Query 034912
Match_columns 79
No_of_seqs 89 out of 109
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 12:22:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034912.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034912hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ksn_A Ubiquitin domain-contai 100.0 3.3E-47 1.1E-51 266.8 7.3 77 2-78 40-120 (137)
2 3kol_A Oxidoreductase, glyoxal 63.4 7.8 0.00027 23.0 3.3 33 31-63 108-147 (156)
3 4g6x_A Glyoxalase/bleomycin re 59.0 9.5 0.00033 23.5 3.2 34 31-64 108-148 (155)
4 3jz0_A Lincosamide nucleotidyl 55.1 8.9 0.00031 28.4 3.0 36 14-49 241-276 (287)
5 2y8d_A Erythrocyte membrane pr 53.5 3.4 0.00012 31.0 0.5 22 2-28 134-155 (306)
6 2wau_A VAR2CSA, erythrocyte me 52.9 3.5 0.00012 30.8 0.5 22 2-28 129-150 (302)
7 3l7t_A SMU.1112C, putative unc 52.7 16 0.00054 20.7 3.2 33 31-63 91-131 (134)
8 2pbe_A AAD6, aminoglycoside 6- 51.0 18 0.00062 26.3 4.1 36 13-48 234-269 (294)
9 3r6a_A Uncharacterized protein 50.0 14 0.00046 23.0 2.9 34 31-64 75-115 (144)
10 2xu0_A Erythrocyte membrane pr 49.9 4.1 0.00014 32.7 0.5 22 2-28 251-272 (487)
11 3kj0_B BCL-2-like protein 11; 49.3 7.2 0.00025 20.3 1.2 10 14-23 2-11 (27)
12 3f6q_A Integrin-linked protein 47.8 7.7 0.00026 24.0 1.4 29 16-44 1-30 (179)
13 3nze_A Putative transcriptiona 46.4 9.8 0.00033 27.1 2.0 22 22-43 237-266 (267)
14 3lvu_A ABC transporter, peripl 45.2 26 0.00089 23.4 3.9 37 29-68 98-134 (258)
15 3bqk_A Pfemp1 protein, erythro 45.2 7.2 0.00025 29.9 1.2 23 2-29 182-204 (360)
16 3u5c_S 40S ribosomal protein S 44.5 4.6 0.00016 27.7 -0.0 61 14-74 22-91 (146)
17 3rrc_A Duffy receptor; duffy b 43.9 5.9 0.0002 30.3 0.5 22 2-28 136-157 (317)
18 1f75_A Undecaprenyl pyrophosph 42.9 11 0.00037 27.6 1.8 17 13-29 147-163 (249)
19 3pvt_A Phenylacetic acid degra 42.7 18 0.00061 27.3 3.0 31 32-64 228-258 (311)
20 1sk7_A Hypothetical protein PA 42.6 38 0.0013 23.0 4.4 31 14-44 151-184 (198)
21 3r4q_A Lactoylglutathione lyas 41.1 22 0.00076 22.0 2.8 35 30-64 88-129 (160)
22 1nki_A Probable fosfomycin res 40.8 33 0.0011 20.2 3.5 35 30-64 72-111 (135)
23 3vuu_A Erythrocyte membrane pr 40.4 7.3 0.00025 29.2 0.5 23 2-29 149-171 (305)
24 3pam_A Transmembrane protein; 39.7 30 0.001 23.1 3.5 33 29-64 99-131 (259)
25 1wzd_A Heme oxygenase; electro 39.6 48 0.0016 22.6 4.6 38 6-44 159-199 (215)
26 3qas_B Undecaprenyl pyrophosph 39.5 14 0.00049 27.1 1.9 39 13-53 144-193 (253)
27 1vdl_A Ubiquitin carboxyl-term 39.4 35 0.0012 21.7 3.5 29 22-50 41-72 (80)
28 3bqx_A Glyoxalase-related enzy 39.3 50 0.0017 19.8 4.2 45 30-74 81-136 (150)
29 3vuv_A Erythrocyte membrane pr 39.0 7.9 0.00027 29.5 0.5 23 2-29 183-205 (339)
30 1j77_A HEMO, heme oxygenase; p 37.2 51 0.0017 22.6 4.4 31 15-45 147-180 (209)
31 1pq1_B BCL2-like protein 11; B 37.1 13 0.00045 20.1 1.1 7 17-23 3-9 (33)
32 3kv1_A Transcriptional repress 36.8 20 0.00069 25.4 2.4 22 21-42 234-263 (267)
33 4hc5_A Glyoxalase/bleomycin re 35.6 40 0.0014 19.1 3.2 33 31-63 89-129 (133)
34 3sgv_B Undecaprenyl pyrophosph 34.2 19 0.00066 26.6 1.9 17 13-29 144-160 (253)
35 3j20_O 30S ribosomal protein S 34.0 4.7 0.00016 27.8 -1.3 59 14-72 15-82 (148)
36 3v0s_A Perakine reductase; AKR 33.7 12 0.0004 27.1 0.7 14 6-19 49-64 (337)
37 1zro_A Erythrocyte binding ant 32.9 11 0.00038 30.9 0.5 22 2-28 444-465 (602)
38 1zro_A Erythrocyte binding ant 32.0 12 0.0004 30.8 0.5 20 2-26 138-157 (602)
39 2pjs_A AGR_C_3564P, uncharacte 31.3 44 0.0015 18.8 2.9 33 31-63 74-114 (119)
40 2yk0_A Erythrocyte membrane pr 37.3 10 0.00035 32.3 0.0 23 2-29 254-276 (790)
41 3huh_A Virulence protein STM31 30.9 49 0.0017 19.7 3.1 35 30-64 95-140 (152)
42 2con_A RUH-035 protein, NIN on 30.8 16 0.00055 22.8 0.9 14 54-67 64-77 (79)
43 1pyf_A IOLS protein; beta-alph 30.7 14 0.00047 26.2 0.6 14 6-19 50-64 (312)
44 3ey7_A Biphenyl-2,3-DIOL 1,2-d 30.6 38 0.0013 19.2 2.5 34 31-64 83-127 (133)
45 3rmu_A Methylmalonyl-COA epime 30.4 53 0.0018 18.4 3.1 18 31-48 87-104 (134)
46 2vg3_A Undecaprenyl pyrophosph 30.4 25 0.00085 26.3 2.0 39 13-53 182-231 (284)
47 1npb_A Fosfomycin-resistance p 30.2 51 0.0017 19.5 3.1 35 30-64 75-114 (141)
48 4h8e_A Undecaprenyl pyrophosph 30.1 20 0.00067 26.6 1.4 17 13-29 151-167 (256)
49 3rri_A Glyoxalase/bleomycin re 30.0 48 0.0017 19.2 2.9 35 30-64 79-125 (135)
50 2p25_A Glyoxalase family prote 30.0 55 0.0019 18.2 3.1 17 31-47 83-99 (126)
51 3ouv_A Serine/threonine protei 30.0 30 0.001 19.4 1.9 17 31-47 17-33 (71)
52 3qqz_A Putative uncharacterize 29.7 23 0.00079 25.2 1.7 18 53-76 229-246 (255)
53 1p2x_A RNG2 protein, RAS GTPas 29.6 28 0.00096 23.3 2.0 18 31-48 138-155 (159)
54 2a4x_A Mitomycin-binding prote 29.4 56 0.0019 19.2 3.2 34 31-64 84-125 (138)
55 2rk0_A Glyoxalase/bleomycin re 29.2 36 0.0012 20.0 2.2 34 30-63 84-123 (136)
56 2i7r_A Conserved domain protei 28.6 39 0.0013 19.2 2.3 16 31-46 73-88 (118)
57 3rhe_A NAD-dependent benzaldeh 28.6 39 0.0013 20.8 2.4 34 31-64 80-120 (148)
58 2p7o_A Glyoxalase family prote 28.6 68 0.0023 18.4 3.4 35 30-64 77-119 (133)
59 2vg0_A Short-chain Z-isoprenyl 28.5 31 0.001 24.7 2.1 17 13-29 128-144 (227)
60 3n6q_A YGHZ aldo-keto reductas 28.5 16 0.00054 26.3 0.6 14 6-19 58-74 (346)
61 3ghj_A Putative integron gene 28.4 47 0.0016 20.0 2.8 34 30-63 96-137 (141)
62 3uh9_A Metallothiol transferas 28.2 67 0.0023 18.9 3.4 35 30-64 74-116 (145)
63 3g12_A Putative lactoylglutath 28.1 44 0.0015 19.9 2.6 34 31-64 76-117 (128)
64 2c21_A Trypanothione-dependent 27.7 83 0.0028 18.6 3.8 34 31-64 87-124 (144)
65 2gnp_A Transcriptional regulat 27.2 37 0.0013 23.9 2.4 21 22-42 235-263 (266)
66 3ldg_A Putative uncharacterize 27.2 1.2E+02 0.0041 22.6 5.3 37 16-52 235-293 (384)
67 4gf2_A Erythrocyte binding ant 27.0 16 0.00055 29.6 0.5 22 2-28 137-158 (615)
68 3eau_A Voltage-gated potassium 26.9 11 0.00039 26.8 -0.4 14 6-19 48-62 (327)
69 1r9c_A Glutathione transferase 26.8 74 0.0025 18.7 3.4 34 31-64 78-119 (139)
70 3k0b_A Predicted N6-adenine-sp 26.6 1.3E+02 0.0044 22.4 5.4 53 16-73 242-316 (393)
71 1ynp_A Oxidoreductase, AKR11C1 26.5 16 0.00055 26.3 0.3 14 6-19 63-77 (317)
72 1jc4_A Methylmalonyl-COA epime 26.2 99 0.0034 17.8 4.1 17 31-47 98-114 (148)
73 3efb_A Probable SOR-operon reg 25.8 39 0.0013 23.8 2.3 19 22-40 240-266 (266)
74 1ur3_M Hypothetical oxidoreduc 25.3 23 0.00077 25.5 1.0 14 6-19 68-82 (319)
75 2qqz_A Glyoxalase family prote 25.2 68 0.0023 18.3 3.0 33 31-63 82-120 (126)
76 2dii_A TFIIH basal transcripti 24.9 11 0.00038 22.7 -0.6 7 5-11 45-51 (61)
77 3erp_A Putative oxidoreductase 24.5 21 0.00071 26.0 0.6 14 6-19 79-95 (353)
78 3oa4_A Glyoxalase, BH1468 prot 24.2 78 0.0027 19.3 3.3 34 31-64 89-133 (161)
79 3zw5_A Glyoxalase domain-conta 24.1 51 0.0017 19.8 2.3 35 30-64 99-144 (147)
80 2hfv_A Hypothetical protein RP 24.1 39 0.0013 21.7 1.8 16 30-45 75-90 (97)
81 3iz6_M 40S ribosomal protein S 24.1 15 0.00051 25.3 -0.2 61 14-74 20-89 (152)
82 3ct8_A Protein BH2160, putativ 24.0 81 0.0028 19.0 3.3 33 31-63 99-142 (146)
83 1pz1_A GSP69, general stress p 23.9 18 0.00061 26.1 0.2 14 6-19 49-63 (333)
84 3vw9_A Lactoylglutathione lyas 23.8 93 0.0032 19.2 3.6 33 31-63 137-176 (187)
85 2r6u_A Uncharacterized protein 23.7 77 0.0026 19.3 3.1 35 30-64 99-141 (148)
86 2za0_A Glyoxalase I; lyase, la 23.4 95 0.0032 19.2 3.6 33 31-63 134-173 (184)
87 1n08_A Putative riboflavin kin 23.4 55 0.0019 22.4 2.6 21 22-42 130-150 (163)
88 2rbb_A Glyoxalase/bleomycin re 23.1 94 0.0032 18.2 3.4 34 31-64 88-129 (141)
89 1we1_A Heme oxygenase 1; oxido 22.9 1.4E+02 0.0049 20.8 4.8 37 6-44 154-194 (240)
90 1gve_A Aflatoxin B1 aldehyde r 22.7 19 0.00066 25.6 0.2 8 7-14 38-45 (327)
91 3m2o_A Glyoxalase/bleomycin re 22.5 73 0.0025 19.7 2.9 34 31-64 100-141 (164)
92 1wi9_A Protein C20ORF116 homol 22.3 33 0.0011 21.2 1.2 15 48-62 48-62 (72)
93 2q32_A Heme oxygenase 2, HO-2; 22.0 1.5E+02 0.0053 21.1 4.9 37 6-44 185-225 (264)
94 2kjz_A ATC0852; protein of unk 21.8 50 0.0017 20.0 2.0 33 31-63 99-138 (144)
95 3itw_A Protein TIOX; bleomycin 21.2 1.1E+02 0.0037 17.8 3.3 34 31-64 78-119 (137)
96 1nb0_A Hypothetical protein FL 21.1 53 0.0018 22.0 2.1 21 21-41 111-131 (147)
97 3lut_A Voltage-gated potassium 20.5 18 0.00061 26.4 -0.4 14 6-19 82-96 (367)
98 2zyc_A Peptidoglycan hydrolase 20.5 1.1E+02 0.0037 20.7 3.6 38 19-56 8-60 (170)
99 3sk2_A EHPR; antibiotic resist 20.4 82 0.0028 18.3 2.7 33 31-63 85-127 (132)
100 1ecs_A Bleomycin resistance pr 20.3 92 0.0031 18.0 2.9 34 31-64 68-116 (126)
101 1f9z_A Glyoxalase I; beta-alph 20.3 1.3E+02 0.0044 17.0 3.9 34 31-64 81-123 (135)
No 1
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=3.3e-47 Score=266.78 Aligned_cols=77 Identities=60% Similarity=1.031 Sum_probs=74.7
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHHHh----cHHHHHHHHHHcCceeecCCeeeeeccCCCccccCceeeeCCCCccc
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIR 77 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~e~----d~~tAq~ildaA~itlp~g~L~~~YDe~G~~Y~lP~~vis~P~N~~~ 77 (79)
+||+|||||||+|+||+|||+|||+||++ |++|||+|||+||||||+|||+.|||++|++|+||+||+|+|+||++
T Consensus 40 ~~R~EFWDT~p~~~Gr~EIW~ALraA~~~~e~~Dl~tAQ~IldaAgItvp~gdL~~cYDe~G~~Y~LP~yvls~P~Nl~~ 119 (137)
T 2ksn_A 40 SKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIE 119 (137)
T ss_dssp HHHHHHHTTSSTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSCBCSSCCSSEEEETTTEEEECCGGGTCCSTTTCC
T ss_pred HHHHHHHhcCCccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHcCCcccCCcHHHHHhccCCccCCCeeEeeCCccccc
Confidence 79999999999999999999999999963 99999999999999999999999999999999999999999999996
Q ss_pred C
Q 034912 78 E 78 (79)
Q Consensus 78 ~ 78 (79)
+
T Consensus 120 ~ 120 (137)
T 2ksn_A 120 E 120 (137)
T ss_dssp C
T ss_pred c
Confidence 5
No 2
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=63.41 E-value=7.8 Score=22.96 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=25.8
Q ss_pred cHHHHHHHHHHcCceee-------cCCeeeeeccCCCccc
Q 034912 31 DLSLAQAIVDSAGVIVQ-------SADLTICYDERGAKYE 63 (79)
Q Consensus 31 d~~tAq~ildaA~itlp-------~g~L~~~YDe~G~~Y~ 63 (79)
|++.+..-|.++|+++- .|...-+.|-.||...
T Consensus 108 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~ie 147 (156)
T 3kol_A 108 LFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIE 147 (156)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEE
Confidence 89999999999999873 3444467788888777
No 3
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=59.02 E-value=9.5 Score=23.51 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHcCceee-------cCCeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQ-------SADLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp-------~g~L~~~YDe~G~~Y~l 64 (79)
|++.+.+-|.++|+++. .|....+.|-.||...|
T Consensus 108 Dvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel 148 (155)
T 4g6x_A 108 DIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQL 148 (155)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEE
T ss_pred hhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEE
Confidence 88999999999999873 34444566777776554
No 4
>3jz0_A Lincosamide nucleotidyltransferase; alpha-beta structure, transferase-antibiotic CO; HET: APC CLY; 2.00A {Enterococcus faecium} PDB: 3jyy_A*
Probab=55.10 E-value=8.9 Score=28.36 Aligned_cols=36 Identities=11% Similarity=0.201 Sum_probs=31.1
Q ss_pred CCCcHHHHHHHHHHHHhcHHHHHHHHHHcCceeecC
Q 034912 14 YGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSA 49 (79)
Q Consensus 14 ~~Gr~EIW~aLraA~e~d~~tAq~ildaA~itlp~g 49 (79)
.....+||+||.++++-=.++|+.+-...|.+.|..
T Consensus 241 ~~~~~~iw~Al~~~~~LF~~la~~va~~~g~~yp~~ 276 (287)
T 3jz0_A 241 RLDKVELFEAYKNSLLLVMDLQSHLIEQYNLKVTHD 276 (287)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHTTTSCCSSCHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 566789999999999988899999988888888754
No 5
>2y8d_A Erythrocyte membrane protein 1; DBL epsilon, pfemp1, malaria; 1.84A {Plasmodium falciparum}
Probab=53.53 E-value=3.4 Score=30.98 Aligned_cols=22 Identities=23% Similarity=0.758 Sum_probs=19.0
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAA 28 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~ 28 (79)
+.|++||+.- |++||.|+-=+.
T Consensus 134 ~~Re~WW~~N-----r~~VWkam~C~~ 155 (306)
T 2y8d_A 134 EKRKKWWDMN-----KYHIWESMLCGY 155 (306)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHHHH
T ss_pred ccHHHHHHHh-----HHHHHHHhhhcc
Confidence 5799999977 899999998874
No 6
>2wau_A VAR2CSA, erythrocyte membrane protein 1 (pfemp1); chondroitin sulphate A, membrane protein DBL, malaria; 3.00A {Plasmodium falciparum}
Probab=52.95 E-value=3.5 Score=30.79 Aligned_cols=22 Identities=23% Similarity=0.767 Sum_probs=19.0
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAA 28 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~ 28 (79)
+.|++||+.- |++||.|+-=++
T Consensus 129 ~~Re~WW~~n-----r~~IWkam~C~~ 150 (302)
T 2wau_A 129 EKRKKWWDMN-----KYHIWESMLSGY 150 (302)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHHHH
T ss_pred ccHHHHHHHh-----hHhhhhhhcccc
Confidence 5799999977 899999998774
No 7
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=52.69 E-value=16 Score=20.73 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=22.3
Q ss_pred cHHHHHHHHHHcCceeec-------CCe-eeeeccCCCccc
Q 034912 31 DLSLAQAIVDSAGVIVQS-------ADL-TICYDERGAKYE 63 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~-------g~L-~~~YDe~G~~Y~ 63 (79)
|++.+..-|.++|+++-. |.- .-+.|-.|+...
T Consensus 91 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie 131 (134)
T 3l7t_A 91 DVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLE 131 (134)
T ss_dssp CHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEE
T ss_pred CHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEE
Confidence 788888899999998732 211 245666666554
No 8
>2pbe_A AAD6, aminoglycoside 6-adenylyltransferase; NYSGXRC, aminoglycoside 6-adenyltransferase, PSI-2, structural genomics; 2.65A {Bacillus subtilis} SCOP: a.160.1.5 d.218.1.13
Probab=51.04 E-value=18 Score=26.34 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=31.0
Q ss_pred CCCCcHHHHHHHHHHHHhcHHHHHHHHHHcCceeec
Q 034912 13 HYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQS 48 (79)
Q Consensus 13 ~~~Gr~EIW~aLraA~e~d~~tAq~ildaA~itlp~ 48 (79)
+.....+||+||.++++-=..+|+.+-...|+..|.
T Consensus 234 ~~~~~~~i~~al~~~~~LF~~~a~~va~~~~~~y~~ 269 (294)
T 2pbe_A 234 SVNGYQEMWKSLFTCYALFRKYSKAVSEGLAYKYPD 269 (294)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 466788999999999998888899888888887774
No 9
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=50.01 E-value=14 Score=23.02 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=25.5
Q ss_pred cHHHHHHHHHHcCceee-------cCCeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQ-------SADLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp-------~g~L~~~YDe~G~~Y~l 64 (79)
|++.+.+-|.++|+++- .|...-+.|-.||...|
T Consensus 75 d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel 115 (144)
T 3r6a_A 75 SLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEY 115 (144)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEE
T ss_pred CHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEE
Confidence 88999999999999873 23233677888887774
No 10
>2xu0_A Erythrocyte membrane protein 1; adhesion, virulence, duffy-binding-like-DO; 2.06A {Plasmodium falciparum palo alto}
Probab=49.94 E-value=4.1 Score=32.69 Aligned_cols=22 Identities=41% Similarity=1.045 Sum_probs=18.3
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAA 28 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~ 28 (79)
+.|++||+.- |++||.|+-=++
T Consensus 251 ~lREdWW~~N-----r~~VWkAMtC~~ 272 (487)
T 2xu0_A 251 KLREDWWTIN-----REQIWKALTCSA 272 (487)
T ss_dssp HHHHHHHHHH-----HHHHHHHHTTTC
T ss_pred ccHHHHHHHh-----HHHHHHHHhccC
Confidence 5799999877 899999987654
No 11
>3kj0_B BCL-2-like protein 11; BH3, apoptosis, protein-peptide complex, alternative splicing, cytoplasm, developmental protein, differentiation; 1.70A {Homo sapiens} PDB: 2pqk_B
Probab=49.34 E-value=7.2 Score=20.29 Aligned_cols=10 Identities=70% Similarity=1.225 Sum_probs=7.0
Q ss_pred CCCcHHHHHH
Q 034912 14 YGGRKEIWDA 23 (79)
Q Consensus 14 ~~Gr~EIW~a 23 (79)
.++++|||-|
T Consensus 2 s~~~PE~wiA 11 (27)
T 3kj0_B 2 SGGRPEIWYA 11 (27)
T ss_dssp --CCHHHHHH
T ss_pred CCCCchhHHH
Confidence 3689999976
No 12
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=47.78 E-value=7.7 Score=23.96 Aligned_cols=29 Identities=14% Similarity=0.198 Sum_probs=18.1
Q ss_pred CcHHHHHHHHHHHHh-cHHHHHHHHHHcCc
Q 034912 16 GRKEIWDALRAAAEA-DLSLAQAIVDSAGV 44 (79)
Q Consensus 16 Gr~EIW~aLraA~e~-d~~tAq~ildaA~i 44 (79)
|+++.+.+|..||.. +++..+.+|+..+.
T Consensus 1 G~~~~~~~l~~A~~~g~~~~v~~ll~~~~~ 30 (179)
T 3f6q_A 1 GSPEFMDDIFTQCREGNAVAVRLWLDNTEN 30 (179)
T ss_dssp ------CCHHHHHHHTCHHHHHHHHHCTTS
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHhcCcc
Confidence 678888888888864 88888888886544
No 13
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=46.42 E-value=9.8 Score=27.13 Aligned_cols=22 Identities=32% Similarity=0.406 Sum_probs=16.8
Q ss_pred HHHHHHHHh--------cHHHHHHHHHHcC
Q 034912 22 DALRAAAEA--------DLSLAQAIVDSAG 43 (79)
Q Consensus 22 ~aLraA~e~--------d~~tAq~ildaA~ 43 (79)
.||++|++. |..||+.||+..|
T Consensus 237 ~Ai~aal~g~~~~~LITDe~tA~~lL~~~~ 266 (267)
T 3nze_A 237 NGLQGALAAGLATDLILDEASARRLVSFNG 266 (267)
T ss_dssp HHHHHHHHTTCCSEEEEEHHHHHHHTC---
T ss_pred HHHHHHHhcCCCCEEEeCHHHHHHHHhhcC
Confidence 688888884 9999999997654
No 14
>3lvu_A ABC transporter, periplasmic substrate-binding PR; MCSG, PSI-2, periplasmic substrate-binding silicibacter pomeroyi, structural genomics; HET: MSE PG5; 1.79A {Silicibacter pomeroyi}
Probab=45.22 E-value=26 Score=23.41 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=26.4
Q ss_pred HhcHHHHHHHHHHcCceeecCCeeeeeccCCCccccCcee
Q 034912 29 EADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYV 68 (79)
Q Consensus 29 e~d~~tAq~ildaA~itlp~g~L~~~YDe~G~~Y~lP~~v 68 (79)
+-|.+.|+.+|+.||.+.- ++ +.++..|....|-..+
T Consensus 98 ~~d~~kAk~LL~eaG~~~~-~~--g~~~~~G~~l~l~l~~ 134 (258)
T 3lvu_A 98 RTNLRRAAQFLEQAGFRIE-QG--QLLGPDGAPLALRFLL 134 (258)
T ss_dssp HHHHHHHHHHHHHTTCEEE-TT--EEECTTSSBCCCEEEE
T ss_pred cCCHHHHHHHHHHcCCEeC-CC--cEECCCCcEEEEEEEe
Confidence 3489999999999999864 32 4566777666554443
No 15
>3bqk_A Pfemp1 protein, erythrocyte membrane protein 1; malaria, pregnancy, VAR2CSA encoded pfemp1 protein, DBL3X DO chondroitin sulphate A; 1.80A {Plasmodium falciparum} PDB: 3bqi_A 3bql_A 3cml_A 3cpz_A
Probab=45.15 E-value=7.2 Score=29.90 Aligned_cols=23 Identities=30% Similarity=0.787 Sum_probs=19.3
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAAE 29 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~e 29 (79)
+.|+++|+.- |++||.||-=++.
T Consensus 182 ~lREdWW~~N-----r~~VWkAmtC~~~ 204 (360)
T 3bqk_A 182 ENVNAWWKGI-----EREMWDAVRCAIT 204 (360)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHHHHH
T ss_pred hhHHHHHHHH-----HHHHHhhhccccc
Confidence 5699999876 8999999987763
No 16
>3u5c_S 40S ribosomal protein S18-A, 40S ribosomal protein S17-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_M 3o30_L 3o2z_L 3u5g_S 1s1h_M 3jyv_M* 2zkq_m
Probab=44.51 E-value=4.6 Score=27.73 Aligned_cols=61 Identities=18% Similarity=0.259 Sum_probs=38.7
Q ss_pred CCCcHHHHHHHHHHHHhcHHHHHHHHHHcCc--eeecCCee-----eeeccCCC--ccccCceeeeCCCC
Q 034912 14 YGGRKEIWDALRAAAEADLSLAQAIVDSAGV--IVQSADLT-----ICYDERGA--KYELPKYVLSEPTN 74 (79)
Q Consensus 14 ~~Gr~EIW~aLraA~e~d~~tAq~ildaA~i--tlp~g~L~-----~~YDe~G~--~Y~lP~~vis~P~N 74 (79)
.-|.+.|--||...-=--..+|+.|+..||| ..--|+|+ -.-+...+ .|.||.|.++-.-.
T Consensus 22 i~~~k~v~~ALt~I~GIG~~~A~~I~~~~gid~~~r~g~Lt~~ei~~l~~~i~~~~~~~iP~w~lNR~kD 91 (146)
T 3u5c_S 22 VDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPTHYKIPAWFLNRQND 91 (146)
T ss_dssp BCSSSCTTTTGGGSTTCCHHHHHHHHHHHTCCTTSCSSSCCHHHHHHHHHHHTCTTTTTCCSTTCTBCSC
T ss_pred CCCCcchHhhHhhhcCCCHHHHHHHHHHcCCCCCceeccCCHHHHHHHHHHHHhhcccCccHHHhhhhhc
Confidence 3444444444422211267899999999999 46778886 23344444 69999999875443
No 17
>3rrc_A Duffy receptor; duffy binding like, receptor recognition, duffy antigen RECE chemokines, cell invasion; HET: EDO; 1.95A {Plasmodium vivax} SCOP: a.264.1.1 PDB: 2c6j_A
Probab=43.88 E-value=5.9 Score=30.30 Aligned_cols=22 Identities=27% Similarity=0.805 Sum_probs=17.9
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAA 28 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~ 28 (79)
+.|+++|+.- |++||.|+--++
T Consensus 136 ~lRedWW~~N-----r~~VWkamtC~~ 157 (317)
T 3rrc_A 136 QRRKQWWNES-----KAQIWTAMMYSV 157 (317)
T ss_dssp HHHHHHHHHH-----HHHHHHHHTTTC
T ss_pred hHHHHHHHHh-----HHHHHhhhhcCC
Confidence 5799999876 899999986543
No 18
>1f75_A Undecaprenyl pyrophosphate synthetase; parallel beta sheet, NEW fold for isoprenoid synthase, peptidoglycan synthesis, transferase; 2.20A {Micrococcus luteus} SCOP: c.101.1.1
Probab=42.94 E-value=11 Score=27.56 Aligned_cols=17 Identities=59% Similarity=0.903 Sum_probs=15.4
Q ss_pred CCCCcHHHHHHHHHHHH
Q 034912 13 HYGGRKEIWDALRAAAE 29 (79)
Q Consensus 13 ~~~Gr~EIW~aLraA~e 29 (79)
.|+||.||=+|.|..++
T Consensus 147 ~YggR~eIv~A~r~l~~ 163 (249)
T 1f75_A 147 NYGGRKEIISAVQLIAE 163 (249)
T ss_dssp SCCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHH
Confidence 59999999999999876
No 19
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C
Probab=42.73 E-value=18 Score=27.25 Aligned_cols=31 Identities=23% Similarity=0.454 Sum_probs=24.3
Q ss_pred HHHHHHHHHHcCceeecCCeeeeeccCCCcccc
Q 034912 32 LSLAQAIVDSAGVIVQSADLTICYDERGAKYEL 64 (79)
Q Consensus 32 ~~tAq~ildaA~itlp~g~L~~~YDe~G~~Y~l 64 (79)
++....+|..+|+++|..+|. ||+-..+|+.
T Consensus 228 ~~~v~~~l~~~gL~~P~~~~~--~~~~~g~~~~ 258 (311)
T 3pvt_A 228 VDNTVPQVEMLGMTVPDPDLH--FDTESGHYRF 258 (311)
T ss_dssp HHHHHHHHHHTTCCCSCTTCE--EETTTTEEEC
T ss_pred HHHHHHHHHHcCCCCCCCCcC--ccCCCCceee
Confidence 566778899999999988765 8886666653
No 20
>1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidored; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2
Probab=42.58 E-value=38 Score=22.98 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=26.3
Q ss_pred CCCcHHHHHHHHHHHHh---cHHHHHHHHHHcCc
Q 034912 14 YGGRKEIWDALRAAAEA---DLSLAQAIVDSAGV 44 (79)
Q Consensus 14 ~~Gr~EIW~aLraA~e~---d~~tAq~ildaA~i 44 (79)
-.|++.-|...++++++ |-+..+.||++|..
T Consensus 151 ~~~~~~~wk~f~~~Ld~l~~d~~~~~~ii~~A~~ 184 (198)
T 1sk7_A 151 EGGRAQGWKSFVAILDGIELNEEEERLAAKGASD 184 (198)
T ss_dssp TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 35788999999999986 78889999999854
No 21
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=41.09 E-value=22 Score=21.96 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=26.0
Q ss_pred hcHHHHHHHHHHcCceee------cCCe-eeeeccCCCcccc
Q 034912 30 ADLSLAQAIVDSAGVIVQ------SADL-TICYDERGAKYEL 64 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp------~g~L-~~~YDe~G~~Y~l 64 (79)
.|++.+.+-|.++|+++- .|.- .-+.|-.||...|
T Consensus 88 ~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel 129 (160)
T 3r4q_A 88 AEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEV 129 (160)
T ss_dssp HHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEE
Confidence 478888888999999872 2333 3688999997763
No 22
>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A
Probab=40.77 E-value=33 Score=20.18 Aligned_cols=35 Identities=26% Similarity=0.241 Sum_probs=25.0
Q ss_pred hcHHHHHHHHHHcCceeec-----CCeeeeeccCCCcccc
Q 034912 30 ADLSLAQAIVDSAGVIVQS-----ADLTICYDERGAKYEL 64 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~-----g~L~~~YDe~G~~Y~l 64 (79)
.|++.+..-|.++|+++-. +...-+.|-.||...|
T Consensus 72 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel 111 (135)
T 1nki_A 72 ADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEE
Confidence 3788888888999998753 3334577888877664
No 23
>3vuu_A Erythrocyte membrane protein, putative; duffy binding-like domain, erythrocyte binding, merozoite SU malaria, cell adhesion; 2.09A {Plasmodium falciparum}
Probab=40.41 E-value=7.3 Score=29.23 Aligned_cols=23 Identities=17% Similarity=0.663 Sum_probs=18.9
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAAE 29 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~e 29 (79)
+.|+.||+.- |++||.|+-=++.
T Consensus 149 ~~re~WW~~N-----r~~VWkamtC~~~ 171 (305)
T 3vuu_A 149 KDAKKWWTEN-----RHHVWEAMMCGYQ 171 (305)
T ss_dssp CSHHHHHHHH-----HHHHHHHHHHHHH
T ss_pred hHHHHHHHHH-----HHhhhHheeccCc
Confidence 5689999876 8999999977654
No 24
>3pam_A Transmembrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.31A {Bartonella henselae}
Probab=39.67 E-value=30 Score=23.10 Aligned_cols=33 Identities=12% Similarity=0.211 Sum_probs=23.6
Q ss_pred HhcHHHHHHHHHHcCceeecCCeeeeeccCCCcccc
Q 034912 29 EADLSLAQAIVDSAGVIVQSADLTICYDERGAKYEL 64 (79)
Q Consensus 29 e~d~~tAq~ildaA~itlp~g~L~~~YDe~G~~Y~l 64 (79)
+-|++.|+.+|+.||.+.-.+ +.++..|....|
T Consensus 99 ~~d~~kAk~LL~eaG~~~~~~---g~~~~~G~~l~l 131 (259)
T 3pam_A 99 RLNAQKAWKLLQEAGFTKKNN---RLIAPNGLPFQF 131 (259)
T ss_dssp HHHHHHHHHHHHHTTCEEETT---EEECTTSCBCEE
T ss_pred ccCHHHHHHHHHHcCCccCCC---cEECCCCcEEEE
Confidence 348999999999999987322 455666755443
No 25
>1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A*
Probab=39.63 E-value=48 Score=22.58 Aligned_cols=38 Identities=13% Similarity=0.073 Sum_probs=28.4
Q ss_pred hhhccCCCCCCcHHHHHHHHHHHHh---cHHHHHHHHHHcCc
Q 034912 6 EFWDTAPHYGGRKEIWDALRAAAEA---DLSLAQAIVDSAGV 44 (79)
Q Consensus 6 EFwdT~p~~~Gr~EIW~aLraA~e~---d~~tAq~ildaA~i 44 (79)
.||..-. ..+.++.|+..|++++. |-+..+.||++|..
T Consensus 159 ~f~~~~~-~~~~~~~~~~fr~~Ld~~~~~~~~~~~ii~eA~~ 199 (215)
T 1wzd_A 159 GFYHFEG-IAKLKVYKDEYREKLNNLELSDEQREHLLKEATD 199 (215)
T ss_dssp GGGCCTT-CSCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred eeeecCC-cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 4665431 23569999999999986 78888899988854
No 26
>3qas_B Undecaprenyl pyrophosphate synthase; alpha-helix, isoprenoid biosynthesis, transferase; 1.70A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 1x09_A* 1x08_A*
Probab=39.46 E-value=14 Score=27.06 Aligned_cols=39 Identities=33% Similarity=0.459 Sum_probs=25.7
Q ss_pred CCCCcHHHHHHHHHHHHh-----------cHHHHHHHHHHcCceeecCCeee
Q 034912 13 HYGGRKEIWDALRAAAEA-----------DLSLAQAIVDSAGVIVQSADLTI 53 (79)
Q Consensus 13 ~~~Gr~EIW~aLraA~e~-----------d~~tAq~ildaA~itlp~g~L~~ 53 (79)
.|+||.||=+|.|..++. +.++=..-|..++ +|..||-+
T Consensus 144 ~YgGR~EIv~A~r~l~~~v~~g~l~~~~I~e~~i~~~L~t~~--~PdpDLlI 193 (253)
T 3qas_B 144 NYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHE--LAPVDLVI 193 (253)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTSCCGGGCCHHHHHTTSTTTT--SCCCCEEE
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCCChHHCCHHHHHHhhccCC--CCCCcEEE
Confidence 599999999999998762 2333333344444 57777753
No 27
>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1
Probab=39.39 E-value=35 Score=21.67 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=23.4
Q ss_pred HHHHHHHHh---cHHHHHHHHHHcCceeecCC
Q 034912 22 DALRAAAEA---DLSLAQAIVDSAGVIVQSAD 50 (79)
Q Consensus 22 ~aLraA~e~---d~~tAq~ildaA~itlp~g~ 50 (79)
+.|+.|+++ |+..|-++|..-+.+.|.-+
T Consensus 41 ~~L~~ALkas~Gdl~~AV~~LT~~~~~~P~q~ 72 (80)
T 1vdl_A 41 QILQQALKDSNGNLELAVAFLTAKNAKTPPQE 72 (80)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTSCCCCSCS
T ss_pred HHHHHHHHhccCCHHHHHHHHhcccccCCCCc
Confidence 456666664 99999999999999998755
No 28
>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}
Probab=39.34 E-value=50 Score=19.85 Aligned_cols=45 Identities=16% Similarity=0.241 Sum_probs=29.7
Q ss_pred hcHHHHHHHHHHcCceeec-------CCe-eeeeccCCCcccc---CceeeeCCCC
Q 034912 30 ADLSLAQAIVDSAGVIVQS-------ADL-TICYDERGAKYEL---PKYVLSEPTN 74 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~-------g~L-~~~YDe~G~~Y~l---P~~vis~P~N 74 (79)
.|++.+.+-|.++|+++.. |.. .-+.|-.|+...| |.|-+.+|-+
T Consensus 81 ~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~~~~~~g~ 136 (150)
T 3bqx_A 81 TEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNPVWPIGADGS 136 (150)
T ss_dssp GGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECTTSCEETTEE
T ss_pred HHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCCCceECCCCc
Confidence 4888888889999987632 322 2577999998775 4444444433
No 29
>3vuv_A Erythrocyte membrane protein, putative; duffy binding-like domain, erythrocyte binding, merozoite SU malaria, cell adhesion; 2.11A {Plasmodium falciparum}
Probab=38.97 E-value=7.9 Score=29.55 Aligned_cols=23 Identities=17% Similarity=0.663 Sum_probs=18.7
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAAE 29 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~e 29 (79)
+.|+.+|+.- |++||.|+-=++.
T Consensus 183 ~~re~WW~~N-----r~~VWkAmtC~~~ 205 (339)
T 3vuv_A 183 KDAKKWWTEN-----RHHVWEAMMCGYQ 205 (339)
T ss_dssp CSHHHHHHHH-----HHHHHHHHHHHHH
T ss_pred hhHHHHHHHH-----HHHHHHHhccccc
Confidence 5689999876 8999999976653
No 30
>1j77_A HEMO, heme oxygenase; proximal histidine, distal helix, oxidoreductase; HET: HEM; 1.50A {Neisseria meningitidis} SCOP: a.132.1.2 PDB: 1p3t_A* 1p3u_A* 1p3v_A*
Probab=37.19 E-value=51 Score=22.64 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=25.9
Q ss_pred CCcHHHHHHHHHHHHh---cHHHHHHHHHHcCce
Q 034912 15 GGRKEIWDALRAAAEA---DLSLAQAIVDSAGVI 45 (79)
Q Consensus 15 ~Gr~EIW~aLraA~e~---d~~tAq~ildaA~it 45 (79)
.++++-|...+++++. |-+..+.||++|..+
T Consensus 147 ~~~~~~w~~fr~~Ld~l~~d~~~~~~ii~~A~~a 180 (209)
T 1j77_A 147 DGRGKHWRAFVEHLNALNLTPEAEAEAIQGAREA 180 (209)
T ss_dssp TCHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4788889999999986 788889999988654
No 31
>1pq1_B BCL2-like protein 11; BCL-XL/BIM, apoptosis; 1.65A {Mus musculus}
Probab=37.09 E-value=13 Score=20.09 Aligned_cols=7 Identities=57% Similarity=0.416 Sum_probs=5.8
Q ss_pred cHHHHHH
Q 034912 17 RKEIWDA 23 (79)
Q Consensus 17 r~EIW~a 23 (79)
|+|||-|
T Consensus 3 rPEiwIA 9 (33)
T 1pq1_B 3 RPEIRIA 9 (33)
T ss_dssp CHHHHHH
T ss_pred ChHHHHH
Confidence 6899966
No 32
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=36.81 E-value=20 Score=25.45 Aligned_cols=22 Identities=23% Similarity=0.172 Sum_probs=18.3
Q ss_pred HHHHHHHHHh--------cHHHHHHHHHHc
Q 034912 21 WDALRAAAEA--------DLSLAQAIVDSA 42 (79)
Q Consensus 21 W~aLraA~e~--------d~~tAq~ildaA 42 (79)
=+|+++|++. |..||+.||+..
T Consensus 234 ~~ai~~al~~~~~~~LITDe~tA~~lL~~~ 263 (267)
T 3kv1_A 234 ALSIMGALRTGVIDVLATSVSCAMALLNLA 263 (267)
T ss_dssp HHHHHHHHHTSCCSEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEeCHHHHHHHHhcc
Confidence 3688899884 999999999864
No 33
>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}
Probab=35.61 E-value=40 Score=19.11 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=22.6
Q ss_pred cHHHHHHHHHHcCceeec-------C-CeeeeeccCCCccc
Q 034912 31 DLSLAQAIVDSAGVIVQS-------A-DLTICYDERGAKYE 63 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~-------g-~L~~~YDe~G~~Y~ 63 (79)
|++.+..-|.++|+++-. | ....+.|-.|+...
T Consensus 89 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~e 129 (133)
T 4hc5_A 89 DIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFF 129 (133)
T ss_dssp CHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEE
T ss_pred CHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEE
Confidence 888888999999998753 2 12245666666554
No 34
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=34.20 E-value=19 Score=26.56 Aligned_cols=17 Identities=47% Similarity=0.784 Sum_probs=15.2
Q ss_pred CCCCcHHHHHHHHHHHH
Q 034912 13 HYGGRKEIWDALRAAAE 29 (79)
Q Consensus 13 ~~~Gr~EIW~aLraA~e 29 (79)
.|+||.||=+|.|..++
T Consensus 144 ~YggR~EI~~Avr~ia~ 160 (253)
T 3sgv_B 144 NYGGRWDIVQGVRQLAE 160 (253)
T ss_dssp SCCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHH
Confidence 59999999999998875
No 35
>3j20_O 30S ribosomal protein S13P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=33.98 E-value=4.7 Score=27.75 Aligned_cols=59 Identities=20% Similarity=0.303 Sum_probs=39.8
Q ss_pred CCCcHHHHHHHHHHHHhcHHHHHHHHHHcCce--eecCCeee-----eeccCCC--ccccCceeeeCC
Q 034912 14 YGGRKEIWDALRAAAEADLSLAQAIVDSAGVI--VQSADLTI-----CYDERGA--KYELPKYVLSEP 72 (79)
Q Consensus 14 ~~Gr~EIW~aLraA~e~d~~tAq~ildaA~it--lp~g~L~~-----~YDe~G~--~Y~lP~~vis~P 72 (79)
.-|.+-|.-||...-=--..+|+.|+..|||. .--|+|+. .=+...+ .|.+|.|.++-+
T Consensus 15 i~~~k~v~~aLt~I~GIG~~~A~~I~~~~gid~~~r~g~Lt~~ei~~i~~~i~~~~~~~iP~w~lNr~ 82 (148)
T 3j20_O 15 LDGNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILADPVAHGIPRWAVNRP 82 (148)
T ss_dssp EECSSCHHHHHHHSTTCCHHHHHHHHHHHTCCSSSCTTBCCHHHHHHHHHHHHCHHHHCCCTTTSSEE
T ss_pred CCCCCEehhhhhhccCcCHHHHHHHHHHhCCCCCceeccCCHHHHHHHHHHHhcccccCCChhhhccc
Confidence 55677777777433223789999999999995 55678761 1122333 488999998754
No 36
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=33.70 E-value=12 Score=27.08 Aligned_cols=14 Identities=50% Similarity=0.978 Sum_probs=10.8
Q ss_pred hhhccCCCCC--CcHH
Q 034912 6 EFWDTAPHYG--GRKE 19 (79)
Q Consensus 6 EFwdT~p~~~--Gr~E 19 (79)
-||||++.|+ |+.|
T Consensus 49 ~~~DTA~~Yg~~G~sE 64 (337)
T 3v0s_A 49 TFFDTSDIYGENGSNE 64 (337)
T ss_dssp CEEECCTTSSSTTHHH
T ss_pred CEEEChhhhCCCCcHH
Confidence 3899999998 5555
No 37
>1zro_A Erythrocyte binding antigen region II; EBA-175, RII, DBL, invasion, HOST, malaria, disease, glycophorin, glycan, sialic acid; HET: SO4; 2.25A {Plasmodium falciparum} SCOP: a.264.1.1 a.264.1.1 PDB: 1zrl_A*
Probab=32.90 E-value=11 Score=30.92 Aligned_cols=22 Identities=27% Similarity=0.847 Sum_probs=17.9
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAA 28 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~ 28 (79)
+.|++||+.- |++||.|+-=++
T Consensus 444 ~~Re~WW~~N-----r~~IWkam~C~~ 465 (602)
T 1zro_A 444 LFRDEWWKVI-----KKDVWNVISWVF 465 (602)
T ss_dssp HHHHHHHHHH-----HHHHHHHHTTTS
T ss_pred ccHHHHHHHh-----HHHhhhhceecc
Confidence 5699999976 899999986643
No 38
>1zro_A Erythrocyte binding antigen region II; EBA-175, RII, DBL, invasion, HOST, malaria, disease, glycophorin, glycan, sialic acid; HET: SO4; 2.25A {Plasmodium falciparum} SCOP: a.264.1.1 a.264.1.1 PDB: 1zrl_A*
Probab=31.99 E-value=12 Score=30.77 Aligned_cols=20 Identities=25% Similarity=0.959 Sum_probs=16.6
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRA 26 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLra 26 (79)
+.|+++|+.- |++||.|+--
T Consensus 138 ~lRedWW~~N-----r~~vWkamtC 157 (602)
T 1zro_A 138 NFRKKWWNEF-----REKLWEAMLS 157 (602)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHT
T ss_pred hhHHHHHHHH-----HHhhhhhhcc
Confidence 4699999876 8999999864
No 39
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=31.33 E-value=44 Score=18.83 Aligned_cols=33 Identities=15% Similarity=0.147 Sum_probs=21.8
Q ss_pred cHHHHHHHHHHcCceeec-------C-CeeeeeccCCCccc
Q 034912 31 DLSLAQAIVDSAGVIVQS-------A-DLTICYDERGAKYE 63 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~-------g-~L~~~YDe~G~~Y~ 63 (79)
|++.+..-|.++|+++-. | ...-+.|-.||...
T Consensus 74 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie 114 (119)
T 2pjs_A 74 NFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLIN 114 (119)
T ss_dssp CHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEE
Confidence 788888899999987632 2 12245566666554
No 40
>2yk0_A Erythrocyte membrane protein 1; adhesin, pfemp1; 2.80A {Plasmodium falciparum}
Probab=37.27 E-value=10 Score=32.28 Aligned_cols=23 Identities=39% Similarity=0.992 Sum_probs=19.0
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAAE 29 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~e 29 (79)
+.|++||+.- |.+||.||-=++.
T Consensus 254 ~lREdWW~aN-----R~~VWkAmtC~a~ 276 (790)
T 2yk0_A 254 KLREDWWTIN-----REQIWKALTCSAP 276 (790)
Confidence 5799999876 8999999986654
No 41
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=30.89 E-value=49 Score=19.73 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=25.4
Q ss_pred hcHHHHHHHHHHcCceeec-------C----CeeeeeccCCCcccc
Q 034912 30 ADLSLAQAIVDSAGVIVQS-------A----DLTICYDERGAKYEL 64 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~-------g----~L~~~YDe~G~~Y~l 64 (79)
.|++.+.+-|.++|+++-. + ...-+.|-.||..+|
T Consensus 95 ~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl 140 (152)
T 3huh_A 95 TPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEI 140 (152)
T ss_dssp SCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEE
T ss_pred CCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEE
Confidence 3899999999999998622 1 223477888887765
No 42
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=30.77 E-value=16 Score=22.76 Aligned_cols=14 Identities=21% Similarity=0.389 Sum_probs=11.8
Q ss_pred eeccCCCccccCce
Q 034912 54 CYDERGAKYELPKY 67 (79)
Q Consensus 54 ~YDe~G~~Y~lP~~ 67 (79)
|+..+|++|.||+.
T Consensus 64 ~~n~RG~~ySlPkp 77 (79)
T 2con_A 64 VLNPRGLRYSSGPS 77 (79)
T ss_dssp CCCCCCCCCCCCCC
T ss_pred ccccCCCCccCCCC
Confidence 47889999999974
No 43
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=30.71 E-value=14 Score=26.20 Aligned_cols=14 Identities=57% Similarity=0.821 Sum_probs=10.1
Q ss_pred hhhccCCCCC-CcHH
Q 034912 6 EFWDTAPHYG-GRKE 19 (79)
Q Consensus 6 EFwdT~p~~~-Gr~E 19 (79)
-||||++.|+ |+.|
T Consensus 50 ~~~DTA~~Yg~G~sE 64 (312)
T 1pyf_A 50 TMLDTAYIYGIGRSE 64 (312)
T ss_dssp CEEECCTTTTTTHHH
T ss_pred CEEECccccCCCchH
Confidence 3799999887 4444
No 44
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=30.62 E-value=38 Score=19.21 Aligned_cols=34 Identities=26% Similarity=0.216 Sum_probs=24.1
Q ss_pred cHHHHHHHHHHcCceeecC-----------CeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQSA-----------DLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~g-----------~L~~~YDe~G~~Y~l 64 (79)
|++.+..-|.++|+++-.+ ...-+.|-.||...|
T Consensus 83 d~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel 127 (133)
T 3ey7_A 83 VLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEV 127 (133)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEE
Confidence 4999999999999987432 122577777877663
No 45
>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0
Probab=30.37 E-value=53 Score=18.40 Aligned_cols=18 Identities=11% Similarity=0.045 Sum_probs=15.5
Q ss_pred cHHHHHHHHHHcCceeec
Q 034912 31 DLSLAQAIVDSAGVIVQS 48 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~ 48 (79)
|++.+..-|.++|+.+..
T Consensus 87 d~~~~~~~l~~~G~~~~~ 104 (134)
T 3rmu_A 87 NINAAVMDLKKKKIRSLS 104 (134)
T ss_dssp CHHHHHHHHHHTTCTTBC
T ss_pred CHHHHHHHHHHcCCcccC
Confidence 899999999999998743
No 46
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=30.37 E-value=25 Score=26.31 Aligned_cols=39 Identities=31% Similarity=0.442 Sum_probs=26.3
Q ss_pred CCCCcHHHHHHHHHHHHh-----------cHHHHHHHHHHcCceeecCCeee
Q 034912 13 HYGGRKEIWDALRAAAEA-----------DLSLAQAIVDSAGVIVQSADLTI 53 (79)
Q Consensus 13 ~~~Gr~EIW~aLraA~e~-----------d~~tAq~ildaA~itlp~g~L~~ 53 (79)
.|+||.||=+|.|..++. +.++=..-|..++ +|..||-+
T Consensus 182 ~YgGR~EIv~A~r~la~~v~~g~l~~~dI~e~~i~~~L~t~~--~PdPDLlI 231 (284)
T 2vg3_A 182 NYGGRTEITEATREIAREVAAGRLNPERITESTIARHLQRPD--IPDVDLFL 231 (284)
T ss_dssp EECHHHHHHHHHHHHHHHHHTTSSCGGGCCHHHHHHHSSSTT--CCCCSEEE
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCCChHHCCHHHHHHHhccCC--CCCCcEEE
Confidence 489999999999998762 3444444444444 57777753
No 47
>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2
Probab=30.17 E-value=51 Score=19.46 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=24.3
Q ss_pred hcHHHHHHHHHHcCceeecC-----CeeeeeccCCCcccc
Q 034912 30 ADLSLAQAIVDSAGVIVQSA-----DLTICYDERGAKYEL 64 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~g-----~L~~~YDe~G~~Y~l 64 (79)
.|++.+..-|.++|+++-.. ....+.|-.||...|
T Consensus 75 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel 114 (141)
T 1npb_A 75 EDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLEL 114 (141)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEE
Confidence 37888888889999876432 233567777877653
No 48
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=30.06 E-value=20 Score=26.57 Aligned_cols=17 Identities=29% Similarity=0.720 Sum_probs=15.1
Q ss_pred CCCCcHHHHHHHHHHHH
Q 034912 13 HYGGRKEIWDALRAAAE 29 (79)
Q Consensus 13 ~~~Gr~EIW~aLraA~e 29 (79)
.|+||.||=+|.|..++
T Consensus 151 ~YggR~EI~~Avr~i~~ 167 (256)
T 4h8e_A 151 NYGGRAELVHSIKNMFD 167 (256)
T ss_dssp EECHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 58999999999998875
No 49
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=30.05 E-value=48 Score=19.18 Aligned_cols=35 Identities=9% Similarity=0.097 Sum_probs=25.1
Q ss_pred hcHHHHHHHHHHcCceeec-------C---Ce--eeeeccCCCcccc
Q 034912 30 ADLSLAQAIVDSAGVIVQS-------A---DL--TICYDERGAKYEL 64 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~-------g---~L--~~~YDe~G~~Y~l 64 (79)
.|++.+..-|.++|+++-. | .. .-+.|-.||...|
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel 125 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEF 125 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEE
T ss_pred HhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEE
Confidence 4788999999999998732 1 11 2567888887765
No 50
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=30.03 E-value=55 Score=18.23 Aligned_cols=17 Identities=12% Similarity=0.294 Sum_probs=14.4
Q ss_pred cHHHHHHHHHHcCceee
Q 034912 31 DLSLAQAIVDSAGVIVQ 47 (79)
Q Consensus 31 d~~tAq~ildaA~itlp 47 (79)
|++.+..-|.++|+++-
T Consensus 83 d~~~~~~~l~~~G~~~~ 99 (126)
T 2p25_A 83 HIEEVIAFLNEQGIETE 99 (126)
T ss_dssp CHHHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHcCCccc
Confidence 78888899999998863
No 51
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=29.95 E-value=30 Score=19.43 Aligned_cols=17 Identities=18% Similarity=0.167 Sum_probs=14.6
Q ss_pred cHHHHHHHHHHcCceee
Q 034912 31 DLSLAQAIVDSAGVIVQ 47 (79)
Q Consensus 31 d~~tAq~ildaA~itlp 47 (79)
.++.|+.+|.++|+++-
T Consensus 17 ~~~~A~~~L~~~Gl~~~ 33 (71)
T 3ouv_A 17 TVDVAQKNMNVYGFTKF 33 (71)
T ss_dssp BHHHHHHHHHHTTCCCE
T ss_pred CHHHHHHHHHHCCCeEE
Confidence 57889999999999763
No 52
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=29.67 E-value=23 Score=25.16 Aligned_cols=18 Identities=39% Similarity=0.755 Sum_probs=13.9
Q ss_pred eeeccCCCccccCceeeeCCCCcc
Q 034912 53 ICYDERGAKYELPKYVLSEPTNLI 76 (79)
Q Consensus 53 ~~YDe~G~~Y~lP~~vis~P~N~~ 76 (79)
+++|..|+.| |+|+| |+.
T Consensus 229 ia~d~~G~ly-----IvsE~-n~~ 246 (255)
T 3qqz_A 229 VAMDASGNIY-----IVSEP-NRF 246 (255)
T ss_dssp EEECTTCCEE-----EEETT-TEE
T ss_pred eEECCCCCEE-----EEcCC-ceE
Confidence 6899999865 78888 553
No 53
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=29.60 E-value=28 Score=23.28 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=16.2
Q ss_pred cHHHHHHHHHHcCceeec
Q 034912 31 DLSLAQAIVDSAGVIVQS 48 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~ 48 (79)
++..++..|+.+|+.+|+
T Consensus 138 ql~~~~~~l~~~g~~~~~ 155 (159)
T 1p2x_A 138 DVSIIVRRLRQSNVILPN 155 (159)
T ss_dssp HHHHHHHHHHHCCCCCCC
T ss_pred HHHHHHHHHHHcCCCCCC
Confidence 588999999999999886
No 54
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=29.44 E-value=56 Score=19.18 Aligned_cols=34 Identities=21% Similarity=0.166 Sum_probs=24.0
Q ss_pred cHHHHHHHHHHcCceeec-------CC-eeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQS-------AD-LTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~-------g~-L~~~YDe~G~~Y~l 64 (79)
|++.+..-|.++|+++-. |. ..-+.|-.|+...|
T Consensus 84 dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel 125 (138)
T 2a4x_A 84 SVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDL 125 (138)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEE
Confidence 788888888999987632 21 23567888887764
No 55
>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}
Probab=29.16 E-value=36 Score=19.96 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=21.1
Q ss_pred hcHHHHHHHHHHcCceeec------CCeeeeeccCCCccc
Q 034912 30 ADLSLAQAIVDSAGVIVQS------ADLTICYDERGAKYE 63 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~------g~L~~~YDe~G~~Y~ 63 (79)
.|++.+.+-|.++|+++-. |...-+.|-.||...
T Consensus 84 ~d~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~DPdG~~ie 123 (136)
T 2rk0_A 84 TDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALE 123 (136)
T ss_dssp HHHHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHHHCCCcccCccccCCceEEEEECCCCCEEE
Confidence 3788888888889987632 211234566666554
No 56
>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2
Probab=28.65 E-value=39 Score=19.18 Aligned_cols=16 Identities=19% Similarity=0.306 Sum_probs=14.2
Q ss_pred cHHHHHHHHHHcCcee
Q 034912 31 DLSLAQAIVDSAGVIV 46 (79)
Q Consensus 31 d~~tAq~ildaA~itl 46 (79)
|++.+..-|.++|+++
T Consensus 73 d~~~~~~~l~~~G~~~ 88 (118)
T 2i7r_A 73 DVDQNYKRLNELGIKV 88 (118)
T ss_dssp CHHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHCCCce
Confidence 8888999999999886
No 57
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=28.63 E-value=39 Score=20.81 Aligned_cols=34 Identities=3% Similarity=-0.059 Sum_probs=24.5
Q ss_pred cHHHHHHHHHHcCceee-------cCCeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQ-------SADLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp-------~g~L~~~YDe~G~~Y~l 64 (79)
|++.+.+-|.++|+++. .|....+.|-.|+...|
T Consensus 80 dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel 120 (148)
T 3rhe_A 80 MVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRI 120 (148)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEE
Confidence 58888888889998873 23234677888887764
No 58
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=28.55 E-value=68 Score=18.39 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=24.1
Q ss_pred hcHHHHHHHHHHcCceeecC--------CeeeeeccCCCcccc
Q 034912 30 ADLSLAQAIVDSAGVIVQSA--------DLTICYDERGAKYEL 64 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~g--------~L~~~YDe~G~~Y~l 64 (79)
.|++.+..-|.++|+++... ...-+.|-.||...|
T Consensus 77 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel 119 (133)
T 2p7o_A 77 EEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFEL 119 (133)
T ss_dssp GGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEE
T ss_pred HHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEE
Confidence 48888888899999886432 122466777777663
No 59
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=28.54 E-value=31 Score=24.66 Aligned_cols=17 Identities=59% Similarity=0.898 Sum_probs=15.2
Q ss_pred CCCCcHHHHHHHHHHHH
Q 034912 13 HYGGRKEIWDALRAAAE 29 (79)
Q Consensus 13 ~~~Gr~EIW~aLraA~e 29 (79)
.|+||.||=+|.|..++
T Consensus 128 ~YggR~eI~~A~r~l~~ 144 (227)
T 2vg0_A 128 GYGGRREIVDAVRALLS 144 (227)
T ss_dssp EECHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHH
Confidence 58999999999998875
No 60
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=28.46 E-value=16 Score=26.34 Aligned_cols=14 Identities=43% Similarity=0.797 Sum_probs=10.7
Q ss_pred hhhccCCCCC---CcHH
Q 034912 6 EFWDTAPHYG---GRKE 19 (79)
Q Consensus 6 EFwdT~p~~~---Gr~E 19 (79)
-||||++.|+ |+.|
T Consensus 58 ~~~DTA~~Yg~~~G~sE 74 (346)
T 3n6q_A 58 THFDLANNYGPPPGSAE 74 (346)
T ss_dssp CEEECCTTCTTTTTHHH
T ss_pred CEEECccccCCCCCcHH
Confidence 3889999888 5555
No 61
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=28.43 E-value=47 Score=19.97 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=22.6
Q ss_pred hcHHHHHHHHHHcCceeec------C--CeeeeeccCCCccc
Q 034912 30 ADLSLAQAIVDSAGVIVQS------A--DLTICYDERGAKYE 63 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~------g--~L~~~YDe~G~~Y~ 63 (79)
.|++.+..-|.++|+++-. + ...-+.|-.||...
T Consensus 96 ~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~ie 137 (141)
T 3ghj_A 96 SEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALE 137 (141)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEE
Confidence 3899999999999998741 1 11245566666544
No 62
>3uh9_A Metallothiol transferase FOSB 2; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: MSE; 1.60A {Bacillus anthracis}
Probab=28.18 E-value=67 Score=18.94 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=25.1
Q ss_pred hcHHHHHHHHHHcCceeecC--------CeeeeeccCCCcccc
Q 034912 30 ADLSLAQAIVDSAGVIVQSA--------DLTICYDERGAKYEL 64 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~g--------~L~~~YDe~G~~Y~l 64 (79)
.|++.+..-|.++|+++-.+ ...-+.|-.||...|
T Consensus 74 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel 116 (145)
T 3uh9_A 74 EALDHLKEVLIQNDVNILPGRERDERDQRSLYFTDPDGHKFEF 116 (145)
T ss_dssp HHHHHHHHHHHHTTCCBCCCCCCCGGGCCEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCeEecCCccCCCCeeEEEEEcCCCCEEEE
Confidence 37888999999999987332 223567888887664
No 63
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=28.15 E-value=44 Score=19.87 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=23.2
Q ss_pred cHHHHHHHHHHcCce-ee-------cCCeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVI-VQ-------SADLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~it-lp-------~g~L~~~YDe~G~~Y~l 64 (79)
|++.+.+-|.++|++ +- .|....+.|-.||...|
T Consensus 76 dvd~~~~~l~~~G~~~~~~~p~~~~~G~~~~~~DPdGn~iel 117 (128)
T 3g12_A 76 DLEKTVQELVKIPGAMCILDPTDMPDGKKAIVLDPDGHSIEL 117 (128)
T ss_dssp CHHHHHHHHTTSTTCEEEEEEEECC-CEEEEEECTTCCEEEE
T ss_pred CHHHHHHHHHHCCCceeccCceeCCCccEEEEECCCCCEEEE
Confidence 788889999999998 42 22233566777776653
No 64
>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1
Probab=27.67 E-value=83 Score=18.55 Aligned_cols=34 Identities=21% Similarity=0.151 Sum_probs=23.0
Q ss_pred cHHHHHHHHHHcCceeecC----CeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQSA----DLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~g----~L~~~YDe~G~~Y~l 64 (79)
|++.+..-|.++|+++... .++-+.|-.||...|
T Consensus 87 d~~~~~~~l~~~G~~~~~~~g~~~~~~~~DPdG~~iel 124 (144)
T 2c21_A 87 DVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIEL 124 (144)
T ss_dssp CHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred CHHHHHHHHHHCCCEEeccCCcEEEEEEECCCCCEEEE
Confidence 7888888999999887542 122456777766553
No 65
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=27.23 E-value=37 Score=23.95 Aligned_cols=21 Identities=10% Similarity=0.191 Sum_probs=17.6
Q ss_pred HHHHHHHHh--------cHHHHHHHHHHc
Q 034912 22 DALRAAAEA--------DLSLAQAIVDSA 42 (79)
Q Consensus 22 ~aLraA~e~--------d~~tAq~ildaA 42 (79)
.||++|++. |.++|+.+|+..
T Consensus 235 ~AI~aal~g~~~~~LItDe~aA~~Ll~~~ 263 (266)
T 2gnp_A 235 SSILSVLRANLVNHLITDKNTILKVLEED 263 (266)
T ss_dssp HHHHHHHHTTCCSEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEECHHHHHHHHhhc
Confidence 688888885 999999998754
No 66
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=27.16 E-value=1.2e+02 Score=22.62 Aligned_cols=37 Identities=16% Similarity=0.232 Sum_probs=28.4
Q ss_pred CcHHHHHHHHHHHHh------------------cHHHHHHHHHHcC----ceeecCCee
Q 034912 16 GRKEIWDALRAAAEA------------------DLSLAQAIVDSAG----VIVQSADLT 52 (79)
Q Consensus 16 Gr~EIW~aLraA~e~------------------d~~tAq~ildaA~----itlp~g~L~ 52 (79)
-.+++|+.++..++. -++.|+.-+..+| |.+-.+|+.
T Consensus 235 ~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~ 293 (384)
T 3ldg_A 235 VDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQ 293 (384)
T ss_dssp SCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGG
T ss_pred CCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChH
Confidence 478999999987652 3888888888888 456677765
No 67
>4gf2_A Erythrocyte binding antigen 140; pfeba-140, baebl, DBL, EBL, adhesin, ligand, receptor, siali binding, glycophorin C, cell adhesion; HET: GOL; 2.40A {Plasmodium falciparum}
Probab=27.01 E-value=16 Score=29.64 Aligned_cols=22 Identities=14% Similarity=0.782 Sum_probs=17.7
Q ss_pred hhhhhhhccCCCCCCcHHHHHHHHHHH
Q 034912 2 QLRDEFWDTAPHYGGRKEIWDALRAAA 28 (79)
Q Consensus 2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~ 28 (79)
+.|+++|+.- |+.||.|+-=++
T Consensus 137 ~lRedWW~~n-----r~~IW~aM~C~~ 158 (615)
T 4gf2_A 137 NIKKEWWEKN-----KANLWNHMIVNH 158 (615)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHTTT
T ss_pred ccHHHHHHHh-----hHHHHhHeeccC
Confidence 4699999977 889999996543
No 68
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=26.86 E-value=11 Score=26.77 Aligned_cols=14 Identities=43% Similarity=0.819 Sum_probs=10.0
Q ss_pred hhhccCCCCC-CcHH
Q 034912 6 EFWDTAPHYG-GRKE 19 (79)
Q Consensus 6 EFwdT~p~~~-Gr~E 19 (79)
-||||++.|+ |+.|
T Consensus 48 ~~~DTA~~Yg~G~sE 62 (327)
T 3eau_A 48 NLFDTAEVYAAGKAE 62 (327)
T ss_dssp CEEEEETTGGGGHHH
T ss_pred CEEECccccCCCChH
Confidence 3788888887 4544
No 69
>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2
Probab=26.83 E-value=74 Score=18.65 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=24.5
Q ss_pred cHHHHHHHHHHcCceeecC--------CeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQSA--------DLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~g--------~L~~~YDe~G~~Y~l 64 (79)
|++.+..-|.++|+++..+ ...-+.|-.||...|
T Consensus 78 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel 119 (139)
T 1r9c_A 78 DFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFEL 119 (139)
T ss_dssp GHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEE
T ss_pred HHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEE
Confidence 8888888899999876432 123567888888763
No 70
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=26.60 E-value=1.3e+02 Score=22.36 Aligned_cols=53 Identities=21% Similarity=0.354 Sum_probs=34.5
Q ss_pred CcHHHHHHHHHHHHh------------------cHHHHHHHHHHcC----ceeecCCeeeeeccCCCccccCceeeeCCC
Q 034912 16 GRKEIWDALRAAAEA------------------DLSLAQAIVDSAG----VIVQSADLTICYDERGAKYELPKYVLSEPT 73 (79)
Q Consensus 16 Gr~EIW~aLraA~e~------------------d~~tAq~ildaA~----itlp~g~L~~~YDe~G~~Y~lP~~vis~P~ 73 (79)
=.+++|+.++..++. -++.|+.-+..+| |.+-.+|+...- ....|+ .|+++|-
T Consensus 242 ~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~--~~~~fD---~Iv~NPP 316 (393)
T 3k0b_A 242 MPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQ--TEDEYG---VVVANPP 316 (393)
T ss_dssp SCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCC--CCCCSC---EEEECCC
T ss_pred CCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCC--CCCCCC---EEEECCC
Confidence 368999999987652 3788888888887 456677765211 112333 4777764
No 71
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=26.50 E-value=16 Score=26.27 Aligned_cols=14 Identities=43% Similarity=0.698 Sum_probs=9.9
Q ss_pred hhhccCCCCC-CcHH
Q 034912 6 EFWDTAPHYG-GRKE 19 (79)
Q Consensus 6 EFwdT~p~~~-Gr~E 19 (79)
-||||++.|+ |+.|
T Consensus 63 ~~~DTA~~Yg~G~sE 77 (317)
T 1ynp_A 63 NYLDTADLYNQGLNE 77 (317)
T ss_dssp CEEECSCBTTBCCCH
T ss_pred CeEECccccCCCchH
Confidence 3788888887 5444
No 72
>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A
Probab=26.23 E-value=99 Score=17.79 Aligned_cols=17 Identities=24% Similarity=0.360 Sum_probs=14.9
Q ss_pred cHHHHHHHHHHcCceee
Q 034912 31 DLSLAQAIVDSAGVIVQ 47 (79)
Q Consensus 31 d~~tAq~ildaA~itlp 47 (79)
|++.+..-|.++|+++.
T Consensus 98 d~~~~~~~l~~~G~~~~ 114 (148)
T 1jc4_A 98 DIDAVSATLRERGVQLL 114 (148)
T ss_dssp CHHHHHHHHHHHTCCBS
T ss_pred CHHHHHHHHHHCCCeec
Confidence 78999999999999865
No 73
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=25.77 E-value=39 Score=23.78 Aligned_cols=19 Identities=16% Similarity=0.230 Sum_probs=15.4
Q ss_pred HHHHHHHHh--------cHHHHHHHHH
Q 034912 22 DALRAAAEA--------DLSLAQAIVD 40 (79)
Q Consensus 22 ~aLraA~e~--------d~~tAq~ild 40 (79)
.|+++|++. |..||+.||.
T Consensus 240 ~Ai~aal~g~~~~~LITDe~tA~~lL~ 266 (266)
T 3efb_A 240 SGIIGALRGKYINCLVTNSSTAELLLK 266 (266)
T ss_dssp CHHHHHHHTTSCSEEEEEHHHHHHHHC
T ss_pred HHHHHHHhcCCCCEEEeCHHHHHHHhC
Confidence 478888874 9999999974
No 74
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=25.30 E-value=23 Score=25.55 Aligned_cols=14 Identities=36% Similarity=0.280 Sum_probs=10.5
Q ss_pred hhhccCCCCC-CcHH
Q 034912 6 EFWDTAPHYG-GRKE 19 (79)
Q Consensus 6 EFwdT~p~~~-Gr~E 19 (79)
-||||++.|+ |..|
T Consensus 68 ~~~DTA~~Yg~G~sE 82 (319)
T 1ur3_M 68 TTVDHADIYGGYQCE 82 (319)
T ss_dssp CEEECCSSTTTTTHH
T ss_pred CeEEcccccCCCcHH
Confidence 4899999997 4444
No 75
>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}
Probab=25.18 E-value=68 Score=18.34 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=21.5
Q ss_pred cHHHHHHHHHHcCceeecCC------eeeeeccCCCccc
Q 034912 31 DLSLAQAIVDSAGVIVQSAD------LTICYDERGAKYE 63 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~g~------L~~~YDe~G~~Y~ 63 (79)
|++.+..-|.++|+++..+. ..-+.|-.|+...
T Consensus 82 d~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~DPdG~~ie 120 (126)
T 2qqz_A 82 KIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIE 120 (126)
T ss_dssp THHHHHHHHHHTTCCCEEECSSTTEEEEEEECTTSCEEE
T ss_pred CHHHHHHHHHHcCCCccCCCCCCCeeEEEEECCCCCEEE
Confidence 78888888999998764322 1134566666554
No 76
>2dii_A TFIIH basal transcription factor complex P62 subunit; BTF2-P62, general transcription factor IIH polypeptide 1, nuclear protein; NMR {Homo sapiens} SCOP: a.240.1.1
Probab=24.95 E-value=11 Score=22.72 Aligned_cols=7 Identities=43% Similarity=1.289 Sum_probs=6.1
Q ss_pred hhhhccC
Q 034912 5 DEFWDTA 11 (79)
Q Consensus 5 ~EFwdT~ 11 (79)
+|||.|+
T Consensus 45 ~eFW~~r 51 (61)
T 2dii_A 45 EEFWANR 51 (61)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5899998
No 77
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=24.52 E-value=21 Score=26.00 Aligned_cols=14 Identities=43% Similarity=0.797 Sum_probs=10.6
Q ss_pred hhhccCCCCC---CcHH
Q 034912 6 EFWDTAPHYG---GRKE 19 (79)
Q Consensus 6 EFwdT~p~~~---Gr~E 19 (79)
-||||++.|+ |+.|
T Consensus 79 ~~~DTA~~Yg~~~G~sE 95 (353)
T 3erp_A 79 THFDLANNYGPPPGSAE 95 (353)
T ss_dssp CEEECCTTCTTTTTHHH
T ss_pred CEEEChhhhCCCCChHH
Confidence 3899999998 5555
No 78
>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}
Probab=24.24 E-value=78 Score=19.33 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHcCceeecCC-------eee-ee---ccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQSAD-------LTI-CY---DERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~g~-------L~~-~Y---De~G~~Y~l 64 (79)
|++.+.+-|.++|+++-... ... .+ |-.|+...|
T Consensus 89 Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl 133 (161)
T 3oa4_A 89 SIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEF 133 (161)
T ss_dssp CHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEE
T ss_pred CHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEE
Confidence 89999999999999884431 111 22 778887764
No 79
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=24.14 E-value=51 Score=19.80 Aligned_cols=35 Identities=11% Similarity=0.046 Sum_probs=24.3
Q ss_pred hcHHHHHHHHHHcCceeecCC-----------eeeeeccCCCcccc
Q 034912 30 ADLSLAQAIVDSAGVIVQSAD-----------LTICYDERGAKYEL 64 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~g~-----------L~~~YDe~G~~Y~l 64 (79)
.|++.+..-|.++|+.+-.+. ..-+.|-.|+...|
T Consensus 99 ~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl 144 (147)
T 3zw5_A 99 VPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEV 144 (147)
T ss_dssp SCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEE
T ss_pred cCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEE
Confidence 489999999999999874221 12456777776654
No 80
>2hfv_A Hypothetical protein RPA1041; NESG, GFT-alpha+beta, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: d.58.5.5
Probab=24.14 E-value=39 Score=21.65 Aligned_cols=16 Identities=31% Similarity=0.490 Sum_probs=14.2
Q ss_pred hcHHHHHHHHHHcCce
Q 034912 30 ADLSLAQAIVDSAGVI 45 (79)
Q Consensus 30 ~d~~tAq~ildaA~it 45 (79)
.|.+.|+.||+.+|+-
T Consensus 75 ed~~~Ar~LL~~~~~~ 90 (97)
T 2hfv_A 75 DDLAGARRLLTDAGLA 90 (97)
T ss_dssp GGHHHHHHHHHHTTCC
T ss_pred hhHHHHHHHHHHcCCc
Confidence 3899999999999983
No 81
>3iz6_M 40S ribosomal protein S18 (S13P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=24.10 E-value=15 Score=25.30 Aligned_cols=61 Identities=13% Similarity=0.285 Sum_probs=41.0
Q ss_pred CCCcHHHHHHHHHHHHhcHHHHHHHHHHcCc--eeecCCeee-----eeccCC--CccccCceeeeCCCC
Q 034912 14 YGGRKEIWDALRAAAEADLSLAQAIVDSAGV--IVQSADLTI-----CYDERG--AKYELPKYVLSEPTN 74 (79)
Q Consensus 14 ~~Gr~EIW~aLraA~e~d~~tAq~ildaA~i--tlp~g~L~~-----~YDe~G--~~Y~lP~~vis~P~N 74 (79)
.-|.+.|.-||...-=--..+|+.|+..||| ..--|+|+. .=+... ..|.+|.|.++-.-.
T Consensus 20 i~~~k~v~~ALt~I~GIG~~~A~~I~~~~gid~~~r~g~Lt~~ei~~l~~~i~~~~~~~ip~w~lNr~kD 89 (152)
T 3iz6_M 20 VDGKQKIMFALTSIKGVGRRFSNIVCKKADIDMNKRAGELSAEEMDRLMAVVHNPRQFKVPDWFLNRKKD 89 (152)
T ss_dssp CCCSSBHHHHHTTSTTCCHHHHHHHHHHHTCCSSSBTTTSCHHHHHHHHHHHHSCSSCCCCCCSCSCCCS
T ss_pred CCCCcEeHhhhhhccCcCHHHHHHHHHHcCCCCCcEeCcCCHHHHHHHHHHHHhhcccCcchhhhhhhcc
Confidence 5667777666643222378999999999999 467788861 112222 468999998875433
No 82
>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}
Probab=23.96 E-value=81 Score=19.03 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=22.5
Q ss_pred cHHHHHHHHHHcCceeecC--------C---eeeeeccCCCccc
Q 034912 31 DLSLAQAIVDSAGVIVQSA--------D---LTICYDERGAKYE 63 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~g--------~---L~~~YDe~G~~Y~ 63 (79)
|++.+.+-|.++|+++..+ . ..-+.|-.||...
T Consensus 99 dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~ie 142 (146)
T 3ct8_A 99 KVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVE 142 (146)
T ss_dssp HHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEE
T ss_pred HHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEE
Confidence 7888888899999987442 1 1245677777654
No 83
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=23.85 E-value=18 Score=26.08 Aligned_cols=14 Identities=57% Similarity=1.016 Sum_probs=10.5
Q ss_pred hhhccCCCCC-CcHH
Q 034912 6 EFWDTAPHYG-GRKE 19 (79)
Q Consensus 6 EFwdT~p~~~-Gr~E 19 (79)
-||||++.|+ |..|
T Consensus 49 ~~~DTA~~Yg~G~sE 63 (333)
T 1pz1_A 49 TLIDTAPAYGFGQSE 63 (333)
T ss_dssp CEEECCTTGGGGHHH
T ss_pred CeEECccccCCCchH
Confidence 3899999997 4444
No 84
>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*
Probab=23.80 E-value=93 Score=19.21 Aligned_cols=33 Identities=24% Similarity=0.187 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHcCceeecC-------CeeeeeccCCCccc
Q 034912 31 DLSLAQAIVDSAGVIVQSA-------DLTICYDERGAKYE 63 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~g-------~L~~~YDe~G~~Y~ 63 (79)
|++.+..-|.++|+++-.+ .+.-+.|-.|+...
T Consensus 137 dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~ie 176 (187)
T 3vw9_A 137 DVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIE 176 (187)
T ss_dssp CHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEE
T ss_pred CHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEE
Confidence 8888999999999987543 22356677777665
No 85
>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}
Probab=23.68 E-value=77 Score=19.33 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=23.8
Q ss_pred hcHHHHHHHHHHcCceeec--------CCeeeeeccCCCcccc
Q 034912 30 ADLSLAQAIVDSAGVIVQS--------ADLTICYDERGAKYEL 64 (79)
Q Consensus 30 ~d~~tAq~ildaA~itlp~--------g~L~~~YDe~G~~Y~l 64 (79)
.|++.+.+-|.++|+++-. |...-+.|-.|+...|
T Consensus 99 ~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel 141 (148)
T 2r6u_A 99 ESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGL 141 (148)
T ss_dssp SCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEE
T ss_pred CCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEE
Confidence 3899999999999998732 2223456767766553
No 86
>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*
Probab=23.42 E-value=95 Score=19.24 Aligned_cols=33 Identities=24% Similarity=0.187 Sum_probs=23.5
Q ss_pred cHHHHHHHHHHcCceeecC-------CeeeeeccCCCccc
Q 034912 31 DLSLAQAIVDSAGVIVQSA-------DLTICYDERGAKYE 63 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~g-------~L~~~YDe~G~~Y~ 63 (79)
|++.+..-|.++|+++-.+ ...-+.|-.|+...
T Consensus 134 dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~ie 173 (184)
T 2za0_A 134 DVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIE 173 (184)
T ss_dssp CHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEE
T ss_pred CHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEE
Confidence 8888999999999987432 22345677777655
No 87
>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A*
Probab=23.41 E-value=55 Score=22.36 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=18.6
Q ss_pred HHHHHHHHhcHHHHHHHHHHc
Q 034912 22 DALRAAAEADLSLAQAIVDSA 42 (79)
Q Consensus 22 ~aLraA~e~d~~tAq~ildaA 42 (79)
++|++.++.|.+.|+.+|+..
T Consensus 130 e~L~~qI~~D~~~ar~~l~~~ 150 (163)
T 1n08_A 130 DKLIEDIHTDIRVALNSMDRP 150 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 789999999999999999653
No 88
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=23.13 E-value=94 Score=18.23 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=22.7
Q ss_pred cHHHHHHHHHHcCceeecC--------CeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQSA--------DLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~g--------~L~~~YDe~G~~Y~l 64 (79)
|++.+.+-|.++|+++..+ ...-+.|-.|+...|
T Consensus 88 dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel 129 (141)
T 2rbb_A 88 AVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRI 129 (141)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEE
T ss_pred HHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEE
Confidence 5888889999999886321 112456777776653
No 89
>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1
Probab=22.88 E-value=1.4e+02 Score=20.82 Aligned_cols=37 Identities=30% Similarity=0.327 Sum_probs=26.8
Q ss_pred hhhccCCCCCC-cHHHHHHHHHHHHh---cHHHHHHHHHHcCc
Q 034912 6 EFWDTAPHYGG-RKEIWDALRAAAEA---DLSLAQAIVDSAGV 44 (79)
Q Consensus 6 EFwdT~p~~~G-r~EIW~aLraA~e~---d~~tAq~ildaA~i 44 (79)
.||+-- -.+ ..+.|+..|++++. |-+..+.||++|..
T Consensus 154 ~fy~f~--~~~d~~~~k~~fr~~Ld~l~l~~~e~~~ii~eA~~ 194 (240)
T 1we1_A 154 AFYEFA--DIDDEKAFKNTYRQAMNDLPIDQATAERIVDEAND 194 (240)
T ss_dssp GGGCCT--TCSSHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred hhcccC--CcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 455543 123 45699999999986 78888889988754
No 90
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=22.67 E-value=19 Score=25.61 Aligned_cols=8 Identities=50% Similarity=0.247 Sum_probs=4.2
Q ss_pred hhccCCCC
Q 034912 7 FWDTAPHY 14 (79)
Q Consensus 7 FwdT~p~~ 14 (79)
||||++.|
T Consensus 38 ~~DTA~~Y 45 (327)
T 1gve_A 38 EIDTAFVY 45 (327)
T ss_dssp EEECCTTG
T ss_pred EEEchhhc
Confidence 45555555
No 91
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=22.51 E-value=73 Score=19.66 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=24.3
Q ss_pred cHHHHHHHHHHcCceee-------cC-CeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQ-------SA-DLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp-------~g-~L~~~YDe~G~~Y~l 64 (79)
|++.+..-|.++|+++- .| ....+.|-.|+...|
T Consensus 100 dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel 141 (164)
T 3m2o_A 100 DPDREYARLQQAGLPILLTLRDEDFGQRHFITADPNGVLIDI 141 (164)
T ss_dssp CHHHHHHHHHHTTCCCSEEEEEC---CEEEEEECTTCCEEEE
T ss_pred CHHHHHHHHHHCCCceecCccccCCCcEEEEEECCCCCEEEE
Confidence 78888888999998762 23 223678888888765
No 92
>1wi9_A Protein C20ORF116 homolog; helix-turn-helix motif, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.4.5.47
Probab=22.35 E-value=33 Score=21.17 Aligned_cols=15 Identities=33% Similarity=0.364 Sum_probs=13.1
Q ss_pred cCCeeeeeccCCCcc
Q 034912 48 SADLTICYDERGAKY 62 (79)
Q Consensus 48 ~g~L~~~YDe~G~~Y 62 (79)
.|.|+|+.|.+|.+-
T Consensus 48 ~g~ltGViDDRGKfI 62 (72)
T 1wi9_A 48 EGTLTGVIDDRGKFI 62 (72)
T ss_dssp HSSSCEEECTTCCEE
T ss_pred CCCeEEEEeCCCCEE
Confidence 689999999999764
No 93
>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A*
Probab=22.00 E-value=1.5e+02 Score=21.14 Aligned_cols=37 Identities=19% Similarity=0.234 Sum_probs=26.5
Q ss_pred hhhccCCCCCCcH-HHHHHHHHHHHh---cHHHHHHHHHHcCc
Q 034912 6 EFWDTAPHYGGRK-EIWDALRAAAEA---DLSLAQAIVDSAGV 44 (79)
Q Consensus 6 EFwdT~p~~~Gr~-EIW~aLraA~e~---d~~tAq~ildaA~i 44 (79)
.||+-- -.++. ..|+..|++++. |-+..+.||++|..
T Consensus 185 ~Fy~f~--g~~d~~~~k~~fr~~Ld~l~ld~ee~~~iI~eA~~ 225 (264)
T 2q32_A 185 QFYLFE--NVDNAQQFKQLYRARMNALDLNMKTKERIVEEANK 225 (264)
T ss_dssp GGGCCT--TCSCHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred eeeccC--CCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 455544 23455 589999999985 77778888888754
No 94
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}
Probab=21.83 E-value=50 Score=20.05 Aligned_cols=33 Identities=12% Similarity=0.060 Sum_probs=20.8
Q ss_pred cHHHHHHHHHHcCceeecCC-------eeeeeccCCCccc
Q 034912 31 DLSLAQAIVDSAGVIVQSAD-------LTICYDERGAKYE 63 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~g~-------L~~~YDe~G~~Y~ 63 (79)
|++.+..-|.++|+++-.+- ...+.|-.|+...
T Consensus 99 dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~ie 138 (144)
T 2kjz_A 99 QVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLR 138 (144)
T ss_dssp HHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEE
T ss_pred HHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEE
Confidence 67888888889998764321 1234566665544
No 95
>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}
Probab=21.16 E-value=1.1e+02 Score=17.78 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHcCceeec-------C-CeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQS-------A-DLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~-------g-~L~~~YDe~G~~Y~l 64 (79)
|++.+..-|.++|+++.. | ....+.|-.||...|
T Consensus 78 dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel 119 (137)
T 3itw_A 78 DVDEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEF 119 (137)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEE
T ss_pred CHHHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEE
Confidence 788888888899987632 2 223678888988775
No 96
>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A*
Probab=21.11 E-value=53 Score=22.01 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=18.3
Q ss_pred HHHHHHHHHhcHHHHHHHHHH
Q 034912 21 WDALRAAAEADLSLAQAIVDS 41 (79)
Q Consensus 21 W~aLraA~e~d~~tAq~ilda 41 (79)
=++|++.++.|.+.|+.+|+.
T Consensus 111 le~L~~qI~~D~~~ar~~l~~ 131 (147)
T 1nb0_A 111 LESLISAIQGDIEEAKKRLEL 131 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 378999999999999999864
No 97
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=20.53 E-value=18 Score=26.42 Aligned_cols=14 Identities=43% Similarity=0.819 Sum_probs=10.0
Q ss_pred hhhccCCCCC-CcHH
Q 034912 6 EFWDTAPHYG-GRKE 19 (79)
Q Consensus 6 EFwdT~p~~~-Gr~E 19 (79)
-||||++.|+ |+.|
T Consensus 82 ~~~DTA~~Yg~G~sE 96 (367)
T 3lut_A 82 NLFDTAEVYAAGKAE 96 (367)
T ss_dssp CEEEEETTGGGGHHH
T ss_pred CEEECccccCCCchH
Confidence 3789998887 4444
No 98
>2zyc_A Peptidoglycan hydrolase FLGJ; 1.74A {Sphingomonas SP} PDB: 3k3t_A
Probab=20.48 E-value=1.1e+02 Score=20.68 Aligned_cols=38 Identities=24% Similarity=0.273 Sum_probs=23.8
Q ss_pred HHHHHHHHHHH-----hcHHHHHHHHHHc----Ccee----ecCCee--eeec
Q 034912 19 EIWDALRAAAE-----ADLSLAQAIVDSA----GVIV----QSADLT--ICYD 56 (79)
Q Consensus 19 EIW~aLraA~e-----~d~~tAq~ildaA----~itl----p~g~L~--~~YD 56 (79)
+|+..-+.+.+ +.+-.||+||++. .+.. +.++|- .|++
T Consensus 8 ~~~~~A~~~~~~~gI~~sv~lAQA~LESgwG~S~la~~~g~~~nNlFGIka~~ 60 (170)
T 2zyc_A 8 ATWPQAAKAAQSLGVPAHFLVAQAALETGWGKSQIRNKDGTPSYNLFNIKAGS 60 (170)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHTTTTTCCBCTTSCBCCCTTCCBCCT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHcCCCCCccccccCcccCcccCcccCC
Confidence 44554444444 2799999999986 3443 556774 4555
No 99
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=20.43 E-value=82 Score=18.33 Aligned_cols=33 Identities=15% Similarity=0.066 Sum_probs=21.6
Q ss_pred cHHHHHHHHHH---cCceeec-------CCeeeeeccCCCccc
Q 034912 31 DLSLAQAIVDS---AGVIVQS-------ADLTICYDERGAKYE 63 (79)
Q Consensus 31 d~~tAq~ilda---A~itlp~-------g~L~~~YDe~G~~Y~ 63 (79)
|++.+..-|.+ +|+++-. |....+.|-.||...
T Consensus 85 dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~ie 127 (132)
T 3sk2_A 85 DVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIR 127 (132)
T ss_dssp HHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEE
Confidence 58888888888 9998743 212245666666544
No 100
>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A
Probab=20.29 E-value=92 Score=17.96 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=23.1
Q ss_pred cHHHHHHHHHHcCcee----------ec----C-CeeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIV----------QS----A-DLTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itl----------p~----g-~L~~~YDe~G~~Y~l 64 (79)
|++.+..-|.++|+++ |. | ...-+.|-.||...|
T Consensus 68 dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel 116 (126)
T 1ecs_A 68 DLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRL 116 (126)
T ss_dssp CHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEE
T ss_pred CHHHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEE
Confidence 8888888999999873 11 2 122567777777654
No 101
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=20.27 E-value=1.3e+02 Score=16.96 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHcCceeec-------CC--eeeeeccCCCcccc
Q 034912 31 DLSLAQAIVDSAGVIVQS-------AD--LTICYDERGAKYEL 64 (79)
Q Consensus 31 d~~tAq~ildaA~itlp~-------g~--L~~~YDe~G~~Y~l 64 (79)
|++.+..-|.++|+++-. |. ..-+.|-.|+...|
T Consensus 81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel 123 (135)
T 1f9z_A 81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIEL 123 (135)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEE
T ss_pred CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEE
Confidence 788888899999998742 32 12456777877664
Done!