BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034916
MNPQTDKIVRRTTMVATAVASYFLLTADYGPEPNALDPIKKAILSAESSVKEFIFGSKKE
PREESQTAKLSSDNSKEHP

High Scoring Gene Products

Symbol, full name Information P value
AT1G01725 protein from Arabidopsis thaliana 1.5e-19

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034916
        (79 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006092 - symbol:AT1G01725 "AT1G01725" speci...   233  1.5e-19   1


>TAIR|locus:505006092 [details] [associations]
            symbol:AT1G01725 "AT1G01725" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0045892 "negative regulation
            of transcription, DNA-dependent" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC009273 UniGene:At.134
            UniGene:At.57938 EMBL:AF332440 EMBL:AY088343 IPI:IPI00529770
            PIR:F86148 RefSeq:NP_563633.1 PRIDE:Q9LQ84
            EnsemblPlants:AT1G01725.1 GeneID:839271 KEGG:ath:AT1G01725
            TAIR:At1g01725 eggNOG:NOG305563 HOGENOM:HOG000006149
            InParanoid:Q9LQ84 OMA:GPEPNAL PhylomeDB:Q9LQ84
            ProtClustDB:CLSN2687612 ArrayExpress:Q9LQ84 Genevestigator:Q9LQ84
            Uniprot:Q9LQ84
        Length = 62

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 45/62 (72%), Positives = 54/62 (87%)

Query:     1 MNPQTDKIVRRTTMVATAVASYFLLTADYGPEPNALDPIKKAILSAESSVKEFIFGSKKE 60
             MNPQ +K+V+ T++VATAV SYFLLTADYGPEPNALDPI++ ILSA+ SVKEFIF SKK 
Sbjct:     1 MNPQIEKVVKVTSVVATAVVSYFLLTADYGPEPNALDPIRQRILSAQDSVKEFIFPSKKS 60

Query:    61 PR 62
              +
Sbjct:    61 DK 62


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.308   0.123   0.330    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       79        79   0.00091  102 3  11 23  0.47    29
                                                     29  0.39    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  423 (45 KB)
  Total size of DFA:  74 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.21u 0.08s 10.29t   Elapsed:  00:00:01
  Total cpu time:  10.21u 0.08s 10.29t   Elapsed:  00:00:01
  Start:  Fri May 10 03:32:44 2013   End:  Fri May 10 03:32:45 2013

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