquitin domain containing 2" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
RGD:1305506 GO:GO:0005634 GO:GO:0005737 InterPro:IPR019955
PROSITE:PS50053 GeneTree:ENSGT00390000006816 IPI:IPI00958106
Ensembl:ENSRNOT00000005486 Uniprot:F1LVF9
Length = 211
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 35/79 (44%), Positives = 43/79 (54%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G
Sbjct: 31 RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 90
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y L+ P N+I E
Sbjct: 91 NRYQLPVYCLAPPINMIEE 109
>MGI|MGI:2385092 [details] [associations]
symbol:Ubtd1 "ubiquitin domain containing 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 MGI:MGI:2385092 Prosite:PS00299 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019956 PRINTS:PR00348 eggNOG:NOG278278
HOGENOM:HOG000231205 HOVERGEN:HBG080179 OrthoDB:EOG40CHJ1
EMBL:AK078479 EMBL:BC016129 IPI:IPI00127935 RefSeq:NP_663475.1
UniGene:Mm.22948 ProteinModelPortal:Q91WB7 SMR:Q91WB7 STRING:Q91WB7
PhosphoSite:Q91WB7 PaxDb:Q91WB7 PRIDE:Q91WB7
Ensembl:ENSMUST00000026170 GeneID:226122 KEGG:mmu:226122
UCSC:uc008hmz.1 CTD:80019 GeneTree:ENSGT00390000006816
InParanoid:Q91WB7 OMA:HTQEGIE NextBio:378006 Bgee:Q91WB7
CleanEx:MM_UBTD1 Genevestigator:Q91WB7
GermOnline:ENSMUSG00000025171 Uniprot:Q91WB7
Length = 227
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 35/79 (44%), Positives = 42/79 (53%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
RDEFWDTAP + GRKEIWD I+D A + + L CYDE G
Sbjct: 51 RDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELG 110
Query: 60 AKYELPKYVLSEPTNLIRE 78
+Y+LP Y LS P NL+ E
Sbjct: 111 NRYQLPIYCLSPPVNLLLE 129
>ASPGD|ASPL0000062956 [details] [associations]
symbol:AN1173 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
EMBL:AACD01000016 EMBL:BN001308 InterPro:IPR019955 PROSITE:PS50053
eggNOG:NOG278278 OrthoDB:EOG4D2B01 RefSeq:XP_658777.1
ProteinModelPortal:Q5BE57 EnsemblFungi:CADANIAT00001453
GeneID:2876949 KEGG:ani:AN1173.2 HOGENOM:HOG000207374 OMA:NAPIRPH
Uniprot:Q5BE57
Length = 353
Score = 117 (46.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXX----XXXXIVDSAGVIVQSADLTI-CYDER 58
R EF++T GR E+WD I+D+AGV V + DL YDE+
Sbjct: 97 RTEFFET--RVTGRPEVWDALSAALQFMRNGDYETAQSIIDAAGVTVPTGDLCQGVYDEQ 154
Query: 59 GAKYELPKYVLSEPTNLI 76
G Y LP+ ++S+P N++
Sbjct: 155 GVLYRLPRCIVSDPVNIV 172
>POMBASE|SPAPB2B4.07 [details] [associations]
symbol:SPAPB2B4.07 "ubiquitin family protein, human
UBTD1 homolog" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
PomBase:SPAPB2B4.07 EMBL:CU329670 eggNOG:NOG278278
RefSeq:NP_593893.1 EnsemblFungi:SPAPB2B4.07.1 GeneID:2543223
KEGG:spo:SPAPB2B4.07 OrthoDB:EOG4D2B01 NextBio:20804245
Uniprot:Q9HDW4
Length = 239
Score = 104 (41.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/77 (36%), Positives = 36/77 (46%)
Query: 4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXXXIVDSAGVIVQSADLTI--------CY 55
R+EFW+T YGG KEIWD ++A + +ADLTI Y
Sbjct: 48 RNEFWETCWAYGGSKEIWDVLHKVVTLLYEGNA---EAATEMALAADLTIPENDISKGVY 104
Query: 56 DERGAKYELPKYVLSEP 72
D +G YE+PK V P
Sbjct: 105 DSKGTFYEIPKIVARIP 121
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.139 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 79 64 0.00091 102 3 11 22 0.46 28
29 0.44 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 533 (57 KB)
Total size of DFA: 103 KB (2071 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 6.00u 0.13s 6.13t Elapsed: 00:00:00
Total cpu time: 6.00u 0.13s 6.13t Elapsed: 00:00:00
Start: Fri May 10 03:30:57 2013 End: Fri May 10 03:30:57 2013