BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034937
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GXX0|ERV1_ARATH FAD-linked sulfhydryl oxidase ERV1 OS=Arabidopsis thaliana GN=ERV1
PE=1 SV=1
Length = 191
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 65/79 (82%), Gaps = 8/79 (10%)
Query: 1 MAILSRM--------HFKEVLRANPVQAESHDEFSQWLCHVHNVVNRSLGKLVFPCERVD 52
M ILSRM HFKE+LR+NP QA S +EFSQWLCHVHN VNRSLGKLVFPCERVD
Sbjct: 110 MTILSRMYPCRECADHFKEILRSNPAQAGSQEEFSQWLCHVHNTVNRSLGKLVFPCERVD 169
Query: 53 ARWGKLECEQRACDLQGTT 71
ARWGKLECEQ++CDL GT+
Sbjct: 170 ARWGKLECEQKSCDLHGTS 188
>sp|P55789|ALR_HUMAN FAD-linked sulfhydryl oxidase ALR OS=Homo sapiens GN=GFER PE=1 SV=2
Length = 205
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 26 FSQWLCHVHNVVNRSLGKLVFPCERVDARW 55
F+QWLCH+HN VNR LGK F C +VD RW
Sbjct: 166 FTQWLCHLHNEVNRKLGKPDFDCSKVDERW 195
>sp|Q63042|ALR_RAT FAD-linked sulfhydryl oxidase ALR OS=Rattus norvegicus GN=Gfer PE=1
SV=2
Length = 198
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 10 KEVLRANPVQAESHDEFSQWLCHVHNVVNRSLGKLVFPCERVDARW 55
K + R+ P + FSQWLC +HN VNR LGK F C RVD RW
Sbjct: 144 KRIDRSQP-DTSTRVSFSQWLCRLHNEVNRKLGKPDFDCSRVDERW 188
>sp|P56213|ALR_MOUSE FAD-linked sulfhydryl oxidase ALR OS=Mus musculus GN=Gfer PE=2 SV=2
Length = 198
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 22/30 (73%)
Query: 26 FSQWLCHVHNVVNRSLGKLVFPCERVDARW 55
FSQWLC +HN VNR LGK F C RVD RW
Sbjct: 159 FSQWLCRLHNEVNRKLGKPDFDCSRVDERW 188
>sp|P27882|ERV1_YEAST Mitochondrial FAD-linked sulfhydryl oxidase ERV1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ERV1 PE=1
SV=2
Length = 189
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 9 FKEVLRANPVQAESHDEFSQWLCHVHNVVNRSLGKLVFPCERVDARW 55
F++ +R N Q ES +E +W+C HN VN+ L K F C + RW
Sbjct: 137 FEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRW 183
>sp|Q12284|ERV2_YEAST FAD-linked sulfhydryl oxidase ERV2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV2 PE=1 SV=1
Length = 196
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 HFKEVLRANPVQAESHDEFSQWLCHVHNVVNRSLGKLVFPCERV 51
HF +++ PVQ S + W CH+HN VN L K ++ C +
Sbjct: 127 HFVKLIEKYPVQTSSRTAAAMWGCHIHNKVNEYLKKDIYDCATI 170
>sp|O14144|ERV1_SCHPO Mitochondrial FAD-linked sulfhydryl oxidase erv1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=erv1 PE=3 SV=1
Length = 182
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 15 ANPVQAESHDEFSQWLCHVHNVVNRSLGKLVFPCE 49
N + +S + +W+C HN VN LGK +F C+
Sbjct: 137 GNSPRVDSRESLCEWICEAHNDVNERLGKPLFNCQ 171
>sp|Q9Y806|ERV2_SCHPO FAD-linked sulfhydryl oxidase erv2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=erv2 PE=3 SV=1
Length = 192
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 9 FKEVLRANPVQAESHDEFSQWLCHVHNVVNRSLGKLVFPCERVDARW 55
+++L +P Q S + W C VHN +N + + C+ + R+
Sbjct: 116 LQKILDVHPPQTSSRKAATTWACKVHNQLNEKMNQPKTSCDGFNERY 162
>sp|Q9JFM9|FLSO_ASFM2 FAD-linked sulfhydryl oxidase OS=African swine fever virus
(isolate Tick/Malawi/Lil 20-1/1983) GN=Mal-081 PE=2
SV=1
Length = 119
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 6 RMHFKEVLRANPVQAESHDEFSQWLCHVHNVVNRSLGKLV 45
R H L NP+ + ++F W HN VN+ L K +
Sbjct: 48 RHHAFSYLTKNPLTLNNSEDFQYWTFAFHNNVNKRLNKKI 87
>sp|P0C8G8|FLSO_ASFK5 FAD-linked sulfhydryl oxidase OS=African swine fever virus
(isolate Pig/Kenya/KEN-50/1950) GN=Ken-085 PE=2 SV=1
Length = 119
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 6 RMHFKEVLRANPVQAESHDEFSQWLCHVHNVVNRSLGKLV 45
R H L NP+ + ++F W HN VN+ L K +
Sbjct: 48 RHHAFSYLTKNPLTLNNSEDFQYWTFAFHNNVNKRLNKKI 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.134 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,361,760
Number of Sequences: 539616
Number of extensions: 861028
Number of successful extensions: 2273
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2262
Number of HSP's gapped (non-prelim): 11
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)