BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034922
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XGY4|TIM8_ARATH Mitochondrial import inner membrane translocase subunit TIM8
OS=Arabidopsis thaliana GN=TIM8 PE=1 SV=1
Length = 77
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 67/76 (88%)
Query: 1 MDNSALNSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCA 60
MD S N+ ++ QFL QEKE+AM+NEMV+K+T+VCWDKCITS PGSKFSSSES+CL +CA
Sbjct: 1 MDPSMANNPELLQFLAQEKERAMVNEMVSKMTSVCWDKCITSAPGSKFSSSESSCLTHCA 60
Query: 61 QRYLDMSVIIMKRFQS 76
QRY+DMS+IIMKRF S
Sbjct: 61 QRYMDMSMIIMKRFNS 76
>sp|P0CR94|TIM8_CRYNJ Mitochondrial import inner membrane translocase subunit TIM8
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=TIM8 PE=3 SV=1
Length = 88
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 10 QMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVI 69
+++ FL QE+ KA L + +LTN CW+ CIT SKFS SE+ CL NC R+LD S+
Sbjct: 17 ELESFLEQEQAKAKLQASIHELTNTCWNTCITGGISSKFSKSEAQCLENCVDRFLDSSLY 76
Query: 70 IMKRFQS 76
I+++ ++
Sbjct: 77 IVRQIEA 83
>sp|P0CR95|TIM8_CRYNB Mitochondrial import inner membrane translocase subunit TIM8
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=TIM8 PE=3 SV=1
Length = 88
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 10 QMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVI 69
+++ FL QE+ KA L + +LTN CW+ CIT SKFS SE+ CL NC R+LD S+
Sbjct: 17 ELESFLEQEQAKAKLQASIHELTNTCWNTCITGGISSKFSKSEAQCLENCVDRFLDSSLY 76
Query: 70 IMKRFQS 76
I+++ ++
Sbjct: 77 IVRQIEA 83
>sp|Q9Y1A3|TIM8_DROME Mitochondrial import inner membrane translocase subunit Tim8
OS=Drosophila melanogaster GN=Tim8 PE=3 SV=1
Length = 88
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 1 MDNSALNSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCA 60
+N + N ++Q+FL EK+KA +N + + +CW+KCI P +K + CL+NC
Sbjct: 4 FENLSGNDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCI-GKPSTKLDHATETCLSNCV 62
Query: 61 QRYLDMSVIIMKRFQSM 77
R++D S++I +RF M
Sbjct: 63 DRFIDTSLLITQRFAQM 79
>sp|Q6DEM5|TIM8A_DANRE Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Danio rerio GN=timm8a PE=3 SV=1
Length = 90
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 1 MDNSAL-NSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANC 59
MD + Q+QQF+ E +K ++V ++T VCW+KC+ PG K S C NC
Sbjct: 1 MDTQGVATDPQLQQFIEIESQKQRFQQLVHQMTEVCWEKCM-DKPGPKLDSRTEVCFVNC 59
Query: 60 AQRYLDMSVIIMKRFQSMQ 78
+R++D S I+ R + Q
Sbjct: 60 VERFIDTSQFILNRLEQTQ 78
>sp|Q90YI5|TIM8A_TAKRU Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Takifugu rubripes GN=timm8a PE=3 SV=1
Length = 90
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 4 SALNSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRY 63
A Q+QQF+ E +K ++V +T VCWDKC+ PG K S C NC +R+
Sbjct: 5 GASADPQLQQFIEIESQKQRFQQLVHHMTEVCWDKCM-DKPGPKLDSRAEMCFVNCVERF 63
Query: 64 LDMSVIIMKRFQSMQ 78
+D S I+ R + Q
Sbjct: 64 IDTSQFILNRLEQTQ 78
>sp|Q3ZBS8|TIM8A_BOVIN Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Bos taurus GN=TIMM8A PE=3 SV=1
Length = 97
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 9 AQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSV 68
Q+Q F+ E +K ++V ++T +CW+KC+ PG K S AC NC +R++D S
Sbjct: 17 PQLQHFIEVETQKQRFQQLVHQMTELCWEKCM-DKPGPKLDSRAEACFVNCVERFIDTSQ 75
Query: 69 IIMKRFQSMQ 78
I+ R + Q
Sbjct: 76 FILNRLEQTQ 85
>sp|O60220|TIM8A_HUMAN Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Homo sapiens GN=TIMM8A PE=1 SV=1
Length = 97
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 9 AQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSV 68
Q+Q F+ E +K ++V ++T +CW+KC+ PG K S AC NC +R++D S
Sbjct: 17 PQLQHFIEVETQKQRFQQLVHQMTELCWEKCM-DKPGPKLDSRAEACFVNCVERFIDTSQ 75
Query: 69 IIMKRFQSMQ 78
I+ R + Q
Sbjct: 76 FILNRLEQTQ 85
>sp|Q9WVA2|TIM8A_MOUSE Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Mus musculus GN=Timm8a1 PE=1 SV=1
Length = 97
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 9 AQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSV 68
Q+Q F+ E +K ++V ++T +CW+KC+ PG K S AC NC +R++D S
Sbjct: 17 PQLQHFIEVETQKQRFQQLVHQMTELCWEKCM-DKPGPKLDSRAEACFVNCVERFIDTSQ 75
Query: 69 IIMKRFQSMQ 78
I+ R + Q
Sbjct: 76 FILNRLEQTQ 85
>sp|Q9WVA1|TIM8A_RAT Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Rattus norvegicus GN=Timm8a PE=1 SV=1
Length = 97
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 9 AQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSV 68
Q+Q F+ E +K ++V ++T +CW+KC+ PG K S AC NC +R++D S
Sbjct: 17 PQLQHFIEVETQKQRFQQLVHQMTELCWEKCM-DKPGPKLDSRAEACFVNCVERFIDTSQ 75
Query: 69 IIMKRFQSMQ 78
I+ R + Q
Sbjct: 76 FILNRLEQTQ 85
>sp|Q66L32|TIM8A_XENLA Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Xenopus laevis GN=timm8a PE=3 SV=1
Length = 94
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 4 SALNSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRY 63
S +A++Q+ L E++KA V +VCWDKCI PG+K S +CL +C R+
Sbjct: 16 SPAEAAELQRMLAVEQQKAQFTAQVHNFMDVCWDKCI-DRPGNKLDSRTESCLVSCVDRF 74
Query: 64 LDMSVIIMKRF 74
+D ++ I RF
Sbjct: 75 IDTTLSITNRF 85
>sp|Q4IJW4|TIM8_GIBZE Mitochondrial import inner membrane translocase subunit TIM8
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=TIM8 PE=3 SV=1
Length = 93
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 7 NSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITST-PGSKFSSSESACLANCAQRYLD 65
+ +++QFL E++++ + LT +CW KC+ T K SE CLANC +R+LD
Sbjct: 20 DRTELRQFLANEQQRSQIQAQTHSLTQMCWSKCVPGTIKNPKLDKSEETCLANCVERFLD 79
Query: 66 MSVIIMKRFQSMQ 78
++ + MK M+
Sbjct: 80 VNYLTMKHLNGMR 92
>sp|P62078|TIM8B_RAT Mitochondrial import inner membrane translocase subunit Tim8 B
OS=Rattus norvegicus GN=Timm8b PE=3 SV=1
Length = 83
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 7 NSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDM 66
+ A++Q+ + E++KA V +CWDKC+ PGS+ S CL++C R++D
Sbjct: 8 DEAELQRLVAAEQQKAQFTAQVHHFMELCWDKCV-EKPGSRLDSRTENCLSSCVDRFIDT 66
Query: 67 SVIIMKRF 74
++ I RF
Sbjct: 67 TLAITGRF 74
>sp|P62077|TIM8B_MOUSE Mitochondrial import inner membrane translocase subunit Tim8 B
OS=Mus musculus GN=Timm8b PE=3 SV=1
Length = 83
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 7 NSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDM 66
+ A++Q+ + E++KA V +CWDKC+ PGS+ S CL++C R++D
Sbjct: 8 DEAELQRLVAAEQQKAQFTAQVHHFMELCWDKCV-EKPGSRLDSRTENCLSSCVDRFIDT 66
Query: 67 SVIIMKRF 74
++ I RF
Sbjct: 67 TLAITGRF 74
>sp|Q09783|TIM8_SCHPO Mitochondrial import inner membrane translocase subunit tim8
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim8 PE=3 SV=1
Length = 98
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 2 DNSALNSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQ 61
D S ++ +F+ E++K L + + + T+ CW KCI + G+K SE CL NC +
Sbjct: 11 DLSESEQLELSKFIESEQQKVKLQQAIHQFTSTCWPKCIGNI-GNKLDKSEEQCLQNCVE 69
Query: 62 RYLDMSVIIMKRF 74
R+LD + I+KR+
Sbjct: 70 RFLDCNFHIIKRY 82
>sp|Q4FZG7|TI8AB_MOUSE Putative mitochondrial import inner membrane translocase subunit
Tim8 A-B OS=Mus musculus GN=Timm8a2 PE=3 SV=1
Length = 97
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 7 NSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDM 66
+ Q+Q+F+ E +K + ++ +T +CW+KC+ PG + CL NC +R++D
Sbjct: 15 SDPQLQRFMEAEVQKQRVQLLIHHMTELCWEKCM-DKPGPRLDGRAELCLVNCVERFIDT 73
Query: 67 SVIIMKRFQSMQ 78
S I+ R + Q
Sbjct: 74 SQFILNRLEQTQ 85
>sp|Q3SZ93|TIM8B_BOVIN Mitochondrial import inner membrane translocase subunit Tim8 B
OS=Bos taurus GN=TIMM8B PE=3 SV=1
Length = 83
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 7 NSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDM 66
+ A++Q+ + E++KA V +CWDKC+ PG++ S CL++C R++D
Sbjct: 8 DEAELQRLVAAEQQKAQFTAQVHHFMELCWDKCV-EKPGNRLDSRTENCLSSCVDRFIDT 66
Query: 67 SVIIMKRF 74
++ I RF
Sbjct: 67 TLAITSRF 74
>sp|Q9Y5J9|TIM8B_HUMAN Mitochondrial import inner membrane translocase subunit Tim8 B
OS=Homo sapiens GN=TIMM8B PE=1 SV=1
Length = 83
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 7 NSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDM 66
+ A++Q+ + E++KA V +CWDKC+ PG++ S CL++C R++D
Sbjct: 8 DEAELQRLVAAEQQKAQFTAQVHHFMELCWDKCV-EKPGNRLDSRTENCLSSCVDRFIDT 66
Query: 67 SVIIMKRF 74
++ I RF
Sbjct: 67 TLAITSRF 74
>sp|Q6CWH5|TIM8_KLULA Mitochondrial import inner membrane translocase subunit TIM8
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM8
PE=3 SV=1
Length = 87
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 14 FLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVIIMKR 73
FL E K + + + TN+C+ CI++ + SS E CL NC R+LD ++ I+K
Sbjct: 23 FLESENSKQKVQMSIHQFTNLCFKNCISNVQNADLSSQEEQCLNNCVNRFLDTNIRIVKG 82
Query: 74 FQSMQ 78
QS+Q
Sbjct: 83 LQSIQ 87
>sp|P57744|TIM8_YEAST Mitochondrial import inner membrane translocase subunit TIM8
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TIM8 PE=1 SV=1
Length = 87
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 10 QMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVI 69
++ FL E K + + + TN+C+ KC+ S S SS E CL+NC R+LD ++
Sbjct: 19 EIATFLEGENSKQKVQMSIHQFTNICFKKCVESVNDSNLSSQEEQCLSNCVNRFLDTNIR 78
Query: 70 IMKRFQSMQ 78
I+ Q+ +
Sbjct: 79 IVNGLQNTR 87
>sp|Q75DU7|TIM8_ASHGO Mitochondrial import inner membrane translocase subunit TIM8
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM8 PE=3 SV=1
Length = 87
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 14 FLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVIIMKR 73
FL E K + + + TN+C+ CI S + S+ E+ CL +C R+LD ++ I+K
Sbjct: 23 FLETENSKQKVQMSIHQFTNLCFKNCIHSVQSADLSAQENQCLKDCVNRFLDTNIRIVKG 82
Query: 74 FQSMQ 78
QS+Q
Sbjct: 83 LQSIQ 87
>sp|Q9Y8C0|TIM8_NEUCR Mitochondrial import inner membrane translocase subunit tim-8
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-8 PE=1 SV=1
Length = 92
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 10 QMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITST-PGSKFSSSESACLANCAQRYLDMSV 68
+++ F++ E ++ + LT+ CW KC+TS ++ +E+ C+A+C +R+LD+++
Sbjct: 18 ELRGFISNETQRQRVQGQTHALTDSCWKKCVTSPIKTNQLDKTEAVCMADCVERFLDVNL 77
Query: 69 IIMKRFQSM 77
IM Q +
Sbjct: 78 TIMAHVQKI 86
>sp|Q6FK81|TIM8_CANGA Mitochondrial import inner membrane translocase subunit TIM8
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM8 PE=3 SV=1
Length = 87
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%)
Query: 10 QMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVI 69
++ +L+ E K + + + T++C+ KCI+ SS E CLA+C R+LD ++
Sbjct: 19 EIAAYLDAENSKQKVRTSINQFTDICFKKCISRVDNGNLSSQEEECLASCVNRFLDTNIR 78
Query: 70 IMKRFQSMQ 78
+++ Q+ Q
Sbjct: 79 VVRGLQNSQ 87
>sp|Q10481|TIM13_SCHPO Mitochondrial import inner membrane translocase subunit tim13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim13 PE=3 SV=1
Length = 95
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 15 LNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVIIMKRF 74
+ QE A E+++K+ C+DKCI PGS F +E +C++ C +RY+D I+ + +
Sbjct: 25 IRQELAVAQAGELISKINENCFDKCIPE-PGSTFDPNEKSCVSKCMERYMDAWNIVSRTY 83
Query: 75 QS 76
S
Sbjct: 84 IS 85
>sp|Q61BP6|TIM10_CAEBR Mitochondrial import inner membrane translocase subunit Tim10
OS=Caenorhabditis briggsae GN=tin-10 PE=3 SV=1
Length = 86
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 7 NSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCI-TSTPGSKFSSSESACLANCAQRYLD 65
AQM Q E E M+++M ++TN C KCI T+ S+ + E+ CL C +YLD
Sbjct: 3 TDAQMAQVAELEVE--MMSDMYRRMTNACQAKCIATAFKESELTKGEAVCLDRCVAKYLD 60
Query: 66 MSVIIMKRFQSM 77
+ + KR SM
Sbjct: 61 VHEKLGKRLTSM 72
>sp|Q9Y0V6|TIM10_CAEEL Mitochondrial import inner membrane translocase subunit Tim10
OS=Caenorhabditis elegans GN=tin-10 PE=3 SV=1
Length = 86
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 7 NSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCI-TSTPGSKFSSSESACLANCAQRYLD 65
AQM Q E E M+++M ++TN C KCI T+ S+ + E+ CL C +YLD
Sbjct: 3 TDAQMAQVAELEVE--MMSDMYRRMTNSCQAKCIATAFRESELTKGEAVCLDRCVAKYLD 60
Query: 66 MSVIIMKRFQSM 77
+ + KR SM
Sbjct: 61 VHEKLGKRLTSM 72
>sp|Q616Q2|TIM8_CAEBR Mitochondrial import inner membrane translocase subunit tim-8
OS=Caenorhabditis briggsae GN=tim-8 PE=3 SV=1
Length = 83
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 9 AQMQQFLNQ---EKEKAMLNEMVAKLTNVCWDKCITS-TPGSKFSSSESACLANCAQRYL 64
Q+ +FL+Q E ++ E V LT CWD C + P SK C+ NC R +
Sbjct: 6 PQLARFLHQLQAETQRQKFTEQVHTLTGRCWDVCFSDYRPPSKMDGKTQTCIQNCVNRMI 65
Query: 65 DMSVIIMKRFQSM 77
D S +++ M
Sbjct: 66 DASNFMVEHLSKM 78
>sp|Q6BN23|TIM8_DEBHA Mitochondrial import inner membrane translocase subunit TIM8
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM8 PE=3 SV=1
Length = 90
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 13 QFLNQEKEKAMLNEMVAKLTNVCWDKCITSTP--GSKFSSSESACLANCAQRYLDMSVII 70
QF+ E K+ + + T++C+ KC + P SSE CL NC R+LD ++ +
Sbjct: 22 QFIESENSKSKVQMSIHNFTDMCFKKCNANKPITSGTLDSSEEQCLTNCLNRFLDTNIKV 81
Query: 71 MKRFQSMQ 78
++ Q Q
Sbjct: 82 VQALQGAQ 89
>sp|Q59R24|TIM9_CANAL Mitochondrial import inner membrane translocase subunit TIM9
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=TIM9 PE=3 SV=1
Length = 110
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 10 QMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVI 69
+ QQ + Q++ K +N + + L + C+D C+ + +S E++C+A C++++L S
Sbjct: 11 EFQQIVEQKQMKDFMN-LYSNLVSRCFDDCVNDFTSNSLTSKETSCIAKCSEKFLKHSER 69
Query: 70 IMKRFQ 75
+ +RFQ
Sbjct: 70 VGQRFQ 75
>sp|Q9N408|TIM8_CAEEL Mitochondrial import inner membrane translocase subunit tim-8
OS=Caenorhabditis elegans GN=tim-8 PE=3 SV=1
Length = 83
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 8 SAQMQQFLNQ---EKEKAMLNEMVAKLTNVCWDKCITS-TPGSKFSSSESACLANCAQRY 63
Q+ +FL Q E ++ E V LT CWD C P SK C+ NC R
Sbjct: 5 DPQLNRFLQQLQAETQRQKFTEQVHTLTGRCWDVCFADYRPPSKMDGKTQTCIQNCVNRM 64
Query: 64 LDMSVIIMKRFQSM 77
+D S +++ M
Sbjct: 65 IDASNFMVEHLSKM 78
>sp|Q5AZH4|TIM13_EMENI Mitochondrial import inner membrane translocase subunit tim13
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=tim13 PE=3 SV=1
Length = 108
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 15 LNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYL 64
L QE A ++++K+ C++ CIT+ PGS S+SES CL++C ++Y+
Sbjct: 32 LQQEMAMANAKKLISKVNQNCFENCITA-PGSSLSASESTCLSSCMEKYI 80
>sp|Q757S0|TIM9_ASHGO Mitochondrial import inner membrane translocase subunit TIM9
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM9 PE=3 SV=1
Length = 87
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 5 ALNSAQMQQFLNQEKEKAMLN--EMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQR 62
ALNS + Q+F ++K M + + + L C+ C+ SK +S E C+ C+++
Sbjct: 3 ALNSREQQEFQRVVEQKQMKDFMRLYSNLVERCFSDCVNDFTSSKLTSKEQTCIMRCSEK 62
Query: 63 YLDMSVIIMKRFQ 75
+L S + +RFQ
Sbjct: 63 FLKHSERVGQRFQ 75
>sp|Q9P7K0|TIM9_SCHPO Mitochondrial import inner membrane translocase subunit tim9
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim9 PE=3 SV=1
Length = 84
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 5 ALNSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYL 64
L + Q++++LN M + LT C+ C+ SK S+ ES C+A CA ++L
Sbjct: 15 VLEAKQLKEYLN----------MYSTLTQNCFSDCVQDFTSSKLSNKESECIAKCADKFL 64
Query: 65 DMSVIIMKRF 74
S + +RF
Sbjct: 65 KHSERVGQRF 74
>sp|Q59MI8|TIM8_CANAL Mitochondrial import inner membrane translocase subunit TIM8
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=TIM8 PE=3 SV=2
Length = 88
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 10 QMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTP--GSKFSSSESACLANCAQRYLDMS 67
++ QF+ E+ K+ + + T++C+ KC P + E ACL NC R+LD +
Sbjct: 19 EIMQFVESEQSKSKVQSSIHNFTDMCFKKCNKDKPITSATLDGQEEACLKNCLNRFLDTN 78
Query: 68 VIIMKRFQS 76
+ +++ Q
Sbjct: 79 IKVVEALQG 87
>sp|Q9VTN3|TIM13_DROME Mitochondrial import inner membrane translocase subunit Tim13
OS=Drosophila melanogaster GN=Tim13 PE=3 SV=1
Length = 92
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 QFLNQEKEKAML---NEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLD 65
+ +NQ K++ L EM++K+T C+ KCI PG S+E C++ C R++D
Sbjct: 10 ELMNQVKQQIALANAQEMLSKMTEKCFKKCI-QKPGKSLDSTEQRCISQCMDRFMD 64
>sp|P87108|TIM10_YEAST Mitochondrial import inner membrane translocase subunit TIM10
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TIM10 PE=1 SV=1
Length = 93
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 18 EKEKAMLNEMVAKLTNVCWDKCI-TSTPGSKFSSSESACLANCAQRYLDMSVIIMKRFQS 76
E E ++ +M KL N C+ KCI TS + + +ES+CL C +Y + +V + + Q
Sbjct: 23 EAELDLVTDMFNKLVNNCYKKCINTSYSEGELNKNESSCLDRCVAKYFETNVQVGENMQK 82
Query: 77 M 77
M
Sbjct: 83 M 83
>sp|Q9W2D6|TIM10_DROME Mitochondrial import inner membrane translocase subunit Tim10
OS=Drosophila melanogaster GN=Tim10 PE=3 SV=1
Length = 92
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 4 SALNSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPG-SKFSSSESACLANCAQR 62
S + A++Q L QE E M++++ ++TN C KCI S+ E C+ C +
Sbjct: 7 STADQAKLQ--LMQEMEIEMMSDLYNRMTNACHKKCIPPRYSESELGKGEMVCIDRCVAK 64
Query: 63 YLDMSVIIMKRFQSM 77
YLD+ I K+ +M
Sbjct: 65 YLDIHEKIGKKLTAM 79
>sp|O74700|TIM9_YEAST Mitochondrial import inner membrane translocase subunit TIM9
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TIM9 PE=1 SV=1
Length = 87
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 5 ALNSAQMQQFLNQEKEKAMLN--EMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQR 62
ALNS + Q+F ++K M + + + L C+ C+ SK ++ E C+ C+++
Sbjct: 3 ALNSKEQQEFQKVVEQKQMKDFMRLYSNLVERCFTDCVNDFTTSKLTNKEQTCIMKCSEK 62
Query: 63 YLDMSVIIMKRFQ 75
+L S + +RFQ
Sbjct: 63 FLKHSERVGQRFQ 75
>sp|Q4I6B0|TIM13_GIBZE Mitochondrial import inner membrane translocase subunit TIM13
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=TIM13 PE=3 SV=1
Length = 82
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 1 MDNSALNSAQMQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCA 60
MD++ + +A ++Q + QE ++ KL C++KC+ PG+ SS E+ C+ +C
Sbjct: 1 MDSTQVKAAVIKQ-VQQEANLVNARTLIEKLQETCFEKCVPK-PGTSLSSGETTCMTSCM 58
Query: 61 QRYL 64
++Y+
Sbjct: 59 EKYM 62
>sp|Q6DGJ3|TIM13_DANRE Mitochondrial import inner membrane translocase subunit Tim13
OS=Danio rerio GN=timm13 PE=2 SV=1
Length = 95
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 26 EMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLD 65
E++ ++T+ C+ KCI PGS +SE C+A C RY+D
Sbjct: 37 ELLQRMTDKCFKKCI-GKPGSTLDNSEQKCIAMCMDRYMD 75
>sp|O45319|TIM13_CAEEL Mitochondrial import inner membrane translocase subunit tim-13
OS=Caenorhabditis elegans GN=tin-13 PE=3 SV=1
Length = 108
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 6 LNSAQMQQFLNQEKEKAML---NEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQR 62
L+ Q +Q ++ K++A L +V ++ C +KCIT+ PGS +S E CL C R
Sbjct: 13 LSPEQQEQVISGVKQQAALANAQNLVTDISEKCTNKCITA-PGSSLASGEKQCLQRCMDR 71
Query: 63 YLD----MSVIIMKRFQ 75
+++ +S + KR Q
Sbjct: 72 FMESWNLVSQTLQKRLQ 88
>sp|Q6FRT3|TIM9_CANGA Mitochondrial import inner membrane translocase subunit TIM9
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM9 PE=3 SV=1
Length = 87
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 6 LNSAQMQQF--LNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRY 63
LN+ + Q+F L ++K+ + + L C+ C+ SK +S E +C+ C++++
Sbjct: 4 LNAKEQQEFQKLVEQKQMKDFMRLYSGLVERCFTDCVNDFTSSKLTSKEESCILKCSEKF 63
Query: 64 LDMSVIIMKRFQ 75
L S + +RFQ
Sbjct: 64 LKHSERVGQRFQ 75
>sp|Q8AVK1|TI13B_XENLA Mitochondrial import inner membrane translocase subunit Tim13-B
OS=Xenopus laevis GN=timm13-b PE=3 SV=1
Length = 96
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 26 EMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVIIMKRFQS 76
E++ ++T+ C+ KCI PG +SE C+A C RY+D I+ + + S
Sbjct: 38 ELLQRMTDKCFRKCI-GKPGGSLDNSEQKCVAMCMDRYMDAWNIVSRAYNS 87
>sp|Q4PGT2|TIM13_USTMA Mitochondrial import inner membrane translocase subunit TIM13
OS=Ustilago maydis (strain 521 / FGSC 9021) GN=TIM13
PE=3 SV=1
Length = 108
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 20 EKAMLN--EMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVII 70
E AM N +++ K T C+ KCI + PG+ S E CL C +RY + I+
Sbjct: 32 ELAMANAQQLITKATEKCYSKCIPA-PGASLSGKEQTCLTRCMERYFEAFNIV 83
>sp|Q9Y5L4|TIM13_HUMAN Mitochondrial import inner membrane translocase subunit Tim13
OS=Homo sapiens GN=TIMM13 PE=1 SV=1
Length = 95
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 26 EMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLD 65
E++ ++T+ C+ KCI PG +SE C+A C RY+D
Sbjct: 37 ELLQRMTDKCFRKCI-GKPGGSLDNSEQKCIAMCMDRYMD 75
>sp|P57745|TIM9_ZYGBA Mitochondrial import inner membrane translocase subunit Tim9
OS=Zygosaccharomyces bailii GN=TIM9 PE=3 SV=1
Length = 87
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 5 ALNSAQMQQF--LNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQR 62
+LN + Q+F L + K+ + + L C+ C+ SK +S E C++ C+++
Sbjct: 3 SLNPREQQEFSKLIEHKQMKDFMRLYSNLVERCFTDCVNDFTSSKLTSKEQTCISRCSEK 62
Query: 63 YLDMSVIIMKRFQ 75
+L S + RFQ
Sbjct: 63 FLKHSERVGLRFQ 75
>sp|P62076|TIM13_RAT Mitochondrial import inner membrane translocase subunit Tim13
OS=Rattus norvegicus GN=Timm13 PE=3 SV=1
Length = 95
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 26 EMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLD 65
E++ ++T+ C+ KCI PG +SE C+A C RY+D
Sbjct: 37 ELLQRMTDKCFRKCI-GKPGGSLDNSEQKCIAMCMDRYMD 75
>sp|P62075|TIM13_MOUSE Mitochondrial import inner membrane translocase subunit Tim13
OS=Mus musculus GN=Timm13 PE=1 SV=1
Length = 95
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 26 EMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLD 65
E++ ++T+ C+ KCI PG +SE C+A C RY+D
Sbjct: 37 ELLQRMTDKCFRKCI-GKPGGSLDNSEQKCIAMCMDRYMD 75
>sp|Q6GPY0|TI13A_XENLA Mitochondrial import inner membrane translocase subunit Tim13-A
OS=Xenopus laevis GN=timm13-a PE=3 SV=2
Length = 96
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 26 EMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLD 65
E++ ++T+ C+ KCI PG +SE C+A C RY+D
Sbjct: 38 ELLQRMTDKCFRKCI-GKPGGSLDNSEQKCIAMCMDRYMD 76
>sp|Q6BU42|TIM9_DEBHA Mitochondrial import inner membrane translocase subunit TIM9
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM9 PE=3 SV=2
Length = 88
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 11 MQQFLNQEKEKAMLNEMVAKLTNVCWDKCITSTPGSKFSSSESACLANCAQRYLDMSVII 70
QQ + Q++ K + + + L + C+D C+ + ++ E+ C+ C++++L S +
Sbjct: 12 FQQIVEQKQMKDFM-RLYSNLVSKCFDDCVNDFTSNNLTTKETGCITKCSEKFLKHSERV 70
Query: 71 MKRFQS 76
+RFQ
Sbjct: 71 GQRFQE 76
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.122 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,087,376
Number of Sequences: 539616
Number of extensions: 521692
Number of successful extensions: 1999
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1880
Number of HSP's gapped (non-prelim): 114
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)