BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034947
(78 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|145329170|ref|NP_001077914.1| putative small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|330251707|gb|AEC06801.1| putative small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 78
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/78 (94%), Positives = 76/78 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 61 HIKKNTRKPLGFFSKETT 78
IKKNTRKPLGF+SKETT
Sbjct: 61 SIKKNTRKPLGFYSKETT 78
>gi|242051601|ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [Sorghum bicolor]
gi|241926921|gb|EES00066.1| hypothetical protein SORBIDRAFT_03g001950 [Sorghum bicolor]
Length = 88
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/71 (94%), Positives = 70/71 (98%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI 60
Query: 61 HIKKNTRKPLG 71
++KKNTRK LG
Sbjct: 61 NVKKNTRKSLG 71
>gi|15224217|ref|NP_179464.1| putative small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|297836770|ref|XP_002886267.1| hypothetical protein ARALYDRAFT_900374 [Arabidopsis lyrata subsp.
lyrata]
gi|4185140|gb|AAD08943.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|21592486|gb|AAM64436.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|26452632|dbj|BAC43399.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|28973515|gb|AAO64082.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|297332107|gb|EFH62526.1| hypothetical protein ARALYDRAFT_900374 [Arabidopsis lyrata subsp.
lyrata]
gi|330251706|gb|AEC06800.1| putative small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 88
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/71 (95%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 61 HIKKNTRKPLG 71
IKKNTRKPLG
Sbjct: 61 SIKKNTRKPLG 71
>gi|282848216|gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatropha curcas]
Length = 88
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/71 (94%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK TRK LG
Sbjct: 61 NVKKKTRKSLG 71
>gi|195606896|gb|ACG25278.1| small nuclear ribonucleoprotein E [Zea mays]
gi|195611048|gb|ACG27354.1| small nuclear ribonucleoprotein E [Zea mays]
gi|413947730|gb|AFW80379.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 61 HIKKNTRKPLG 71
++KKNTRK LG
Sbjct: 61 NVKKNTRKSLG 71
>gi|357145040|ref|XP_003573502.1| PREDICTED: small nuclear ribonucleoprotein E-like [Brachypodium
distachyon]
Length = 88
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 61 HIKKNTRKPLG 71
++KKNTRK LG
Sbjct: 61 NVKKNTRKSLG 71
>gi|225455956|ref|XP_002278114.1| PREDICTED: small nuclear ribonucleoprotein E [Vitis vinifera]
gi|297734216|emb|CBI15463.3| unnamed protein product [Vitis vinifera]
Length = 88
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA+TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MATTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KKNT+K LG
Sbjct: 61 NVKKNTKKTLG 71
>gi|195638708|gb|ACG38822.1| small nuclear ribonucleoprotein E [Zea mays]
gi|223945527|gb|ACN26847.1| unknown [Zea mays]
gi|414875728|tpg|DAA52859.1| TPA: Small nuclear ribonucleoprotein E isoform 1 [Zea mays]
gi|414875729|tpg|DAA52860.1| TPA: Small nuclear ribonucleoprotein E isoform 2 [Zea mays]
Length = 88
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 61 HIKKNTRKPLG 71
++KKNTRK LG
Sbjct: 61 NVKKNTRKTLG 71
>gi|255581898|ref|XP_002531748.1| Small nuclear ribonucleoprotein E, putative [Ricinus communis]
gi|223528618|gb|EEF30637.1| Small nuclear ribonucleoprotein E, putative [Ricinus communis]
Length = 86
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/71 (94%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK TRK LG
Sbjct: 61 NVKKKTRKTLG 71
>gi|357146132|ref|XP_003573886.1| PREDICTED: small nuclear ribonucleoprotein E-like [Brachypodium
distachyon]
Length = 88
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD+RIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 61 HIKKNTRKPLG 71
+IKKNTRK LG
Sbjct: 61 NIKKNTRKSLG 71
>gi|313586495|gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasiliensis]
Length = 88
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/71 (94%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
+IKK TRK LG
Sbjct: 61 NIKKKTRKSLG 71
>gi|18417572|ref|NP_567844.1| small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|297798942|ref|XP_002867355.1| hypothetical protein ARALYDRAFT_913445 [Arabidopsis lyrata subsp.
lyrata]
gi|21593343|gb|AAM65292.1| small nuclear ribonucleoprotein homolog [Arabidopsis thaliana]
gi|51968366|dbj|BAD42875.1| small nuclear ribonucleoprotein homolog [Arabidopsis thaliana]
gi|51968768|dbj|BAD43076.1| small nuclear ribonucleoprotein homolog [Arabidopsis thaliana]
gi|51971773|dbj|BAD44551.1| small nuclear ribonucleoprotein homolog [Arabidopsis thaliana]
gi|88010920|gb|ABD38873.1| At4g30330 [Arabidopsis thaliana]
gi|297313191|gb|EFH43614.1| hypothetical protein ARALYDRAFT_913445 [Arabidopsis lyrata subsp.
lyrata]
gi|332660353|gb|AEE85753.1| small nuclear ribonucleoprotein E [Arabidopsis thaliana]
Length = 88
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/71 (94%), Positives = 68/71 (95%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 61 HIKKNTRKPLG 71
IKK TRKPLG
Sbjct: 61 SIKKKTRKPLG 71
>gi|7269933|emb|CAB81026.1| small nuclear ribonucleoprotein homolog [Arabidopsis thaliana]
Length = 86
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/71 (94%), Positives = 68/71 (95%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 61 HIKKNTRKPLG 71
IKK TRKPLG
Sbjct: 61 SIKKKTRKPLG 71
>gi|449444030|ref|XP_004139778.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cucumis
sativus]
gi|449444032|ref|XP_004139779.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cucumis
sativus]
gi|449502888|ref|XP_004161771.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cucumis
sativus]
Length = 88
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK +RK LG
Sbjct: 61 NVKKKSRKTLG 71
>gi|356547766|ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
gi|255627911|gb|ACU14300.1| unknown [Glycine max]
Length = 88
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
+IKK +RK LG
Sbjct: 61 NIKKKSRKTLG 71
>gi|115443949|ref|NP_001045754.1| Os02g0126700 [Oryza sativa Japonica Group]
gi|41053075|dbj|BAD08019.1| putative small nuclear ribonucleoprotein polypeptide E [Oryza
sativa Japonica Group]
gi|113535285|dbj|BAF07668.1| Os02g0126700 [Oryza sativa Japonica Group]
gi|215686543|dbj|BAG88796.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189970|gb|EEC72397.1| hypothetical protein OsI_05681 [Oryza sativa Indica Group]
gi|222622094|gb|EEE56226.1| hypothetical protein OsJ_05214 [Oryza sativa Japonica Group]
Length = 88
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLD+AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEI 60
Query: 61 HIKKNTRKPLG 71
+IKK+TRK LG
Sbjct: 61 NIKKDTRKSLG 71
>gi|226529493|ref|NP_001148430.1| small nuclear ribonucleoprotein E [Zea mays]
gi|195619228|gb|ACG31444.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/71 (91%), Positives = 70/71 (98%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEY+NLVL+DAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYINLVLEDAEEI 60
Query: 61 HIKKNTRKPLG 71
++KKNTRK LG
Sbjct: 61 NVKKNTRKSLG 71
>gi|356508935|ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
gi|356516401|ref|XP_003526883.1| PREDICTED: small nuclear ribonucleoprotein E [Glycine max]
gi|388501720|gb|AFK38926.1| unknown [Lotus japonicus]
Length = 88
Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/71 (91%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK +RK LG
Sbjct: 61 NVKKKSRKTLG 71
>gi|356562483|ref|XP_003549500.1| PREDICTED: small nuclear ribonucleoprotein E [Glycine max]
gi|255628153|gb|ACU14421.1| unknown [Glycine max]
Length = 88
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 68/71 (95%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
IKK +RK LG
Sbjct: 61 SIKKKSRKTLG 71
>gi|449457115|ref|XP_004146294.1| PREDICTED: small nuclear ribonucleoprotein E-like isoform 1
[Cucumis sativus]
Length = 88
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/71 (91%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK ++K LG
Sbjct: 61 NVKKKSKKALG 71
>gi|449457117|ref|XP_004146295.1| PREDICTED: small nuclear ribonucleoprotein E-like isoform 2
[Cucumis sativus]
Length = 86
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/71 (91%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK ++K LG
Sbjct: 61 NVKKKSKKALG 71
>gi|224117550|ref|XP_002331664.1| predicted protein [Populus trichocarpa]
gi|224143797|ref|XP_002325079.1| predicted protein [Populus trichocarpa]
gi|118483404|gb|ABK93602.1| unknown [Populus trichocarpa]
gi|222866513|gb|EEF03644.1| predicted protein [Populus trichocarpa]
gi|222874083|gb|EEF11214.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEV 60
Query: 61 HIKKNTRKPLG 71
+IKK +RK LG
Sbjct: 61 NIKKKSRKSLG 71
>gi|357455361|ref|XP_003597961.1| Small nuclear ribonucleoprotein E [Medicago truncatula]
gi|357491039|ref|XP_003615807.1| Small nuclear ribonucleoprotein E [Medicago truncatula]
gi|355487009|gb|AES68212.1| Small nuclear ribonucleoprotein E [Medicago truncatula]
gi|355517142|gb|AES98765.1| Small nuclear ribonucleoprotein E [Medicago truncatula]
gi|388498322|gb|AFK37227.1| unknown [Medicago truncatula]
Length = 88
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/71 (90%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK ++K LG
Sbjct: 61 NVKKKSKKTLG 71
>gi|195615352|gb|ACG29506.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/71 (91%), Positives = 69/71 (97%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 61 HIKKNTRKPLG 71
++KKNT K LG
Sbjct: 61 NVKKNTPKTLG 71
>gi|255563612|ref|XP_002522808.1| Small nuclear ribonucleoprotein E, putative [Ricinus communis]
gi|223538046|gb|EEF39659.1| Small nuclear ribonucleoprotein E, putative [Ricinus communis]
Length = 88
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/71 (91%), Positives = 68/71 (95%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQ WLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQFWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK +RK LG
Sbjct: 61 NVKKKSRKTLG 71
>gi|255629853|gb|ACU15277.1| unknown [Glycine max]
Length = 88
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/71 (90%), Positives = 68/71 (95%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQR+MTQPINLIFRFLQ KARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQGKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK +RK LG
Sbjct: 61 NVKKKSRKTLG 71
>gi|195653717|gb|ACG46326.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 80
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/78 (84%), Positives = 72/78 (92%), Gaps = 1/78 (1%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 61 HIKKNTRKPLGFFSKETT 78
++KKNT K L F + +T
Sbjct: 61 NVKKNTSKDL-FICESST 77
>gi|217071220|gb|ACJ83970.1| unknown [Medicago truncatula]
gi|388520551|gb|AFK48337.1| unknown [Medicago truncatula]
Length = 88
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 68/71 (95%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNL LDDAEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLALDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK ++K LG
Sbjct: 61 NVKKKSKKTLG 71
>gi|116779305|gb|ABK21228.1| unknown [Picea sitchensis]
Length = 88
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/71 (87%), Positives = 68/71 (95%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA+T+VQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 61 HIKKNTRKPLG 71
+K+ T KPLG
Sbjct: 61 SVKRKTHKPLG 71
>gi|168008828|ref|XP_001757108.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691606|gb|EDQ77967.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/69 (89%), Positives = 68/69 (98%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKD+RIEGRIIGFDEYMNLVL++AEEV +
Sbjct: 2 ATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRIIGFDEYMNLVLEEAEEVSL 61
Query: 63 KKNTRKPLG 71
KKNTRKPLG
Sbjct: 62 KKNTRKPLG 70
>gi|168027770|ref|XP_001766402.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168048491|ref|XP_001776700.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671992|gb|EDQ58536.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682311|gb|EDQ68730.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/69 (91%), Positives = 67/69 (97%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKDLRIEGRIIGFDEYMNLVLD+AEEV +
Sbjct: 2 ATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVSL 61
Query: 63 KKNTRKPLG 71
KK TRKPLG
Sbjct: 62 KKKTRKPLG 70
>gi|302765919|ref|XP_002966380.1| hypothetical protein SELMODRAFT_230895 [Selaginella
moellendorffii]
gi|302792841|ref|XP_002978186.1| hypothetical protein SELMODRAFT_176675 [Selaginella
moellendorffii]
gi|300154207|gb|EFJ20843.1| hypothetical protein SELMODRAFT_176675 [Selaginella
moellendorffii]
gi|300165800|gb|EFJ32407.1| hypothetical protein SELMODRAFT_230895 [Selaginella
moellendorffii]
Length = 88
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/71 (85%), Positives = 67/71 (94%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA++KVQRIMTQPINLIFRFLQSKA IQ+WLFEQKDLRIEGRIIGFDEYMNLVLDDA E+
Sbjct: 1 MATSKVQRIMTQPINLIFRFLQSKATIQVWLFEQKDLRIEGRIIGFDEYMNLVLDDAYEI 60
Query: 61 HIKKNTRKPLG 71
+KK +RKPLG
Sbjct: 61 SLKKKSRKPLG 71
>gi|257815604|gb|ACV70140.1| small nuclear ribonucleoprotein E [Jatropha curcas]
Length = 88
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 66/71 (92%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRI+ QPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMN VLDDAEEV
Sbjct: 1 MASTKVQRILPQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNSVLDDAEEV 60
Query: 61 HIKKNTRKPLG 71
++KK RK LG
Sbjct: 61 NVKKKPRKSLG 71
>gi|384252439|gb|EIE25915.1| small nuclear ribonucleo protein E [Coccomyxa subellipsoidea
C-169]
Length = 87
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/69 (79%), Positives = 64/69 (92%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+TKV+RIMTQPINLIFRFLQS+ ++QIWL+EQ DLRIEGRIIGFDEYMNLVLD+AEEV +
Sbjct: 2 ATKVKRIMTQPINLIFRFLQSRQKVQIWLYEQTDLRIEGRIIGFDEYMNLVLDEAEEVSM 61
Query: 63 KKNTRKPLG 71
K+ TRK LG
Sbjct: 62 KRKTRKALG 70
>gi|255087330|ref|XP_002505588.1| predicted protein [Micromonas sp. RCC299]
gi|226520858|gb|ACO66846.1| predicted protein [Micromonas sp. RCC299]
Length = 87
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 62/69 (89%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+TKVQRIMTQPINLIFRFLQ+KARIQIWL+E D +EGRIIGFDEYMNLVLDDAEEV+
Sbjct: 2 ATKVQRIMTQPINLIFRFLQTKARIQIWLYENTDTVVEGRIIGFDEYMNLVLDDAEEVNK 61
Query: 63 KKNTRKPLG 71
KK TRK +G
Sbjct: 62 KKGTRKTVG 70
>gi|159472134|ref|XP_001694206.1| small nuclear ribonucleoprotein E [Chlamydomonas reinhardtii]
gi|158276869|gb|EDP02639.1| small nuclear ribonucleoprotein E [Chlamydomonas reinhardtii]
Length = 87
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/69 (78%), Positives = 64/69 (92%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+TKVQ+IMTQPINL+FRFLQSK ++QIWLF+Q DLR+EGRIIGFDEYMNLVLD+AEEV +
Sbjct: 2 ATKVQKIMTQPINLMFRFLQSKQKVQIWLFDQADLRVEGRIIGFDEYMNLVLDEAEEVSM 61
Query: 63 KKNTRKPLG 71
K+ TRK LG
Sbjct: 62 KRKTRKTLG 70
>gi|428163538|gb|EKX32604.1| small nuclear ribonucleoprotein-like protein [Guillardia theta
CCMP2712]
Length = 91
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 61/68 (89%)
Query: 4 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIK 63
+K Q+ MTQPINLIFRFLQ+K+RIQIWL+E DLRIEG+IIGFDEYMNLVLD+AEE H K
Sbjct: 2 SKQQKTMTQPINLIFRFLQNKSRIQIWLYENADLRIEGQIIGFDEYMNLVLDNAEEYHKK 61
Query: 64 KNTRKPLG 71
K TRKPLG
Sbjct: 62 KGTRKPLG 69
>gi|221119660|ref|XP_002154306.1| PREDICTED: small nuclear ribonucleoprotein E-like [Hydra
magnipapillata]
Length = 87
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 62/69 (89%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S KVQ++M QPINLIFR+LQ++ARIQIWL+EQ +LRIEG IIGFDEYMNLVLDDA+EVH+
Sbjct: 2 SKKVQKVMVQPINLIFRYLQNRARIQIWLYEQNNLRIEGHIIGFDEYMNLVLDDAQEVHV 61
Query: 63 KKNTRKPLG 71
K T+K LG
Sbjct: 62 KNKTKKQLG 70
>gi|333656537|gb|AEF68171.1| Sm-E-like protein [Physarum polycephalum]
Length = 90
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 63/70 (90%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ+ MTQPINLIFR+LQ+K+RIQIWL+EQ D+RIEGRIIGFDEYMNLVLDDA+E+
Sbjct: 4 PPAKVQKPMTQPINLIFRYLQNKSRIQIWLYEQNDVRIEGRIIGFDEYMNLVLDDADEIF 63
Query: 62 IKKNTRKPLG 71
+KKNT+K LG
Sbjct: 64 VKKNTKKHLG 73
>gi|302845652|ref|XP_002954364.1| hypothetical protein VOLCADRAFT_64746 [Volvox carteri f.
nagariensis]
gi|300260294|gb|EFJ44514.1| hypothetical protein VOLCADRAFT_64746 [Volvox carteri f.
nagariensis]
Length = 87
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 63/69 (91%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+TKVQ+IMTQPINL+FRFLQSK ++QIWL++Q DLR+EGRIIGFDEYMNLVLD+AEEV +
Sbjct: 2 ATKVQKIMTQPINLMFRFLQSKQKVQIWLYDQADLRVEGRIIGFDEYMNLVLDEAEEVSM 61
Query: 63 KKNTRKPLG 71
K+ RK LG
Sbjct: 62 KRKNRKTLG 70
>gi|307105606|gb|EFN53854.1| hypothetical protein CHLNCDRAFT_36210 [Chlorella variabilis]
Length = 86
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 61/67 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KV+RIMTQPINLIFRFLQS+ +IQIWL+E DLRIEGRIIGFDEYMNLVLD+AEEV +K+
Sbjct: 4 KVKRIMTQPINLIFRFLQSRQKIQIWLYEHNDLRIEGRIIGFDEYMNLVLDEAEEVSVKR 63
Query: 65 NTRKPLG 71
TRK LG
Sbjct: 64 KTRKALG 70
>gi|260788526|ref|XP_002589300.1| hypothetical protein BRAFLDRAFT_268096 [Branchiostoma floridae]
gi|229274477|gb|EEN45311.1| hypothetical protein BRAFLDRAFT_268096 [Branchiostoma floridae]
Length = 90
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 61/67 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQIWL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H+K
Sbjct: 7 KVQKVMVQPINLIFRYLQNRSRIQIWLYEQTNMRIEGHIIGFDEYMNLVLDDAEEIHLKT 66
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 67 KNRKPLG 73
>gi|302845648|ref|XP_002954362.1| hypothetical protein VOLCADRAFT_82766 [Volvox carteri f.
nagariensis]
gi|300260292|gb|EFJ44512.1| hypothetical protein VOLCADRAFT_82766 [Volvox carteri f.
nagariensis]
Length = 87
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 63/69 (91%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+TK+Q+IMTQPINL+FRFLQSK ++QIWL++Q DLRIEGRIIGFDEYMNLVLD+AEEV +
Sbjct: 2 ATKIQKIMTQPINLMFRFLQSKQKVQIWLYDQADLRIEGRIIGFDEYMNLVLDEAEEVSM 61
Query: 63 KKNTRKPLG 71
K+ RK LG
Sbjct: 62 KRKNRKTLG 70
>gi|392874340|gb|AFM86002.1| Small nuclear ribonucleoprotein E [Callorhinchus milii]
gi|392875604|gb|AFM86634.1| Small nuclear ribonucleoprotein E [Callorhinchus milii]
gi|392884142|gb|AFM90903.1| Small nuclear ribonucleoprotein E [Callorhinchus milii]
Length = 92
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 62/69 (89%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+ KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H+
Sbjct: 7 AQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHM 66
Query: 63 KKNTRKPLG 71
K RKPLG
Sbjct: 67 KSKARKPLG 75
>gi|440796303|gb|ELR17412.1| small nuclear ribonucleoprotein e, putative [Acanthamoeba
castellanii str. Neff]
Length = 90
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ+IMTQPINLIFRFLQ+K+RIQI L+E DLRIEGRIIGFDEYMNLVLD+AEEV K+
Sbjct: 7 KVQKIMTQPINLIFRFLQNKSRIQIMLYENTDLRIEGRIIGFDEYMNLVLDEAEEVSTKR 66
Query: 65 NTRKPLG 71
TR PLG
Sbjct: 67 GTRTPLG 73
>gi|156378619|ref|XP_001631239.1| predicted protein [Nematostella vectensis]
gi|156218276|gb|EDO39176.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 62/67 (92%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ++++IQIWL+EQ ++RIEG IIGFDEYMNLVLD+AEEVH+K
Sbjct: 7 KVQKVMVQPINLIFRYLQNRSKIQIWLYEQVNMRIEGHIIGFDEYMNLVLDEAEEVHLKT 66
Query: 65 NTRKPLG 71
TRKPLG
Sbjct: 67 KTRKPLG 73
>gi|432859400|ref|XP_004069089.1| PREDICTED: small nuclear ribonucleoprotein E-like [Oryzias
latipes]
Length = 92
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 61/67 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEEVH+K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKT 68
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 69 KNRKPLG 75
>gi|317418569|emb|CBN80607.1| Small nuclear ribonucleoprotein E [Dicentrarchus labrax]
Length = 92
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 61/67 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEEVH+K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKT 68
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 69 KNRKPLG 75
>gi|348510586|ref|XP_003442826.1| PREDICTED: small nuclear ribonucleoprotein E-like [Oreochromis
niloticus]
Length = 92
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 61/67 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEEVH+K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKT 68
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 69 KNRKPLG 75
>gi|213514566|ref|NP_001134166.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|209731160|gb|ACI66449.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|209731914|gb|ACI66826.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|221222246|gb|ACM09784.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|223646154|gb|ACN09835.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|223646558|gb|ACN10037.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|223647280|gb|ACN10398.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|223672001|gb|ACN12182.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|223672405|gb|ACN12384.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|223673159|gb|ACN12761.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|225715976|gb|ACO13834.1| Small nuclear ribonucleoprotein E [Esox lucius]
gi|303663497|gb|ADM16108.1| Small nuclear ribonucleoprotein E [Salmo salar]
gi|303666767|gb|ADM16243.1| Small nuclear ribonucleoprotein E [Salmo salar]
Length = 92
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 61/67 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEEVH+K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKT 68
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 69 KNRKPLG 75
>gi|401398344|ref|XP_003880279.1| hypothetical protein NCLIV_007180 [Neospora caninum Liverpool]
gi|325114689|emb|CBZ50244.1| hypothetical protein NCLIV_007180 [Neospora caninum Liverpool]
Length = 91
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 63/71 (88%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M++ K+Q+IMTQPINLIFRF + R+QIWL+EQ D+RIEGRI+GFDEYMN+VLDDAEEV
Sbjct: 6 MSNKKLQKIMTQPINLIFRFFTQRMRVQIWLYEQPDMRIEGRIMGFDEYMNMVLDDAEEV 65
Query: 61 HIKKNTRKPLG 71
++KK TR P+G
Sbjct: 66 YLKKRTRIPVG 76
>gi|325181229|emb|CCA15643.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 627
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 61/69 (88%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
ST+VQ+ MTQPINL+FRFLQ+KAR+QIWL+EQ RIEGRI+GFDEYMN+VLD+AEEV +
Sbjct: 538 STRVQKPMTQPINLMFRFLQNKARVQIWLYEQTQTRIEGRIMGFDEYMNIVLDEAEEVDV 597
Query: 63 KKNTRKPLG 71
KK R PLG
Sbjct: 598 KKAKRAPLG 606
>gi|318820229|ref|NP_001187846.1| small nuclear ribonucleoprotein e [Ictalurus punctatus]
gi|308324130|gb|ADO29200.1| small nuclear ribonucleoprotein e [Ictalurus punctatus]
Length = 92
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 61/67 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEEVH+K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQINMRIEGCIIGFDEYMNLVLDDAEEVHMKT 68
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 69 KNRKPLG 75
>gi|237844609|ref|XP_002371602.1| small nuclear ribonucleoprotein E, putative [Toxoplasma gondii
ME49]
gi|211969266|gb|EEB04462.1| small nuclear ribonucleoprotein E, putative [Toxoplasma gondii
ME49]
gi|221482996|gb|EEE21320.1| small nuclear ribonucleoprotein E, putative [Toxoplasma gondii
GT1]
gi|221503930|gb|EEE29607.1| small nuclear ribonucleoprotein E, putative [Toxoplasma gondii
VEG]
Length = 91
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 63/71 (88%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M++ K+Q+IMTQPINLIFRF + R+QIWL+EQ D+RIEGRI+GFDEYMN+VLDDAEEV
Sbjct: 6 MSNKKLQKIMTQPINLIFRFFTQRMRVQIWLYEQPDMRIEGRIMGFDEYMNMVLDDAEEV 65
Query: 61 HIKKNTRKPLG 71
++KK TR P+G
Sbjct: 66 YLKKRTRIPVG 76
>gi|308322451|gb|ADO28363.1| small nuclear ribonucleoprotein e [Ictalurus furcatus]
Length = 92
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 61/67 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEEVH+K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQINMRIEGCIIGFDEYMNLVLDDAEEVHMKT 68
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 69 KNRKPLG 75
>gi|47227397|emb|CAF96946.1| unnamed protein product [Tetraodon nigroviridis]
Length = 92
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 61/67 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H+K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHMKT 68
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 69 KNRKPLG 75
>gi|322802255|gb|EFZ22651.1| hypothetical protein SINV_02639 [Solenopsis invicta]
Length = 429
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 48/67 (71%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++R+Q+WLFE +LRIEG I+GFDEYMNLVLDDAEE H K
Sbjct: 8 KVQKVMVQPINLIFRYLQNRSRVQVWLFENVNLRIEGHIVGFDEYMNLVLDDAEEYHQKT 67
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 68 KNRKPLG 74
>gi|209735714|gb|ACI68726.1| Small nuclear ribonucleoprotein E [Salmo salar]
Length = 92
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+ +RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEEVH+K
Sbjct: 9 KVQKVMVQPINLIFRYLQNHSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKT 68
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 69 KNRKPLG 75
>gi|291235504|ref|XP_002737683.1| PREDICTED: small nuclear ribonucleoprotein polypeptide E-like
[Saccoglossus kowalevskii]
Length = 92
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQS++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE H+K
Sbjct: 7 KVQKVMVQPINLIFRYLQSRSRIQVWLYEQVNMRIEGHIIGFDEYMNLVLDDAEEYHMKS 66
Query: 65 NTRKPLG 71
TRK LG
Sbjct: 67 KTRKTLG 73
>gi|387914532|gb|AFK10875.1| Small nuclear ribonucleoprotein E [Callorhinchus milii]
Length = 92
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 62/69 (89%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+ KVQ+++ QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H+
Sbjct: 7 AQKVQKVLVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHM 66
Query: 63 KKNTRKPLG 71
K RKPLG
Sbjct: 67 KSKARKPLG 75
>gi|193848588|gb|ACF22772.1| small nuclear ribonucleoprotein E [Brachypodium distachyon]
Length = 79
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 61/71 (85%), Gaps = 9/71 (12%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPI KARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1 MASTKVQRIMTQPI---------KARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 51
Query: 61 HIKKNTRKPLG 71
++KKNTRK LG
Sbjct: 52 NVKKNTRKSLG 62
>gi|336455074|ref|NP_001229595.1| small nuclear ribonucleoprotein polypeptide E-like
[Strongylocentrotus purpuratus]
Length = 99
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 60/69 (86%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
KVQ++M QPINLIFR+LQ+++R+QIWL++Q +LRIEG IIGFDEYMN+VLDDAEE H
Sbjct: 5 GQKVQKVMVQPINLIFRYLQNRSRVQIWLYDQSNLRIEGHIIGFDEYMNVVLDDAEEYHK 64
Query: 63 KKNTRKPLG 71
K TRKPLG
Sbjct: 65 KNKTRKPLG 73
>gi|125560150|gb|EAZ05598.1| hypothetical protein OsI_27814 [Oryza sativa Indica Group]
gi|125560167|gb|EAZ05615.1| hypothetical protein OsI_27832 [Oryza sativa Indica Group]
gi|222639919|gb|EEE68051.1| hypothetical protein OsJ_26051 [Oryza sativa Japonica Group]
Length = 79
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 61/71 (85%), Gaps = 9/71 (12%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MASTKVQRIMTQPI KARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE+
Sbjct: 1 MASTKVQRIMTQPI---------KARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI 51
Query: 61 HIKKNTRKPLG 71
++KK+TRK LG
Sbjct: 52 NVKKDTRKSLG 62
>gi|325181839|emb|CCA16294.1| small nuclear ribonucleoprotein homolog putative [Albugo
laibachii Nc14]
Length = 91
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 61/69 (88%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
ST+VQ+ MTQPINL+FRFLQ+KAR+QIWL+EQ RIEGRI+GFDEYMN+VLD+AEEV +
Sbjct: 2 STRVQKPMTQPINLMFRFLQNKARVQIWLYEQTQTRIEGRIMGFDEYMNIVLDEAEEVDV 61
Query: 63 KKNTRKPLG 71
KK R PLG
Sbjct: 62 KKAKRAPLG 70
>gi|156554389|ref|XP_001600882.1| PREDICTED: probable small nuclear ribonucleoprotein E-like
[Nasonia vitripennis]
Length = 94
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 59/70 (84%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINLIFR+LQ+++R+ +WLFE +LRIEG I+GFDEYMNLVLDDAEE H
Sbjct: 5 GPPKVQKVMVQPINLIFRYLQNRSRVSVWLFENINLRIEGHIVGFDEYMNLVLDDAEEYH 64
Query: 62 IKKNTRKPLG 71
+K TRKPLG
Sbjct: 65 VKSKTRKPLG 74
>gi|147904965|ref|NP_001085500.1| MGC80249 protein [Xenopus laevis]
gi|49119142|gb|AAH72854.1| MGC80249 protein [Xenopus laevis]
Length = 93
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 62/70 (88%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDD+EE+H
Sbjct: 7 GGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDSEEIH 66
Query: 62 IKKNTRKPLG 71
+K +RKP+G
Sbjct: 67 LKTKSRKPIG 76
>gi|41055945|ref|NP_957298.1| small nuclear ribonucleoprotein E [Danio rerio]
gi|54039591|sp|Q7ZUG0.1|RUXE_DANRE RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|29124607|gb|AAH49062.1| Small nuclear ribonucleoprotein polypeptide E [Danio rerio]
Length = 92
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RI +WL+EQ ++RIEG IIGFDEYMNLVLDDAEEVH+K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRISVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKT 68
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 69 KNRKPLG 75
>gi|410920641|ref|XP_003973792.1| PREDICTED: small nuclear ribonucleoprotein E-like [Takifugu
rubripes]
gi|410920643|ref|XP_003973793.1| PREDICTED: small nuclear ribonucleoprotein E-like [Takifugu
rubripes]
Length = 92
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 61/67 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDD+EE+H+K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDSEEIHMKT 68
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 69 KNRKPLG 75
>gi|328778046|ref|XP_003249437.1| PREDICTED: probable small nuclear ribonucleoprotein E-like [Apis
mellifera]
Length = 94
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 59/70 (84%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINLIFR+LQ+++R+Q+WLFE +LRIEG I+GFDEYMNLVLDDAEE H
Sbjct: 5 GPQKVQKVMVQPINLIFRYLQNRSRVQVWLFENINLRIEGHIVGFDEYMNLVLDDAEEYH 64
Query: 62 IKKNTRKPLG 71
+K RKPLG
Sbjct: 65 LKTKNRKPLG 74
>gi|380023740|ref|XP_003695670.1| PREDICTED: probable small nuclear ribonucleoprotein E-like [Apis
florea]
Length = 129
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 59/70 (84%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINLIFR+LQ+++R+Q+WLFE +LRIEG I+GFDEYMNLVLDDAEE H
Sbjct: 40 GPQKVQKVMVQPINLIFRYLQNRSRVQVWLFENINLRIEGHIVGFDEYMNLVLDDAEEYH 99
Query: 62 IKKNTRKPLG 71
+K RKPLG
Sbjct: 100 LKTKNRKPLG 109
>gi|414875727|tpg|DAA52858.1| TPA: hypothetical protein ZEAMMB73_852117, partial [Zea mays]
Length = 177
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/57 (91%), Positives = 56/57 (98%)
Query: 15 NLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
NLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEE+++KKNTRK LG
Sbjct: 104 NLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEINVKKNTRKTLG 160
>gi|198417167|ref|XP_002127833.1| PREDICTED: similar to small nuclear ribonucleoprotein E [Ciona
intestinalis]
Length = 96
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 61/69 (88%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
KVQ++M QPINLIFR+LQ+++R+ IW++EQ ++RIEG I+GFDEYMNLVLDDAEEV+I
Sbjct: 5 GQKVQKVMVQPINLIFRYLQNRSRVSIWVYEQVNMRIEGHIVGFDEYMNLVLDDAEEVNI 64
Query: 63 KKNTRKPLG 71
KKN RK LG
Sbjct: 65 KKNVRKTLG 73
>gi|52346208|ref|NP_001005147.1| small nuclear ribonucleoprotein polypeptide E [Xenopus (Silurana)
tropicalis]
gi|50603823|gb|AAH77697.1| MGC89991 protein [Xenopus (Silurana) tropicalis]
gi|89268183|emb|CAJ83657.1| small nuclear ribonucleoprotein polypeptide E [Xenopus (Silurana)
tropicalis]
gi|166796482|gb|AAI59376.1| MGC89991 protein [Xenopus (Silurana) tropicalis]
Length = 92
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 61/69 (88%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H+
Sbjct: 7 GQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHL 66
Query: 63 KKNTRKPLG 71
K +RK LG
Sbjct: 67 KTKSRKQLG 75
>gi|147903209|ref|NP_001090934.1| small nuclear ribonucleoprotein E [Sus scrofa]
gi|166233313|sp|A1XQR9.1|RUXE_PIG RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|117660533|gb|ABK55625.1| SNRPE [Sus scrofa]
gi|117660560|gb|ABK55626.1| NDUFB2 [Sus scrofa]
Length = 92
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 61/69 (88%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+ KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H
Sbjct: 7 AQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHS 66
Query: 63 KKNTRKPLG 71
K +RK LG
Sbjct: 67 KTKSRKQLG 75
>gi|301783571|ref|XP_002927201.1| PREDICTED: small nuclear ribonucleoprotein E-like [Ailuropoda
melanoleuca]
Length = 98
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 15 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 74
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 75 KSRKQLG 81
>gi|145356609|ref|XP_001422520.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582763|gb|ABP00837.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 87
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 60/69 (86%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+TKVQRIMTQPINLIFRFLQ+KAR+QIW++E D +EGRI+GFDEYMNLVLDDAEEV
Sbjct: 2 ATKVQRIMTQPINLIFRFLQTKARVQIWMYENPDTCVEGRIVGFDEYMNLVLDDAEEVTE 61
Query: 63 KKNTRKPLG 71
KK+ R +G
Sbjct: 62 KKSRRVGVG 70
>gi|426361276|ref|XP_004047844.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Gorilla gorilla gorilla]
Length = 92
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 61/69 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ +L+IEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNLQIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLGFF 73
+RK LG+
Sbjct: 69 KSRKQLGWI 77
>gi|149408455|ref|XP_001513314.1| PREDICTED: small nuclear ribonucleoprotein E-like
[Ornithorhynchus anatinus]
Length = 92
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|109484106|ref|XP_001064438.1| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
gi|293349553|ref|XP_002727191.1| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
Length = 92
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|148707696|gb|EDL39643.1| small nuclear ribonucleoprotein E, isoform CRA_a [Mus musculus]
Length = 105
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 22 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 81
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 82 KSRKQLG 88
>gi|387018116|gb|AFJ51176.1| Small nuclear ribonucleoprotein E [Crotalus adamanteus]
Length = 92
Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|4507129|ref|NP_003085.1| small nuclear ribonucleoprotein E [Homo sapiens]
gi|27883844|ref|NP_033253.1| small nuclear ribonucleoprotein E [Mus musculus]
gi|45382605|ref|NP_990581.1| small nuclear ribonucleoprotein E [Gallus gallus]
gi|134085710|ref|NP_001076928.1| small nuclear ribonucleoprotein E [Bos taurus]
gi|388490108|ref|NP_001253704.1| small nuclear ribonucleoprotein E [Macaca mulatta]
gi|403420626|ref|NP_001258166.1| small nuclear ribonucleoprotein polypeptide E [Rattus norvegicus]
gi|114572016|ref|XP_001158544.1| PREDICTED: small nuclear ribonucleoprotein E isoform 3 [Pan
troglodytes]
gi|126306697|ref|XP_001364976.1| PREDICTED: small nuclear ribonucleoprotein E-like [Monodelphis
domestica]
gi|291402573|ref|XP_002717622.1| PREDICTED: small nuclear ribonucleoprotein polypeptide E
[Oryctolagus cuniculus]
gi|297662243|ref|XP_002809621.1| PREDICTED: small nuclear ribonucleoprotein E [Pongo abelii]
gi|327271183|ref|XP_003220367.1| PREDICTED: small nuclear ribonucleoprotein E-like [Anolis
carolinensis]
gi|344277002|ref|XP_003410294.1| PREDICTED: small nuclear ribonucleoprotein E-like [Loxodonta
africana]
gi|348578175|ref|XP_003474859.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
gi|354487267|ref|XP_003505795.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cricetulus
griseus]
gi|359324001|ref|XP_003640259.1| PREDICTED: small nuclear ribonucleoprotein E-like [Canis lupus
familiaris]
gi|397479845|ref|XP_003811214.1| PREDICTED: small nuclear ribonucleoprotein E-like [Pan paniscus]
gi|397504925|ref|XP_003823029.1| PREDICTED: small nuclear ribonucleoprotein E [Pan paniscus]
gi|402857535|ref|XP_003893308.1| PREDICTED: small nuclear ribonucleoprotein E [Papio anubis]
gi|402858753|ref|XP_003893852.1| PREDICTED: small nuclear ribonucleoprotein E-like [Papio anubis]
gi|403261763|ref|XP_003923280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Saimiri
boliviensis boliviensis]
gi|403294819|ref|XP_003938362.1| PREDICTED: small nuclear ribonucleoprotein E [Saimiri boliviensis
boliviensis]
gi|410986283|ref|XP_003999440.1| PREDICTED: small nuclear ribonucleoprotein E [Felis catus]
gi|426239377|ref|XP_004013598.1| PREDICTED: small nuclear ribonucleoprotein E [Ovis aries]
gi|426333365|ref|XP_004028248.1| PREDICTED: small nuclear ribonucleoprotein E-like [Gorilla
gorilla gorilla]
gi|55977309|sp|P62305.1|RUXE_MOUSE RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|61237380|sp|P62304.1|RUXE_HUMAN RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|78102504|sp|P62303.1|RUXE_CHICK RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|190360254|sp|A4FUI2.1|RUXE_BOVIN RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|225734045|pdb|3CW1|E Chain E, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734054|pdb|3CW1|W Chain W, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734063|pdb|3CW1|X Chain X, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734072|pdb|3CW1|Y Chain Y, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|315583605|pdb|3PGW|E Chain E, Crystal Structure Of Human U1 Snrnp
gi|315583614|pdb|3PGW|H Chain H, Crystal Structure Of Human U1 Snrnp
gi|332639437|pdb|2Y9A|E Chain E, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639444|pdb|2Y9A|L Chain L, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639451|pdb|2Y9A|S Chain S, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639461|pdb|2Y9B|E Chain E, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639468|pdb|2Y9B|L Chain L, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639475|pdb|2Y9B|S Chain S, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639485|pdb|2Y9C|E Chain E, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639492|pdb|2Y9C|L Chain L, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639499|pdb|2Y9C|S Chain S, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639509|pdb|2Y9D|E Chain E, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639516|pdb|2Y9D|L Chain L, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639523|pdb|2Y9D|S Chain S, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|343781212|pdb|3S6N|E Chain E, Crystal Structure Of The Gemin2-Binding Domain Of Smn,
Gemin2 In Complex With Smd1D2FEG FROM HUMAN
gi|444302200|pdb|4F7U|E Chain E, Macromolecular Machine 6
gi|444302201|pdb|4F7U|H Chain H, Macromolecular Machine 6
gi|453055424|pdb|1VU2|C Chain C, The 8s Snrnp Assembly Intermediate
gi|453055432|pdb|1VU2|K Chain K, The 8s Snrnp Assembly Intermediate
gi|453055440|pdb|1VU2|S Chain S, The 8s Snrnp Assembly Intermediate
gi|453055448|pdb|1VU2|AA Chain a, The 8s Snrnp Assembly Intermediate
gi|453055456|pdb|1VU2|II Chain i, The 8s Snrnp Assembly Intermediate
gi|453055464|pdb|1VU2|QQ Chain q, The 8s Snrnp Assembly Intermediate
gi|453055476|pdb|1VU2|YY Chain y, The 8s Snrnp Assembly Intermediate
gi|453055480|pdb|1VU3|C Chain C, The 8s Snrnp Assembly Intermediate
gi|453055488|pdb|1VU3|K Chain K, The 8s Snrnp Assembly Intermediate
gi|453055496|pdb|1VU3|S Chain S, The 8s Snrnp Assembly Intermediate
gi|453055504|pdb|1VU3|AA Chain a, The 8s Snrnp Assembly Intermediate
gi|453055512|pdb|1VU3|II Chain i, The 8s Snrnp Assembly Intermediate
gi|453055520|pdb|1VU3|QQ Chain q, The 8s Snrnp Assembly Intermediate
gi|453056012|pdb|4F77|K Chain K, The 8s Snrnp Assembly Intermediate
gi|453056020|pdb|4F77|C Chain C, The 8s Snrnp Assembly Intermediate
gi|453056028|pdb|4F77|S Chain S, The 8s Snrnp Assembly Intermediate
gi|453056036|pdb|4F77|AA Chain a, The 8s Snrnp Assembly Intermediate
gi|453056044|pdb|4F77|II Chain i, The 8s Snrnp Assembly Intermediate
gi|453056052|pdb|4F77|QQ Chain q, The 8s Snrnp Assembly Intermediate
gi|453056064|pdb|4F77|YY Chain y, The 8s Snrnp Assembly Intermediate
gi|35105|emb|CAA31007.1| unnamed protein product [Homo sapiens]
gi|304425|gb|AAA49073.1| small nuclear ribonucleoprotein E [Gallus gallus]
gi|312002|emb|CAA46624.1| SmE protein [Gallus gallus]
gi|338267|gb|AAA90926.1| small nuclear RNA protein (snRNP E) [Homo sapiens]
gi|12803609|gb|AAH02639.1| Small nuclear ribonucleoprotein polypeptide E [Homo sapiens]
gi|12859681|dbj|BAB31734.1| unnamed protein product [Mus musculus]
gi|14198403|gb|AAH08262.1| Small nuclear ribonucleoprotein E [Mus musculus]
gi|33585911|gb|AAH55765.1| Small nuclear ribonucleoprotein E [Mus musculus]
gi|56078667|gb|AAH51207.1| Small nuclear ribonucleoprotein E [Mus musculus]
gi|60688403|gb|AAH90951.1| Small nuclear ribonucleoprotein polypeptide E [Homo sapiens]
gi|119611900|gb|EAW91494.1| small nuclear ribonucleoprotein polypeptide E, isoform CRA_a
[Homo sapiens]
gi|133777545|gb|AAI14916.1| SNRPE protein [Bos taurus]
gi|149058608|gb|EDM09765.1| rCG46024, isoform CRA_a [Rattus norvegicus]
gi|189053260|dbj|BAG35066.1| unnamed protein product [Homo sapiens]
gi|208967438|dbj|BAG73733.1| small nuclear ribonucleoprotein polypeptide E [synthetic
construct]
gi|296479386|tpg|DAA21501.1| TPA: small nuclear ribonucleoprotein E [Bos taurus]
gi|344246138|gb|EGW02242.1| Small nuclear ribonucleoprotein E [Cricetulus griseus]
gi|355558873|gb|EHH15653.1| hypothetical protein EGK_01772 [Macaca mulatta]
gi|355746009|gb|EHH50634.1| hypothetical protein EGM_01497 [Macaca fascicularis]
gi|387542988|gb|AFJ72121.1| small nuclear ribonucleoprotein E [Macaca mulatta]
gi|410355685|gb|JAA44446.1| small nuclear ribonucleoprotein polypeptide E [Pan troglodytes]
gi|417395589|gb|JAA44847.1| Putative small nuclear ribonucleoprotein e [Desmodus rotundus]
Length = 92
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|443693014|gb|ELT94478.1| hypothetical protein CAPTEDRAFT_158302 [Capitella teleta]
gi|443707581|gb|ELU03095.1| hypothetical protein CAPTEDRAFT_101766 [Capitella teleta]
Length = 92
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 61/70 (87%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
A KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLD+AEEV+
Sbjct: 5 AGGKVQKVMVQPINLIFRYLQNRSRIQVWLYEQCNMRIEGCIIGFDEYMNLVLDEAEEVN 64
Query: 62 IKKNTRKPLG 71
IK RK LG
Sbjct: 65 IKTKNRKNLG 74
>gi|395734016|ref|XP_003776336.1| PREDICTED: small nuclear ribonucleoprotein E-like [Pongo abelii]
Length = 92
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG I+GFDEYMNLVLDDAEEVH K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIVGFDEYMNLVLDDAEEVHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|395838983|ref|XP_003792383.1| PREDICTED: small nuclear ribonucleoprotein E [Otolemur garnettii]
Length = 90
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|281354337|gb|EFB29921.1| hypothetical protein PANDA_016960 [Ailuropoda melanoleuca]
Length = 92
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|148226114|ref|NP_001085570.1| small nuclear ribonucleoprotein polypeptide E [Xenopus laevis]
gi|49256559|gb|AAH72956.1| MGC82471 protein [Xenopus laevis]
Length = 92
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 61/69 (88%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
KVQ++M QPINLIFR+LQ+++R+Q+WL+EQ ++RIEG IIGFDEYMN+VLDDAEE+H+
Sbjct: 7 GQKVQKVMVQPINLIFRYLQNRSRVQVWLYEQVNMRIEGCIIGFDEYMNIVLDDAEEIHL 66
Query: 63 KKNTRKPLG 71
K +RK LG
Sbjct: 67 KTKSRKQLG 75
>gi|357631258|gb|EHJ78848.1| hypothetical protein KGM_10301 [Danaus plexippus]
Length = 463
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 59/67 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++R+QIWL+E +LRIEG I+GFDEYMN+VLD+AEEVH+K
Sbjct: 8 KVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKT 67
Query: 65 NTRKPLG 71
RK +G
Sbjct: 68 KNRKQIG 74
>gi|340720323|ref|XP_003398590.1| PREDICTED: probable small nuclear ribonucleoprotein E-like
[Bombus terrestris]
gi|350408777|ref|XP_003488510.1| PREDICTED: probable small nuclear ribonucleoprotein E-like
[Bombus impatiens]
Length = 94
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 59/70 (84%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINLIFR+LQ+++R+Q+WLFE +LRIEG I+GFDEYMNLVLDDAEE +
Sbjct: 5 GPQKVQKVMVQPINLIFRYLQNRSRVQVWLFENINLRIEGHIVGFDEYMNLVLDDAEEYN 64
Query: 62 IKKNTRKPLG 71
+K RKPLG
Sbjct: 65 LKTKARKPLG 74
>gi|391347407|ref|XP_003747954.1| PREDICTED: probable small nuclear ribonucleoprotein E-like
[Metaseiulus occidentalis]
Length = 90
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 60/70 (85%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
+TKVQ++M QPINLIFR+LQ++A+IQ+WL+E LRIEG IIGFDEYMNLVLD+AEEV+
Sbjct: 4 GNTKVQKVMVQPINLIFRYLQNRAKIQVWLYENTSLRIEGYIIGFDEYMNLVLDEAEEVY 63
Query: 62 IKKNTRKPLG 71
+K RK +G
Sbjct: 64 VKTGHRKTIG 73
>gi|405971206|gb|EKC36056.1| Small nuclear ribonucleoprotein E [Crassostrea gigas]
Length = 90
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 59/70 (84%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINLIFR+LQ+++RI +WL+EQ +LRIEG I+GFDEYMNLVLD+AEEVH
Sbjct: 5 GGQKVQKVMVQPINLIFRYLQNRSRISVWLYEQTNLRIEGCIVGFDEYMNLVLDEAEEVH 64
Query: 62 IKKNTRKPLG 71
+K RK LG
Sbjct: 65 MKTKNRKTLG 74
>gi|55632867|ref|XP_520443.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Pan troglodytes]
Length = 92
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ +++IEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMQIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|348569444|ref|XP_003470508.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
Length = 92
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+ KVQ++M QPINLIFR+LQ+ +RIQ+WL+EQ ++ IEG IIGFDEYMNLVLDDAEE+H
Sbjct: 7 TQKVQKVMVQPINLIFRYLQNSSRIQVWLYEQVNMHIEGCIIGFDEYMNLVLDDAEEIHS 66
Query: 63 KKNTRKPLGFF 73
K +RK LG+
Sbjct: 67 KTKSRKQLGWI 77
>gi|332222659|ref|XP_003260491.1| PREDICTED: small nuclear ribonucleoprotein E-like [Nomascus
leucogenys]
Length = 92
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ+IM QPINLIFR+LQS++RIQ+WL+EQ +++IEG IIGFDEYMNLVLD+AEE+H K
Sbjct: 9 KVQKIMVQPINLIFRYLQSRSRIQVWLYEQVNMQIEGCIIGFDEYMNLVLDEAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|294952865|ref|XP_002787488.1| Small nuclear ribonucleoprotein E, putative [Perkinsus marinus
ATCC 50983]
gi|239902490|gb|EER19284.1| Small nuclear ribonucleoprotein E, putative [Perkinsus marinus
ATCC 50983]
Length = 93
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+ K+Q+IMT PINLIFR+L K RI +WL++ KDLR+EG I+GFDEYMN+VLDDAEEV
Sbjct: 2 MSKRKLQKIMTMPINLIFRYLTEKTRIVVWLYDHKDLRMEGVILGFDEYMNVVLDDAEEV 61
Query: 61 HIKKNTRKPLG 71
+ KK+TR+P+G
Sbjct: 62 NTKKDTRRPVG 72
>gi|307213117|gb|EFN88639.1| Probable small nuclear ribonucleoprotein E [Harpegnathos saltator]
Length = 295
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/67 (70%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++R+Q+WLFE +LRIEG I+GFDEYMNLVLDDAEE + K
Sbjct: 209 KVQKVMVQPINLIFRYLQNRSRVQVWLFENVNLRIEGHIVGFDEYMNLVLDDAEEYYQKT 268
Query: 65 NTRKPLG 71
RKPLG
Sbjct: 269 KVRKPLG 275
>gi|109514130|ref|XP_001065908.1| PREDICTED: small nuclear ribonucleoprotein E [Rattus norvegicus]
Length = 92
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RI+G IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNIRIKGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|119589572|gb|EAW69166.1| hCG23490, isoform CRA_a [Homo sapiens]
Length = 92
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPI+LIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPISLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|348572632|ref|XP_003472096.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
Length = 92
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ++++IQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSQIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|389612857|dbj|BAM19829.1| small ribonucleoprotein particle protein SmE [Papilio xuthus]
Length = 95
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 59/70 (84%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINLIFR+LQ+++R+QIWL+E +LRIEG I+GFDEYMN+VLDDAEEVH
Sbjct: 5 GPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDDAEEVH 64
Query: 62 IKKNTRKPLG 71
+K RK +G
Sbjct: 65 MKTKNRKQIG 74
>gi|297459953|ref|XP_002700818.1| PREDICTED: uncharacterized protein LOC100296197 [Bos taurus]
Length = 182
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ +++IEG IIGFDEYMNL+LDDAEE+H K
Sbjct: 99 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMQIEGCIIGFDEYMNLILDDAEEIHSKT 158
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 159 KSRKQLG 165
>gi|383413025|gb|AFH29726.1| small nuclear ribonucleoprotein E [Macaca mulatta]
Length = 92
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ+++ QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVVVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|293356012|ref|XP_002728814.1| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
gi|392337758|ref|XP_003753347.1| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
Length = 92
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ +++IEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMQIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|359691083|emb|CBH32487.1| small nuclear ribonucleoprotein polypeptide E [Oreochromis
mossambicus]
Length = 92
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 59/69 (85%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++ IEG IIGFDEYMNLVLDDAEEV +
Sbjct: 7 GQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMGIEGCIIGFDEYMNLVLDDAEEVPM 66
Query: 63 KKNTRKPLG 71
K RKPLG
Sbjct: 67 KTKNRKPLG 75
>gi|294956367|ref|XP_002788910.1| small nuclear ribonucleoprotein, putative [Perkinsus marinus ATCC
50983]
gi|239904570|gb|EER20706.1| small nuclear ribonucleoprotein, putative [Perkinsus marinus ATCC
50983]
Length = 94
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+ K+Q+IMT PINLIFR+L K RI +WL++ KDLR+EG I+GFDEYMN+VLDDAEEV
Sbjct: 2 MSKRKLQKIMTMPINLIFRYLTEKTRIVVWLYDHKDLRMEGVILGFDEYMNVVLDDAEEV 61
Query: 61 HIKKNTRKPLG 71
+ KK+TR+P+G
Sbjct: 62 NTKKDTRRPVG 72
>gi|116780366|gb|ABK21652.1| unknown [Picea sitchensis]
Length = 79
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 59/71 (83%), Gaps = 9/71 (12%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA+T+VQRIMTQPI KARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1 MATTRVQRIMTQPI---------KARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 51
Query: 61 HIKKNTRKPLG 71
+K+ T KPLG
Sbjct: 52 SVKRKTHKPLG 62
>gi|157128750|ref|XP_001661504.1| SM protein G, putative [Aedes aegypti]
gi|108872482|gb|EAT36707.1| AAEL011233-PA [Aedes aegypti]
Length = 91
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 59/69 (85%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+KVQ++M QPINLIFR+LQ+++R+Q+WL+E LRIEG I+GFDEYMNLVLD+AEE +
Sbjct: 5 GSKVQKVMVQPINLIFRYLQNRSRVQVWLYENTHLRIEGHIVGFDEYMNLVLDEAEEYNT 64
Query: 63 KKNTRKPLG 71
KK R+PLG
Sbjct: 65 KKQNRRPLG 73
>gi|390176608|ref|XP_003736146.1| GA15004 [Drosophila pseudoobscura pseudoobscura]
gi|388858695|gb|EIM52219.1| GA15004 [Drosophila pseudoobscura pseudoobscura]
Length = 94
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 60/70 (85%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
++ KVQ++M QPINLIFR+LQ+++R+Q+WL+E LRIEG I+GFDEYMNLVLDDAEEV+
Sbjct: 5 SNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEVY 64
Query: 62 IKKNTRKPLG 71
+K RK LG
Sbjct: 65 VKTRQRKSLG 74
>gi|440911215|gb|ELR60916.1| Small nuclear ribonucleoprotein E, partial [Bos grunniens mutus]
Length = 91
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ +++IEG IIGFDEYMNL+LDDAEE+H K
Sbjct: 8 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMQIEGCIIGFDEYMNLILDDAEEIHSKT 67
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 68 KSRKQLG 74
>gi|301765636|ref|XP_002918237.1| PREDICTED: small nuclear ribonucleoprotein E-like [Ailuropoda
melanoleuca]
Length = 92
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 59/67 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++R EG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRKEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|118781504|ref|XP_311506.3| AGAP010440-PA [Anopheles gambiae str. PEST]
gi|116129981|gb|EAA07131.3| AGAP010440-PA [Anopheles gambiae str. PEST]
Length = 90
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 60/69 (86%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+KVQ++M QPINLIFR+LQ+++R+Q+WL+E LRIEG I+GFDEYMNLVLD+AEE +I
Sbjct: 5 GSKVQKVMVQPINLIFRYLQNRSRVQVWLYENTHLRIEGHIVGFDEYMNLVLDEAEEFNI 64
Query: 63 KKNTRKPLG 71
KK TR+ LG
Sbjct: 65 KKQTRRQLG 73
>gi|74747670|sp|Q5VYJ4.1|RUEL1_HUMAN RecName: Full=Putative small nuclear ribonucleoprotein
polypeptide E-like protein 1
Length = 92
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 60/67 (89%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ++++IQ+WL+EQ +++IEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSQIQVWLYEQVNMQIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|328768113|gb|EGF78160.1| hypothetical protein BATDEDRAFT_90820 [Batrachochytrium
dendrobatidis JAM81]
Length = 91
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 59/69 (85%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+TK+Q+IM QPINLIFR LQ K+R+QIWL+EQ ++RIEG+I+GFDE+MNLVLDDAEEV
Sbjct: 2 ATKLQKIMVQPINLIFRMLQQKSRVQIWLYEQTEIRIEGQILGFDEFMNLVLDDAEEVST 61
Query: 63 KKNTRKPLG 71
K RK LG
Sbjct: 62 KTGARKQLG 70
>gi|296230202|ref|XP_002760604.1| PREDICTED: small nuclear ribonucleoprotein E-like [Callithrix
jacchus]
Length = 92
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 59/67 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++ IQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSWIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|355721057|gb|AES07138.1| small nuclear ribonucleoprotein polypeptide E [Mustela putorius
furo]
Length = 82
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 58/66 (87%)
Query: 6 VQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKN 65
VQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 1 VQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTK 60
Query: 66 TRKPLG 71
RK LG
Sbjct: 61 LRKQLG 66
>gi|303288826|ref|XP_003063701.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454769|gb|EEH52074.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 90
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/57 (85%), Positives = 54/57 (94%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
+TKVQRIMTQPINLIFRFLQ+KARIQIWL+E D+ +EGRIIGFDEYMNLVLDDAEE
Sbjct: 2 ATKVQRIMTQPINLIFRFLQTKARIQIWLYENTDVVVEGRIIGFDEYMNLVLDDAEE 58
>gi|348586080|ref|XP_003478798.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
Length = 92
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 59/67 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ++++IQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE H +
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSQIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEETHSRT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|170065245|ref|XP_001867860.1| small nuclear ribonucleoprotein E [Culex quinquefasciatus]
gi|167882312|gb|EDS45695.1| small nuclear ribonucleoprotein E [Culex quinquefasciatus]
Length = 91
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 59/69 (85%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+KVQ++M QPINLIFR+LQ+++R+Q+WL+E LRIEG I+GFDEYMNLVLD+AEE +I
Sbjct: 5 GSKVQKVMVQPINLIFRYLQNRSRVQVWLYENTHLRIEGHIVGFDEYMNLVLDEAEEYNI 64
Query: 63 KKNTRKPLG 71
KK R+ LG
Sbjct: 65 KKQNRRTLG 73
>gi|332376438|gb|AEE63359.1| unknown [Dendroctonus ponderosae]
Length = 97
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 59/67 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++R+Q+WL+E LRIEG I+GFDEYMNLVLDDAEE+++K
Sbjct: 7 KVQKVMVQPINLIFRYLQNRSRVQVWLYENVRLRIEGHIVGFDEYMNLVLDDAEELYVKT 66
Query: 65 NTRKPLG 71
R+PLG
Sbjct: 67 MHRRPLG 73
>gi|342905932|gb|AEL79249.1| small nuclear ribonucleoprotein E [Rhodnius prolixus]
gi|342905938|gb|AEL79252.1| small nuclear ribonucleoprotein E [Rhodnius prolixus]
Length = 97
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 58/70 (82%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINLIFR+LQ+++R+ +WL+E +LRIEG I+GFDEYMNLVLDDAEE +
Sbjct: 5 GPQKVQKVMVQPINLIFRYLQNRSRVCVWLYENINLRIEGHIVGFDEYMNLVLDDAEEYN 64
Query: 62 IKKNTRKPLG 71
IK R+PLG
Sbjct: 65 IKTKNRRPLG 74
>gi|297480322|ref|XP_002707759.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100296197 [Bos taurus]
gi|296482627|tpg|DAA24742.1| TPA: small nuclear ribonucleoprotein polypeptide E-like [Bos
taurus]
Length = 182
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 59/67 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M PINLIFR+LQ+++RIQ+WL+EQ +++IEG IIGFDEYMNL+LDDAEE+H K
Sbjct: 99 KVQKVMVXPINLIFRYLQNRSRIQVWLYEQVNMQIEGCIIGFDEYMNLILDDAEEIHSKT 158
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 159 KSRKQLG 165
>gi|196001475|ref|XP_002110605.1| hypothetical protein TRIADDRAFT_22667 [Trichoplax adhaerens]
gi|190586556|gb|EDV26609.1| hypothetical protein TRIADDRAFT_22667 [Trichoplax adhaerens]
Length = 88
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+V+++M QPIN+IFRFLQ+K R+QIWL+EQ + RIEG I+GFDEYMNLVLDDA EV IK
Sbjct: 6 RVKKVMIQPINVIFRFLQNKTRVQIWLYEQTNTRIEGYILGFDEYMNLVLDDAAEVSIKN 65
Query: 65 NTRKPLG 71
N R+P+G
Sbjct: 66 NQRRPIG 72
>gi|296216208|ref|XP_002754465.1| PREDICTED: small nuclear ribonucleoprotein E-like [Callithrix
jacchus]
gi|296238888|ref|XP_002764351.1| PREDICTED: small nuclear ribonucleoprotein E-like [Callithrix
jacchus]
Length = 92
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 59/67 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ +++IEG IIGFDEYMNLVLD AEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMQIEGCIIGFDEYMNLVLDAAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|351707608|gb|EHB10527.1| Small nuclear ribonucleoprotein E [Heterocephalus glaber]
Length = 92
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+ +IQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNVRKIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|348553541|ref|XP_003462585.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
Length = 93
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 59/67 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ++++IQ+WL+EQ ++R EG IIGFDEYMNL+LDDAEE+H K
Sbjct: 10 KVQKVMVQPINLIFRYLQNRSQIQVWLYEQVNMRTEGCIIGFDEYMNLILDDAEEIHSKT 69
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 70 KSRKQLG 76
>gi|426257308|ref|XP_004022271.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Ovis aries]
Length = 92
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 60/69 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+K++IQ+WL+EQ ++ IEG IIGFDEY+NLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNKSQIQVWLYEQVNIWIEGCIIGFDEYVNLVLDDAEEIHSKT 68
Query: 65 NTRKPLGFF 73
+RK LG+
Sbjct: 69 KSRKQLGWI 77
>gi|397505808|ref|XP_003823438.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Pan paniscus]
Length = 92
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 59/67 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+E +++IEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEPVNMQIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|24582631|ref|NP_609162.1| small ribonucleoprotein particle protein SmE [Drosophila
melanogaster]
gi|29428063|sp|Q9VLV5.1|RUXE_DROME RecName: Full=Probable small nuclear ribonucleoprotein E;
Short=snRNP-E; AltName: Full=Sm protein E; Short=Sm-E;
Short=SmE
gi|7297315|gb|AAF52576.1| small ribonucleoprotein particle protein SmE [Drosophila
melanogaster]
gi|28317182|gb|AAO39600.1| GM19936p [Drosophila melanogaster]
gi|220947662|gb|ACL86374.1| CG18591-PA [synthetic construct]
gi|220956962|gb|ACL91024.1| CG18591-PA [synthetic construct]
Length = 94
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 59/70 (84%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
+ KVQ++M QPINLIFR+LQ+++R+Q+WL+E LRIEG I+GFDEYMNLVLDDAEEV+
Sbjct: 5 GNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEVY 64
Query: 62 IKKNTRKPLG 71
+K R+ LG
Sbjct: 65 VKTRQRRNLG 74
>gi|346471229|gb|AEO35459.1| hypothetical protein [Amblyomma maculatum]
Length = 94
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 57/67 (85%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ++ARIQ+WL+E LRIEG IIGFDEYMNLVLDDAEE++ K
Sbjct: 10 KVQKVMVQPINLIFRYLQNRARIQVWLYENVALRIEGHIIGFDEYMNLVLDDAEEIYTKT 69
Query: 65 NTRKPLG 71
RK +G
Sbjct: 70 KQRKQVG 76
>gi|348563323|ref|XP_003467457.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
Length = 92
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+L++ +RIQ+WL+EQ ++RIEG I+GFDEYMNLVLDD EE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLENTSRIQVWLYEQVNMRIEGCIVGFDEYMNLVLDDEEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|354468865|ref|XP_003496871.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cricetulus
griseus]
gi|344247265|gb|EGW03369.1| Small nuclear ribonucleoprotein E [Cricetulus griseus]
Length = 92
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++ IEG IIG DEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMWIEGCIIGLDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|440908733|gb|ELR58720.1| hypothetical protein M91_20943, partial [Bos grunniens mutus]
Length = 91
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++ IQ+WL+EQ ++RIEG IIGFDEY NLVLDDAEE+H K
Sbjct: 8 KVQKVMVQPINLIFRYLQNRSHIQVWLYEQVNMRIEGCIIGFDEYRNLVLDDAEEIHSKT 67
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 68 KSRKQLG 74
>gi|427786001|gb|JAA58452.1| Putative small ribonucleoprotein particle protein sme
[Rhipicephalus pulchellus]
Length = 94
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 57/69 (82%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
KVQ++M QPINLIFR+LQ++ARIQ+WL+E LRIEG IIGFDEYMNLVLDDAEE++
Sbjct: 8 GQKVQKVMVQPINLIFRYLQNRARIQVWLYENVHLRIEGHIIGFDEYMNLVLDDAEEIYT 67
Query: 63 KKNTRKPLG 71
K RK +G
Sbjct: 68 KPKHRKQVG 76
>gi|312005|emb|CAA46626.1| small nuclear ribonucleoprotein E [Mus musculus]
gi|338269|gb|AAA36621.1| small nuclear ribonucleoprotein E, partial [Homo sapiens]
Length = 81
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 57/64 (89%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +R
Sbjct: 1 KVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSR 60
Query: 68 KPLG 71
K LG
Sbjct: 61 KQLG 64
>gi|297469885|ref|XP_002707307.1| PREDICTED: small nuclear ribonucleoprotein E [Bos taurus]
gi|297492936|ref|XP_002699974.1| PREDICTED: small nuclear ribonucleoprotein E [Bos taurus]
gi|296470897|tpg|DAA13012.1| TPA: small nuclear ribonucleoprotein polypeptide E-like [Bos
taurus]
Length = 164
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++ IQ+WL+EQ ++RIEG IIGFDEY NLVLDDAEE+H K
Sbjct: 81 KVQKVMVQPINLIFRYLQNRSHIQVWLYEQVNMRIEGCIIGFDEYRNLVLDDAEEIHSKT 140
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 141 KSRKQLG 147
>gi|428671949|gb|EKX72864.1| small nuclear ribonucleoprotein, putative [Babesia equi]
Length = 89
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
K+Q+IMTQPIN IFRF S R+QIWL++Q + RIEGRI+GFDEYMN+VLDDAEEV +KK
Sbjct: 7 KLQKIMTQPINQIFRFFTSGTRVQIWLYDQPNTRIEGRIMGFDEYMNMVLDDAEEVTLKK 66
Query: 65 NTRKPLG 71
+TRK +G
Sbjct: 67 DTRKDIG 73
>gi|241838714|ref|XP_002415212.1| small nuclear ribonucleoprotein E, putative [Ixodes scapularis]
gi|215509424|gb|EEC18877.1| small nuclear ribonucleoprotein E, putative [Ixodes scapularis]
Length = 94
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 57/67 (85%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ++ARIQ+WL+E LRIEG IIGFDEYMNLVLDDAEE++ K
Sbjct: 10 KVQKVMVQPINLIFRYLQNRARIQVWLYENVILRIEGHIIGFDEYMNLVLDDAEEIYTKT 69
Query: 65 NTRKPLG 71
RK +G
Sbjct: 70 KQRKQVG 76
>gi|296476433|tpg|DAA18548.1| TPA: small nuclear ribonucleoprotein polypeptide E-like [Bos
taurus]
Length = 92
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RI++WL+EQ ++R EG IIGFDE MNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIRVWLYEQVNMRTEGSIIGFDECMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|225713140|gb|ACO12416.1| Small nuclear ribonucleoprotein E [Lepeophtheirus salmonis]
gi|290462431|gb|ADD24263.1| Small nuclear ribonucleoprotein E [Lepeophtheirus salmonis]
Length = 104
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 57/70 (81%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
A+ KVQ++M QPINLIFR+LQ++ R+ +WL+E + RIEG I+GFDEYMNLVL DA EVH
Sbjct: 6 ANQKVQKVMVQPINLIFRYLQNRTRVSVWLYENVNTRIEGHIVGFDEYMNLVLADAAEVH 65
Query: 62 IKKNTRKPLG 71
+K+ T K +G
Sbjct: 66 VKRGTTKNVG 75
>gi|320168707|gb|EFW45606.1| hypothetical protein CAOG_03590 [Capsaspora owczarzaki ATCC
30864]
Length = 87
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 58/69 (84%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S +VQ++M PINLIF++LQ+K R+QIWL+EQ +R+EG I+GFDEYMNLVLDDAEE++
Sbjct: 2 SGRVQKVMVLPINLIFKYLQTKTRVQIWLYEQASMRVEGVIVGFDEYMNLVLDDAEELNA 61
Query: 63 KKNTRKPLG 71
K TRK +G
Sbjct: 62 KSQTRKNVG 70
>gi|321471723|gb|EFX82695.1| hypothetical protein DAPPUDRAFT_195506 [Daphnia pulex]
Length = 94
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 59/69 (85%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+ KVQ++M QPINLIFR+LQ+++R+ IWL+E ++ +EG I+GFDEYMN+VLDDAEEV++
Sbjct: 5 APKVQKVMVQPINLIFRYLQTRSRVDIWLYENINMHMEGHIVGFDEYMNIVLDDAEEVYV 64
Query: 63 KKNTRKPLG 71
K N RK +G
Sbjct: 65 KTNVRKQIG 73
>gi|114051397|ref|NP_001040370.1| small nuclear ribonucleoprotein E [Bombyx mori]
gi|95102658|gb|ABF51267.1| small nuclear ribonucleoprotein E [Bombyx mori]
Length = 95
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 58/70 (82%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINLIFR+LQ+++R+QI L+E +LRIEG I+GFDEYMN+VLD+AEEVH
Sbjct: 5 GPPKVQKVMVQPINLIFRYLQNRSRVQIGLYENVNLRIEGHIVGFDEYMNMVLDEAEEVH 64
Query: 62 IKKNTRKPLG 71
+K RK +G
Sbjct: 65 MKSKNRKQIG 74
>gi|346468665|gb|AEO34177.1| hypothetical protein [Amblyomma maculatum]
Length = 99
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 55/64 (85%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ++ARIQ+WL+E LRIEG IIGFDEYMNLVLDDAEE++ K
Sbjct: 10 KVQKVMVQPINLIFRYLQNRARIQVWLYENVALRIEGHIIGFDEYMNLVLDDAEEIYTKS 69
Query: 65 NTRK 68
RK
Sbjct: 70 KQRK 73
>gi|339522121|gb|AEJ84225.1| small nuclear ribonucleoprotein E [Capra hircus]
Length = 79
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 55/62 (88%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKP 69
M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK
Sbjct: 1 MVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQ 60
Query: 70 LG 71
LG
Sbjct: 61 LG 62
>gi|389584836|dbj|GAB67567.1| small nuclear ribonucleoprotein E [Plasmodium cynomolgi strain B]
Length = 94
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
Query: 1 MAST--KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAE 58
MA+T K+Q+IMTQPIN IFRF +K +QIWL+++ D RIEG+I+GFDEYMN+VLD++
Sbjct: 1 MAATNKKLQKIMTQPINQIFRFFTNKTVVQIWLYDKPDTRIEGKILGFDEYMNMVLDESA 60
Query: 59 EVHIKKNTRKPLG 71
EV +KKNTRK LG
Sbjct: 61 EVSVKKNTRKDLG 73
>gi|392339645|ref|XP_003753865.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Rattus norvegicus]
Length = 169
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 56/69 (81%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQS +RIQ+WL EQ D +IEG IIGFDEYMNLV DDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQSGSRIQVWLCEQVDAQIEGCIIGFDEYMNLVSDDAEEIHSKT 68
Query: 65 NTRKPLGFF 73
+R+ G+
Sbjct: 69 KSREQPGWI 77
>gi|242008943|ref|XP_002425253.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212509009|gb|EEB12515.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 96
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 56/70 (80%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINLIFR+LQ+++R+Q+W++E RIEG I+GFDEYMNLVLDDAEE +
Sbjct: 5 GPAKVQKVMVQPINLIFRYLQNRSRVQVWIYENITTRIEGHIVGFDEYMNLVLDDAEEFN 64
Query: 62 IKKNTRKPLG 71
IK RK LG
Sbjct: 65 IKTKNRKELG 74
>gi|156096492|ref|XP_001614280.1| small nuclear ribonucleoprotein E [Plasmodium vivax Sal-1]
gi|148803154|gb|EDL44553.1| small nuclear ribonucleoprotein E, putative [Plasmodium vivax]
Length = 94
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
Query: 1 MAST--KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAE 58
MA+T K+Q+IMTQPIN IFRF +K +QIWL+++ D RIEG+I+GFDEYMN+VLD++
Sbjct: 1 MAATNKKLQKIMTQPINQIFRFFTNKTVVQIWLYDKPDTRIEGKILGFDEYMNMVLDESA 60
Query: 59 EVHIKKNTRKPLG 71
EV +KKNTRK LG
Sbjct: 61 EVSLKKNTRKDLG 73
>gi|441598236|ref|XP_004087442.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Nomascus leucogenys]
Length = 92
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 59/67 (88%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+VQR+M QPINLIFR+L++++ IQ+WL+EQ +++IEG IIGFD+YMNLVLDDAEE+H K
Sbjct: 9 RVQRVMVQPINLIFRYLENRSWIQVWLYEQVNMQIEGCIIGFDKYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|392346855|ref|XP_003749650.1| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
Length = 92
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 56/69 (81%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQS +RIQ+WL EQ D +IEG IIGFDEYMNLV DDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQSGSRIQVWLCEQVDAQIEGCIIGFDEYMNLVSDDAEEIHSKT 68
Query: 65 NTRKPLGFF 73
+R+ G+
Sbjct: 69 KSREQPGWI 77
>gi|45478130|gb|AAS66236.1| LRRGT00145 [Rattus norvegicus]
Length = 428
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQS +RIQ+WL EQ D +IEG IIGFDEYMNLV DDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQSGSRIQVWLCEQVDAQIEGCIIGFDEYMNLVSDDAEEIHSKT 68
Query: 65 NTRKPLGF 72
N PL F
Sbjct: 69 N--GPLKF 74
>gi|426386751|ref|XP_004059844.1| PREDICTED: small nuclear ribonucleoprotein E-like [Gorilla
gorilla gorilla]
Length = 92
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M Q INLIFR+LQ+++R+Q+ L+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMAQLINLIFRYLQNRSRVQVRLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|221058403|ref|XP_002259847.1| small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|193809920|emb|CAQ41114.1| small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
Length = 96
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 1 MAST--KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAE 58
MA T K+Q+IMTQPIN IFRF +K +QIWL+++ D RIEG+I+GFDEYMN+VLD++
Sbjct: 1 MAVTNKKLQKIMTQPINQIFRFFTNKTMVQIWLYDKPDTRIEGKILGFDEYMNMVLDESA 60
Query: 59 EVHIKKNTRKPLG 71
EV +KKNTRK LG
Sbjct: 61 EVSVKKNTRKDLG 73
>gi|299470361|emb|CBN78410.1| Small nuclear ribonucleoprotein-associated protein E [Ectocarpus
siliculosus]
Length = 97
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 58/66 (87%)
Query: 6 VQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKN 65
V+++MTQPI+LIFRFLQ++ R+QIWL+E +RIEG+I+GFDEYMNLVLD+AEEV +K +
Sbjct: 15 VKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKND 74
Query: 66 TRKPLG 71
RK LG
Sbjct: 75 ERKQLG 80
>gi|340379367|ref|XP_003388198.1| PREDICTED: small nuclear ribonucleoprotein E-like [Amphimedon
queenslandica]
Length = 93
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 60/69 (86%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+ KVQ++M QPINLIFR+LQ+K+R+Q+WL+ ++++RIEG I GFDE+MNLV+ DAEEV++
Sbjct: 5 AQKVQKVMVQPINLIFRYLQNKSRVQVWLYGRQNMRIEGVITGFDEFMNLVMSDAEEVYL 64
Query: 63 KKNTRKPLG 71
K TRK +G
Sbjct: 65 KTETRKRIG 73
>gi|225717902|gb|ACO14797.1| Probable small nuclear ribonucleoprotein E [Caligus clemensi]
Length = 94
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 56/70 (80%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
+ KVQ++M QPINLIFR+LQ++ R+ +WL+E + +IEG I+GFDEYMNLVL DA EVH
Sbjct: 6 GNQKVQKVMVQPINLIFRYLQNRTRVSVWLYENVNTKIEGHIVGFDEYMNLVLADAAEVH 65
Query: 62 IKKNTRKPLG 71
+KK T K +G
Sbjct: 66 LKKGTTKNVG 75
>gi|417395580|gb|JAA44844.1| Putative small nuclear ribonucleoprotein e [Desmodus rotundus]
Length = 92
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 57/67 (85%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+VQ++M QPINLI R+LQ +++IQ+WL+EQ ++ IEG ++GFDEYMNLVLDDAEE+H K
Sbjct: 9 RVQKVMVQPINLIVRYLQDRSQIQLWLYEQVNVWIEGYVVGFDEYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|440889654|gb|ELR44674.1| hypothetical protein M91_20945 [Bos grunniens mutus]
Length = 92
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++RI++ L+EQ ++R EG IIGFDE MNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIRVRLYEQVNMRTEGSIIGFDECMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|170579069|ref|XP_001894662.1| small nuclear ribonucleoprotein E [Brugia malayi]
gi|158598633|gb|EDP36493.1| small nuclear ribonucleoprotein E, putative [Brugia malayi]
gi|402592161|gb|EJW86090.1| small nuclear ribonucleoprotein E [Wuchereria bancrofti]
Length = 89
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 57/69 (82%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S KVQ++M QPINLIFR+LQ+++RIQIWL+E RIEG IIGFDEYMN+VLD+AEEV++
Sbjct: 5 SGKVQKVMVQPINLIFRYLQNRSRIQIWLYEDITHRIEGYIIGFDEYMNVVLDEAEEVNM 64
Query: 63 KKNTRKPLG 71
K R +G
Sbjct: 65 KTKNRNKVG 73
>gi|254281298|ref|NP_001156839.1| small nuclear ribonucleoprotein E [Acyrthosiphon pisum]
Length = 93
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 58/67 (86%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR LQ++A++Q+WL E+ LRIEG I+GFDEYMNLVLD+A EV+ K
Sbjct: 7 KVQKVMVQPINLIFRHLQNRAKVQVWLQEKIHLRIEGHIVGFDEYMNLVLDEACEVNTKV 66
Query: 65 NTRKPLG 71
++RKP+G
Sbjct: 67 DSRKPVG 73
>gi|397521006|ref|XP_003830597.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Pan paniscus]
Length = 92
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+VQR+M PINLIFR+LQ+++ IQ+WL+EQ ++ IEG IIGFD+YMNLVLDDAEE+H K
Sbjct: 9 RVQRVMVLPINLIFRYLQNRSWIQVWLYEQVNMWIEGCIIGFDKYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|124513718|ref|XP_001350215.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|23615632|emb|CAD52624.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 93
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 1 MAST--KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAE 58
MA+T K+Q+IMTQPIN IFRF +K +QIWL+++ D+RIEG I+GFDEYMN+VLD +
Sbjct: 1 MATTNKKLQKIMTQPINQIFRFFTNKTVVQIWLYDKPDMRIEGIILGFDEYMNMVLDQTK 60
Query: 59 EVHIKKNTRKPLG 71
E+ +KKNT+K LG
Sbjct: 61 EISVKKNTKKELG 73
>gi|431900697|gb|ELK08143.1| Small nuclear ribonucleoprotein E [Pteropus alecto]
Length = 79
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 55/64 (85%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKP 69
M QPINLIFR+LQ++++IQ+WL+EQ ++RIE I+GFDEYMNLVLDDAEE+H K +RK
Sbjct: 1 MVQPINLIFRYLQNRSQIQVWLYEQVNMRIESCIVGFDEYMNLVLDDAEEIHSKTKSRKQ 60
Query: 70 LGFF 73
+G+
Sbjct: 61 VGWI 64
>gi|432108661|gb|ELK33362.1| Small nuclear ribonucleoprotein E [Myotis davidii]
Length = 80
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 54/59 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIK 63
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDE+MNLVLDDA E+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEFMNLVLDDAGEIHSK 67
>gi|71027525|ref|XP_763406.1| small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|85000711|ref|XP_955074.1| small nuclear ribonucleoprotein (E) [Theileria annulata strain
Ankara]
gi|65303220|emb|CAI75598.1| small nuclear ribonucleoprotein (E), putative [Theileria
annulata]
gi|68350359|gb|EAN31123.1| small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 91
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 54/67 (80%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
K+Q+IMTQPIN IFRF R+QIWLF+Q + +IEG I GFDEYMN+VLD+A EVH+KK
Sbjct: 7 KLQKIMTQPINQIFRFFTGGTRVQIWLFDQPNTKIEGTIRGFDEYMNMVLDNATEVHVKK 66
Query: 65 NTRKPLG 71
N +K +G
Sbjct: 67 NVKKDVG 73
>gi|390477421|ref|XP_002760651.2| PREDICTED: small nuclear ribonucleoprotein E-like [Callithrix
jacchus]
Length = 79
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 53/62 (85%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKP 69
M P NLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK
Sbjct: 1 MGHPKNLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQ 60
Query: 70 LG 71
LG
Sbjct: 61 LG 62
>gi|312078394|ref|XP_003141719.1| small nuclear ribonucleoprotein E [Loa loa]
gi|307763117|gb|EFO22351.1| small nuclear ribonucleoprotein E [Loa loa]
Length = 89
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 56/69 (81%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
KVQ++M QPINLIFR+LQ+++RIQIWL+E RIEG IIGFDEYMN+VLD+AEEV++
Sbjct: 5 GGKVQKVMVQPINLIFRYLQNRSRIQIWLYEDITHRIEGYIIGFDEYMNVVLDEAEEVNM 64
Query: 63 KKNTRKPLG 71
K R +G
Sbjct: 65 KTKNRNKVG 73
>gi|403223071|dbj|BAM41202.1| small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 94
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
K+Q+IMTQPIN IFRF R+QIWLFEQ ++IEG I GFDEYMN+VLDDA+EV++KK
Sbjct: 10 KLQKIMTQPINQIFRFFTGGTRVQIWLFEQPYMKIEGTIRGFDEYMNMVLDDAQEVYMKK 69
Query: 65 NTRKPLG 71
N +K +G
Sbjct: 70 NLKKDVG 76
>gi|70954423|ref|XP_746259.1| small nuclear ribonucleoprotein [Plasmodium chabaudi chabaudi]
gi|56526807|emb|CAH78091.1| small nuclear ribonucleoprotein, putative [Plasmodium chabaudi
chabaudi]
Length = 88
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
Query: 1 MAST--KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAE 58
MA+T K+Q+IMTQPIN IFRF ++ +QIWL+++ RIEG+I+GFDEYMN+VLD+++
Sbjct: 1 MATTNKKLQKIMTQPINQIFRFFTNQTVVQIWLYDKPHTRIEGKILGFDEYMNMVLDESK 60
Query: 59 EVHIKKNTRKPLG 71
E+ IKKNT+K LG
Sbjct: 61 EISIKKNTKKELG 73
>gi|354484098|ref|XP_003504228.1| PREDICTED: hypothetical protein LOC100764959 [Cricetulus griseus]
Length = 195
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 55/65 (84%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
Q++M QPINL FR+LQ+ +RIQ+ L+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +
Sbjct: 114 QKVMVQPINLTFRYLQNWSRIQVRLYEQVNIRIEGCIIGFDEYMNLVLDDAEEIHSKTKS 173
Query: 67 RKPLG 71
RK LG
Sbjct: 174 RKQLG 178
>gi|313228047|emb|CBY23197.1| unnamed protein product [Oikopleura dioica]
Length = 90
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 56/69 (81%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
KVQ++M QPINL+FRF Q K R+QIWL++ +LR+EG I+GFDEYMNLVLDD EE+H+
Sbjct: 5 GHKVQKVMVQPINLVFRFFQKKIRVQIWLYDVVNLRLEGIIVGFDEYMNLVLDDVEEMHV 64
Query: 63 KKNTRKPLG 71
K + ++ +G
Sbjct: 65 KTHFKRNVG 73
>gi|68071133|ref|XP_677480.1| small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|82596003|ref|XP_726082.1| small nuclear ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23481340|gb|EAA17647.1| small nuclear ribonucleoprotein homolog [Plasmodium yoelii
yoelii]
gi|56497614|emb|CAH98978.1| small nuclear ribonucleoprotein, putative [Plasmodium berghei]
Length = 88
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
Query: 1 MAST--KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAE 58
MA+T K+Q+IMTQPIN IFRF ++ +QIWL+++ RIEG+I+GFDEYMN+VLD+++
Sbjct: 1 MATTNKKLQKIMTQPINQIFRFFTNQTVVQIWLYDKPHTRIEGKILGFDEYMNMVLDESK 60
Query: 59 EVHIKKNTRKPLG 71
E+ +KKNT+K LG
Sbjct: 61 EISVKKNTKKELG 73
>gi|313239283|emb|CBY14233.1| unnamed protein product [Oikopleura dioica]
gi|313245445|emb|CBY40176.1| unnamed protein product [Oikopleura dioica]
Length = 90
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 56/69 (81%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
KVQ++M QPINL+FRF Q K R+QIWL++ ++R+EG I+GFDEYMNLVLDD EE+H+
Sbjct: 5 GHKVQKVMVQPINLVFRFFQKKIRVQIWLYDVINVRLEGIIVGFDEYMNLVLDDVEEMHV 64
Query: 63 KKNTRKPLG 71
K + +K +G
Sbjct: 65 KTHFKKNVG 73
>gi|403351354|gb|EJY75167.1| putative small nuclear ribonucleoprotein E [Oxytricha trifallax]
Length = 91
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 57/67 (85%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
K+Q++M +PI LI++F Q+K+R++IWL+E DLRIEG+IIGFDEYMN VLDDAEE++ KK
Sbjct: 8 KLQKLMIRPIFLIYKFFQTKSRVEIWLYENADLRIEGKIIGFDEYMNTVLDDAEEIYQKK 67
Query: 65 NTRKPLG 71
R+ LG
Sbjct: 68 GNRRKLG 74
>gi|392334358|ref|XP_002725436.2| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
gi|392355007|ref|XP_002728648.2| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
Length = 92
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QP +LI R+LQ+++RIQ+WL+EQ ++ IEG IIGFDEYMNLVLDD EE+H K
Sbjct: 9 KVQKVMVQPSSLIIRYLQNRSRIQVWLYEQVNMWIEGCIIGFDEYMNLVLDDTEEIHSKT 68
Query: 65 NTRKPLG 71
+ K LG
Sbjct: 69 KSGKQLG 75
>gi|332845410|ref|XP_003315041.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Pan troglodytes]
Length = 92
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 56/67 (83%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+VQR+ PINLIFR+LQ+++ IQ+WL+EQ ++ IEG IIGFD+YMNLVLDDAEE+H K
Sbjct: 9 RVQRVTVLPINLIFRYLQNRSWIQVWLYEQVNMWIEGCIIGFDKYMNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|341891331|gb|EGT47266.1| hypothetical protein CAEBREN_05081 [Caenorhabditis brenneri]
gi|341897649|gb|EGT53584.1| hypothetical protein CAEBREN_23787 [Caenorhabditis brenneri]
Length = 90
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 58/71 (81%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M++ K+Q++M QP+NLIFR+LQ++ R+QIWL+E R+EG IIGFDE+MN+V D+AEEV
Sbjct: 1 MSARKLQKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEEV 60
Query: 61 HIKKNTRKPLG 71
++K N R +G
Sbjct: 61 NMKTNARNKIG 71
>gi|167533668|ref|XP_001748513.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773032|gb|EDQ86677.1| predicted protein [Monosiga brevicollis MX1]
Length = 128
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 54/65 (83%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
+++M QPINL+FRFLQ ++++ IWL+E K + IEG I+GFDEYMNLV+D AEEV+ K T
Sbjct: 8 KKVMVQPINLMFRFLQKRSKVSIWLYEHKHMSIEGVIVGFDEYMNLVMDSAEEVNSKAQT 67
Query: 67 RKPLG 71
R+PLG
Sbjct: 68 RQPLG 72
>gi|452822994|gb|EME30008.1| small nuclear ribonucleoprotein E [Galdieria sulphuraria]
Length = 85
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
+IMTQPINLIFRFLQ++ ++ IWL+E+ + RIEGRI GFDEYMNLVLD+A E ++KKNTR
Sbjct: 5 KIMTQPINLIFRFLQNRTKVVIWLYEETNFRIEGRISGFDEYMNLVLDEAVEWNVKKNTR 64
Query: 68 KPLG 71
LG
Sbjct: 65 INLG 68
>gi|156083891|ref|XP_001609429.1| small nuclear ribonucleoprotein E [Babesia bovis T2Bo]
gi|154796680|gb|EDO05861.1| small nuclear ribonucleoprotein E, putative [Babesia bovis]
Length = 89
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 56/67 (83%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
K+Q+IMTQPIN IFRF S R+QIWL++Q +L+IEG+I GFDEYMN+VL+D EE+++KK
Sbjct: 7 KLQQIMTQPINQIFRFFTSGTRVQIWLYDQPNLKIEGKIRGFDEYMNMVLEDVEELYVKK 66
Query: 65 NTRKPLG 71
R+ LG
Sbjct: 67 QERRALG 73
>gi|395531172|ref|XP_003767656.1| PREDICTED: uncharacterized protein LOC100930096 [Sarcophilus
harrisii]
Length = 226
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 54/63 (85%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
+ T+ NLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK
Sbjct: 147 LTTRGQNLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRK 206
Query: 69 PLG 71
LG
Sbjct: 207 QLG 209
>gi|390459179|ref|XP_003732244.1| PREDICTED: LOW QUALITY PROTEIN: putative small nuclear
ribonucleoprotein polypeptide E-like protein 1-like
[Callithrix jacchus]
Length = 115
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ+IM QPINLIFR+LQ+ ++I++WL+E+ ++ IEG I+ FDEYMNLVLDDAEE H K
Sbjct: 32 KVQKIMVQPINLIFRYLQNGSQIEVWLYERVNIXIEGCIVSFDEYMNLVLDDAEESHSKT 91
Query: 65 NTRKPLG 71
+RK G
Sbjct: 92 KSRKQXG 98
>gi|399218257|emb|CCF75144.1| unnamed protein product [Babesia microti strain RI]
Length = 89
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 54/67 (80%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
++Q+IMTQPIN IFR S R+QIWLF++ +++IEGRI GFDEYMN+VLDDAE V+ K
Sbjct: 7 RLQKIMTQPINQIFRLFTSGVRVQIWLFDEPNIKIEGRIKGFDEYMNMVLDDAESVNQKH 66
Query: 65 NTRKPLG 71
TRK LG
Sbjct: 67 KTRKSLG 73
>gi|390458031|ref|XP_003732042.1| PREDICTED: small nuclear ribonucleoprotein E-like [Callithrix
jacchus]
Length = 89
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 3/67 (4%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLI L ++++IQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLI---LTNRSQIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 65
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 66 KSRKQLG 72
>gi|324518207|gb|ADY47035.1| Small nuclear ribonucleoprotein E [Ascaris suum]
Length = 128
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 56/69 (81%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+ KVQ++M QPINLIFR+LQ+++RIQIWL+E RIEG II FDEYMN+VLD+AEEV++
Sbjct: 44 AGKVQKVMVQPINLIFRYLQNRSRIQIWLYEDVTHRIEGYIIWFDEYMNVVLDEAEEVNL 103
Query: 63 KKNTRKPLG 71
K R +G
Sbjct: 104 KTKNRNKVG 112
>gi|119611901|gb|EAW91495.1| small nuclear ribonucleoprotein polypeptide E, isoform CRA_b
[Homo sapiens]
Length = 84
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 51/57 (89%)
Query: 15 NLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
NLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LG
Sbjct: 11 NLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLG 67
>gi|296222762|ref|XP_002757308.1| PREDICTED: small nuclear ribonucleoprotein E-like [Callithrix
jacchus]
Length = 97
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ++ IQ+W +EQ ++RIEG +IG D+YMNLVL DAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRLWIQVWPYEQVNMRIEGCVIGIDKYMNLVLGDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKRLG 75
>gi|339247003|ref|XP_003375135.1| small nuclear ribonucleoprotein E [Trichinella spiralis]
gi|316971586|gb|EFV55343.1| small nuclear ribonucleoprotein E [Trichinella spiralis]
Length = 93
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
KVQ++M QPINL+FRFLQS R+Q WL+E LRI+G I+GFDE+MN+VL++AEEV
Sbjct: 7 GQPKVQKVMVQPINLVFRFLQSHCRVQFWLYENTHLRIDGYIVGFDEFMNIVLEEAEEVD 66
Query: 62 IKKNTRKPLG 71
+K R+ +G
Sbjct: 67 LKSKQRRQIG 76
>gi|412985477|emb|CCO18923.1| small nuclear ribonucleoprotein E [Bathycoccus prasinos]
Length = 91
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 54/61 (88%), Gaps = 4/61 (6%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQK---DLRIEGRIIGFDEYMNLVLDDAEE 59
+TKVQRIMTQPINLIFRFLQ+K+R+QIWL+E D+ +EG+I+GFDEYMNLVLDD EE
Sbjct: 2 ATKVQRIMTQPINLIFRFLQTKSRVQIWLYEHAANGDV-LEGQIVGFDEYMNLVLDDCEE 60
Query: 60 V 60
V
Sbjct: 61 V 61
>gi|148707697|gb|EDL39644.1| small nuclear ribonucleoprotein E, isoform CRA_b [Mus musculus]
Length = 86
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 51/57 (89%)
Query: 15 NLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
NLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LG
Sbjct: 13 NLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLG 69
>gi|410956998|ref|XP_003985122.1| PREDICTED: LOW QUALITY PROTEIN: putative small nuclear
ribonucleoprotein polypeptide E-like protein 1-like
[Felis catus]
Length = 103
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ+++ IQ+W +EQ ++ IE II FDEY+NLVLDDAEE+H K
Sbjct: 18 KVQKVMVQPINLIFRYLQNRSWIQVWFYEQVNMXIERCIIDFDEYVNLVLDDAEEIHSKT 77
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 78 KSRKQLG 84
>gi|326933691|ref|XP_003212934.1| PREDICTED: small nuclear ribonucleoprotein E-like [Meleagris
gallopavo]
Length = 85
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 51/57 (89%)
Query: 15 NLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
NLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LG
Sbjct: 12 NLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLG 68
>gi|296473647|tpg|DAA15762.1| TPA: small nuclear ribonucleoprotein polypeptide E-like [Bos
taurus]
Length = 92
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 53/67 (79%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
VQ+ QPINLIFR LQ+++RIQ+WL+EQ ++ EG IGFDEYMNLVLDDAE++H K
Sbjct: 9 NVQKGQVQPINLIFRCLQNRSRIQVWLYEQVNMWTEGCTIGFDEYMNLVLDDAEDIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|338259|gb|AAB59365.1| small nuclear ribonucleic protein, partial [Homo sapiens]
Length = 92
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 51/57 (89%)
Query: 15 NLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
NLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LG
Sbjct: 19 NLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLG 75
>gi|268571317|ref|XP_002641005.1| C. briggsae CBR-SNR-6 protein [Caenorhabditis briggsae]
gi|190360255|sp|A8XDT0.1|RUXE_CAEBR RecName: Full=Probable small nuclear ribonucleoprotein E;
Short=snRNP-E; AltName: Full=Sm protein E; Short=Sm-E;
Short=SmE
Length = 90
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+ K+Q++M QP+NLIFR+LQ++ R+QIWL+E R+EG IIGFDE+MN+V D+AEEV
Sbjct: 1 MSQRKIQKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEEV 60
Query: 61 HIKKNTRKPLG 71
++K R +G
Sbjct: 61 NMKTKGRNKIG 71
>gi|290989307|ref|XP_002677279.1| predicted protein [Naegleria gruberi]
gi|284090886|gb|EFC44535.1| predicted protein [Naegleria gruberi]
Length = 89
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 54/67 (80%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
K Q++MTQPI +F +L+ +RIQIWL+E DLRIEG I+GFDEYMN+VLD+ EE++ KK
Sbjct: 3 KKQKMMTQPITQVFEYLKQGSRIQIWLYENTDLRIEGNILGFDEYMNIVLDETEEIYTKK 62
Query: 65 NTRKPLG 71
+ RK +G
Sbjct: 63 SQRKKIG 69
>gi|293334659|ref|NP_001170587.1| uncharacterized protein LOC100384620 [Zea mays]
gi|238006188|gb|ACR34129.1| unknown [Zea mays]
Length = 143
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/44 (100%), Positives = 44/44 (100%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII 44
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII 44
>gi|308470011|ref|XP_003097241.1| CRE-SNR-6 protein [Caenorhabditis remanei]
gi|308240461|gb|EFO84413.1| CRE-SNR-6 protein [Caenorhabditis remanei]
Length = 90
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+ K+Q++M QP+NLIFR+LQ++ R+QIWL+E R+EG IIGFDE+MN+V D+AEEV
Sbjct: 1 MSQRKLQKVMVQPVNLIFRYLQNRTRVQIWLYEDITHRLEGYIIGFDEFMNVVFDEAEEV 60
Query: 61 HIKKNTRKPLG 71
++K R +G
Sbjct: 61 NMKTKGRNKIG 71
>gi|115474803|ref|NP_001060998.1| Os08g0151400 [Oryza sativa Japonica Group]
gi|113622967|dbj|BAF22912.1| Os08g0151400, partial [Oryza sativa Japonica Group]
Length = 64
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/47 (89%), Positives = 46/47 (97%)
Query: 25 ARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
ARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE+++KK+TRK LG
Sbjct: 1 ARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEINVKKDTRKSLG 47
>gi|358056368|dbj|GAA97735.1| hypothetical protein E5Q_04414 [Mixia osmundae IAM 14324]
Length = 91
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 55/67 (82%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + R+M QPIN+IF++LQ+ R+Q+WL++ D R+EG+IIGFDE+MN+VLDDAEE++I
Sbjct: 2 SGRQSRVMVQPINVIFKYLQAGTRVQLWLYDILDFRLEGKIIGFDEFMNVVLDDAEEIYI 61
Query: 63 KKNTRKP 69
K+ +P
Sbjct: 62 KRKDDRP 68
>gi|17556060|ref|NP_499620.1| Protein SNR-6 [Caenorhabditis elegans]
gi|29428070|sp|Q9XTU6.1|RUXE_CAEEL RecName: Full=Probable small nuclear ribonucleoprotein E;
Short=snRNP-E; AltName: Full=Sm protein E; Short=Sm-E;
Short=SmE
gi|3979991|emb|CAB11551.1| Protein SNR-6 [Caenorhabditis elegans]
Length = 90
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 56/71 (78%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M++ K+ ++M QP+NLIFR+LQ++ R+QIWL+E R+EG IIGFDE+MN+V D+AEEV
Sbjct: 1 MSTRKLNKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEEV 60
Query: 61 HIKKNTRKPLG 71
++K R +G
Sbjct: 61 NMKTKGRNKIG 71
>gi|444724508|gb|ELW65111.1| Small nuclear ribonucleoprotein E [Tupaia chinensis]
Length = 92
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
K Q++M QPINLI R LQ+++R Q+WL+EQ ++ IEG II FDEY+NLV DDAEE H K
Sbjct: 9 KAQKVMVQPINLILRNLQNRSRTQVWLYEQVNIWIEGCIISFDEYVNLVSDDAEESHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|219127194|ref|XP_002183825.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404548|gb|EEC44494.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 100
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M +V+++MT PIN+IF LQ K+R+++WL+E L+IEG+IIGFDEYMN+V+DDA E+
Sbjct: 1 MPPKRVKKVMTLPINVIFSHLQKKSRVRLWLYEDSRLQIEGQIIGFDEYMNMVMDDAVEI 60
Query: 61 HIKKNTRKPLG 71
KKN R+ +G
Sbjct: 61 DSKKNVRQEVG 71
>gi|268637717|ref|XP_002649120.1| small nuclear ribonucleoprotein E [Dictyostelium discoideum AX4]
gi|256012871|gb|EEU04068.1| small nuclear ribonucleoprotein E [Dictyostelium discoideum AX4]
Length = 92
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+ + +M +PI LIF+FL K +QI LFE D+RI+G IIG DEYMNLVLD+A E+
Sbjct: 1 MSRHHAKSVMIKPITLIFKFLTQKTEVQIMLFENTDIRIQGVIIGLDEYMNLVLDNASEL 60
Query: 61 HIKKNTRKPLG 71
IKK T+KPLG
Sbjct: 61 SIKKKTKKPLG 71
>gi|388582050|gb|EIM22356.1| Sm-like ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 89
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 52/67 (77%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + Q++M QPIN+IF++LQ + +IQIWL++ D R+EGRIIGFDEYMN++LDD EEV
Sbjct: 2 SGRKQQVMVQPINVIFKYLQQRTKIQIWLYDNVDCRLEGRIIGFDEYMNVILDDVEEVFY 61
Query: 63 KKNTRKP 69
K +P
Sbjct: 62 GKKQSQP 68
>gi|60692530|gb|AAX30632.1| SJCHGC06135 protein [Schistosoma japonicum]
gi|226470320|emb|CAX70440.1| Small nuclear ribonucleoprotein E [Schistosoma japonicum]
gi|226485471|emb|CAX75155.1| Small nuclear ribonucleoprotein E [Schistosoma japonicum]
gi|226485473|emb|CAX75156.1| Small nuclear ribonucleoprotein E [Schistosoma japonicum]
gi|226485475|emb|CAX75157.1| Small nuclear ribonucleoprotein E [Schistosoma japonicum]
Length = 89
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
+ + + PI +++ FLQ KAR+++WL+EQ +LRIEG IIGFDEYMNLVL DA E H+
Sbjct: 5 GGRSHKAIQPPIGVVYNFLQKKARVRVWLYEQCNLRIEGVIIGFDEYMNLVLADACERHM 64
Query: 63 KKNTRKPLG 71
K +KPLG
Sbjct: 65 KSGAKKPLG 73
>gi|109018143|ref|XP_001098283.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Macaca mulatta]
Length = 92
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 55/68 (80%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ+ +T+PI+LIFRFLQ++ +IQ+WL+EQ ++ IEG I GFDEYMN VL DAEE++ K
Sbjct: 9 KVQKAVTEPIDLIFRFLQNRFQIQVWLYEQVNIWIEGCITGFDEYMNFVLVDAEEIYSKT 68
Query: 65 NTRKPLGF 72
RK LG+
Sbjct: 69 KLRKQLGW 76
>gi|402224412|gb|EJU04475.1| LSM-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 93
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 53/67 (79%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ + +QIWL++ ++RIEGRIIGFDE+MN+VLDDA EV +
Sbjct: 2 SGRQQRVMVQPINVIFKNLQQRVPVQIWLYDNVEMRIEGRIIGFDEFMNVVLDDASEVFV 61
Query: 63 KKNTRKP 69
+ ++ P
Sbjct: 62 SEESKSP 68
>gi|332212934|ref|XP_003255575.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Nomascus leucogenys]
Length = 94
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M QPINLIFR+LQ++ IQ+W++EQ +L IIGFDE NLVLDDAEE+H K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRPWIQVWVYEQVNLWTGSFIIGFDECKNLVLDDAEEIHSKT 68
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 69 KSRKQLG 75
>gi|409083288|gb|EKM83645.1| hypothetical protein AGABI1DRAFT_110295 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201658|gb|EKV51581.1| hypothetical protein AGABI2DRAFT_189809 [Agaricus bisporus var.
bisporus H97]
Length = 87
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ++++I +WL++ ++RIEGRIIGFDE+MNLV+DDA EV++
Sbjct: 2 SGRQQRVMVQPINVIFKNLQTRSKISVWLYDNIEMRIEGRIIGFDEFMNLVIDDAVEVYV 61
Query: 63 KK-NTRKPLG 71
K+ RK LG
Sbjct: 62 KEAKPRKELG 71
>gi|281338088|gb|EFB13672.1| hypothetical protein PANDA_003444 [Ailuropoda melanoleuca]
Length = 83
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+V+++M QPINL R+LQ+++RI +WL+EQ ++R EG IIGFDE MNL+LDDAEE+ K
Sbjct: 5 RVRKVMVQPINLTLRYLQNRSRIWVWLYEQVNMRKEGCIIGFDESMNLILDDAEEILSKT 64
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 65 KSRKQLG 71
>gi|164663173|ref|XP_001732708.1| hypothetical protein MGL_0483 [Malassezia globosa CBS 7966]
gi|159106611|gb|EDP45494.1| hypothetical protein MGL_0483 [Malassezia globosa CBS 7966]
Length = 87
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IFR LQ + R+ +WL++ + R+EG+IIGFDE+MN+ L DAEEVH+
Sbjct: 2 SGRQQRVMIQPINVIFRHLQQQTRVSLWLYDNVEYRLEGKIIGFDEFMNVTLADAEEVHM 61
Query: 63 K-KNTRKPLG 71
+ RKPLG
Sbjct: 62 NAQKDRKPLG 71
>gi|299755906|ref|XP_002912145.1| hypothetical protein CC1G_13677 [Coprinopsis cinerea
okayama7#130]
gi|298411435|gb|EFI28651.1| hypothetical protein CC1G_13677 [Coprinopsis cinerea
okayama7#130]
Length = 87
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S++ QR+M QPIN+IF+ LQ K ++ IWL++ ++R+EGRIIGFDE+MNLV+DDA EV++
Sbjct: 2 SSRQQRVMVQPINVIFKNLQQKTKVVIWLYDNIEMRLEGRIIGFDEFMNLVIDDAAEVYV 61
Query: 63 K-KNTRKPLG 71
K R+ LG
Sbjct: 62 KDAKPRRELG 71
>gi|209882013|ref|XP_002142444.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209558050|gb|EEA08095.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 91
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+ Q+IMTQPIN IFR SK R+QIWL++ +L +EG+I GFDEYMN+VLDD EV+ KK
Sbjct: 6 RTQKIMTQPINQIFRLFTSKQRVQIWLYDHPELSLEGKIQGFDEYMNIVLDDVTEVYTKK 65
Query: 65 N--TRKPLG 71
+ +R+ +G
Sbjct: 66 DEVSRRDIG 74
>gi|353227274|emb|CCA77787.1| probable small nuclear ribonucleoprotein E [Piriformospora indica
DSM 11827]
Length = 87
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + R+M QPIN+IF+ LQ K ++ IWL++ ++RIEGRIIGFDEYMN+V+DDA EV+
Sbjct: 2 SGRQTRVMVQPINVIFKHLQQKTKVVIWLYDNVEMRIEGRIIGFDEYMNVVMDDATEVYT 61
Query: 63 KKNTRK-PLG 71
K+ PLG
Sbjct: 62 KEGRPSVPLG 71
>gi|254567830|ref|XP_002491025.1| Core Sm protein Sm E [Komagataella pastoris GS115]
gi|238030822|emb|CAY68745.1| Core Sm protein Sm E [Komagataella pastoris GS115]
Length = 88
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 56/71 (78%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+S++ Q++M PINL+F+FLQ ++ +QIWL+EQ + RI G I GFDE+MN+V+D+A E+
Sbjct: 1 MSSSRTQKVMVPPINLMFKFLQQQSTVQIWLYEQNNTRINGIIKGFDEFMNVVVDEAIEI 60
Query: 61 HIKKNTRKPLG 71
++K ++ LG
Sbjct: 61 NLKTQKQRKLG 71
>gi|397599586|gb|EJK57461.1| hypothetical protein THAOC_22489 [Thalassiosira oceanica]
Length = 86
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M KV+++MT PIN+IF LQ K R++IWL+E + IEG+IIGFDEYMN VLD A EV
Sbjct: 1 MPPRKVKKVMTLPINVIFGHLQKKTRVKIWLYEDTRMSIEGQIIGFDEYMNFVLDSATEV 60
Query: 61 HIKKNTRKPLG 71
+K R +G
Sbjct: 61 DMKTGKRTDVG 71
>gi|389751015|gb|EIM92088.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 87
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ + ++ +WL++ ++RIEGRIIGFDE+MN+V+DDA EV++
Sbjct: 2 SGRQQRVMVQPINVIFKNLQQRTKVVVWLYDNIEMRIEGRIIGFDEFMNIVIDDAAEVYV 61
Query: 63 KK-NTRKPLG 71
K+ R+ LG
Sbjct: 62 KEAKPRRELG 71
>gi|281353334|gb|EFB28918.1| hypothetical protein PANDA_013986 [Ailuropoda melanoleuca]
Length = 86
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 51/67 (76%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ++M I LIFR LQ++ +IQ+WL Q ++RIEG I FDEY+NLVLDDA+E+H K
Sbjct: 6 KVQKVMVHTIILIFRSLQNRFQIQVWLHNQANMRIEGCIHSFDEYVNLVLDDAKEIHYKT 65
Query: 65 NTRKPLG 71
+RK LG
Sbjct: 66 KSRKQLG 72
>gi|224003489|ref|XP_002291416.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973192|gb|EED91523.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 86
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M KV+++MT PIN+IF LQ K R++IWL+E + IEG+IIGFDEYMN VLD AEEV
Sbjct: 1 MPPRKVKKVMTLPINVIFGHLQKKNRVKIWLYEDTRMTIEGQIIGFDEYMNFVLDGAEEV 60
Query: 61 HIKKNTRKPLG 71
K + +G
Sbjct: 61 DTKSGKKTEVG 71
>gi|449550635|gb|EMD41599.1| hypothetical protein CERSUDRAFT_61589 [Ceriporiopsis
subvermispora B]
Length = 87
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ + +I IWL++ ++RIEGRIIGFDE+MN+V+D+A EV++
Sbjct: 2 SNRQQRVMVQPINVIFKNLQQRTKIVIWLYDNIEMRIEGRIIGFDEFMNVVIDEAAEVYV 61
Query: 63 K-KNTRKPLG 71
K R+ LG
Sbjct: 62 KDAKPRRELG 71
>gi|260947628|ref|XP_002618111.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238847983|gb|EEQ37447.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 88
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 54/71 (76%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+S K ++ M PINLIF++LQ ++ + IWL+EQ RI+G++ GFDE+MN+V+D+AEE+
Sbjct: 1 MSSVKSKKSMLPPINLIFKYLQQQSVVTIWLYEQTQSRIQGKVRGFDEFMNIVIDEAEEI 60
Query: 61 HIKKNTRKPLG 71
K +R+ LG
Sbjct: 61 STKDGSRETLG 71
>gi|170085379|ref|XP_001873913.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651465|gb|EDR15705.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 87
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ K ++ IWL++ ++RIEGRIIGFDE+MN+V+D+A EV +
Sbjct: 2 SGRQQRVMVQPINVIFKNLQQKTKVVIWLYDNVEMRIEGRIIGFDEFMNIVIDEAAEVFV 61
Query: 63 K-KNTRKPLG 71
K R+ LG
Sbjct: 62 KDAKPRRELG 71
>gi|328859947|gb|EGG09054.1| hypothetical protein MELLADRAFT_96304 [Melampsora larici-populina
98AG31]
Length = 96
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 12/81 (14%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ+ + IWL++ + R+EG+IIGFDE+MN+VLD+A EV +
Sbjct: 2 SGRQQRVMVQPINVIFKHLQAGQLVHIWLYDNTEFRLEGKIIGFDEFMNVVLDNASEVWV 61
Query: 63 K------------KNTRKPLG 71
K K TR PLG
Sbjct: 62 KAKKGTPHREAVEKGTRVPLG 82
>gi|395326007|gb|EJF58421.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 87
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ + ++ IWL++ ++RIEG IIGFDE+MN+V+DDA EV++
Sbjct: 2 SNRQQRVMVQPINVIFKNLQQRTKVVIWLYDNIEMRIEGTIIGFDEFMNVVIDDAAEVYV 61
Query: 63 K-KNTRKPLG 71
K R+ LG
Sbjct: 62 KDAKPRRELG 71
>gi|302695849|ref|XP_003037603.1| hypothetical protein SCHCODRAFT_48486 [Schizophyllum commune
H4-8]
gi|300111300|gb|EFJ02701.1| hypothetical protein SCHCODRAFT_48486 [Schizophyllum commune
H4-8]
Length = 89
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ K+ + IWL++ ++RIEGRIIGFDE+MN+V+D+A EV I
Sbjct: 2 SQRQQRVMVQPINVIFKNLQQKSHVCIWLYDNIEMRIEGRIIGFDEFMNVVIDEAVEVFI 61
Query: 63 KK-NTRKPLG 71
K+ R+ LG
Sbjct: 62 KEAKPRRELG 71
>gi|146182714|ref|XP_001471048.1| Small nuclear ribonucleoprotein E, putative [Tetrahymena
thermophila]
gi|146143746|gb|EDK31351.1| Small nuclear ribonucleoprotein E, putative [Tetrahymena
thermophila SB210]
Length = 140
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 50/69 (72%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S K + +T P+ IF FLQ + R+QIWLFE ++++EG+IIGFDEYMN+VLD+ EV
Sbjct: 2 SKKQTKTITNPLTTIFGFLQKQVRVQIWLFENTEIKLEGKIIGFDEYMNMVLDETSEVDC 61
Query: 63 KKNTRKPLG 71
K N ++ +G
Sbjct: 62 KTNQKREIG 70
>gi|392571823|gb|EIW64995.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 87
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ + ++ IWL++ D+RIEG IIGFDE+MN+V++DA EV++
Sbjct: 2 SGRQQRVMVQPINVIFKNLQQRTKVVIWLYDNIDMRIEGTIIGFDEFMNIVIEDAAEVYV 61
Query: 63 K-KNTRKPLG 71
K R+ LG
Sbjct: 62 KDAKPRRELG 71
>gi|126647281|ref|XP_001388059.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
gi|126117147|gb|EAZ51247.1| small nuclear ribonucleoprotein, putative [Cryptosporidium parvum
Iowa II]
Length = 92
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
K Q++M QPIN IF SK R+QIWL++ K+L +EG I GFDEYMN+VLD A EV+ KK
Sbjct: 8 KTQKMMLQPINQIFHLFTSKQRVQIWLYDHKNLVLEGVIQGFDEYMNIVLDQASEVYTKK 67
Query: 65 NTRK 68
R+
Sbjct: 68 EVRR 71
>gi|19112516|ref|NP_595724.1| Sm snRNP core protein Sme1 [Schizosaccharomyces pombe 972h-]
gi|74638881|sp|Q9USZ3.1|RUXE_SCHPO RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|6165482|emb|CAB59808.1| Sm snRNP core protein Sme1 [Schizosaccharomyces pombe]
Length = 84
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S +VQ++M PIN IF+ LQ + IWLFEQ D+R++G+I GFDE+MN+VLDDA +V
Sbjct: 2 SGRVQKVMIPPINFIFKLLQQHTPVSIWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQVDA 61
Query: 63 KKNTRK 68
K N R+
Sbjct: 62 KNNKRE 67
>gi|390604052|gb|EIN13443.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 87
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ + ++ +WL++ ++RIEGRIIGFDE+MN+V+D+A EV++
Sbjct: 2 SGRQQRVMVQPINVIFKNLQQRQKVVVWLYDNIEMRIEGRIIGFDEFMNVVMDEAAEVYV 61
Query: 63 KK-NTRKPLG 71
K+ R+ +G
Sbjct: 62 KEAKPRREIG 71
>gi|343429490|emb|CBQ73063.1| probable small nuclear ribonucleoprotein E [Sporisorium reilianum
SRZ2]
Length = 85
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
++ QPIN+IFR LQ + R+ +WL++ D RIEG+IIGFDE+MN+ L DAEEV KK+ R
Sbjct: 6 KVSVQPINIIFRHLQQQTRVSLWLYDNIDFRIEGKIIGFDEFMNVTLADAEEVWTKKDKR 65
Query: 68 KPLG 71
LG
Sbjct: 66 VELG 69
>gi|403411704|emb|CCL98404.1| predicted protein [Fibroporia radiculosa]
Length = 87
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 51/61 (83%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ + ++ IWL++ ++RIEGRIIGFDE+MN+V+D+A EV++
Sbjct: 2 SGRQQRVMVQPINVIFKNLQQRTKVVIWLYDNIEMRIEGRIIGFDEFMNVVIDEATEVYV 61
Query: 63 K 63
K
Sbjct: 62 K 62
>gi|331212255|ref|XP_003307397.1| small nuclear ribonucleoprotein E [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309297800|gb|EFP74391.1| small nuclear ribonucleoprotein E [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 98
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S + QR+M QPIN+IF+ LQ+ + IWL++ + R+EG+IIGFDE+MN+VLD+A EV +
Sbjct: 2 SGRQQRVMVQPINVIFKHLQAGQLVHIWLYDNTEFRLEGKIIGFDEFMNVVLDNASEVWV 61
Query: 63 KKNTRKP 69
K P
Sbjct: 62 KSKKGTP 68
>gi|71015586|ref|XP_758826.1| hypothetical protein UM02679.1 [Ustilago maydis 521]
gi|46098616|gb|EAK83849.1| hypothetical protein UM02679.1 [Ustilago maydis 521]
Length = 136
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
++ QPIN+IFR LQ + R+ +WL++ D RIEG+IIGFDE+MN+ L DAEEV KK+
Sbjct: 5 SKVSVQPINIIFRHLQQQTRVSLWLYDNVDFRIEGKIIGFDEFMNVTLADAEEVWTKKDN 64
Query: 67 RK 68
++
Sbjct: 65 KR 66
>gi|338724569|ref|XP_003364968.1| PREDICTED: small nuclear ribonucleoprotein E-like, partial [Equus
caballus]
Length = 71
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 18 FRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
F +L ++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LG
Sbjct: 1 FLWLFQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLG 54
>gi|430813791|emb|CCJ28894.1| unnamed protein product [Pneumocystis jirovecii]
Length = 92
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
Q++M PIN IF+ LQ + IWL+EQ +++IEG+I GFDE+MNLV+D+A E+ KKN+
Sbjct: 11 QKVMIPPINFIFKLLQQHTTVCIWLYEQTEMKIEGKIRGFDEFMNLVIDEAVEIGQKKNS 70
Query: 67 RKPLG 71
+ LG
Sbjct: 71 SRSLG 75
>gi|400599169|gb|EJP66873.1| small nuclear ribonucleoprotein E [Beauveria bassiana ARSEF 2860]
Length = 95
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-----IK 63
++ PIN+IF+ LQS A + +WL+EQ +R+EG+I GFDE+MNLVLDDA EV
Sbjct: 11 VLLPPINMIFKLLQSNATVSVWLYEQLGIRVEGKIRGFDEFMNLVLDDAVEVRQITKTND 70
Query: 64 KNTRKPLG 71
K TR+PLG
Sbjct: 71 KETRRPLG 78
>gi|358399324|gb|EHK48667.1| hypothetical protein TRIATDRAFT_298071 [Trichoderma atroviride
IMI 206040]
Length = 96
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-----IK 63
++ PIN+IF+ LQS A + +WL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 12 VLLPPINMIFKLLQSNATVSVWLYEQLSIRIEGKIRGFDEFMNLVIDDAVEVKQITKTND 71
Query: 64 KNTRKPLG 71
K +RKPLG
Sbjct: 72 KESRKPLG 79
>gi|300176178|emb|CBK23489.2| unnamed protein product [Blastocystis hominis]
Length = 95
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 9/74 (12%)
Query: 7 QRIMTQPINLIFRFLQS---------KARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDA 57
+ + QPI++IFRFLQ K +QIWL++Q +RIEG I GFDEYMN+VLD+A
Sbjct: 6 NKTLLQPIDIIFRFLQGISFFKMATHKTGVQIWLYDQPHVRIEGVINGFDEYMNIVLDNA 65
Query: 58 EEVHIKKNTRKPLG 71
EV+IK TRK LG
Sbjct: 66 SEVNIKMKTRKNLG 79
>gi|448534499|ref|XP_003870814.1| hypothetical protein CORT_0F04610 [Candida orthopsilosis Co
90-125]
gi|380355169|emb|CCG24686.1| hypothetical protein CORT_0F04610 [Candida orthopsilosis]
Length = 86
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+S V + PINLIF+FLQ ++ + IWL+E+ RI+G+I GFDEYMNLV+D+AEE+
Sbjct: 1 MSSKSVSKTNLPPINLIFKFLQQQSLVTIWLYEKSHSRIQGKIQGFDEYMNLVIDEAEEI 60
Query: 61 HIKKNTRKPLG 71
K T PLG
Sbjct: 61 VNGKKT--PLG 69
>gi|340518388|gb|EGR48629.1| predicted protein [Trichoderma reesei QM6a]
Length = 96
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-----IK 63
++ PIN+IF+ LQ+ A + +WL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 12 VLLPPINMIFKLLQNNATVSVWLYEQLSIRIEGKIRGFDEFMNLVIDDAVEVKQITKTND 71
Query: 64 KNTRKPLG 71
K TRKPLG
Sbjct: 72 KETRKPLG 79
>gi|358383788|gb|EHK21450.1| hypothetical protein TRIVIDRAFT_91240 [Trichoderma virens Gv29-8]
Length = 96
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-----IK 63
++ PIN+IF+ LQ+ A + +WL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 12 VLLPPINMIFKLLQNNATVSVWLYEQLSIRIEGKIRGFDEFMNLVIDDAVEVKQITKTND 71
Query: 64 KNTRKPLG 71
K TRKPLG
Sbjct: 72 KETRKPLG 79
>gi|149235887|ref|XP_001523821.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452197|gb|EDK46453.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 86
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+S +++ PINLIF+FLQ ++ + IWL+EQ D RI+G+I+GFDE+MNLV+D+AEE+
Sbjct: 1 MSSQSLKKSNLPPINLIFKFLQQQSLVTIWLYEQIDYRIQGKILGFDEFMNLVVDEAEEL 60
Query: 61 HIKKNTR 67
K T+
Sbjct: 61 ADGKRTK 67
>gi|443894424|dbj|GAC71772.1| small nuclear ribonucleoprotein E [Pseudozyma antarctica T-34]
Length = 86
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 48/61 (78%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
++ QPIN+IFR LQ + R+ +WL++ D RIEG+IIGFDE+MN+ L DAEEV +KK+ +
Sbjct: 6 KVSVQPINIIFRHLQQQTRVSLWLYDNVDFRIEGKIIGFDEFMNVTLADAEEVWLKKDHK 65
Query: 68 K 68
+
Sbjct: 66 R 66
>gi|301115033|ref|XP_002999286.1| small nuclear ribonucleoprotein E [Phytophthora infestans T30-4]
gi|262111380|gb|EEY69432.1| small nuclear ribonucleoprotein E [Phytophthora infestans T30-4]
Length = 79
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 17 IFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
+F K+RIQ+WL+EQ + RIEGRI+GFDEYMNLVLDDAEE+ +K R PLG
Sbjct: 3 LFWLSTQKSRIQVWLYEQVNTRIEGRIMGFDEYMNLVLDDAEELDVKNLKRTPLG 57
>gi|297295616|ref|XP_002804656.1| PREDICTED: small nuclear ribonucleoprotein E-like [Macaca
mulatta]
Length = 105
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 48/58 (82%)
Query: 14 INLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
+NLIFR+LQ+++RIQ+WL+EQ + RIEG II FDEY+ LVLD+AEE++ K +R +G
Sbjct: 31 VNLIFRYLQNRSRIQVWLYEQVNTRIEGCIISFDEYVKLVLDNAEEIYSKTKSRMQVG 88
>gi|344289176|ref|XP_003416321.1| PREDICTED: LOW QUALITY PROTEIN: small nuclear ribonucleoprotein
E-like [Loxodonta africana]
Length = 124
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNL-VLDDAEEVH 61
S K+Q+++ QP LI R+LQS + IQ+WL EQ ++R+E +I FDE MNL DDAEE+H
Sbjct: 18 SQKMQKVIMQPTTLICRYLQSGSWIQVWLQEQVNIRVEDCVIXFDECMNLGAEDDAEEIH 77
Query: 62 IKKNTRKPLGFF 73
K +RK LG+
Sbjct: 78 SKTTSRKELGWI 89
>gi|389633501|ref|XP_003714403.1| sm snRNP core protein Sme1 [Magnaporthe oryzae 70-15]
gi|351646736|gb|EHA54596.1| sm snRNP core protein Sme1 [Magnaporthe oryzae 70-15]
Length = 95
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 5/69 (7%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH--IKKN 65
+I+ PIN IF+ LQS A + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV K N
Sbjct: 11 KILLPPINCIFKLLQSHATVSIWLYEQLGIRIEGKIRGFDEFMNLVIDDAIEVKQITKDN 70
Query: 66 T---RKPLG 71
T R+PLG
Sbjct: 71 TEEKRRPLG 79
>gi|67478492|ref|XP_654638.1| small nuclear ribonucleoprotein [Entamoeba histolytica HM-1:IMSS]
gi|56471705|gb|EAL49252.1| small nuclear ribonucleoprotein, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407040392|gb|EKE40106.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449708080|gb|EMD47607.1| small nuclear ribonucleoprotein, putative [Entamoeba histolytica
KU27]
Length = 89
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M TK+ + M P+ I + K R+ IWLFE LRIEG + GFD+Y+NLVL D EEV
Sbjct: 1 MNRTKMTKAMILPVKFIVNLAKHKQRVSIWLFENTALRIEGTLSGFDQYINLVLTDTEEV 60
Query: 61 HIKKNTRKPLG 71
++K NTR+ +G
Sbjct: 61 YLKTNTRRKIG 71
>gi|402079438|gb|EJT74703.1| sm snRNP core protein Sme1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 94
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH--IKKNT 66
I+ PIN IF+ LQS A +QIWL+EQ +RIEG+I GFDE+MNLVLDDA E+ K+N
Sbjct: 12 ILLPPINFIFKLLQSHAPVQIWLYEQLGIRIEGKIRGFDEFMNLVLDDAVEIKQVTKENP 71
Query: 67 ---RKPLG 71
R+PLG
Sbjct: 72 EEKRRPLG 79
>gi|432090682|gb|ELK24023.1| Small nuclear ribonucleoprotein E [Myotis davidii]
Length = 128
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 20/87 (22%)
Query: 3 STKVQRIMTQPINLIFRFLQ-------------------SKARIQIWLFEQKDLRIEGRI 43
KVQ++M QPI + + Q +++RIQ+WL+EQ ++RIEG I
Sbjct: 7 GQKVQKVMVQPI-VSYAECQDREVRARKRGGKADGGLGGARSRIQVWLYEQVNMRIEGCI 65
Query: 44 IGFDEYMNLVLDDAEEVHIKKNTRKPL 70
IGFDEYMNLVLDDAEE+H K +RK L
Sbjct: 66 IGFDEYMNLVLDDAEEIHSKTKSRKQL 92
>gi|440468395|gb|ELQ37560.1| sm snRNP core protein Sme1 [Magnaporthe oryzae Y34]
gi|440482793|gb|ELQ63252.1| sm snRNP core protein Sme1 [Magnaporthe oryzae P131]
Length = 126
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH--IKKN 65
+I+ PIN IF+ LQS A + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV K N
Sbjct: 11 KILLPPINCIFKLLQSHATVSIWLYEQLGIRIEGKIRGFDEFMNLVIDDAVEVKQITKDN 70
Query: 66 T---RKPLGF 72
T R+PL +
Sbjct: 71 TEEKRRPLAY 80
>gi|46111729|ref|XP_382922.1| hypothetical protein FG02746.1 [Gibberella zeae PH-1]
gi|408389795|gb|EKJ69221.1| hypothetical protein FPSE_10604 [Fusarium pseudograminearum
CS3096]
Length = 96
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-----IK 63
++ PIN IF+ LQS A + +WL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 12 VLVPPINFIFKLLQSHATVSVWLYEQLSIRIEGKIRGFDEFMNLVIDDAVEVKQITKTND 71
Query: 64 KNTRKPLG 71
K +R+PLG
Sbjct: 72 KESRRPLG 79
>gi|302891819|ref|XP_003044791.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256725716|gb|EEU39078.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 96
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-----IK 63
++ PIN IF+ LQS A + +WL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 12 VLLLPINFIFKLLQSHATVSVWLYEQLSIRIEGKIRGFDEFMNLVIDDAVEVKQITKTND 71
Query: 64 KNTRKPLG 71
K TR+PLG
Sbjct: 72 KETRRPLG 79
>gi|296411223|ref|XP_002835333.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629111|emb|CAZ79490.1| unnamed protein product [Tuber melanosporum]
Length = 93
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIK----K 64
++ PIN IF+ LQS A +QIWL+EQ +RIEG+I GFDE+MNLV+DDA EV +K +
Sbjct: 12 VLLPPINFIFKLLQSHATVQIWLYEQLAIRIEGKIRGFDEFMNLVIDDAVEVKLKTKDEE 71
Query: 65 NTRKPLG 71
+R+ LG
Sbjct: 72 ESRRELG 78
>gi|388853510|emb|CCF52909.1| probable small nuclear ribonucleoprotein E [Ustilago hordei]
Length = 86
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
++ QPIN+IFR LQ + R+ +WL++ D RIEG+IIGFDE+MN+ L DAEEV KK+ +
Sbjct: 6 KVSVQPINVIFRHLQQQTRVSLWLYDNIDFRIEGKIIGFDEFMNVTLADAEEVWTKKDNK 65
>gi|58271500|ref|XP_572906.1| small nuclear ribonucleoprotein E [Cryptococcus neoformans var.
neoformans JEC21]
gi|134115058|ref|XP_773827.1| hypothetical protein CNBH2790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256455|gb|EAL19180.1| hypothetical protein CNBH2790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229165|gb|AAW45599.1| small nuclear ribonucleoprotein E, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 92
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 43/55 (78%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
+++M QPIN+IF LQ R+ IWL++ D RIE IIGFDE+MN+VLDDAEEV+
Sbjct: 4 RKVMVQPINIIFSHLQKHNRVAIWLYDNNDFRIEAYIIGFDEFMNVVLDDAEEVY 58
>gi|348683781|gb|EGZ23596.1| hypothetical protein PHYSODRAFT_486753 [Phytophthora sojae]
Length = 70
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 24 KARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
K+RIQ+WL+EQ + RIEGRI+GFDEYMNLVLDDAEE+ +K R PLG
Sbjct: 1 KSRIQVWLYEQVNTRIEGRIMGFDEYMNLVLDDAEELDVKNLKRTPLG 48
>gi|405122118|gb|AFR96885.1| small nuclear ribonucleoprotein E [Cryptococcus neoformans var.
grubii H99]
Length = 92
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 43/55 (78%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
+++M QPIN+IF LQ R+ +WL++ D RIE IIGFDE+MN+VLDDAEEV+
Sbjct: 4 RKVMVQPINIIFSHLQKHNRVAVWLYDNNDFRIEAYIIGFDEFMNVVLDDAEEVY 58
>gi|322696736|gb|EFY88524.1| LSM domain-containing protein [Metarhizium acridum CQMa 102]
Length = 96
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-----IK 63
++ PIN+IF+ LQS A + +WL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 12 VLLPPINMIFKLLQSNATVSVWLYEQLSIRIEGKIRGFDEFMNLVIDDAVEVSQVTKTND 71
Query: 64 KNTRKPLG 71
K TRK LG
Sbjct: 72 KETRKQLG 79
>gi|213407688|ref|XP_002174615.1| Sm snRNP core protein Sme1 [Schizosaccharomyces japonicus yFS275]
gi|212002662|gb|EEB08322.1| Sm snRNP core protein Sme1 [Schizosaccharomyces japonicus yFS275]
Length = 84
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S +VQ++M PIN IF+ LQ +QIWL+EQ+ R+EG I GFDE+MN+VLDDA +V
Sbjct: 2 SGRVQKVMLPPINFIFKLLQQHTPVQIWLYEQQTHRLEGLIRGFDEFMNIVLDDAVQVD- 60
Query: 63 KKNTRKPLG 71
KN ++ LG
Sbjct: 61 DKNRKRALG 69
>gi|431892912|gb|ELK03340.1| AP-1 complex subunit mu-2 [Pteropus alecto]
Length = 181
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 24 KARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK L
Sbjct: 18 RSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLA 65
>gi|150865716|ref|XP_001385048.2| hypothetical protein PICST_47366 [Scheffersomyces stipitis CBS
6054]
gi|149386972|gb|ABN67019.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 90
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 1 MASTKV--QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAE 58
M+S K ++ M PINLIF++LQ ++ + IWL+EQ RI+G+I GFDE+MN+V+DDA
Sbjct: 1 MSSHKATGKKSMLPPINLIFKYLQQQSPVTIWLYEQTQSRIQGKIRGFDEFMNIVIDDAV 60
Query: 59 EVHIKKNTRKPLG 71
E+ K +++ LG
Sbjct: 61 EISTKDGSKEELG 73
>gi|440636915|gb|ELR06834.1| hypothetical protein GMDG_08125 [Geomyces destructans 20631-21]
Length = 98
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV-HIKKN-- 65
++ PIN+IF+ LQ+ + + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV I K
Sbjct: 14 VLLPPINMIFKLLQTNSTVSIWLYEQIAIRIEGKIRGFDEFMNLVIDDAIEVGQITKTNE 73
Query: 66 --TRKPLG 71
TR+PLG
Sbjct: 74 TETRRPLG 81
>gi|294659407|ref|XP_461772.2| DEHA2G05192p [Debaryomyces hansenii CBS767]
gi|199433937|emb|CAG90229.2| DEHA2G05192p [Debaryomyces hansenii CBS767]
Length = 90
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
++ M PINLIF++LQ ++ + IWL+EQ RI+G+I GFDE+MN+V+DDA EV+ +
Sbjct: 9 KKTMIPPINLIFKYLQQQSPVTIWLYEQTHSRIQGKIRGFDEFMNVVIDDAMEVNTNDGS 68
Query: 67 RKPLG 71
++ LG
Sbjct: 69 KEELG 73
>gi|320589574|gb|EFX02030.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 96
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV-HIKKN-- 65
++ PIN+IF+ LQS A + +WL+EQ RIEG+I GFDE++NLVLDDA V I K
Sbjct: 12 VLLPPINMIFKLLQSHATVSVWLYEQLSFRIEGKIRGFDEFLNLVLDDAVVVGQITKTQE 71
Query: 66 --TRKPLG 71
TRKPLG
Sbjct: 72 EETRKPLG 79
>gi|346324729|gb|EGX94326.1| small nuclear ribonucleoprotein E [Cordyceps militaris CM01]
Length = 141
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-----IK 63
++ PIN+IF+ LQ+ + + +WL+EQ +RIEG+I GFDE+MNLVLDDA EV
Sbjct: 57 VLLPPINMIFKLLQTNSTVSVWLYEQLGIRIEGKIRGFDEFMNLVLDDAVEVRQITKTND 116
Query: 64 KNTRKPLG 71
K +R+PLG
Sbjct: 117 KESRRPLG 124
>gi|407924103|gb|EKG17161.1| hypothetical protein MPH_05615 [Macrophomina phaseolina MS6]
Length = 95
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI---- 62
+++ PIN IF+ LQ++A + IWLFEQ LRIEG+I GFDE+MNLV+DDA EV +
Sbjct: 10 NKVLLPPINFIFKLLQTRATVSIWLFEQVGLRIEGKIRGFDEFMNLVIDDAIEVKLATKD 69
Query: 63 KKNTRKPLG 71
+ R+ LG
Sbjct: 70 SEEKRRALG 78
>gi|448118085|ref|XP_004203416.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
gi|448120526|ref|XP_004203999.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
gi|359384284|emb|CCE78988.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
gi|359384867|emb|CCE78402.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
Length = 90
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 47/62 (75%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKP 69
M PINLIF++LQ ++ + IWLFEQ RI+G+I GFDE+MN+V+DDA+E+ + + +
Sbjct: 12 MLPPINLIFKYLQQQSLVTIWLFEQTQSRIQGKIRGFDEFMNIVIDDAKEISTEDGSSEA 71
Query: 70 LG 71
LG
Sbjct: 72 LG 73
>gi|146418481|ref|XP_001485206.1| hypothetical protein PGUG_02935 [Meyerozyma guilliermondii ATCC
6260]
Length = 84
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKP 69
M PIN+IF+FLQ + + IWL+EQ L+I+GRI GFDE+MN+V+DDA V I K++ P
Sbjct: 8 MLPPINVIFKFLQQQVPVTIWLYEQTQLKIQGRIRGFDEFMNIVIDDA--VEILKDSEVP 65
Query: 70 LG 71
LG
Sbjct: 66 LG 67
>gi|321262372|ref|XP_003195905.1| small nuclear ribonucleoprotein E [Cryptococcus gattii WM276]
gi|317462379|gb|ADV24118.1| Small nuclear ribonucleoprotein E, putative [Cryptococcus gattii
WM276]
Length = 92
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 43/55 (78%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
+++M QPIN+IF LQ R+ IWL++ + RIE IIGFDE+MN+VLDDAEEV+
Sbjct: 4 RKVMVQPINIIFSHLQKHNRVAIWLYDNNEFRIEAYIIGFDEFMNVVLDDAEEVY 58
>gi|417407598|gb|JAA50403.1| Putative small nuclear ribonucleoprotein e, partial [Desmodus
rotundus]
Length = 91
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
KVQ+ M QP NL+ R LQ+++RIQ WL EQ + R+EG + GF E ++LVLD+AEE+
Sbjct: 9 KVQKEMVQPTNLVLRSLQNRSRIQAWLSEQVNRRLEGCVTGFGECVSLVLDEAEEIQSXX 68
Query: 65 NTRKP 69
T++P
Sbjct: 69 XTKQP 73
>gi|429850739|gb|ELA25982.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 96
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 5/64 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH--IKKN---TR 67
PIN IFR LQ +QIWL+EQ +RIEG+I GFDE+MNLV+DDA EV K N +R
Sbjct: 16 PINFIFRLLQQHTTVQIWLYEQLSIRIEGKIRGFDEFMNLVIDDAVEVKQVTKTNPEESR 75
Query: 68 KPLG 71
+PLG
Sbjct: 76 RPLG 79
>gi|340960769|gb|EGS21950.1| small nuclear ribonucleoprotein E-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 98
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
+R++ PIN +FR LQ + +QIWL+EQ +RI G I GFDE+MNLV+DDA E+ + T
Sbjct: 10 RRVLLPPINFLFRLLQQRTPVQIWLYEQLAIRITGVIRGFDEFMNLVIDDAVEIKLSPKT 69
Query: 67 RKP 69
+P
Sbjct: 70 NEP 72
>gi|346474106|gb|AEO36897.1| hypothetical protein [Amblyomma maculatum]
Length = 78
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKP 69
MT P +L + + +ARIQ+WL+E LRIEG IIGFDEYMNLVLDDAEE++ K RK
Sbjct: 1 MTMPGHL--QRPRQRARIQVWLYENVALRIEGHIIGFDEYMNLVLDDAEEIYTKSKQRKQ 58
Query: 70 LG 71
+G
Sbjct: 59 VG 60
>gi|281204021|gb|EFA78217.1| hypothetical protein PPL_08867 [Polysphondylium pallidum PN500]
Length = 80
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 10/71 (14%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+ + + +M +P++++ QI LFEQ DLRIEG IIG DEYMNLVLD+A E+
Sbjct: 1 MSEYRQKSVMLKPVSVV----------QIMLFEQTDLRIEGVIIGLDEYMNLVLDNAFEI 50
Query: 61 HIKKNTRKPLG 71
+KK TRKPLG
Sbjct: 51 SMKKKTRKPLG 61
>gi|330802344|ref|XP_003289178.1| hypothetical protein DICPUDRAFT_35231 [Dictyostelium purpureum]
gi|325080754|gb|EGC34296.1| hypothetical protein DICPUDRAFT_35231 [Dictyostelium purpureum]
Length = 77
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 16 LIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
LIF+FL K +QI L+E D RI+G IIG DEYMNLVLD+A E +KK T+KPLG
Sbjct: 1 LIFKFLTQKTEVQIMLYENVDTRIQGVIIGLDEYMNLVLDNAFEFSLKKKTKKPLG 56
>gi|302422556|ref|XP_003009108.1| small nuclear ribonucleoprotein E [Verticillium albo-atrum
VaMs.102]
gi|261352254|gb|EEY14682.1| small nuclear ribonucleoprotein E [Verticillium albo-atrum
VaMs.102]
gi|346970265|gb|EGY13717.1| LSM domain-containing protein [Verticillium dahliae VdLs.17]
Length = 94
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-----IK 63
++ PIN IF+ LQ +A +Q+WL+EQ +RIEG+I GFDE+MNLV+D+A EV K
Sbjct: 12 VLLPPINFIFKLLQQQATVQVWLYEQLSIRIEGKIRGFDEFMNLVIDNAVEVKQITKTNK 71
Query: 64 KNTRKPLG 71
+ TR+ LG
Sbjct: 72 EETRRSLG 79
>gi|50549605|ref|XP_502273.1| YALI0D01155p [Yarrowia lipolytica]
gi|49648141|emb|CAG80459.1| YALI0D01155p [Yarrowia lipolytica CLIB122]
Length = 85
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 44/54 (81%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
QR+M PI ++F+FLQ A +Q+WLFEQ D RI+G ++GFDE+MN+VL+DA ++
Sbjct: 7 QRVMLVPIKVLFKFLQLHATVQVWLFEQSDTRIQGTLVGFDEFMNVVLEDAIQI 60
>gi|396458899|ref|XP_003834062.1| similar to small nuclear ribonucleoprotein E [Leptosphaeria
maculans JN3]
gi|312210611|emb|CBX90697.1| similar to small nuclear ribonucleoprotein E [Leptosphaeria
maculans JN3]
Length = 94
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+++ PIN IF+ LQS+A I +WL+E LRIEG++ GFDE+MNLV+DDA EV + K
Sbjct: 11 KVLLPPINFIFKLLQSRATISVWLYENLGLRIEGKLRGFDEFMNLVIDDAVEVTLAK 67
>gi|344299952|gb|EGW30292.1| hypothetical protein SPAPADRAFT_63138 [Spathaspora passalidarum
NRRL Y-27907]
Length = 87
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S+K ++ PINLIF+FLQ ++++ IWL+EQ RI+G+I GFDE+MN+V+DDA E+
Sbjct: 2 SSKQKKATLPPINLIFKFLQHQSQVTIWLYEQTQSRIQGKIRGFDEFMNIVIDDAVEIST 61
Query: 63 KKNTRKPLG 71
+ LG
Sbjct: 62 VTGRKDELG 70
>gi|167379643|ref|XP_001735222.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902891|gb|EDR28600.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 84
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
+ M P+ I + K R+ IWLFE LRIEG + GFD+Y+NLVL D EEV++K NTR
Sbjct: 3 KAMILPVKFIVNLAKHKQRVSIWLFENTALRIEGTLSGFDQYINLVLTDTEEVYLKTNTR 62
Query: 68 KPLG 71
+ +G
Sbjct: 63 RKIG 66
>gi|380479557|emb|CCF42948.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 96
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV-HIKKNT- 66
++ PIN IF+ LQ +QIWL+EQ +RIEG+I GFDE+MNLV+DDA EV I K
Sbjct: 12 VLLPPINFIFKLLQQHTTVQIWLYEQLSIRIEGKIRGFDEFMNLVIDDAVEVKQITKTNL 71
Query: 67 ---RKPLG 71
R PLG
Sbjct: 72 EEKRTPLG 79
>gi|317139460|ref|XP_003189167.1| small nuclear ribonucleoprotein E [Aspergillus oryzae RIB40]
Length = 95
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT- 66
+ + PI+ IF+ LQ ++ + IWL+EQ RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 12 KTLLAPIHFIFKLLQQRSTVSIWLYEQLAFRIEGKIRGFDEFMNLVVDDAVEVRLATKTG 71
Query: 67 ---RKPLG 71
R+PLG
Sbjct: 72 EEKRRPLG 79
>gi|115399850|ref|XP_001215514.1| small nuclear ribonucleoprotein E [Aspergillus terreus NIH2624]
gi|114191180|gb|EAU32880.1| small nuclear ribonucleoprotein E [Aspergillus terreus NIH2624]
Length = 94
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
++ + PI+ IF+ LQ ++ + IWL+EQ RIEG+I GFDE+MNLV+DDA EV
Sbjct: 5 GGGAARKTLLAPIHFIFKLLQQRSTVSIWLYEQLAFRIEGKIRGFDEFMNLVVDDAVEVR 64
Query: 62 IKKNT----RKPLG 71
+ T R+PLG
Sbjct: 65 MATKTDEEKRRPLG 78
>gi|67541130|ref|XP_664339.1| hypothetical protein AN6735.2 [Aspergillus nidulans FGSC A4]
gi|40739363|gb|EAA58553.1| hypothetical protein AN6735.2 [Aspergillus nidulans FGSC A4]
Length = 91
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
++ + PI+ IF+ LQ ++ + IWL+EQ RIEG+I GFDE+MNLV+DDA EV
Sbjct: 5 GGGAARKTLLAPIHFIFKLLQQRSTVSIWLYEQLAFRIEGKIRGFDEFMNLVIDDAVEVR 64
Query: 62 IKKNT----RKPLG 71
+ + R+PLG
Sbjct: 65 LATKSEEEKRRPLG 78
>gi|238482745|ref|XP_002372611.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus flavus
NRRL3357]
gi|220700661|gb|EED56999.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus flavus
NRRL3357]
Length = 95
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT- 66
+ + PI+ IF+ LQ ++ + IWL+EQ RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 12 KTLLAPIHFIFKLLQQRSTVSIWLYEQLAFRIEGKIRGFDEFMNLVVDDAVEVRLATKTE 71
Query: 67 ---RKPLG 71
R+PLG
Sbjct: 72 EEKRRPLG 79
>gi|190346690|gb|EDK38837.2| hypothetical protein PGUG_02935 [Meyerozyma guilliermondii ATCC
6260]
Length = 84
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKP 69
M PIN+IF+FLQ + + IWL+EQ +I+GRI GFDE+MN+V+DDA V I K++ P
Sbjct: 8 MLPPINVIFKFLQQQVPVTIWLYEQTQSKIQGRIRGFDEFMNIVIDDA--VEILKDSEVP 65
Query: 70 LG 71
LG
Sbjct: 66 LG 67
>gi|406866709|gb|EKD19748.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 95
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV----HI 62
++++ PIN IF+ LQ ++ +QIWL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 10 RKVLLPPINFIFKLLQQRSTVQIWLYEQLAIRIEGKIRGFDEFMNLVIDDAVEVKQATKT 69
Query: 63 KKNTRKPLG 71
+R+ LG
Sbjct: 70 SAESRRDLG 78
>gi|255943851|ref|XP_002562693.1| Pc20g01340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587428|emb|CAP85463.1| Pc20g01340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 100
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
++ + PI+ IF LQ ++ + IWL+EQ RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 17 RKTLLAPIHFIFSLLQKRSTVSIWLYEQLAFRIEGKIRGFDEFMNLVIDDAVEVRLATKT 76
Query: 67 ----RKPLG 71
R+PLG
Sbjct: 77 EEEKRRPLG 85
>gi|345568747|gb|EGX51639.1| hypothetical protein AOL_s00054g38 [Arthrobotrys oligospora ATCC
24927]
Length = 98
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI----KK 64
++ PIN IF+ LQ+ A +QIWL+EQ RIEG+I GFDE+MNLV+D+A E+ + +
Sbjct: 14 VLLPPINFIFKLLQTHATVQIWLYEQLQTRIEGKIRGFDEFMNLVIDEAVEIKLPSKTED 73
Query: 65 NTRKPLG 71
TR+ LG
Sbjct: 74 ETRRELG 80
>gi|403214323|emb|CCK68824.1| hypothetical protein KNAG_0B03830 [Kazachstania naganishii CBS
8797]
Length = 90
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
PIN IF +LQ++ + IWLFEQ RI G+I GFDE+MN+V+D+AEEV + K T + +G
Sbjct: 7 PINCIFNYLQNETSVTIWLFEQVSYRIRGKIRGFDEFMNVVVDEAEEVPLDKATGREIG 65
>gi|340508793|gb|EGR34424.1| monoglyceride lipase, putative [Ichthyophthirius multifiliis]
Length = 322
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI--IGFDEYMNLVLDDAEEV 60
S K + +T P+ IF FLQ R+QIWL+E DL++EG+I IGFDEYMN+V+D+A EV
Sbjct: 2 SKKFTKTITNPLTTIFGFLQKSVRVQIWLYENTDLKLEGKIVVIGFDEYMNMVIDEAIEV 61
Query: 61 HIKK 64
+ K
Sbjct: 62 YKSK 65
>gi|398365473|ref|NP_014802.3| Sme1p [Saccharomyces cerevisiae S288c]
gi|2500647|sp|Q12330.1|RUXE_YEAST RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|1293719|gb|AAC49645.1| similar to the mammalian snRNP-E involved in splicing, CAI: 0.12;
snRNPE homolog [Saccharomyces cerevisiae]
gi|1420395|emb|CAA99365.1| SME1 [Saccharomyces cerevisiae]
gi|1694906|emb|CAA63198.1| core snRNP protein E [Saccharomyces cerevisiae]
gi|45269948|gb|AAS56355.1| YOR159C [Saccharomyces cerevisiae]
gi|151945777|gb|EDN64018.1| Sm E [Saccharomyces cerevisiae YJM789]
gi|190407477|gb|EDV10744.1| small nuclear ribonucleoprotein E [Saccharomyces cerevisiae
RM11-1a]
gi|256272778|gb|EEU07749.1| Sme1p [Saccharomyces cerevisiae JAY291]
gi|259149642|emb|CAY86446.1| Sme1p [Saccharomyces cerevisiae EC1118]
gi|285815039|tpg|DAA10932.1| TPA: Sme1p [Saccharomyces cerevisiae S288c]
gi|349581316|dbj|GAA26474.1| K7_Sme1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296487|gb|EIW07589.1| Sme1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 94
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 8/77 (10%)
Query: 3 STKVQ-RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
S KV+ + M PIN IF FLQ + + IWLFEQ +RI+G+I+GFDE+MN+V+D+A E+
Sbjct: 2 SNKVKTKAMVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIP 61
Query: 62 IKKNTRK-------PLG 71
+ K PLG
Sbjct: 62 VNSADGKEDVEKGTPLG 78
>gi|189210563|ref|XP_001941613.1| small nuclear ribonucleoprotein E [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923223|ref|XP_003300153.1| hypothetical protein PTT_11315 [Pyrenophora teres f. teres 0-1]
gi|187977706|gb|EDU44332.1| small nuclear ribonucleoprotein E [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325858|gb|EFQ91754.1| hypothetical protein PTT_11315 [Pyrenophora teres f. teres 0-1]
Length = 93
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+++ PIN IF+ LQS+A I +WL+E +RIEG++ GFDE+MNLV+DDA EV + K
Sbjct: 11 KVLLPPINFIFKLLQSRATISVWLYENLGMRIEGKLRGFDEFMNLVIDDAIEVKLAK 67
>gi|259480327|tpe|CBF71356.1| TPA: small nuclear ribonucleoprotein SmE, putative
(AFU_orthologue; AFUA_7G05980) [Aspergillus nidulans
FGSC A4]
Length = 94
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
++ + PI+ IF+ LQ ++ + IWL+EQ RIEG+I GFDE+MNLV+DDA EV
Sbjct: 5 GGGAARKTLLAPIHFIFKLLQQRSTVSIWLYEQLAFRIEGKIRGFDEFMNLVIDDAVEVR 64
Query: 62 IKKNT----RKPLG 71
+ + R+PLG
Sbjct: 65 LATKSEEEKRRPLG 78
>gi|451995795|gb|EMD88263.1| hypothetical protein COCHEDRAFT_15041 [Cochliobolus
heterostrophus C5]
Length = 92
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+++ PIN IF+ LQS+A I +WL+E +RIEG++ GFDE+MNLV+DDA EV + K
Sbjct: 9 KVLLPPINFIFKLLQSRATISVWLYENLGMRIEGKLRGFDEFMNLVIDDAIEVTLAK 65
>gi|344231123|gb|EGV63005.1| LSM-domain-containing protein [Candida tenuis ATCC 10573]
Length = 90
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
R M PI+ IF LQ + + +WL+EQ RIEG+I GFDE+MN+VLDDA EV K +
Sbjct: 9 NRAMHTPIHTIFTCLQQRLTVSVWLYEQTQSRIEGKIRGFDEFMNIVLDDAIEVSTKDGS 68
Query: 67 RKPLG 71
++ LG
Sbjct: 69 KEDLG 73
>gi|119483034|ref|XP_001261545.1| LSM domain protein [Neosartorya fischeri NRRL 181]
gi|119409700|gb|EAW19648.1| LSM domain protein [Neosartorya fischeri NRRL 181]
Length = 95
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT- 66
+ + PI+ IF+ LQ + + IWL+EQ RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 12 KTLLAPIHFIFKLLQQRTTVSIWLYEQLAFRIEGKIRGFDEFMNLVIDDAVEVRMATKTD 71
Query: 67 ---RKPLG 71
R+PLG
Sbjct: 72 EEKRRPLG 79
>gi|392574635|gb|EIW67771.1| hypothetical protein TREMEDRAFT_69713 [Tremella mesenterica DSM
1558]
Length = 93
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
+++ QPIN+IF LQ RI IWL++ + RIE I+GFDE+MNLVLD+AEEV+
Sbjct: 4 RKVAVQPINVIFSHLQKHTRITIWLYDSNEFRIEAFIVGFDEFMNLVLDEAEEVY 58
>gi|70986850|ref|XP_748912.1| small nuclear ribonucleoprotein SmE [Aspergillus fumigatus Af293]
gi|66846542|gb|EAL86874.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus
fumigatus Af293]
gi|159123319|gb|EDP48439.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus
fumigatus A1163]
Length = 95
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT- 66
+ + PI+ IF+ LQ + + IWL+EQ RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 12 KTLLAPIHFIFKLLQQRTTVSIWLYEQLAFRIEGKIRGFDEFMNLVIDDAVEVKMATKTD 71
Query: 67 ---RKPLG 71
R+PLG
Sbjct: 72 EEKRRPLG 79
>gi|121711637|ref|XP_001273434.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus
clavatus NRRL 1]
gi|119401585|gb|EAW12008.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus
clavatus NRRL 1]
Length = 95
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT- 66
+ + PI+ IF+ LQ + + IWL+EQ RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 12 KTLLAPIHFIFKLLQQRTTVSIWLYEQLAFRIEGKIRGFDEFMNLVVDDAVEVRMATKTD 71
Query: 67 ---RKPLG 71
R+PLG
Sbjct: 72 EEKRRPLG 79
>gi|347838352|emb|CCD52924.1| similar to small nuclear ribonucleoprotein e [Botryotinia
fuckeliana]
Length = 94
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH----I 62
++++ PIN IF+ LQ + IWL+EQ +RIEG+I GFDE+MNLVLDDA EV
Sbjct: 9 RKVLLPPINFIFKLLQQHTPVSIWLYEQLGIRIEGKIRGFDEFMNLVLDDAVEVRQATKD 68
Query: 63 KKNTRKPLG 71
K+ +R+ LG
Sbjct: 69 KEESRRALG 77
>gi|310798264|gb|EFQ33157.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 96
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
++ PIN IF+ LQ + +QIWL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 12 VLLPPINFIFKLLQQHSTVQIWLYEQLSIRIEGKIRGFDEFMNLVIDDAVEV 63
>gi|169620926|ref|XP_001803874.1| hypothetical protein SNOG_13667 [Phaeosphaeria nodorum SN15]
gi|111057994|gb|EAT79114.1| hypothetical protein SNOG_13667 [Phaeosphaeria nodorum SN15]
Length = 97
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
+++ PIN IF+ LQS+A I +WL+E +RIEG++ GFDE+MNLV+DDA EV + N +
Sbjct: 12 KVLLPPINFIFKLLQSRATISVWLYENLGMRIEGKLRGFDEFMNLVIDDAVEVTL-ANAK 70
Query: 68 K 68
K
Sbjct: 71 K 71
>gi|156045543|ref|XP_001589327.1| hypothetical protein SS1G_09962 [Sclerotinia sclerotiorum 1980]
gi|154694355|gb|EDN94093.1| hypothetical protein SS1G_09962 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 94
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV----HI 62
++++ PIN IF+ LQ + IWL+EQ +RIEG+I GFDE+MNLVLDDA EV
Sbjct: 9 RKVLLPPINFIFKLLQQHTPVSIWLYEQLGIRIEGKIRGFDEFMNLVLDDAVEVKQATKD 68
Query: 63 KKNTRKPLG 71
K +R+ LG
Sbjct: 69 KAESRRALG 77
>gi|453085619|gb|EMF13662.1| LSM-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 99
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 42/54 (77%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
+++ PIN IF+ LQ + +QIWL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 11 KVLLPPINFIFKLLQQHSTVQIWLYEQLGIRIEGKIRGFDEFMNLVIDDAVEVQ 64
>gi|145237192|ref|XP_001391243.1| small nuclear ribonucleoprotein E [Aspergillus niger CBS 513.88]
gi|134075709|emb|CAK96601.1| unnamed protein product [Aspergillus niger]
gi|350635406|gb|EHA23767.1| hypothetical protein ASPNIDRAFT_40173 [Aspergillus niger ATCC
1015]
gi|358369432|dbj|GAA86046.1| small nuclear ribonucleoprotein SmE [Aspergillus kawachii IFO
4308]
Length = 95
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT- 66
+ + PI+ IF+ LQ ++ + IWL+EQ RIEG+I GFDE+MNLV+DDA EV + +
Sbjct: 12 KTLLAPIHFIFKLLQQRSTVSIWLYEQLAFRIEGKIRGFDEFMNLVIDDAVEVRMATKSE 71
Query: 67 ---RKPLG 71
R+PLG
Sbjct: 72 EEKRRPLG 79
>gi|452980005|gb|EME79767.1| hypothetical protein MYCFIDRAFT_81234 [Pseudocercospora fijiensis
CIRAD86]
Length = 100
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
++++ PIN IF+ LQ + +QIWL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 11 RKVLLPPINFIFKLLQQHSTVQIWLYEQLGIRIEGKIRGFDEFMNLVIDDAVEV 64
>gi|296817973|ref|XP_002849323.1| LSM domain-containing protein [Arthroderma otae CBS 113480]
gi|238839776|gb|EEQ29438.1| LSM domain-containing protein [Arthroderma otae CBS 113480]
Length = 95
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT- 66
+ + PI+ IF+ LQ +A + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 11 KTLLAPIHFIFKLLQQRATVSIWLYEQLAVRIEGKIRGFDEFMNLVVDDAVEVTLATKTE 70
Query: 67 ---RKPLG 71
R+ LG
Sbjct: 71 AESRRQLG 78
>gi|366996280|ref|XP_003677903.1| hypothetical protein NCAS_0H02460 [Naumovozyma castellii CBS
4309]
gi|342303773|emb|CCC71556.1| hypothetical protein NCAS_0H02460 [Naumovozyma castellii CBS
4309]
Length = 92
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
+ M PIN IF FLQ + + WLFEQ RI G++ GFDE+MN+V+DDA E+ + T
Sbjct: 5 SKTMVPPINCIFNFLQQQTTVTFWLFEQVGTRIRGKVSGFDEFMNVVIDDAIEIPVDAKT 64
Query: 67 RKPL 70
K L
Sbjct: 65 GKEL 68
>gi|449297252|gb|EMC93270.1| hypothetical protein BAUCODRAFT_76081 [Baudoinia compniacensis
UAMH 10762]
Length = 97
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 43/53 (81%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
+++ PIN IF+ LQ ++ +QIWL+EQ +RIEG+I GFDE+MNLV+D+A EV
Sbjct: 11 KVLLPPINFIFKLLQQRSTVQIWLYEQLGIRIEGKIRGFDEFMNLVIDEAVEV 63
>gi|241956256|ref|XP_002420848.1| small nuclear ribonucleoprotein E (snRNP-E), putative [Candida
dubliniensis CD36]
gi|223644191|emb|CAX41000.1| small nuclear ribonucleoprotein E (snRNP-E), putative [Candida
dubliniensis CD36]
Length = 86
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+S + ++ PINLIF+FLQ ++ + IWL+EQ RI+G+I GFDE+MN+V+DDA E+
Sbjct: 1 MSSKQTKQTNLPPINLIFKFLQQQSVVTIWLYEQTQSRIQGKIRGFDEFMNIVIDDAVEL 60
Query: 61 HIKKNT 66
K +
Sbjct: 61 SNGKKS 66
>gi|401840391|gb|EJT43229.1| SME1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 85
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
M PIN IF +LQ + + IWLFEQ +RI G+I+GFDE+MN+V+D+A EV + K
Sbjct: 1 MVPPINCIFNYLQQQTPVTIWLFEQVGIRIRGKIVGFDEFMNVVIDEAVEVPVNSTDGK 59
>gi|255717787|ref|XP_002555174.1| KLTH0G03102p [Lachancea thermotolerans]
gi|238936558|emb|CAR24737.1| KLTH0G03102p [Lachancea thermotolerans CBS 6340]
Length = 94
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
++ PIN IF FLQ + + WLFEQ RI GRI GFDE+MN+V+DDA E+ I T
Sbjct: 7 KVTVPPINCIFNFLQQQTLVNFWLFEQVQTRIRGRISGFDEFMNVVIDDASEIPIDTKT 65
>gi|303310042|ref|XP_003065034.1| Small nuclear ribonucleoprotein E , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240104693|gb|EER22889.1| Small nuclear ribonucleoprotein E , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320033257|gb|EFW15206.1| hypothetical protein CPSG_08394 [Coccidioides posadasii str.
Silveira]
gi|392867032|gb|EAS29780.2| LSM domain-containing protein [Coccidioides immitis RS]
Length = 94
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 4/68 (5%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI----K 63
+ + QPI+ IF+ LQ ++ + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV + +
Sbjct: 11 KTLLQPIHFIFKLLQQRSTVSIWLYEQLAVRIEGKIRGFDEFMNLVIDDAVEVRVPTKDQ 70
Query: 64 KNTRKPLG 71
+ R+ LG
Sbjct: 71 EEQRRQLG 78
>gi|342874544|gb|EGU76546.1| hypothetical protein FOXB_12920 [Fusarium oxysporum Fo5176]
gi|388497428|gb|AFK36780.1| unknown [Lotus japonicus]
Length = 96
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-----IK 63
+M PI IF L+ A + IWL+EQ +RIEG+I GFDE+MNLV+D+A EV +
Sbjct: 12 LMLPPIKYIFELLREHATVSIWLYEQLSIRIEGKIRGFDEFMNLVIDEAVEVKQVTKTNE 71
Query: 64 KNTRKPLG 71
K TR+PLG
Sbjct: 72 KETRRPLG 79
>gi|255727532|ref|XP_002548692.1| small nuclear ribonucleoprotein E [Candida tropicalis MYA-3404]
gi|240134616|gb|EER34171.1| small nuclear ribonucleoprotein E [Candida tropicalis MYA-3404]
Length = 86
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+S + ++ PINLIF+FLQ ++ + IWL+EQ RI+G+I GFDE+MN+V+DDA V
Sbjct: 1 MSSKQGKQSNLPPINLIFKFLQQQSLVNIWLYEQTQSRIQGKIRGFDEFMNIVIDDA--V 58
Query: 61 HIKKNTRKPLG 71
I ++ LG
Sbjct: 59 EICNGNKEELG 69
>gi|380800507|gb|AFE72129.1| small nuclear ribonucleoprotein E, partial [Macaca mulatta]
Length = 59
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 30 WLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LG
Sbjct: 1 WLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLG 42
>gi|452842154|gb|EME44090.1| hypothetical protein DOTSEDRAFT_130967 [Dothistroma septosporum
NZE10]
Length = 99
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
+++ PIN IF+ LQ +QIWL+EQ +RIEG+I GFDE+MNLV+DDA EV
Sbjct: 11 KVLLPPINFIFKLLQQHNTVQIWLYEQLGIRIEGKIRGFDEFMNLVIDDAVEV 63
>gi|119178728|ref|XP_001241003.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 91
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 8/78 (10%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI----K 63
+ + QPI+ IF+ LQ ++ + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV + +
Sbjct: 11 KTLLQPIHFIFKLLQQRSTVSIWLYEQLAVRIEGKIRGFDEFMNLVIDDAVEVRVPTKDQ 70
Query: 64 KNTRKPL----GFFSKET 77
+ R+ L F+SK T
Sbjct: 71 EEQRRQLVLQARFYSKAT 88
>gi|363753610|ref|XP_003647021.1| hypothetical protein Ecym_5455 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890657|gb|AET40204.1| hypothetical protein Ecym_5455 [Eremothecium cymbalariae
DBVPG#7215]
Length = 93
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S K Q+ M PIN I+ LQ ++ ++ WL++Q +RI+G+I GFDE+MN+V+DDA E+ I
Sbjct: 2 SGKQQKTMMPPINCIYSHLQQQSTVKFWLYQQSQMRIKGKISGFDEFMNVVIDDALELPI 61
Query: 63 KKNTRKPL 70
+ T L
Sbjct: 62 DEKTGAEL 69
>gi|261204379|ref|XP_002629403.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis
SLH14081]
gi|239587188|gb|EEQ69831.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis
SLH14081]
gi|239614272|gb|EEQ91259.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis ER-3]
gi|327356357|gb|EGE85214.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis ATCC
18188]
Length = 94
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
++ + PI+ IF+ LQ ++ + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 10 RKTLLAPIHFIFKLLQQRSTVSIWLYEQLAIRIEGKIRGFDEFMNLVVDDAVEVRLATKT 69
Query: 67 ----RKPLG 71
R+ LG
Sbjct: 70 EEEKRRQLG 78
>gi|45184940|ref|NP_982658.1| AAR116Wp [Ashbya gossypii ATCC 10895]
gi|44980549|gb|AAS50482.1| AAR116Wp [Ashbya gossypii ATCC 10895]
gi|374105858|gb|AEY94769.1| FAAR116Wp [Ashbya gossypii FDAG1]
Length = 97
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
S K Q+ M PIN I+ +LQ + + WLF+Q +RI+GRI GFDE+MN+V+D+A EV +
Sbjct: 2 SGKQQKPMMPPINCIYNYLQQQTTVTFWLFQQTQMRIKGRISGFDEFMNVVVDEAVEVPV 61
Query: 63 KKNT 66
+ +
Sbjct: 62 DEKS 65
>gi|225559154|gb|EEH07437.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|240282077|gb|EER45580.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325088218|gb|EGC41528.1| small nuclear ribonucleoprotein E [Ajellomyces capsulatus H88]
Length = 113
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
++ + PI+ IF+ LQ ++ + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 10 RKTLLAPIHFIFKLLQQRSVVSIWLYEQLAIRIEGKIRGFDEFMNLVVDDAVEVRLATKT 69
Query: 67 ----RKPLG 71
R+ LG
Sbjct: 70 EDEKRRQLG 78
>gi|365984381|ref|XP_003669023.1| hypothetical protein NDAI_0C01190 [Naumovozyma dairenensis CBS
421]
gi|343767791|emb|CCD23780.1| hypothetical protein NDAI_0C01190 [Naumovozyma dairenensis CBS
421]
Length = 94
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+S + M PIN IF +LQ + + WL+EQ +RI G+I GFDE+MN+V+DDA E+
Sbjct: 1 MSSRTKSKAMVPPINCIFGYLQQQTPVTFWLYEQVGIRITGKISGFDEFMNVVIDDAIEI 60
Query: 61 HIKKNT 66
+ T
Sbjct: 61 PVDPKT 66
>gi|315041917|ref|XP_003170335.1| LSM domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311345369|gb|EFR04572.1| LSM domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 95
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT- 66
+ + PI+ IF+ LQ + + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 11 KTLLAPIHFIFKLLQQRTTVSIWLYEQLAVRIEGKIRGFDEFMNLVVDDAVEVKLATKTE 70
Query: 67 ---RKPLG 71
R+ LG
Sbjct: 71 AESRRQLG 78
>gi|398397489|ref|XP_003852202.1| hypothetical protein MYCGRDRAFT_104520 [Zymoseptoria tritici
IPO323]
gi|339472083|gb|EGP87178.1| hypothetical protein MYCGRDRAFT_104520 [Zymoseptoria tritici
IPO323]
Length = 99
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
+++ PIN IF+ LQ + +QIWL+EQ +RIEG+I GFDE+MNLV+D+A EV
Sbjct: 11 KVLLPPINFIFKLLQQHSTVQIWLYEQLGIRIEGKIRGFDEFMNLVIDEAVEV 63
>gi|327298737|ref|XP_003234062.1| small nuclear ribonucleoprotein E [Trichophyton rubrum CBS
118892]
gi|326464240|gb|EGD89693.1| small nuclear ribonucleoprotein E [Trichophyton rubrum CBS
118892]
gi|326472547|gb|EGD96556.1| small nuclear ribonucleoprotein SmE [Trichophyton tonsurans CBS
112818]
gi|326484188|gb|EGE08198.1| small nuclear ribonucleoprotein SmE [Trichophyton equinum CBS
127.97]
Length = 95
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT- 66
+ + PI+ IF+ LQ + + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 11 KTLLAPIHFIFKLLQQRTTVSIWLYEQLAVRIEGKIRGFDEFMNLVVDDAVEVKLATKTE 70
Query: 67 ---RKPLG 71
R+ LG
Sbjct: 71 EESRRQLG 78
>gi|367053583|ref|XP_003657170.1| hypothetical protein THITE_2122649 [Thielavia terrestris NRRL
8126]
gi|347004435|gb|AEO70834.1| hypothetical protein THITE_2122649 [Thielavia terrestris NRRL
8126]
Length = 90
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
A+ +R++ PIN +FR LQ ++ +QIWL+EQ +RI G I GFDE+MNLV+ + +
Sbjct: 5 AAGGGRRVLLPPINFLFRLLQQRSTVQIWLYEQLSIRIVGTIRGFDEFMNLVVKQISKTN 64
Query: 62 IKKNTRKPLG 71
TR+PLG
Sbjct: 65 -DTETRRPLG 73
>gi|225679918|gb|EEH18202.1| hypothetical protein PABG_00765 [Paracoccidioides brasiliensis
Pb03]
gi|226291688|gb|EEH47116.1| hypothetical protein PADG_03214 [Paracoccidioides brasiliensis
Pb18]
Length = 94
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
+ + PI+ IF+ LQ ++ + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 11 KTLLAPIHFIFKLLQQRSVVSIWLYEQLAIRIEGKIRGFDEFMNLVVDDAVEVRLATKT 69
>gi|212543921|ref|XP_002152115.1| small nuclear ribonucleoprotein SmE, putative [Talaromyces
marneffei ATCC 18224]
gi|242787996|ref|XP_002481132.1| small nuclear ribonucleoprotein SmE, putative [Talaromyces
stipitatus ATCC 10500]
gi|210067022|gb|EEA21115.1| small nuclear ribonucleoprotein SmE, putative [Talaromyces
marneffei ATCC 18224]
gi|218721279|gb|EED20698.1| small nuclear ribonucleoprotein SmE, putative [Talaromyces
stipitatus ATCC 10500]
Length = 94
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
++ + PI+ IF+ LQ ++ + IWL+EQ RIEG+I GFDE+MNLV+DDA EV + +
Sbjct: 10 RKTLLAPIHFIFKLLQQRSTVSIWLYEQLSFRIEGKIRGFDEFMNLVVDDAVEVRLATKS 69
Query: 67 ----RKPLG 71
R+ LG
Sbjct: 70 EEEKRRNLG 78
>gi|295667135|ref|XP_002794117.1| hypothetical protein PAAG_03710 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286223|gb|EEH41789.1| hypothetical protein PAAG_03710 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 155
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
+ + PI+ IF+ LQ ++ + IWL+EQ +RIEG+I GFDE+MNLV+DDA EV + T
Sbjct: 72 KTLLAPIHFIFKLLQQRSVVSIWLYEQLAIRIEGKIRGFDEFMNLVVDDAVEVRLATKT 130
>gi|50302335|ref|XP_451102.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640233|emb|CAH02690.1| KLLA0A02299p [Kluyveromyces lactis]
Length = 93
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+ +KV M PIN I+ +L + + WL+EQ RI G+I GFDE+MN+V+DDA E+
Sbjct: 1 MSGSKVGAPMVPPINCIYNYLHHQTTVTFWLYEQVQTRIRGKIRGFDEFMNVVIDDAFEI 60
Query: 61 HIKKNTRK 68
+ + K
Sbjct: 61 AVDPKSGK 68
>gi|156836424|ref|XP_001642276.1| hypothetical protein Kpol_218p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156112763|gb|EDO14418.1| hypothetical protein Kpol_218p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
+ M PIN IF +LQ + + WL+EQ +RI G+I GFDE+MN+V+DDA EV + T
Sbjct: 5 SKAMMPPINCIFNYLQQQTLVTFWLYEQVGIRIRGKIAGFDEFMNVVIDDALEVPVDVKT 64
Query: 67 RK 68
K
Sbjct: 65 GK 66
>gi|425766459|gb|EKV05069.1| Small nuclear ribonucleoprotein SmE, putative [Penicillium
digitatum PHI26]
gi|425781600|gb|EKV19555.1| Small nuclear ribonucleoprotein SmE, putative [Penicillium
digitatum Pd1]
Length = 87
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
++ + PI+ IF FLQ + + +WL+EQ RIEG I GFDE+MNLV+++A EV + T
Sbjct: 4 RKTLLAPIHCIFGFLQKRIPVSVWLYEQLAFRIEGTIRGFDEFMNLVIENAVEVRLATKT 63
Query: 67 ----RKPLG 71
R+PLG
Sbjct: 64 EEEKRRPLG 72
>gi|367008820|ref|XP_003678911.1| hypothetical protein TDEL_0A03680 [Torulaspora delbrueckii]
gi|359746568|emb|CCE89700.1| hypothetical protein TDEL_0A03680 [Torulaspora delbrueckii]
Length = 93
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
+ M PIN IF +LQ + + WLFEQ +RI G+I GFDE+MN+V+DDA E+ + T
Sbjct: 5 SKAMVPPINCIFDYLQQQTLVTFWLFEQVGIRIRGKISGFDEFMNVVIDDALEIPVDPKT 64
>gi|410078143|ref|XP_003956653.1| hypothetical protein KAFR_0C05270 [Kazachstania africana CBS
2517]
gi|372463237|emb|CCF57518.1| hypothetical protein KAFR_0C05270 [Kazachstania africana CBS
2517]
Length = 94
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
ST + PIN IF +LQ + + WL+EQ +RI G+I GFDE+MN+V+DDA E+ +
Sbjct: 2 STSKPKAHVPPINCIFNYLQQQVPVTFWLYEQVGIRIRGKIRGFDEFMNIVIDDAVEIPV 61
Query: 63 KKNT 66
T
Sbjct: 62 DSTT 65
>gi|336270688|ref|XP_003350103.1| hypothetical protein SMAC_00994 [Sordaria macrospora k-hell]
gi|380095497|emb|CCC06970.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 96
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI-----K 63
++ PIN +FR LQ + +QIWL+EQ +RI G I GFDE+MNLV+D+A EV + +
Sbjct: 12 VLLPPINFLFRLLQQHSTVQIWLYEQLHIRIIGTIRGFDEFMNLVIDNAIEVKLVSKTNE 71
Query: 64 KNTRKPLG 71
K R+ LG
Sbjct: 72 KEERRELG 79
>gi|85107508|ref|XP_962388.1| hypothetical protein NCU06354 [Neurospora crassa OR74A]
gi|28923993|gb|EAA33152.1| predicted protein [Neurospora crassa OR74A]
Length = 96
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT-- 66
++ PIN +FR LQ + +QIWL+EQ +RI G I GFDE+MNLV+D+A EV + T
Sbjct: 12 VLLPPINFLFRLLQQHSTVQIWLYEQLHIRIIGTIRGFDEFMNLVIDNAIEVKLVSKTNE 71
Query: 67 ---RKPLG 71
R+ LG
Sbjct: 72 TEERRELG 79
>gi|385302463|gb|EIF46594.1| small nuclear ribonucleoprotein e [Dekkera bruxellensis AWRI1499]
Length = 79
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
M PIN IF++LQ ++++ IWL+EQ ++R+ G + GFDE+MN+VLDDA E+
Sbjct: 1 MVPPINQIFKYLQQQSKVTIWLYEQVNVRLTGVLKGFDEFMNVVLDDAVEIS 52
>gi|440297058|gb|ELP89788.1| hypothetical protein EIN_425100 [Entamoeba invadens IP1]
Length = 85
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
+ +R M P+ +++K ++ IWL+E ++IEGRI FD YMN+ L+ AEEV++K
Sbjct: 4 RAKRAMLAPVRYYADLIRNKQKVTIWLYENTAMKIEGRITAFDTYMNITLEQAEEVYVKT 63
Query: 65 NTRKPLG 71
+ R+ +G
Sbjct: 64 SNRRSIG 70
>gi|254581938|ref|XP_002496954.1| ZYRO0D11968p [Zygosaccharomyces rouxii]
gi|238939846|emb|CAR28021.1| ZYRO0D11968p [Zygosaccharomyces rouxii]
Length = 93
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
PIN IF FLQ + + WLFEQ RI G+I GFDE+MN+V++DA E+ + T K
Sbjct: 11 PINCIFGFLQQQTVVTFWLFEQLGTRIRGKISGFDEFMNVVIEDATEIPVDPQTGK 66
>gi|123468440|ref|XP_001317438.1| Sm protein [Trichomonas vaginalis G3]
gi|121900172|gb|EAY05215.1| Sm protein [Trichomonas vaginalis G3]
Length = 93
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
++ P+ + +L+ +AR+++ L + + +EG ++GFDEYMNLVL D+ EV+ K+NTR
Sbjct: 10 HLLEPPLKIYVSYLKERARLRVHLNDNSKMYMEGNLLGFDEYMNLVLGDSYEVYPKENTR 69
Query: 68 KPLG 71
PLG
Sbjct: 70 VPLG 73
>gi|442758563|gb|JAA71440.1| Putative small nuclear ribonucleoprotein e [Ixodes ricinus]
Length = 82
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 10 MTQPINLIFRFL-QSKARIQ-IWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
M Q INL F+ +++ARI+ L+E LRIEG IIGF EYMNLVLDDAEE++ K R
Sbjct: 1 MVQTINLYFQISNRTRARIRRFGLYENVILRIEGHIIGFGEYMNLVLDDAEEIYTKTKQR 60
Query: 68 KPLG 71
K +G
Sbjct: 61 KQVG 64
>gi|444314665|ref|XP_004177990.1| hypothetical protein TBLA_0A06790 [Tetrapisispora blattae CBS
6284]
gi|387511029|emb|CCH58471.1| hypothetical protein TBLA_0A06790 [Tetrapisispora blattae CBS
6284]
Length = 91
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
+ PINLIF +L+ ++ I++WL+E RI+G+I GFDE+MNLV+D+A E+ I T
Sbjct: 7 LIPPINLIFNYLEKQSTIKVWLYENTHSRIQGKISGFDEFMNLVIDNAIEIPIDNVT 63
>gi|145492122|ref|XP_001432059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145499004|ref|XP_001435488.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399168|emb|CAK64662.1| unnamed protein product [Paramecium tetraurelia]
gi|124402621|emb|CAK68091.1| unnamed protein product [Paramecium tetraurelia]
Length = 95
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
K Q+ +TQP++ F K +++IWL E +LRI+G++ GFDEY+NLVLD A E K
Sbjct: 9 KPQKKITQPLHAFFTLFTEKTQLEIWLVENDNLRIQGKLAGFDEYLNLVLDRAVEYDRKT 68
Query: 65 NTRKPLG 71
K LG
Sbjct: 69 KATKELG 75
>gi|408993|gb|AAC60592.1| fusion protein [Homo sapiens]
gi|737057|prf||1921318A B-raf oncogene
Length = 104
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 37/40 (92%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII 44
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG II
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCII 48
>gi|401885285|gb|EJT49407.1| small nuclear ribonucleoprotein E [Trichosporon asahii var.
asahii CBS 2479]
gi|406694808|gb|EKC98129.1| small nuclear ribonucleoprotein E [Trichosporon asahii var.
asahii CBS 8904]
Length = 118
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 13/68 (19%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-------------GFDEYMNLV 53
+++M QPIN++F FLQ R+QIWL++ + R+E II GFDE+MN+V
Sbjct: 4 RKVMVQPINILFSFLQKHQRVQIWLYDNNEFRLEAFIIVGLTLRGQRADGQGFDEFMNVV 63
Query: 54 LDDAEEVH 61
LD+ EEV+
Sbjct: 64 LDETEEVY 71
>gi|322702469|gb|EFY94114.1| LSM domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 190
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 24/94 (25%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI-------------------IGFDEY 49
++ PIN+IF+ LQS A + +WL+EQ +RIEG+I GFDE+
Sbjct: 12 VLLPPINMIFKLLQSNATVSVWLYEQLSIRIEGKIRVRTPFKLKSVRCHADWLSQGFDEF 71
Query: 50 MNLVLDDAEEVH-----IKKNTRKPLGFFSKETT 78
MNLV+DDA EV K TR+ LG + T+
Sbjct: 72 MNLVIDDAVEVSQVTKTNDKETRRQLGMKPQNTS 105
>gi|302309857|ref|XP_002999588.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049185|emb|CAR58061.1| unnamed protein product [Candida glabrata]
Length = 94
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+ + + PIN IF LQ + + WL+EQ +RI G I GFDE+MN+V+DDA EV
Sbjct: 1 MSGKSKGKAIVPPINCIFNHLQQQTPVTFWLYEQVGIRIRGTIRGFDEFMNVVIDDAVEV 60
Query: 61 HIKKNTRKPL 70
I+ + + L
Sbjct: 61 PIEAKSGREL 70
>gi|389602182|ref|XP_001566763.2| putative small nuclear ribonucleoprotein polypeptide e
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|322505349|emb|CAM40282.2| putative small nuclear ribonucleoprotein polypeptide e
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 86
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 4 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIK 63
+ + R M P ++ RF+QS R+ +WL R+EG ++G+DE+MN+VL D E +++
Sbjct: 2 SSLTRQMENPTGVVHRFMQSHQRVCVWLVHDSHTRLEGNLLGYDEFMNVVLGDTTETNLR 61
Query: 64 KNTRKPLG 71
+ R LG
Sbjct: 62 NDKRYNLG 69
>gi|378727606|gb|EHY54065.1| small nuclear ribonucleoprotein E [Exophiala dermatitidis
NIH/UT8656]
Length = 94
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
++ + PI+ IF LQ ++ + IWL+E RIEG+I GFDE+MNLV+DDA EV +
Sbjct: 10 RKTLLAPIHFIFSLLQKRSTVSIWLYENLRTRIEGKIRGFDEFMNLVIDDAVEVQL 65
>gi|72390193|ref|XP_845391.1| small nuclear ribonucleoprotein Sm-E [Trypanosoma brucei TREU927]
gi|9837178|gb|AAG00463.1|AF280395_1 Sm-E [Trypanosoma brucei]
gi|62360561|gb|AAX80973.1| small nuclear ribonucleoprotein Sm-E [Trypanosoma brucei]
gi|70801926|gb|AAZ11832.1| small nuclear ribonucleoprotein Sm-E [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261328791|emb|CBH11769.1| small nuclear ribonucleoprotein Sm-E [Trypanosoma brucei
gambiense DAL972]
Length = 86
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKP 69
M +P ++ R+L+ R+ +WL + ++IEG ++G+DE+MN+VL DA EVH+K
Sbjct: 8 MVKPTVVVHRYLKESQRVCVWLVHETKMKIEGVLLGYDEFMNVVLGDATEVHLKTGEVVQ 67
Query: 70 LG 71
LG
Sbjct: 68 LG 69
>gi|71412367|ref|XP_808372.1| small nuclear ribonucleoprotein Sm-E [Trypanosoma cruzi strain CL
Brener]
gi|70872563|gb|EAN86521.1| small nuclear ribonucleoprotein Sm-E, putative [Trypanosoma
cruzi]
Length = 115
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M++T Q M +P +++ R++ R+ +WL ++IEG I+G+DE+MN+VL DA EV
Sbjct: 30 MSATTKQ--MVKPTSIVHRYMTEGQRVCVWLVHDTKMKIEGVILGYDEFMNVVLGDASEV 87
Query: 61 HIK 63
H K
Sbjct: 88 HHK 90
>gi|397624778|gb|EJK67508.1| hypothetical protein THAOC_11446 [Thalassiosira oceanica]
Length = 222
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 10 MTQPINLIFRF----LQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKN 65
+ P LI R ++ K R++IWL+E + IEG+IIGFDEYMN VLD A EV +K
Sbjct: 142 LCGPYILISRIPLAQIRKKTRVKIWLYEDTRMSIEGQIIGFDEYMNFVLDSATEVDMKTG 201
Query: 66 TRKPLG 71
R +G
Sbjct: 202 KRTDVG 207
>gi|401425575|ref|XP_003877272.1| small nuclear ribonucleoprotein polypeptide e,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493517|emb|CBZ28805.1| small nuclear ribonucleoprotein polypeptide e,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 86
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
R M P ++ RF+Q R+ +WL LR+EG ++G+DE+MN+VL D E +++ N
Sbjct: 6 RQMENPTGVVHRFMQDHQRVCVWLVHDPQLRLEGNLLGYDEFMNVVLGDTTETNLRNNKS 65
Query: 68 KPLG 71
LG
Sbjct: 66 YRLG 69
>gi|367001997|ref|XP_003685733.1| hypothetical protein TPHA_0E02070 [Tetrapisispora phaffii CBS
4417]
gi|357524032|emb|CCE63299.1| hypothetical protein TPHA_0E02070 [Tetrapisispora phaffii CBS
4417]
Length = 94
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
PIN +F FLQ + + WL+EQ RI G++ GFDE+MN+V+D+A E+ + T
Sbjct: 11 PINSVFNFLQQQTLVSFWLYEQVGFRIRGKVAGFDEFMNVVIDNAIEIPVDAET 64
>gi|71666529|ref|XP_820222.1| small nuclear ribonucleoprotein Sm-E [Trypanosoma cruzi strain CL
Brener]
gi|70885559|gb|EAN98371.1| small nuclear ribonucleoprotein Sm-E, putative [Trypanosoma
cruzi]
Length = 86
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M++T Q M +P +++ R++ R+ +WL ++IEG I+G+DE+MN+VL DA EV
Sbjct: 1 MSATTKQ--MVKPTSIVHRYMTEGQRVCVWLVHDTKMKIEGVILGYDEFMNVVLGDASEV 58
Query: 61 HIK 63
H K
Sbjct: 59 HHK 61
>gi|398019352|ref|XP_003862840.1| small nuclear ribonucleoprotein polypeptide e, putative
[Leishmania donovani]
gi|322501071|emb|CBZ36148.1| small nuclear ribonucleoprotein polypeptide e, putative
[Leishmania donovani]
Length = 86
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
R M P ++ RF+Q R+ +WL +R+EG ++G+DE+MN+VL D E +++ N
Sbjct: 6 RQMENPTGVVHRFMQDHQRVCVWLVHDPQMRLEGNLLGYDEFMNVVLGDTTETNLRNNKS 65
Query: 68 KPLG 71
LG
Sbjct: 66 YRLG 69
>gi|146093720|ref|XP_001466971.1| putative small nuclear ribonucleoprotein polypeptide e
[Leishmania infantum JPCM5]
gi|134071335|emb|CAM70021.1| putative small nuclear ribonucleoprotein polypeptide e
[Leishmania infantum JPCM5]
Length = 86
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
R M P ++ RF+Q R+ +WL +R+EG ++G+DE+MN+VL D E +++ N
Sbjct: 6 RQMENPTGVVHRFMQDHQRVCVWLVHDPQMRLEGNLLGYDEFMNVVLGDTTETNLRNNKS 65
Query: 68 KPLG 71
LG
Sbjct: 66 YRLG 69
>gi|6062981|gb|AAF03088.1|AF126283_1 SmE protein [Leptomonas collosoma]
Length = 94
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
++M +P ++I +F+ ++ R+ +WL ++IEG ++G+DE+MN+VL DA E + K
Sbjct: 14 KLMVKPSSVIHKFMTTQQRVCVWLVHDAHIKIEGNLLGYDEFMNVVLGDATETNSKTKES 73
Query: 68 KPLG 71
LG
Sbjct: 74 THLG 77
>gi|119589573|gb|EAW69167.1| hCG23490, isoform CRA_b [Homo sapiens]
Length = 52
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 37 LRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
+RIEG IIGFDEYMNLVLDDAEE+H K +RK LG
Sbjct: 1 MRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLG 35
>gi|332248094|ref|XP_003273196.1| PREDICTED: small nuclear ribonucleoprotein E [Nomascus
leucogenys]
Length = 52
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 37 LRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
+RIEG IIGFDEYMNLVLDDAEE+H K +RK LG
Sbjct: 1 MRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLG 35
>gi|157872335|ref|XP_001684716.1| putative small nuclear ribonucleoprotein polypeptide e
[Leishmania major strain Friedlin]
gi|68127786|emb|CAJ06176.1| putative small nuclear ribonucleoprotein polypeptide e
[Leishmania major strain Friedlin]
Length = 86
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 8 RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
R M P ++ RF+Q R+ +WL +R+EG ++G+DE+MN+VL D E +++ +
Sbjct: 6 RQMENPTGVVHRFMQDHQRVCVWLVHDPQIRLEGNLLGYDEFMNVVLGDTTETNLRNSKS 65
Query: 68 KPLG 71
LG
Sbjct: 66 YRLG 69
>gi|340054134|emb|CCC48428.1| small nuclear ribonucleoprotein Sm-E [Trypanosoma vivax Y486]
Length = 86
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M++T Q M +P N++ R+++ R+ +WL ++IEG ++G+DE+MN+VL DA EV
Sbjct: 1 MSTTTKQ--MIKPTNVVHRYMKEGQRVCVWLVHDTKMKIEGVLLGYDEFMNVVLGDAAEV 58
>gi|393247818|gb|EJD55325.1| hypothetical protein AURDEDRAFT_50301, partial [Auricularia
delicata TFB-10046 SS5]
Length = 65
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 27 IQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT-RKPLG 71
I IWL++ ++RIEGRIIGFDE+MN+V+DDA EV+ K R+ LG
Sbjct: 4 ISIWLYDNVEMRIEGRIIGFDEFMNVVIDDATEVYTDKTKERRLLG 49
>gi|171683351|ref|XP_001906618.1| hypothetical protein [Podospora anserina S mat+]
gi|170941635|emb|CAP67289.1| unnamed protein product [Podospora anserina S mat+]
Length = 96
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV-HIKKN-- 65
++ PIN +F+ LQ + +QIWL+EQ +RI G I GFDE+MNLV+DDA EV I K
Sbjct: 12 VLLPPINFLFKLLQQRTPVQIWLYEQLSIRIIGIIRGFDEFMNLVIDDAVEVKQISKTND 71
Query: 66 --TRKPLG 71
TR+ LG
Sbjct: 72 TETRRNLG 79
>gi|161899071|ref|XP_001712762.1| mRNA splicing protein [Bigelowiella natans]
gi|75756255|gb|ABA27150.1| mRNA splicing protein [Bigelowiella natans]
Length = 80
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 6 VQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDA 57
++++M PINL++R+L K I + L ++K+ I G+IIGFDEYMN+VL +A
Sbjct: 1 MKKLMVHPINLLYRYLIGKNIILVCL-KEKNKTINGKIIGFDEYMNIVLSEA 51
>gi|399949646|gb|AFP65304.1| small nuclear ribonucleoprotein E [Chroomonas mesostigmatica
CCMP1168]
Length = 82
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
+++QPINL+FRF Q++ I I L K I G I+GFDE+MN+VL++A E++
Sbjct: 1 MISQPINLLFRFFQNRNLISITLQNAKLNTIIGIILGFDEFMNIVLENAFEIN 53
>gi|51847692|gb|AAU10483.1| small nuclear ribonucleoprotein polypepide-E [Felis catus]
Length = 32
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 26/31 (83%)
Query: 41 GRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
G IIGFDEYMNLVLDDAEE+H K +RK LG
Sbjct: 2 GCIIGFDEYMNLVLDDAEEIHSKTKSRKQLG 32
>gi|162606552|ref|XP_001713306.1| putative small nuclear ribonucleoprotein E [Guillardia theta]
gi|12580772|emb|CAC27090.1| putative small nuclear ribonucleoprotein E [Guillardia theta]
Length = 78
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
M QPIN +F+FL+ K + I D +EG +IGFDE+MNLV+++ E
Sbjct: 1 MIQPINQLFKFLKEKNLVTIIFKGSNDYILEGNLIGFDEFMNLVIENTTE 50
>gi|401825470|ref|XP_003886830.1| LSM domain-containing protein [Encephalitozoon hellem ATCC 50504]
gi|392997986|gb|AFM97849.1| LSM domain-containing protein [Encephalitozoon hellem ATCC 50504]
Length = 73
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 11 TQPINLIFRFLQSKARIQIWLFEQKDLRIE--GRIIGFDEYMNLVLDDAEEVHIKKN 65
T P+ ++ FL ++IW +KD+R + GRI+GFDEYMNLV+D+ + ++ K
Sbjct: 8 TLPLEKLYDFLSKSTDVEIW---EKDIRTKHRGRIVGFDEYMNLVIDNGAKRYLLKG 61
>gi|396080948|gb|AFN82568.1| small nuclear ribonucleoprotein E [Encephalitozoon romaleae
SJ-2008]
Length = 73
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIE--GRIIGFDEYMNLVLDDAEEVHIKKN 65
P+ ++ FL ++IW +KD+R++ GRI+GFDEYMNLV+D+ + +I K
Sbjct: 10 PLEKLYDFLSKSIDVEIW---EKDIRVKHKGRIVGFDEYMNLVIDNGTKRYILKG 61
>gi|281341468|gb|EFB17052.1| hypothetical protein PANDA_006654 [Ailuropoda melanoleuca]
Length = 30
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 23/27 (85%)
Query: 45 GFDEYMNLVLDDAEEVHIKKNTRKPLG 71
GFDEYMNLVLDDAEE+H K +RK LG
Sbjct: 1 GFDEYMNLVLDDAEEIHSKTKSRKQLG 27
>gi|303388441|ref|XP_003072455.1| small nuclear ribonucleoprotein E [Encephalitozoon intestinalis
ATCC 50506]
gi|303301595|gb|ADM11095.1| small nuclear ribonucleoprotein E [Encephalitozoon intestinalis
ATCC 50506]
Length = 73
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDL--RIEGRIIGFDEYMNLVLDDAEEVHIKKN 65
P+ I+ FL A ++IW +KD+ R +GRI+GFDEYMN+V+D + ++ K
Sbjct: 10 PLEKIYAFLSRAADVEIW---EKDIGVRHKGRIVGFDEYMNIVMDSGAKRYLLKG 61
>gi|449018855|dbj|BAM82257.1| similar to Sm protein E [Cyanidioschyzon merolae strain 10D]
Length = 181
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P L+ + +AR+++WLFE +EG + GFDE+ NLVL D E
Sbjct: 12 PEQLLATLARQQARVEVWLFENTRYSLEGTLRGFDEHTNLVLVDTVE 58
>gi|449017577|dbj|BAM80979.1| Sm protein E [Cyanidioschyzon merolae strain 10D]
Length = 105
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P L+ + +AR+++WLFE +EG + GFDE+ NLVL D E
Sbjct: 12 PEQLLATLARQQARVEVWLFENTRYSLEGTLRGFDEHTNLVLVDTVE 58
>gi|350854337|emb|CCD58316.1| unnamed protein product [Schistosoma mansoni]
Length = 53
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 22/28 (78%)
Query: 44 IGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
IGFDEYMNLVL DA E H+K +KPLG
Sbjct: 16 IGFDEYMNLVLADACERHMKSGAKKPLG 43
>gi|449016467|dbj|BAM79869.1| Sm protein E [Cyanidioschyzon merolae strain 10D]
Length = 105
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P L+ + +AR+++WLFE +EG + GFDE+ NLVL D E
Sbjct: 12 PEQLLATLARQQARVEVWLFENTRYSLEGTLRGFDEHTNLVLVDTVE 58
>gi|193582435|ref|XP_001943900.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm11-like
[Acyrthosiphon pisum]
Length = 217
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPL 70
P++ I F +K R+++++ +R EG II FD++ NLV+DD +EV +KN K L
Sbjct: 108 PLSRIALFCYAKKRVKVYIRSAVSVRGHCEGYIIAFDKHWNLVMDDVDEVWTRKNKYKSL 167
Query: 71 GF 72
Sbjct: 168 AI 169
>gi|307203438|gb|EFN82513.1| Probable small nuclear ribonucleoprotein E [Harpegnathos
saltator]
Length = 51
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQ-IWLFEQKDLRIEGRIIGFDEYMN 51
KVQ++M Q I L+ +LQ+ +Q I L ++ L IEG IIGF+EY+N
Sbjct: 1 GPQKVQKVMVQFIRLVLFYLQNHRCVQVIRLLDKVKLEIEGHIIGFNEYVN 51
>gi|154309621|ref|XP_001554144.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 59
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI 43
++++ PIN IF+ LQ + IWL+EQ +RIEG+I
Sbjct: 9 RKVLLPPINFIFKLLQQHTPVSIWLYEQLGIRIEGKI 45
>gi|422293907|gb|EKU21207.1| hypothetical protein NGA_2089810, partial [Nannochloropsis gaditana
CCMP526]
gi|422294090|gb|EKU21390.1| hypothetical protein NGA_2089820, partial [Nannochloropsis gaditana
CCMP526]
Length = 162
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 6 VQRIMTQPINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEV 60
+ + T P L++R Q K + + + + LR + GR+ GFD + NLVL++AEE
Sbjct: 82 AESLKTGPTGLLYRCYQEKKAVVVTVRRRSGLRGTVTGRLRGFDRHFNLVLEEAEEA 138
>gi|367033203|ref|XP_003665884.1| hypothetical protein MYCTH_2310069 [Myceliophthora thermophila
ATCC 42464]
gi|347013156|gb|AEO60639.1| hypothetical protein MYCTH_2310069 [Myceliophthora thermophila
ATCC 42464]
Length = 59
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI 43
++ PIN +FR LQ + +QIWL+EQ +RI G I
Sbjct: 12 VLLPPINFLFRLLQQRTTVQIWLYEQLSIRIIGTI 46
>gi|392512547|emb|CAD25131.2| SMALL NUCLEAR RIBONUCLEOPROTEIN E [Encephalitozoon cuniculi
GB-M1]
Length = 73
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDL--RIEGRIIGFDEYMNLVLD 55
P+ I+ FL ++IW +KD+ + +GRI+GFDEYMN+V+D
Sbjct: 10 PLEKIYDFLSRSIDVEIW---EKDMGAKHKGRIVGFDEYMNVVVD 51
>gi|432328294|ref|YP_007246438.1| small nuclear ribonucleoprotein [Aciduliprofundum sp. MAR08-339]
gi|432135003|gb|AGB04272.1| small nuclear ribonucleoprotein [Aciduliprofundum sp. MAR08-339]
Length = 72
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRI-EGRIIGFDEYMNLVLDDAEE 59
MT P+ ++ F+ RI + L KD R+ EG+++GFD+YMN+VL D EE
Sbjct: 1 MTMPLKMLENFMNK--RISLLL---KDNRVLEGKLVGFDDYMNMVLMDTEE 46
>gi|19074021|ref|NP_584627.1| SMALL NUCLEAR RIBONUCLEOPROTEIN E [Encephalitozoon cuniculi
GB-M1]
Length = 111
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDL--RIEGRIIGFDEYMNLVLD 55
P+ I+ FL ++IW +KD+ + +GRI+GFDEYMN+V+D
Sbjct: 48 PLEKIYDFLSRSIDVEIW---EKDMGAKHKGRIVGFDEYMNVVVD 89
>gi|124809480|ref|XP_001348585.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|23497482|gb|AAN37024.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 101
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ L+ + + SK IW+ + D I G+++GFDEY+N+VL+D E
Sbjct: 12 PLALMDKCIGSK----IWIMMKGDKEIVGKLVGFDEYVNMVLEDVTE 54
>gi|449329361|gb|AGE95634.1| small nuclear ribonucleoprotein e [Encephalitozoon cuniculi]
Length = 111
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDL--RIEGRIIGFDEYMNLVLD 55
P+ I+ FL ++IW +KD+ + +GRI+GFDEYMN+V+D
Sbjct: 48 PLEKIYDFLSRSIDVEIW---EKDMGAKHKGRIVGFDEYMNVVVD 89
>gi|156100461|ref|XP_001615958.1| U6 snRNA-associated Sm-like protein LSm5 [Plasmodium vivax Sal-1]
gi|221059589|ref|XP_002260440.1| small nuclear ribonuclear protein [Plasmodium knowlesi strain H]
gi|148804832|gb|EDL46231.1| U6 snRNA-associated Sm-like protein LSm5, putative [Plasmodium
vivax]
gi|193810513|emb|CAQ41707.1| small nuclear ribonuclear protein, putative [Plasmodium knowlesi
strain H]
gi|389585422|dbj|GAB68153.1| U6 snRNA-associated Sm-like protein LSm5 [Plasmodium cynomolgi
strain B]
Length = 101
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ L+ + + SK IW+ + D I G+++GFDEY+N+VL+D E
Sbjct: 12 PLALMDKCIGSK----IWVMLKGDKEIVGKLVGFDEYVNMVLEDVTE 54
>gi|350416213|ref|XP_003490876.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm11-like [Bombus
impatiens]
Length = 223
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 4 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEVH 61
K+QR P+ ++ +++S+ R++++ + +R +E + FD++ NL L+D EV
Sbjct: 105 AKMQRAFG-PLGMLHGYMESRTRVKVYTRNARGIRGHVEAYVAAFDKHWNLALEDCFEVW 163
Query: 62 IKKNTRK------PLGFFSKETT 78
+K RK P G KE T
Sbjct: 164 TRKVKRKAPALGAPSGVKRKEDT 186
>gi|340711443|ref|XP_003394285.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm11-like [Bombus
terrestris]
Length = 223
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 4 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEVH 61
K+QR P+ ++ +++S+ R++++ + +R +E + FD++ NL L+D EV
Sbjct: 105 AKMQRAFG-PLGMLHGYMESRTRVKVYTRNARGIRGHVEAYVAAFDKHWNLALEDCFEVW 163
Query: 62 IKKNTRK------PLGFFSKETT 78
+K RK P G KE T
Sbjct: 164 TRKVKRKAPALGAPSGVKRKEDT 186
>gi|407921630|gb|EKG14771.1| hypothetical protein MPH_08046 [Macrophomina phaseolina MS6]
Length = 83
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E + N K
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYQGNQTK 58
>gi|156086956|ref|XP_001610885.1| snRNP Sm-like protein [Babesia bovis T2Bo]
gi|154798138|gb|EDO07317.1| snRNP Sm-like protein, putative [Babesia bovis]
Length = 87
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGF 72
P+ L+ + L +K +W+ + + I G + GFD+YMN+VLDD E T KP G
Sbjct: 12 PLALVDKCLGTK----VWIIMKGEKEITGVLRGFDDYMNVVLDDVTEY-----TFKPTGV 62
Query: 73 FSKE 76
+ E
Sbjct: 63 ETTE 66
>gi|254166807|ref|ZP_04873661.1| hypothetical protein ABOONEI_1899 [Aciduliprofundum boonei T469]
gi|254167437|ref|ZP_04874289.1| hypothetical protein ABOONEI_2250 [Aciduliprofundum boonei T469]
gi|289596330|ref|YP_003483026.1| Like-Sm ribonucleoprotein core [Aciduliprofundum boonei T469]
gi|197623700|gb|EDY36263.1| hypothetical protein ABOONEI_2250 [Aciduliprofundum boonei T469]
gi|197624417|gb|EDY36978.1| hypothetical protein ABOONEI_1899 [Aciduliprofundum boonei T469]
gi|289534117|gb|ADD08464.1| Like-Sm ribonucleoprotein core [Aciduliprofundum boonei T469]
Length = 72
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRI-EGRIIGFDEYMNLVLDDAEE 59
MT P+ ++ FL RI + L KD R+ EG+++G+D+YMN+VL D EE
Sbjct: 1 MTLPLKMLENFLNK--RISLLL---KDNRVLEGKLVGYDDYMNMVLMDTEE 46
>gi|383848568|ref|XP_003699921.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm11-like
[Megachile rotundata]
Length = 225
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ +++ +++S+ RI+++ +R +E + FD++ NL L+D EV +K RK
Sbjct: 113 PLGMLYGYMESRTRIKVYTRNAYGIRGHVEAYVAAFDKHWNLALEDCFEVWTRKTKRK 170
>gi|212532417|ref|XP_002146365.1| small nuclear ribonucleoprotein (LSM5), putative [Talaromyces
marneffei ATCC 18224]
gi|210071729|gb|EEA25818.1| small nuclear ribonucleoprotein (LSM5), putative [Talaromyces
marneffei ATCC 18224]
Length = 83
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYAGNQEK 58
>gi|397624738|gb|EJK67493.1| hypothetical protein THAOC_11464 [Thalassiosira oceanica]
Length = 478
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEV 60
S++ + + P++L++ L +++R+++ + +R + G+++ FD++ N+++ DA+EV
Sbjct: 228 SSRYESPKSGPLSLLYSILATRSRVRVMVRYVDCIRGVLTGQLVAFDKHFNMIIRDADEV 287
Query: 61 HIKKNTR 67
+ + TR
Sbjct: 288 YTGRVTR 294
>gi|358389647|gb|EHK27239.1| hypothetical protein TRIVIDRAFT_73167 [Trichoderma virens Gv29-8]
Length = 84
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|71033371|ref|XP_766327.1| U6 small nuclear ribonucleoprotein E [Theileria parva strain
Muguga]
gi|68353284|gb|EAN34044.1| U6 small nuclear ribonucleoprotein E, putative [Theileria parva]
Length = 90
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDD 56
P+ LI + L SK IW+ + D I G + GFD+YMN+VL+D
Sbjct: 12 PLALIDKCLGSK----IWIIMKNDKEITGTLRGFDDYMNMVLED 51
>gi|84998502|ref|XP_953972.1| (U6) snRNA-associated Sm-like protein [Theileria annulata]
gi|65304970|emb|CAI73295.1| (U6) snRNA-associated Sm-like protein, putative [Theileria
annulata]
Length = 90
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDD 56
P+ LI + L SK IW+ + D I G + GFD+YMN+VL+D
Sbjct: 12 PLALIDKCLGSK----IWIIMKNDKEITGTLRGFDDYMNMVLED 51
>gi|403221170|dbj|BAM39303.1| uncharacterized protein TOT_010000762 [Theileria orientalis
strain Shintoku]
Length = 90
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDD 56
P+ LI + L SK IW+ + D I G + GFD+YMN+VL+D
Sbjct: 12 PLALIDKCLGSK----IWIIMKNDKEITGTLRGFDDYMNMVLED 51
>gi|390597684|gb|EIN07083.1| like-Sm ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 84
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + S+ IW+ + D G ++GFD+++N+VLDD E +K
Sbjct: 7 PLELIDRCIGSR----IWVIMKNDREFTGTLLGFDDFVNMVLDDVTEFETTPEGKK 58
>gi|296805413|ref|XP_002843531.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238844833|gb|EEQ34495.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 84
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI R + SK IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 7 PLELIDRCVGSK----IWVVMKGDKEFSGTLLGFDDYVNMVLEDVTE 49
>gi|444731320|gb|ELW71676.1| Transmembrane protein 178 [Tupaia chinensis]
Length = 264
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 22/24 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQ 28
KVQ++ QPINLIFR+LQ++++IQ
Sbjct: 9 KVQKVTVQPINLIFRYLQNRSQIQ 32
>gi|224059779|ref|XP_002299989.1| predicted protein [Populus trichocarpa]
gi|224103927|ref|XP_002313247.1| predicted protein [Populus trichocarpa]
gi|118484238|gb|ABK93999.1| unknown [Populus trichocarpa]
gi|222847247|gb|EEE84794.1| predicted protein [Populus trichocarpa]
gi|222849655|gb|EEE87202.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA+T +++ P LI R + SK IW+ + D + G + GFD Y+N+VL+D E
Sbjct: 1 MANTNPSQLL--PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEY 54
Query: 61 HIKKNTRK 68
I R+
Sbjct: 55 EITAEGRR 62
>gi|323507716|emb|CBQ67587.1| probable U6 snRNA-associated Sm-like protein LSm5 [Sporisorium
reilianum SRZ2]
Length = 103
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S IW+ + D G ++GFD+Y+N+VL+D E + +K
Sbjct: 24 PLELIDKCIGS----SIWVIMKTDREFSGTLLGFDDYVNMVLEDVTEYETTPDGKK 75
>gi|342878459|gb|EGU79796.1| hypothetical protein FOXB_09655 [Fusarium oxysporum Fo5176]
gi|408388349|gb|EKJ68035.1| hypothetical protein FPSE_11846 [Fusarium pseudograminearum
CS3096]
Length = 83
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVIMKGDKEFSGTLVGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|367025621|ref|XP_003662095.1| hypothetical protein MYCTH_2302246 [Myceliophthora thermophila
ATCC 42464]
gi|347009363|gb|AEO56850.1| hypothetical protein MYCTH_2302246 [Myceliophthora thermophila
ATCC 42464]
Length = 85
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVIMKGDKEFAGTLVGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|336473000|gb|EGO61160.1| hypothetical protein NEUTE1DRAFT_116005 [Neurospora tetrasperma
FGSC 2508]
gi|350293750|gb|EGZ74835.1| putative U6 SNRNA-associated SM-LIKE protein LSM5 [Neurospora
tetrasperma FGSC 2509]
gi|380092260|emb|CCC10036.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 84
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVVMKGDKEFSGTLVGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|268561698|ref|XP_002638393.1| C. briggsae CBR-LSM-5 protein [Caenorhabditis briggsae]
gi|341889312|gb|EGT45247.1| hypothetical protein CAEBREN_08263 [Caenorhabditis brenneri]
gi|341889389|gb|EGT45324.1| hypothetical protein CAEBREN_18101 [Caenorhabditis brenneri]
Length = 91
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
ST P+ LI + + SK IW+ + D I G + GFD+Y+N+VL+D E
Sbjct: 3 TSTSTNPNTLLPLELIDKCIGSK----IWVIMKNDKEIVGTLTGFDDYVNMVLEDVVE 56
>gi|17560310|ref|NP_506870.1| Protein LSM-5 [Caenorhabditis elegans]
gi|3876465|emb|CAB03013.1| Protein LSM-5 [Caenorhabditis elegans]
Length = 91
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
ST P+ LI + + SK IW+ + D I G + GFD+Y+N+VL+D E
Sbjct: 3 TSTSTNPNTLLPLELIDKCIGSK----IWVIMKNDKEIVGTLTGFDDYVNMVLEDVVE 56
>gi|309241419|ref|XP_003115877.1| CRE-LSM-5 protein [Caenorhabditis remanei]
gi|308256412|gb|EFP00365.1| CRE-LSM-5 protein [Caenorhabditis remanei]
Length = 91
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
ST P+ LI + + SK IW+ + D I G + GFD+Y+N+VL+D E
Sbjct: 3 TSTSTNPNTLLPLELIDKCIGSK----IWVIMKNDKEIVGTLTGFDDYVNMVLEDVVE 56
>gi|170085071|ref|XP_001873759.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651311|gb|EDR15551.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 86
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + S+ IW+ + D G+++GFD+++N+VL+D E +K
Sbjct: 7 PLELIDRCIGSR----IWVIMKSDREFTGKLLGFDDFVNMVLEDVTEYETTPQGKK 58
>gi|48477793|ref|YP_023499.1| snRNP Sm-like protein [Picrophilus torridus DSM 9790]
gi|48430441|gb|AAT43306.1| snRNP Sm-like protein [Picrophilus torridus DSM 9790]
Length = 71
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 16 LIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
L + L+ ++ L + + +EG + G+DEYMN+ LDDAEE
Sbjct: 4 LPMKMLEESLNKKVSLLLKDNRVLEGTLAGYDEYMNMTLDDAEE 47
>gi|16944624|emb|CAD11394.1| probable U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5 [Neurospora
crassa]
Length = 84
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVVMKGDKEFAGTLVGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|392597490|gb|EIW86812.1| like-Sm ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 84
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHI 62
P+ LI R + SK IW+ + D G ++GFD+++N+VL+D E I
Sbjct: 7 PLELIDRCIGSK----IWVVMKGDREFSGTLLGFDDFVNMVLEDVTEFEI 52
>gi|302697739|ref|XP_003038548.1| hypothetical protein SCHCODRAFT_13369 [Schizophyllum commune
H4-8]
gi|300112245|gb|EFJ03646.1| hypothetical protein SCHCODRAFT_13369 [Schizophyllum commune
H4-8]
Length = 84
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + S+ IW+ + D G ++GFD+++N+VL+D E RK
Sbjct: 7 PLELIDRCIGSR----IWVVMKNDHEFTGTLLGFDDFVNMVLEDVTEYETTAAGRK 58
>gi|440465859|gb|ELQ35159.1| hypothetical protein OOU_Y34scaffold00725g17 [Magnaporthe oryzae
Y34]
Length = 82
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVIMKGDKEFSGLLVGFDDYVNMVLEDVTEFDYSGNYTK 58
>gi|169843758|ref|XP_001828604.1| hypothetical protein CC1G_10275 [Coprinopsis cinerea
okayama7#130]
gi|116510312|gb|EAU93207.1| hypothetical protein CC1G_10275 [Coprinopsis cinerea
okayama7#130]
Length = 84
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + SK IW+ + D G ++GFD+++N+VL+D E RK
Sbjct: 7 PLELIDRCIGSK----IWVVMKNDREFTGTLLGFDDFVNMVLEDVTEFENTPQGRK 58
>gi|294885997|ref|XP_002771506.1| U6 small nuclear ribonucleoprotein E, putative [Perkinsus marinus
ATCC 50983]
gi|239875210|gb|EER03322.1| U6 small nuclear ribonucleoprotein E, putative [Perkinsus marinus
ATCC 50983]
Length = 97
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S+ IW+ + D + G + GFD+Y+N+VLDD E I + K
Sbjct: 20 PLALVDKCVGSR----IWVIMRGDRELVGTLRGFDDYVNMVLDDVTEYTILPDGGK 71
>gi|402081161|gb|EJT76306.1| U6 snRNA-associated Sm-like protein LSm5 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 82
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVIMKGDKEFSGLLVGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|388507376|gb|AFK41754.1| unknown [Lotus japonicus]
Length = 87
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MAS Q + P LI R + SK IW+ + D + G + GFD Y+N+VL+D E
Sbjct: 1 MASNPSQLL---PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEY 53
Query: 61 HIKKNTRK 68
I R+
Sbjct: 54 EITAEGRR 61
>gi|389623205|ref|XP_003709256.1| U6 snRNA-associated Sm-like protein LSm5 [Magnaporthe oryzae
70-15]
gi|351648785|gb|EHA56644.1| U6 snRNA-associated Sm-like protein LSm5 [Magnaporthe oryzae
70-15]
gi|440486474|gb|ELQ66335.1| hypothetical protein OOW_P131scaffold00400g22 [Magnaporthe oryzae
P131]
Length = 82
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVIMKGDKEFSGLLVGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|302909361|ref|XP_003050056.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256730993|gb|EEU44343.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 83
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVIMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|389751535|gb|EIM92608.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 85
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + S+ IW+ + + G ++GFD+++N+VL+D E I RK
Sbjct: 7 PLELIDRCIGSR----IWVIMKNEREFTGTLLGFDDFVNMVLEDVTEFEITSAGRK 58
>gi|444725073|gb|ELW65653.1| 60S ribosomal protein L7 [Tupaia chinensis]
Length = 186
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 22/24 (91%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQ 28
KVQ++M QPI LIFR+LQ+++RIQ
Sbjct: 9 KVQKVMVQPIKLIFRYLQNRSRIQ 32
>gi|396458116|ref|XP_003833671.1| similar to U6 snRNA-associated Sm-like protein LSm5
[Leptosphaeria maculans JN3]
gi|312210219|emb|CBX90306.1| similar to U6 snRNA-associated Sm-like protein LSm5
[Leptosphaeria maculans JN3]
Length = 84
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S QIW+ G+++GFD+Y+N+VL+D E+ + K
Sbjct: 8 PLELIDKCVGS----QIWVIMNGGKEFTGKLVGFDDYVNMVLEDVTEIDASEGNVK 59
>gi|380474440|emb|CCF45778.1| U6 snRNA-associated Sm-like protein LSm5 [Colletotrichum
higginsianum]
Length = 82
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVVMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|358392255|gb|EHK41659.1| hypothetical protein TRIATDRAFT_250596 [Trichoderma atroviride
IMI 206040]
Length = 84
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVVMKGDKEFSGTLMGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|340522327|gb|EGR52560.1| predicted protein [Trichoderma reesei QM6a]
Length = 84
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVIMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYTGNHTK 58
>gi|320032480|gb|EFW14433.1| small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
Length = 84
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV-HIKKNTRKP 69
P+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E + T+ P
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDREFSGTLLGFDDYVNMVLEDVTEFDYTAAQTKLP 60
>gi|295657072|ref|XP_002789110.1| hypothetical protein PAAG_08979 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284564|gb|EEH40130.1| hypothetical protein PAAG_08979 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 84
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV-HIKKNTRKP 69
P+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E + T+ P
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYTGAQTKLP 60
>gi|310792345|gb|EFQ27872.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 82
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVVMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYSGNHTK 58
>gi|257076617|ref|ZP_05570978.1| snRNP Sm-like protein [Ferroplasma acidarmanus fer1]
Length = 71
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 16 LIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
L + L+ ++ L + + + G ++G+DEYMN+ LDDAEE
Sbjct: 4 LPMKMLEENLNKKVTLLLKDNRSLVGTLVGYDEYMNMTLDDAEE 47
>gi|428672985|gb|EKX73898.1| U6 small nuclear ribonucleoprotein E, putative [Babesia equi]
Length = 88
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + L SK IW+ + D I G + GFD+YMN+VL++ E
Sbjct: 12 PLALIDKCLGSK----IWIIMKGDKEIAGILRGFDDYMNMVLEEVTE 54
>gi|392867674|gb|EAS29072.2| U6 snRNA-associated Sm-like protein LSm5 [Coccidioides immitis
RS]
Length = 84
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV-HIKKNTRKP 69
P+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E + T+ P
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDREFSGTLLGFDDYVNMVLEDVTEFDYTGAQTKLP 60
>gi|315045688|ref|XP_003172219.1| small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
gi|311342605|gb|EFR01808.1| small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
Length = 84
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDKEFSGTLLGFDDYVNMVLEDVTE 49
>gi|329765899|ref|ZP_08257464.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795327|ref|ZP_10378691.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329137605|gb|EGG41876.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 78
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 28 QIWLFEQKDLR-IEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
QI L + K + I G ++GFD++MNL+LD +EE+ ++ N++
Sbjct: 16 QIVLIKLKGGKTIRGNLLGFDQHMNLLLDSSEEIPVEGNSKS 57
>gi|168009596|ref|XP_001757491.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691185|gb|EDQ77548.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA +M P LI R + SK IW+ + D + G + GFD Y+N+VL+D E
Sbjct: 1 MAHNNPSHLM--PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEY 54
Query: 61 HIKKNTRK 68
I R+
Sbjct: 55 EITSEGRR 62
>gi|261190750|ref|XP_002621784.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239591207|gb|EEQ73788.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239614892|gb|EEQ91879.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327352333|gb|EGE81190.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 84
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV-HIKKNTRKP 69
P+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E + T+ P
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDKEFAGTLLGFDDYVNMVLEDVTEFDYTGAQTKLP 60
>gi|255513759|gb|EET90024.1| Sm-family ribonucleoprotein [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 75
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 12 QPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
+P +L+ R + + I++ + +L I G++ FD +MN+VLD+AEE+ + LG
Sbjct: 5 RPFDLLNRVISQQVLIRL----KNNLNIRGKVTSFDAHMNIVLDNAEELDANGELKAKLG 60
>gi|443896082|dbj|GAC73426.1| U6 snRNA-associated Sm-like protein [Pseudozyma antarctica T-34]
Length = 103
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S IW+ + + G ++GFD+Y+N+VL+D E ++ +K
Sbjct: 24 PLELIDKCIGS----SIWVIMKSEREFSGTLLGFDDYVNMVLEDVTEYETAQDGKK 75
>gi|403166044|ref|XP_003325954.2| U6 snRNA-associated Sm-like protein LSm5 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
gi|375166048|gb|EFP81535.2| U6 snRNA-associated Sm-like protein LSm5 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 128
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI R + S+ IW+ + G+++GFD+Y+N+VL+D E
Sbjct: 7 PLELIDRCIGSR----IWVIMKTGREFTGKLLGFDDYVNMVLEDVTE 49
>gi|225681342|gb|EEH19626.1| predicted protein [Paracoccidioides brasiliensis Pb03]
Length = 130
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV-HIKKNTRKP 69
P+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E + T+ P
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYTGAQTKLP 60
>gi|16081975|ref|NP_394385.1| hypothetical protein Ta0927 [Thermoplasma acidophilum DSM 1728]
gi|10640204|emb|CAC12056.1| hypothetical protein [Thermoplasma acidophilum]
Length = 67
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 18 FRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
+ L+ ++ L + + +EG + GFDEYMN+VLDD +E +N + LG
Sbjct: 1 MKMLEESVNKRVSLLLKDNRVLEGVLTGFDEYMNMVLDDVDENS--ENVSRKLG 52
>gi|336376883|gb|EGO05218.1| hypothetical protein SERLA73DRAFT_174233 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389815|gb|EGO30958.1| hypothetical protein SERLADRAFT_455383 [Serpula lacrymans var.
lacrymans S7.9]
Length = 85
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + S+ IW+ + D G ++GFD+++N+VL+D E +K
Sbjct: 7 PLELIDRCIGSR----IWVIMKSDREFTGTLLGFDDFVNMVLEDVTEYETTPQGKK 58
>gi|299471840|emb|CBN77010.1| Sm-like protein LSm5 [Ectocarpus siliculosus]
Length = 85
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ +W+ + D + G + GFD+Y+N+VLDD E + + K
Sbjct: 7 PLELIDKCIGSR----LWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEVDADGTK 58
>gi|409083153|gb|EKM83510.1| hypothetical protein AGABI1DRAFT_110162 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 84
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + SK IW+ + D G ++GFD+++N+VL+D E +K
Sbjct: 7 PLELIDRCIGSK----IWVVMKNDREFSGTLLGFDDFVNMVLEDVIEYETTPEGKK 58
>gi|297792081|ref|XP_002863925.1| hypothetical protein ARALYDRAFT_917817 [Arabidopsis lyrata subsp.
lyrata]
gi|297309760|gb|EFH40184.1| hypothetical protein ARALYDRAFT_917817 [Arabidopsis lyrata subsp.
lyrata]
Length = 88
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MAS Q + P LI R + SK IW+ + D + G + GFD Y+N+VL+D E
Sbjct: 1 MASNPSQLL---PSELIDRCIGSK----IWVIMKGDKELVGILKGFDVYVNMVLEDVTEY 53
Query: 61 HIKKNTRK 68
I R+
Sbjct: 54 EITAEGRR 61
>gi|426201795|gb|EKV51718.1| hypothetical protein AGABI2DRAFT_189942 [Agaricus bisporus var.
bisporus H97]
Length = 84
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + SK IW+ + D G ++GFD+++N+VL+D E +K
Sbjct: 7 PLELIDRCIGSK----IWVVMKNDREFSGTLLGFDDFVNMVLEDVIEYETTPEGKK 58
>gi|328777216|ref|XP_001120196.2| PREDICTED: u7 snRNA-associated Sm-like protein LSm11-like [Apis
mellifera]
Length = 224
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 4 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEVH 61
+K+QR P+ ++ +++++ RI+++ + +R +E + FD++ NL L+D E+
Sbjct: 105 SKMQRTFG-PLGMLHEYMENRTRIKVYTRNARGIRGHVEAYVAAFDKHWNLALEDCFEIW 163
Query: 62 IKKNTRK 68
+K RK
Sbjct: 164 TRKVKRK 170
>gi|259484847|tpe|CBF81418.1| TPA: small nuclear ribonucleoprotein (LSM5), putative
(AFU_orthologue; AFUA_7G04280) [Aspergillus nidulans
FGSC A4]
Length = 129
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 53 PLELIDKCVGSR----IWIIMKNDKEFSGTLLGFDDYVNMVLEDVTE 95
>gi|380030070|ref|XP_003698681.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm11-like [Apis
florea]
Length = 224
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 4 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEVH 61
+K+QR P+ ++ +++++ RI+++ + +R +E + FD++ NL L+D E+
Sbjct: 105 SKMQRTFG-PLGMLHEYMENRTRIKVYTRNARGIRGHVEAYVAAFDKHWNLALEDCFEIW 163
Query: 62 IKKNTRK 68
+K RK
Sbjct: 164 TRKVKRK 170
>gi|393218481|gb|EJD03969.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 85
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + S+ IW+ + D G ++GFD+++N+VLDD E RK
Sbjct: 7 PLELIDTCIGSR----IWVIMKNDREFTGTLLGFDDFVNMVLDDVTEYQYLPEGRK 58
>gi|388852511|emb|CCF53913.1| probable U6 snRNA-associated Sm-like protein LSm5 [Ustilago
hordei]
Length = 103
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S IW+ + D G ++GFD+Y+N+VL+D E + +K
Sbjct: 24 PLELIDKCIGS----SIWVIMKTDREFSGTLLGFDDYVNMVLEDVTEYETCLDGKK 75
>gi|390341850|ref|XP_003725544.1| PREDICTED: small nuclear ribonucleoprotein E-like
[Strongylocentrotus purpuratus]
Length = 48
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 50 MNLVLDDAEEVHIKKNTRKPLG 71
MN+VLDDAEE H K TRKPLG
Sbjct: 1 MNVVLDDAEEYHKKNKTRKPLG 22
>gi|395334578|gb|EJF66954.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 85
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + S+ IW+ + D G ++GFD+++N+VL+D E +K
Sbjct: 7 PLELIDRCIGSR----IWVIMKNDREFTGTLLGFDDFVNMVLEDVTEYETTPQGKK 58
>gi|395517528|ref|XP_003762928.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like
[Sarcophilus harrisii]
Length = 140
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKK 64
V R ++ P L+ + + S RI I + + D I G ++GFD+++N+VL+D E I
Sbjct: 55 PVTRSVSAPPELVDKCIGS--RIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFEITP 110
Query: 65 NTRK 68
R+
Sbjct: 111 EGRR 114
>gi|402217704|gb|EJT97783.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 85
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI R + S+ IW+ + + GR++GFD+++N+VL+D E
Sbjct: 7 PLELIDRCIGSR----IWVITKTEREFAGRLLGFDDFVNMVLEDVTE 49
>gi|317139035|ref|XP_003189120.1| U6 snRNA-associated Sm-like protein LSm5 [Aspergillus oryzae
RIB40]
Length = 102
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
+ST +++ P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 17 SSTMASQLL--PLELIDKCVGSR----IWVIMKNDKEFAGTLLGFDDYVNMVLEDVTE 68
>gi|413949490|gb|AFW82139.1| SAD1 [Zea mays]
Length = 137
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P LI R + SK IW+ + D + G + GFD Y+N+VL+D E R+
Sbjct: 60 PSELIDRCIGSK----IWVIMKGDKELVGTLCGFDVYVNMVLEDVTEYEYTAEGRR 111
>gi|327304591|ref|XP_003236987.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326459985|gb|EGD85438.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 84
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 7 PLELIDKCVGSK----IWIVMKGDKEFCGTLLGFDDYVNMVLEDVTE 49
>gi|209879413|ref|XP_002141147.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209556753|gb|EEA06798.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 112
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ I++ + D I G + GFDEY+N+VLD+ EE
Sbjct: 22 PLALIDKCIGSR----IYIILRGDREISGTLRGFDEYVNMVLDEVEE 64
>gi|307105649|gb|EFN53897.1| hypothetical protein CHLNCDRAFT_136065 [Chlorella variabilis]
Length = 239
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEE 59
+R+ P+ L+ R+ Q ++R+++ + +R EG ++ FD++MNLVL D EE
Sbjct: 103 ERVQHGPLLLLKRWYQQRSRVRVVTRHARGVRGSSEGLLVAFDKHMNLVLRDVEE 157
>gi|449468622|ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cucumis
sativus]
gi|449522508|ref|XP_004168268.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cucumis
sativus]
Length = 87
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA+ Q + P LI R + SK IW+ + D + G + GFD Y+N+VL+D E
Sbjct: 1 MATNPSQLL---PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEY 53
Query: 61 HIKKNTRK 68
I R+
Sbjct: 54 EITAEGRR 61
>gi|403166042|ref|XP_003889979.1| U6 snRNA-associated Sm-like protein LSm5, variant [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
gi|375166047|gb|EHS63049.1| U6 snRNA-associated Sm-like protein LSm5, variant [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
Length = 84
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + S+ IW+ + G+++GFD+Y+N+VL+D E +K
Sbjct: 7 PLELIDRCIGSR----IWVIMKTGREFTGKLLGFDDYVNMVLEDVTEFETTAEGQK 58
>gi|225433436|ref|XP_002285668.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform 1
[Vitis vinifera]
gi|297741927|emb|CBI33362.3| unnamed protein product [Vitis vinifera]
Length = 87
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P LI R + SK IW+ + D + G + GFD Y+N+VL+D E I R+
Sbjct: 10 PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRR 61
>gi|193891015|gb|ACF28661.1| small nuclear ribonucleoprotein E [Amphidinium carterae]
Length = 94
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + D + G + GFD+Y+N+VLDD E +K
Sbjct: 12 PLALIDKCIGSR----IWVIMKGDKELVGTLRGFDDYVNMVLDDVREYTFTPEGKK 63
>gi|296423698|ref|XP_002841390.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637628|emb|CAZ85581.1| unnamed protein product [Tuber melanosporum]
Length = 84
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 11/59 (18%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDD-------AEEVHIKK 64
P+ L+ + + S+ IW+ + D G ++GFD+Y+N+VL+D E+V +KK
Sbjct: 7 PLELVDKCVGSR----IWVVMKGDKEFSGTLVGFDDYVNMVLEDVTEYESTGEQVKLKK 61
>gi|156937769|ref|YP_001435565.1| like-Sm ribonucleoprotein, core [Ignicoccus hospitalis KIN4/I]
gi|156566753|gb|ABU82158.1| Like-Sm ribonucleoprotein, core [Ignicoccus hospitalis KIN4/I]
Length = 73
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 21 LQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
+ ++A +I L + +D ++ GR+ FD ++N+VL+DAEEV +++ +PLG
Sbjct: 8 VMAEAIGKIVLVKLRDGKVRGRLKTFDMHLNIVLEDAEEV--REDQTRPLG 56
>gi|356524941|ref|XP_003531086.1| PREDICTED: uncharacterized protein LOC100306359 [Glycine max]
gi|255628297|gb|ACU14493.1| unknown [Glycine max]
Length = 87
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P LI R + SK IW+ + D + G + GFD Y+N+VL+D E I R+
Sbjct: 10 PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRR 61
>gi|307169174|gb|EFN61990.1| U7 snRNA-associated Sm-like protein LSm11 [Camponotus floridanus]
Length = 116
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ ++ +++K RI+++ + +R +E ++ FD++ NL L+D EV +K RK
Sbjct: 7 PLGMLHGCMENKIRIRVYTRNARGIRGHVEAYVVAFDKHWNLALEDCYEVWSRKVKRK 64
>gi|116779179|gb|ABK21171.1| unknown [Picea sitchensis]
gi|116779217|gb|ABK21184.1| unknown [Picea sitchensis]
gi|224285498|gb|ACN40469.1| unknown [Picea sitchensis]
Length = 85
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P LI R + SK IW+ + D + G + GFD Y+N+VL+D E I R+
Sbjct: 10 PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRR 61
>gi|388498294|gb|AFK37213.1| unknown [Medicago truncatula]
Length = 87
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA+ Q + P LI R + SK IW+ + D + G + GFD Y+N+VL+D E
Sbjct: 1 MANNPSQLL---PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEY 53
Query: 61 HIKKNTRK 68
I R+
Sbjct: 54 EITAEGRR 61
>gi|410076164|ref|XP_003955664.1| hypothetical protein KAFR_0B02310 [Kazachstania africana CBS
2517]
gi|372462247|emb|CCF56529.1| hypothetical protein KAFR_0B02310 [Kazachstania africana CBS
2517]
Length = 87
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 10 MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKP 69
M+ P L + +W+ Q + G ++GFD+++N+++DDA+E + N
Sbjct: 1 MSLPDVLPLEVIDKTINQPVWIILQSNREFTGTLVGFDDFVNVIIDDAKEYIVNDNGENE 60
Query: 70 L 70
L
Sbjct: 61 L 61
>gi|115395198|ref|XP_001213486.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193055|gb|EAU34755.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 83
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 7 PLELIDKCVGSR----IWVIMKNDKEFSGTLLGFDDYVNMVLEDVTE 49
>gi|66804949|ref|XP_636207.1| hypothetical protein DDB_G0289453 [Dictyostelium discoideum AX4]
gi|74852215|sp|Q54HH8.1|SMDL_DICDI RecName: Full=Small nuclear ribonucleoprotein Sm D-like protein
gi|60464569|gb|EAL62706.1| hypothetical protein DDB_G0289453 [Dictyostelium discoideum AX4]
Length = 257
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEE 59
P++L+ R L+SK++I++ + +R G II FD++MN++L D EE
Sbjct: 166 PLSLLKRALESKSKIKVMIRGTNCIRGYCRGYIIAFDKHMNIILRDVEE 214
>gi|115463665|ref|NP_001055432.1| Os05g0389300 [Oryza sativa Japonica Group]
gi|357133866|ref|XP_003568543.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like
[Brachypodium distachyon]
gi|54287604|gb|AAV31348.1| putative snRNA associated protein [Oryza sativa Japonica Group]
gi|113578983|dbj|BAF17346.1| Os05g0389300 [Oryza sativa Japonica Group]
gi|215765216|dbj|BAG86913.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196723|gb|EEC79150.1| hypothetical protein OsI_19819 [Oryza sativa Indica Group]
gi|222622229|gb|EEE56361.1| hypothetical protein OsJ_05491 [Oryza sativa Japonica Group]
Length = 89
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P LI R + SK IW+ + D + G + GFD Y+N+VL+D E R+
Sbjct: 11 PSELIDRCIGSK----IWVIMKGDKELVGTLCGFDVYVNMVLEDVTEYEYTAEGRR 62
>gi|340344088|ref|ZP_08667220.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519229|gb|EGP92952.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 78
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 28 QIWLFEQKDLR-IEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
QI L + K + I G ++GFD++MNL+LD +EE+ + N++
Sbjct: 16 QIVLIKLKGGKTIRGNLLGFDQHMNLLLDSSEEIPTEGNSKS 57
>gi|330801323|ref|XP_003288678.1| hypothetical protein DICPUDRAFT_152939 [Dictyostelium purpureum]
gi|325081300|gb|EGC34821.1| hypothetical protein DICPUDRAFT_152939 [Dictyostelium purpureum]
Length = 92
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
AST++++I+ P+ LI + + S+ IW+ + D G ++GFD Y+N+ L D E
Sbjct: 5 ASTQIEQIL--PLELIEKCIGSR----IWIAMKNDKEFVGTLLGFDAYVNIFLKDVTE 56
>gi|339233484|ref|XP_003381859.1| putative LSM domain protein [Trichinella spiralis]
gi|339261308|ref|XP_003367972.1| putative LSM domain protein [Trichinella spiralis]
gi|316964809|gb|EFV49750.1| putative LSM domain protein [Trichinella spiralis]
gi|316979279|gb|EFV62087.1| putative LSM domain protein [Trichinella spiralis]
Length = 92
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
ST V P+ LI + + SK +W+ + + + G ++GFD+Y+N+VL+D E
Sbjct: 5 STAVNPSTLLPLELIDKCIGSK----LWIVMKGNKELVGTLLGFDDYVNIVLEDVIE 57
>gi|70987204|ref|XP_749081.1| small nuclear ribonucleoprotein (LSM5) [Aspergillus fumigatus
Af293]
gi|66846711|gb|EAL87043.1| small nuclear ribonucleoprotein (LSM5), putative [Aspergillus
fumigatus Af293]
gi|159123148|gb|EDP48268.1| small nuclear ribonucleoprotein (LSM5), putative [Aspergillus
fumigatus A1163]
Length = 83
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 7 PLELIDKCVGSR----IWVIMKGDKEFSGTLLGFDDYVNMVLEDVTE 49
>gi|449524146|ref|XP_004169084.1| PREDICTED: small nuclear ribonucleoprotein E-like isoform 1
[Cucumis sativus]
gi|449524148|ref|XP_004169085.1| PREDICTED: small nuclear ribonucleoprotein E-like isoform 2
[Cucumis sativus]
Length = 39
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 20/22 (90%)
Query: 50 MNLVLDDAEEVHIKKNTRKPLG 71
MNLVLDDAEEV++KK ++K LG
Sbjct: 1 MNLVLDDAEEVNVKKKSKKALG 22
>gi|400596491|gb|EJP64262.1| putative U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5 [Beauveria
bassiana ARSEF 2860]
Length = 82
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ IW+ + + G ++GFD+Y+N+VL+D E N K
Sbjct: 7 PLELIDKCVGSR----IWVIMKGEKEFSGTLVGFDDYVNMVLEDVTEFDYTGNHTK 58
>gi|317034233|ref|XP_001396223.2| U6 snRNA-associated Sm-like protein LSm5 [Aspergillus niger CBS
513.88]
gi|358373053|dbj|GAA89653.1| small nuclear ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 83
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 7 PLELIDKCVGSR----IWVIMKNDKEFAGTLLGFDDYVNMVLEDVTE 49
>gi|440632020|gb|ELR01939.1| hypothetical protein GMDG_05112 [Geomyces destructans 20631-21]
Length = 227
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 14 INLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
I LI R + SK IW+ + D G + GFD+Y+N+VL+D E T K
Sbjct: 139 IELIDRCVGSK----IWVVMKTDKEFTGTLTGFDDYVNMVLEDVTEFDYTGATTK 189
>gi|167517977|ref|XP_001743329.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778428|gb|EDQ92043.1| predicted protein [Monosiga brevicollis MX1]
Length = 83
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 12 QPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
QP+ L+ + + S RI + + K+L G ++GFD+++N+VL+D +E I N R+
Sbjct: 6 QPLELVDKCIGS--RIHVIMKNDKELV--GTLLGFDDFVNMVLEDVKEYVITPNGRE 58
>gi|121711305|ref|XP_001273268.1| small nuclear ribonucleoprotein (LSM5), putative [Aspergillus
clavatus NRRL 1]
gi|119401419|gb|EAW11842.1| small nuclear ribonucleoprotein (LSM5), putative [Aspergillus
clavatus NRRL 1]
Length = 83
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 7 PLELIDKCVGSR----IWVIMKGDKEFSGTLLGFDDYVNMVLEDVTE 49
>gi|449551015|gb|EMD41979.1| hypothetical protein CERSUDRAFT_110522 [Ceriporiopsis
subvermispora B]
Length = 85
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + S+ IW+ + D G ++GFD+++N+VL+D E +K
Sbjct: 7 PLELIDRCIGSR----IWVIMKSDREFTGTLLGFDDFVNMVLEDVTEYENTPQGKK 58
>gi|320163467|gb|EFW40366.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 304
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIE--GRIIGFDEYMNLVLDDAEEV-- 60
+++ + P+++++R ++ R ++W+ + K +R + ++ FD++ N+V+ D +E+
Sbjct: 171 RMEELQIGPLSVLYRCVKEHYRARLWIRDDKGIRSQMLATVLVFDKHFNMVVTDVQEIVD 230
Query: 61 -HIKKNTRKPL 70
+N RKP+
Sbjct: 231 MRRFRNLRKPI 241
>gi|226504910|ref|NP_001152573.1| SAD1 [Zea mays]
gi|226528898|ref|NP_001149693.1| SAD1 [Zea mays]
gi|242090409|ref|XP_002441037.1| hypothetical protein SORBIDRAFT_09g019200 [Sorghum bicolor]
gi|194697624|gb|ACF82896.1| unknown [Zea mays]
gi|195606068|gb|ACG24864.1| SAD1 [Zea mays]
gi|195609070|gb|ACG26365.1| SAD1 [Zea mays]
gi|195629524|gb|ACG36403.1| SAD1 [Zea mays]
gi|195638676|gb|ACG38806.1| SAD1 [Zea mays]
gi|195657645|gb|ACG48290.1| SAD1 [Zea mays]
gi|241946322|gb|EES19467.1| hypothetical protein SORBIDRAFT_09g019200 [Sorghum bicolor]
gi|413945216|gb|AFW77865.1| SAD1 isoform 1 [Zea mays]
gi|413945217|gb|AFW77866.1| SAD1 isoform 2 [Zea mays]
gi|413949491|gb|AFW82140.1| SAD1 [Zea mays]
Length = 88
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P LI R + SK IW+ + D + G + GFD Y+N+VL+D E R+
Sbjct: 11 PSELIDRCIGSK----IWVIMKGDKELVGTLCGFDVYVNMVLEDVTEYEYTAEGRR 62
>gi|356512167|ref|XP_003524792.1| PREDICTED: uncharacterized protein LOC100527929 [Glycine max]
gi|255633598|gb|ACU17158.1| unknown [Glycine max]
Length = 87
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P LI R + SK IW+ + D + G + GFD Y N+VL+D E I R+
Sbjct: 10 PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYANMVLEDVTEYEITAEGRR 61
>gi|390939095|ref|YP_006402833.1| Sm ribonucleoprotein-like protein [Desulfurococcus fermentans DSM
16532]
gi|390192202|gb|AFL67258.1| Like-Sm ribonucleoprotein core [Desulfurococcus fermentans DSM
16532]
Length = 75
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 32/51 (62%)
Query: 18 FRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
+ L+ Q+ + + ++ + G++ FD+++N+VLDDAEE+ +TRK
Sbjct: 6 HKILEENLGKQVLIKTKDNIPLRGKLRSFDQHLNIVLDDAEEILSNGSTRK 56
>gi|358054346|dbj|GAA99272.1| hypothetical protein E5Q_05966 [Mixia osmundae IAM 14324]
Length = 83
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S+ +W+ + + I G ++GFD+++N+VLDD E RK
Sbjct: 7 PLELIDKCIGSR----LWVVLKSEREIVGTLLGFDDFVNMVLDDVTEYENTAQGRK 58
>gi|238482069|ref|XP_002372273.1| small nuclear ribonucleoprotein (LSM5), putative [Aspergillus
flavus NRRL3357]
gi|220700323|gb|EED56661.1| small nuclear ribonucleoprotein (LSM5), putative [Aspergillus
flavus NRRL3357]
Length = 83
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 7 PLELIDKCVGSR----IWVIMKNDKEFAGTLLGFDDYVNMVLEDVTE 49
>gi|328856633|gb|EGG05753.1| hypothetical protein MELLADRAFT_87625 [Melampsora larici-populina
98AG31]
Length = 935
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI R + S+ IW+ + G+++GFD+Y+N+VL+D E
Sbjct: 859 PLELIDRCIGSR----IWVVMKTGREFTGKLLGFDDYVNMVLEDVTE 901
>gi|313586491|gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea brasiliensis]
Length = 87
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA+ Q + P LI R + SK IW+ + D + G + GFD Y+N+VL+D E
Sbjct: 1 MANNPSQLL---PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEY 53
Query: 61 HIKKNTRK 68
+ R+
Sbjct: 54 EVTAEGRR 61
>gi|13541906|ref|NP_111594.1| small nuclear ribonucleoprotein (snRNP)-like protein
[Thermoplasma volcanium GSS1]
gi|14325338|dbj|BAB60242.1| small nuclear ribonucleoprotein [Thermoplasma volcanium GSS1]
Length = 71
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 18 FRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
+ L+ ++ L + + +EG + G+D+YMN+VLDD +E +N + LG
Sbjct: 5 MKLLEESVNKRVSLLLKDNRVLEGTLTGYDDYMNMVLDDVDENS--ENVSRKLG 56
>gi|242775508|ref|XP_002478658.1| small nuclear ribonucleoprotein (LSM5), putative [Talaromyces
stipitatus ATCC 10500]
gi|218722277|gb|EED21695.1| small nuclear ribonucleoprotein (LSM5), putative [Talaromyces
stipitatus ATCC 10500]
Length = 105
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 28 QIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
+IW+ + D G ++GFD+Y+N+VL+D E N K
Sbjct: 40 KIWVVMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYAGNQEK 80
>gi|452077675|gb|AGF93625.1| like-Sm ribonucleoprotein, eukaryotic and archaea-type, core
[uncultured organism]
Length = 73
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
++ +P N FL ++ L + ++G +IGFD++MNLVL+D EE K+++R+
Sbjct: 2 VIMKPSN----FLNENLDTEVELLLKDGSILKGTLIGFDDHMNLVLEDTEEK--KEDSRR 55
Query: 69 PLG 71
+G
Sbjct: 56 RIG 58
>gi|164657261|ref|XP_001729757.1| hypothetical protein MGL_3301 [Malassezia globosa CBS 7966]
gi|159103650|gb|EDP42543.1| hypothetical protein MGL_3301 [Malassezia globosa CBS 7966]
Length = 87
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ L+ R + S IW+ + G+++GFD+Y+N+VL+DA E
Sbjct: 9 PLELVDRCIGS----SIWVVMKGQREFVGKLLGFDDYVNMVLEDAVE 51
>gi|403411591|emb|CCL98291.1| predicted protein [Fibroporia radiculosa]
Length = 600
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 28 QIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
+IW+ + + G ++GFD+++N+VL+D E I RK
Sbjct: 533 RIWVIMKSEREFTGTLLGFDDFVNMVLEDVTEYEITPQGRK 573
>gi|224011573|ref|XP_002295561.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583592|gb|ACI64278.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 414
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEV 60
++K + + P++L++ L ++ R+++ + +R + G +I FD++ N++L D +EV
Sbjct: 209 ASKYEHKNSGPLSLLYSILANRQRVRVMVRYVDCVRGTLTGYLIAFDKHFNMILKDVDEV 268
Query: 61 HIKKNTR 67
+ + TR
Sbjct: 269 YSGRVTR 275
>gi|302771065|ref|XP_002968951.1| hypothetical protein SELMODRAFT_90525 [Selaginella
moellendorffii]
gi|302816639|ref|XP_002989998.1| hypothetical protein SELMODRAFT_130618 [Selaginella
moellendorffii]
gi|300142309|gb|EFJ09011.1| hypothetical protein SELMODRAFT_130618 [Selaginella
moellendorffii]
gi|300163456|gb|EFJ30067.1| hypothetical protein SELMODRAFT_90525 [Selaginella
moellendorffii]
Length = 85
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P LI R + SK IW+ + D + G + GFD Y+N+VL+D E I + ++
Sbjct: 10 PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITPDGKR 61
>gi|397573274|gb|EJK48624.1| hypothetical protein THAOC_32562 [Thalassiosira oceanica]
gi|397614325|gb|EJK62729.1| hypothetical protein THAOC_16646 [Thalassiosira oceanica]
Length = 95
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S IW+ + + G + GFD+Y+NLVLDDA E
Sbjct: 7 PLELIDKAIGSP----IWILMRGQTELTGILRGFDDYVNLVLDDAVE 49
>gi|110739170|dbj|BAF01501.1| Sm-like protein [Arabidopsis thaliana]
Length = 88
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA+ Q + P LI R + SK IW+ + D + G + GFD Y+N+VL+D E
Sbjct: 1 MANNPSQLL---PSELIDRCIGSK----IWVIMKGDKELVGILKGFDVYVNMVLEDVTEY 53
Query: 61 HIKKNTRK 68
I R+
Sbjct: 54 EITAEGRR 61
>gi|15239727|ref|NP_199698.1| U6 snRNA-associated Sm-like protein LSm5 [Arabidopsis thaliana]
gi|9758886|dbj|BAB09440.1| U6 snRNA-associated Sm-like protein-like [Arabidopsis thaliana]
gi|16554971|gb|AAK61592.1| Sm-like protein [Arabidopsis thaliana]
gi|106879147|gb|ABF82603.1| At5g48870 [Arabidopsis thaliana]
gi|332008352|gb|AED95735.1| U6 snRNA-associated Sm-like protein LSm5 [Arabidopsis thaliana]
gi|386305005|gb|AFJ05005.1| hypothetical protein [Arabidopsis thaliana]
Length = 88
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA+ Q + P LI R + SK IW+ + D + G + GFD Y+N+VL+D E
Sbjct: 1 MANNPSQLL---PSELIDRCIGSK----IWVIMKGDKELVGILKGFDVYVNMVLEDVTEY 53
Query: 61 HIKKNTRK 68
I R+
Sbjct: 54 EITAEGRR 61
>gi|345567853|gb|EGX50755.1| hypothetical protein AOL_s00054g841 [Arthrobotrys oligospora ATCC
24927]
Length = 81
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ L+ + + SK IW+ + + G ++GFD+Y+N+VL+D E
Sbjct: 7 PLELVDKCVGSK----IWVVMKSEKEFSGTLVGFDDYVNMVLEDVTE 49
>gi|322835438|ref|YP_004215464.1| LysR family transcriptional regulator [Rahnella sp. Y9602]
gi|384527886|ref|YP_005419118.1| LysR family transcriptional regulator [Rahnella aquatilis HX2]
gi|321170639|gb|ADW76337.1| transcriptional regulator, LysR family [Rahnella sp. Y9602]
gi|380756624|gb|AFE61014.1| LysR family transcriptional regulator [Rahnella aquatilis HX2]
Length = 294
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 3 STKVQRIMTQPINLIFRFLQSKARIQIWLF--EQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
S QR+ P NL R Q +A + + LF E + LR+ F Y N +LD EE
Sbjct: 19 SAAAQRVHRVPSNLTTRIKQLEAELGVELFIRENQRLRLSPAGRNFLSYNNRILDLVEEA 78
Query: 61 HIKKNTRKPLGFFS 74
+ +P G F+
Sbjct: 79 RVSVAGTEPQGIFA 92
>gi|219113037|ref|XP_002186102.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582952|gb|ACI65572.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 94
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + SK IW+ + + G + GFD+Y+NLVLD+A E
Sbjct: 7 PLELIDKAIGSK----IWVLMRGTKEVVGTLQGFDDYVNLVLDNAVE 49
>gi|156544183|ref|XP_001606444.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm11-like [Nasonia
vitripennis]
Length = 225
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ ++F++++++ R++++ +R +E + FD + NL L+D E+ +K RK
Sbjct: 115 PLGVLFQYMENRIRVKVYTRNANGIRGHVEAYVAAFDRHWNLALEDCLELWTRKVKRK 172
>gi|169601618|ref|XP_001794231.1| hypothetical protein SNOG_03677 [Phaeosphaeria nodorum SN15]
gi|160705976|gb|EAT88882.2| hypothetical protein SNOG_03677 [Phaeosphaeria nodorum SN15]
Length = 86
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-IKKNTRKP 69
P+ LI + + S QIW+ G+++GFD+Y+N+VL++ E+ + N + P
Sbjct: 8 PLELIDKCVGS----QIWVIMNGGKEFTGKLVGFDDYVNMVLEEVTEIDPAEGNVKLP 61
>gi|410909464|ref|XP_003968210.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like
[Takifugu rubripes]
gi|47225103|emb|CAF98730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 88
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA+T +++ P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E
Sbjct: 1 MAATNPSQLL--PLELVDKCIGS--RIHIVM--KTDKEIVGTLLGFDDFVNMVLEDVTEF 54
Query: 61 HIKKNTRK 68
+ R+
Sbjct: 55 EVTPEGRR 62
>gi|428180050|gb|EKX48919.1| hypothetical protein GUITHDRAFT_93594 [Guillardia theta CCMP2712]
Length = 94
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKN 65
P+ LI R + S+ IW+ + D G + GFD+Y+N+VL+D E + +
Sbjct: 11 PLELIDRCIGSR----IWIILKGDKEFVGTLQGFDDYVNMVLEDVTEFEVNPD 59
>gi|392571152|gb|EIW64324.1| like-Sm ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 85
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI R + S+ IW+ + + G ++GFD+++N+VL+D E RK
Sbjct: 7 PLELIDRCIGSR----IWVIMKSEREFTGTLLGFDDFVNMVLEDVTEYEHTPQGRK 58
>gi|326922224|ref|XP_003207351.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm5-like
[Meleagris gallopavo]
gi|363730150|ref|XP_418849.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Gallus
gallus]
Length = 91
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
AST +++ P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E
Sbjct: 5 ASTNPSQLL--PLELVDKCIGS--RIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFE 58
Query: 62 IKKNTRK 68
I R+
Sbjct: 59 ITPEGRR 65
>gi|237835661|ref|XP_002367128.1| snRNP protein Lsm5, putative [Toxoplasma gondii ME49]
gi|211964792|gb|EEA99987.1| snRNP protein Lsm5, putative [Toxoplasma gondii ME49]
gi|221485337|gb|EEE23618.1| snRNP protein Lsm5, putative [Toxoplasma gondii GT1]
gi|221506198|gb|EEE31833.1| snRNP protein Lsm5, putative [Toxoplasma gondii VEG]
Length = 119
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ L+ + + S+ +W+ + D + G + GFD+++N+VLDD E
Sbjct: 26 PLALVDKCIGSR----MWIIMKGDKELAGTLRGFDDFVNMVLDDVTE 68
>gi|50546793|ref|XP_500866.1| YALI0B14058p [Yarrowia lipolytica]
gi|49646732|emb|CAG83117.1| YALI0B14058p [Yarrowia lipolytica CLIB122]
Length = 85
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
A +V +I+ P+ L+ + + SK I + + + G ++GFD+++N+VL+D EV+
Sbjct: 5 AEPQVSQIL--PLELVDKCIGSK----ILVLVKSKVEFTGTLVGFDDFVNMVLEDVTEVN 58
Query: 62 IK 63
K
Sbjct: 59 TK 60
>gi|401413338|ref|XP_003886116.1| putative snRNP protein Lsm5 [Neospora caninum Liverpool]
gi|325120536|emb|CBZ56090.1| putative snRNP protein Lsm5 [Neospora caninum Liverpool]
Length = 118
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ L+ + + S+ +W+ + D + G + GFD+++N+VLDD E
Sbjct: 25 PLALVDKCIGSR----MWIIMKGDKELAGTLRGFDDFVNMVLDDVTE 67
>gi|255953479|ref|XP_002567492.1| Pc21g04460 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589203|emb|CAP95343.1| Pc21g04460 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 83
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ IW+ + D G ++GFD+Y+N+V++D E
Sbjct: 7 PLELIDKCVGSR----IWVVMKGDKEFSGTLLGFDDYVNMVMEDVTE 49
>gi|154303271|ref|XP_001552043.1| predicted protein [Botryotinia fuckeliana B05.10]
gi|347841641|emb|CCD56213.1| similar to U6 snRNA-associated Sm-like protein LSm5 [Botryotinia
fuckeliana]
Length = 84
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + SK IW+ + D G + GFD+Y+N+VL+D E
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDKEFTGTLTGFDDYVNMVLEDVIE 49
>gi|219110255|ref|XP_002176879.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411414|gb|EEC51342.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 349
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEVHIKK 64
Q + P L++ K R+++ L +R + G ++ FD++ NL+L D EEV+ K+
Sbjct: 210 QDLQEGPFALMYNTFVHKQRVRVVLRYVNGIRGIVTGYLVAFDKHFNLILRDVEEVYSKR 269
Query: 65 NTR 67
R
Sbjct: 270 AER 272
>gi|168063950|ref|XP_001783930.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664560|gb|EDQ51275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 356
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 4 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGF----DEYMNLVLDDAEE 59
T +I P+ L+ R + +ARIQ+W +R G ++GF D++ N+VL D +E
Sbjct: 206 TIADKIRQGPLGLLVRCYEERARIQVWTRHTHGIR--GTMVGFVRALDKHFNMVLHDVDE 263
>gi|156053688|ref|XP_001592770.1| U6 snRNA-associated Sm-like protein LSm5 [Sclerotinia
sclerotiorum 1980]
gi|154703472|gb|EDO03211.1| U6 snRNA-associated Sm-like protein LSm5 [Sclerotinia
sclerotiorum 1980 UF-70]
Length = 84
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV-HIKKNTRK 68
P+ LI + + SK IW+ + D G + GFD+Y+N+VL+D E H N K
Sbjct: 7 PLELIDKCVGSK----IWVVMKGDKEFTGTLTGFDDYVNMVLEDVIEFDHQSGNQTK 59
>gi|324529784|gb|ADY49042.1| U6 snRNA-associated Sm-like protein LSm5 [Ascaris suum]
Length = 94
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
+ST P+ L+ + + S+ IW+ + + I G + GFD+Y+N+VL+D E
Sbjct: 6 SSTATNPSTLLPLELVDKCIGSR----IWVIMKGEKEIVGTLTGFDDYVNMVLEDVVE 59
>gi|85119473|ref|XP_965639.1| hypothetical protein NCU02508 [Neurospora crassa OR74A]
gi|28927451|gb|EAA36403.1| predicted protein [Neurospora crassa OR74A]
gi|336464924|gb|EGO53164.1| hypothetical protein NEUTE1DRAFT_126545 [Neurospora tetrasperma
FGSC 2508]
gi|350297029|gb|EGZ78006.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 213
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 12/70 (17%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MAST Q M IN R+++ L + + + G+++ FD++MNLVL DAEE
Sbjct: 1 MASTNKQGKMAGYINY---------RMRVTLNDGRQM--TGQMLAFDKHMNLVLADAEEF 49
Query: 61 -HIKKNTRKP 69
IK+ KP
Sbjct: 50 RRIKRRQNKP 59
>gi|452837763|gb|EME39705.1| hypothetical protein DOTSEDRAFT_75376 [Dothistroma septosporum
NZE10]
Length = 80
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI R + S IW+ + D G ++GFD+++N+VL+D E
Sbjct: 7 PLELIDRCVGSP----IWVIMKGDKEFSGTLLGFDDFVNMVLEDVTE 49
>gi|302421256|ref|XP_003008458.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261351604|gb|EEY14032.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|346974640|gb|EGY18092.1| hypothetical protein VDAG_08426 [Verticillium dahliae VdLs.17]
Length = 80
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ IW+ + D G + GFD+Y+N+VL+D E
Sbjct: 7 PLELIDKCVGSR----IWVIMKGDKEFSGTLTGFDDYVNMVLEDVTE 49
>gi|223993353|ref|XP_002286360.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977675|gb|EED96001.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 94
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S IW+ + + G + GFD+Y+NLVLDDA E
Sbjct: 7 PLELIDKAIGSP----IWILMRGQTELTGILRGFDDYVNLVLDDAVE 49
>gi|134105981|ref|XP_778001.1| hypothetical protein CNBA0080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260704|gb|EAL23354.1| hypothetical protein CNBA0080 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 216
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 10/62 (16%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MAST + P+ L+ R + S IW+ + + G ++GFD+Y+N+VL D +E
Sbjct: 1 MASTIL------PLELVDRCIGSP----IWVLMKNEREFTGTLMGFDDYVNMVLKDVKEY 50
Query: 61 HI 62
+
Sbjct: 51 EV 52
>gi|449295361|gb|EMC91383.1| hypothetical protein BAUCODRAFT_127288 [Baudoinia compniacensis
UAMH 10762]
Length = 83
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI R + S IW+ + D G ++GFD+++N+VL+D E
Sbjct: 7 PLELIDRCVGSP----IWVIMKGDKEFSGTLLGFDDFVNMVLEDVTE 49
>gi|384249954|gb|EIE23434.1| Sm-E protein [Coccomyxa subellipsoidea C-169]
Length = 95
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P LI + + SK IW+ + D ++G + GFD ++N+VL+D EE
Sbjct: 18 PSELIDKCINSK----IWVIMKGDKELQGTLRGFDVFVNMVLEDVEE 60
>gi|346325284|gb|EGX94881.1| small nuclear ribonucleoprotein [Cordyceps militaris CM01]
Length = 83
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV--HIKKNTRKP 69
P+ LI + + S+ IW+ + + G ++GFD+Y+N+VL+D E + +T+ P
Sbjct: 7 PLELIDKCVGSR----IWVIMKGEKEFSGTLVGFDDYVNMVLEDVTEFSDYTGNHTKLP 61
>gi|451848655|gb|EMD61960.1| hypothetical protein COCSADRAFT_147219 [Cochliobolus sativus
ND90Pr]
gi|451998469|gb|EMD90933.1| hypothetical protein COCHEDRAFT_1021722 [Cochliobolus
heterostrophus C5]
Length = 86
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH-IKKNTRKP 69
P+ LI + + S QIW+ G+++GFD+Y+N+VL++ E+ + N + P
Sbjct: 8 PLELIDKCVGS----QIWVIMNGGKEFTGKLVGFDDYVNMVLENVTEIDPAEGNVQLP 61
>gi|321250537|ref|XP_003191841.1| hypothetical protein CGB_B0090W [Cryptococcus gattii WM276]
gi|317458309|gb|ADV20054.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 122
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKN 65
P+ L+ R + S IW+ + + G ++GFD+Y+N+VL D +E + +
Sbjct: 7 PLELVDRCIGSP----IWVLMKNEREFTGTLMGFDDYVNMVLKDVKEYEVTAS 55
>gi|398394357|ref|XP_003850637.1| hypothetical protein MYCGRDRAFT_81468 [Zymoseptoria tritici
IPO323]
gi|339470516|gb|EGP85613.1| hypothetical protein MYCGRDRAFT_81468 [Zymoseptoria tritici
IPO323]
Length = 81
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI R + S IW+ + D G ++GFD+++N+VL+D E
Sbjct: 7 PLELIDRCVGSP----IWVIMKGDKEFSGTLLGFDDFVNMVLEDVTE 49
>gi|363748558|ref|XP_003644497.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888129|gb|AET37680.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
Length = 76
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
Query: 38 RIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK-PLG 71
++ G + G+D ++N+VLDDA EVH KN RK PLG
Sbjct: 24 KVVGVLRGYDVFLNVVLDDALEVH--KNGRKFPLG 56
>gi|254586103|ref|XP_002498619.1| ZYRO0G14696p [Zygosaccharomyces rouxii]
gi|238941513|emb|CAR29686.1| ZYRO0G14696p [Zygosaccharomyces rouxii]
Length = 86
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 29 IWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKN 65
+W+ Q + G +IGFD+++N++++DA+EV + +
Sbjct: 20 VWIVLQSNREFTGTLIGFDDFVNVIVEDAKEVTVGAD 56
>gi|58258057|ref|XP_566441.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57222578|gb|AAW40622.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 216
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MAST + P+ L+ R + S IW+ + + G ++GFD+Y+N+VL D +E
Sbjct: 1 MASTIL------PLELVDRCIGSP----IWVLMKNEREFTGTLMGFDDYVNMVLKDVKEY 50
Query: 61 HIKKN 65
+ +
Sbjct: 51 EVTAS 55
>gi|430814458|emb|CCJ28305.1| unnamed protein product [Pneumocystis jirovecii]
Length = 50
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ L+ + + S+ IW+ + D G ++GFD+Y+N+VL D E
Sbjct: 8 PLELVDKCVGSR----IWVVMKGDTEFSGILLGFDDYVNMVLQDVTE 50
>gi|453082042|gb|EMF10090.1| like-Sm ribonucleo protein [Mycosphaerella populorum SO2202]
Length = 81
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI R + S IW+ + D G ++GFD+++N+VL+D E
Sbjct: 7 PLELIDRCVGSP----IWVIMKGDKEFSGTLMGFDDFVNMVLEDVTE 49
>gi|326472938|gb|EGD96947.1| small nuclear ribonucleoprotein [Trichophyton tonsurans CBS
112818]
gi|326477364|gb|EGE01374.1| small nuclear ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 83
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 14 INLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
+ LI + + SK IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 7 VELIDKCVGSK----IWIVMKGDKEFCGTLLGFDDYVNMVLEDVTE 48
>gi|124485152|ref|YP_001029768.1| hypothetical protein Mlab_0325 [Methanocorpusculum labreanum Z]
gi|124362693|gb|ABN06501.1| Like-Sm ribonucleoprotein, core [Methanocorpusculum labreanum Z]
Length = 77
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
PI + + SK ++I + + + EGR++ DEY+NL L+ E V I N R+ +G
Sbjct: 8 PIKKVNSLVDSKISVEI---KDEGCKFEGRLVAMDEYLNLHLE--ETVEITANGRRNIG 61
>gi|348503608|ref|XP_003439356.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like isoform
1 [Oreochromis niloticus]
gi|348503610|ref|XP_003439357.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like isoform
2 [Oreochromis niloticus]
Length = 88
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M++T +++ P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E
Sbjct: 1 MSATNPSQLL--PLELVDKCIGS--RIHIVM--KTDKEIVGTLLGFDDFVNMVLEDVTEF 54
Query: 61 HIKKNTRK 68
I R+
Sbjct: 55 EITPEGRR 62
>gi|336272660|ref|XP_003351086.1| hypothetical protein SMAC_05965 [Sordaria macrospora k-hell]
Length = 189
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MAST Q M IN R + R ++ G+++ FD++MNLVL DAEE
Sbjct: 1 MASTNKQGKMAGYINYRMRVTLNDGR-----------QMTGQMLAFDKHMNLVLADAEEF 49
Query: 61 HIKKNT 66
+K T
Sbjct: 50 RQEKRT 55
>gi|159474956|ref|XP_001695589.1| Sm-E protein [Chlamydomonas reinhardtii]
gi|158275600|gb|EDP01376.1| Sm-E protein [Chlamydomonas reinhardtii]
Length = 95
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P LI R + SK +W+ + D I G + GFD Y+N+VL+D E+ +K
Sbjct: 18 PSELIDRCIGSK----MWVIMKGDKEIVGTLRGFDVYVNMVLEDVTEIEDTPEGKK 69
>gi|387915912|gb|AFK11565.1| U6 snRNA-associated Sm-like protein LSm5 [Callorhinchus milii]
Length = 90
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA T P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E
Sbjct: 1 MAVTVTNPSQLLPLELVDKCIGS--RIHIVM--KNDKEIVGTLLGFDDFVNMVLEDVTEF 56
Query: 61 HIKKNTRK 68
I R+
Sbjct: 57 EITPEGRR 64
>gi|378725612|gb|EHY52071.1| U6 snRNA-associated Sm-like protein LSm5 [Exophiala dermatitidis
NIH/UT8656]
Length = 84
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ IW+ + D G ++GFD+Y+N+VL+D E
Sbjct: 7 PLELIDKCVGSR----IWVVMKGDKDFAGTLLGFDDYVNMVLEDVIE 49
>gi|357475053|ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
Length = 98
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA T+ + + +P++LI L RI + L ++LR G++ +D+++N++L D EE+
Sbjct: 1 MAGTEEESAVKEPLDLIR--LSLDERIYVKLRSDRELR--GKLHAYDQHLNMILGDVEEI 56
>gi|118575248|ref|YP_874991.1| small nuclear ribonucleoprotein [Cenarchaeum symbiosum A]
gi|118193769|gb|ABK76687.1| small nuclear ribonucleoprotein [Cenarchaeum symbiosum A]
Length = 78
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 23/29 (79%)
Query: 39 IEGRIIGFDEYMNLVLDDAEEVHIKKNTR 67
I G ++GFD++MNL+L+ +EE+ ++ TR
Sbjct: 28 IRGNLLGFDQHMNLLLESSEEIPVEGETR 56
>gi|344302358|gb|EGW32663.1| hypothetical protein SPAPADRAFT_61726 [Spathaspora passalidarum
NRRL Y-27907]
Length = 84
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 7 QRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNT 66
+ I+ QPI L + ++ + D G++IGFD+Y+N+VL+D E+ +
Sbjct: 3 EEIVEQPI-LPLEIIDKSVGNKVKVLMTSDKEFYGKLIGFDDYVNMVLEDVVEIDNEGTK 61
Query: 67 RKPL 70
P+
Sbjct: 62 SDPV 65
>gi|344233517|gb|EGV65389.1| Sm-like ribonucleo protein [Candida tenuis ATCC 10573]
Length = 131
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 41 GRIIGFDEYMNLVLDDAEEVHIKKNT 66
G ++ FD++MNLVL D EEV I K +
Sbjct: 32 GNLLAFDKHMNLVLSDCEEVRIPKKS 57
>gi|68482073|ref|XP_715054.1| potential RNA processing complex subunit Lsm5 [Candida albicans
SC5314]
gi|46436659|gb|EAK96018.1| potential RNA processing complex subunit Lsm5 [Candida albicans
SC5314]
Length = 119
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
P+ +I R + + R+ + D G++IGFD+Y+N+VL+D EV
Sbjct: 54 PLEVIDRSVGKRVRVLM----TGDKEFNGKLIGFDDYVNMVLEDVTEV 97
>gi|452823867|gb|EME30874.1| U6 snRNA-associated Sm-like protein LSm3 [Galdieria sulphuraria]
Length = 90
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 9 IMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIK 63
++ QP++LI L + +++ + D + G++ FD++MNLVL D EE +K
Sbjct: 1 MIQQPLDLILLALDEEILVKL----RGDRELRGKLQAFDQHMNLVLSDVEETALK 51
>gi|389860536|ref|YP_006362775.1| Like-Sm ribonucleoprotein, core [Thermogladius cellulolyticus
1633]
gi|388525439|gb|AFK50637.1| Like-Sm ribonucleoprotein, core [Thermogladius cellulolyticus
1633]
Length = 76
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%)
Query: 18 FRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
++ L+ + + + ++ I G++ +D+++N+VLDDAEEV ++RK
Sbjct: 7 YKLLEENVGKIVLIKMKGEVSIRGKLRSYDQHLNIVLDDAEEVRGDGSSRK 57
>gi|218884605|ref|YP_002428987.1| Small nuclear ribonucleoprotein (snRNP)-like protein
[Desulfurococcus kamchatkensis 1221n]
gi|218766221|gb|ACL11620.1| Small nuclear ribonucleoprotein (snRNP) - like protein
[Desulfurococcus kamchatkensis 1221n]
Length = 75
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 18 FRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
+ L+ + + + ++ + G++ FD+++N+VLDDAEE+ +TRK
Sbjct: 6 HKILEENLGKHVLIKTKDNIPLRGKLRSFDQHLNIVLDDAEEILSNGSTRK 56
>gi|67601363|ref|XP_666392.1| U6 snRNA associated SM-like protein LSM5 [Cryptosporidium hominis
TU502]
gi|54657379|gb|EAL36161.1| U6 snRNA associated SM-like protein LSM5 [Cryptosporidium
hominis]
Length = 115
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIK 63
P+ LI + + ++ I++ + D G + GFDEY+N+VLDD +E K
Sbjct: 23 PLALIDKCIGNR----IYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFK 69
>gi|392341168|ref|XP_003754272.1| PREDICTED: hypothetical protein LOC685221 [Rattus norvegicus]
gi|392348953|ref|XP_002729703.2| PREDICTED: hypothetical protein LOC685221 [Rattus norvegicus]
Length = 94
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLR-IEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + K+++ I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIPIVMKSDKEIKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 68
>gi|405956996|gb|EKC23235.1| U7 snRNA-associated Sm-like protein LSm11 [Crassostrea gigas]
Length = 338
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 4 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEEVH 61
T+++ + P++++ R + + IQ+W+ DLR +G ++ FD++ NL + D +E++
Sbjct: 138 TRMEGYVRGPLSVLQRCVTERLLIQVWIRSAVDLRGMCKGYLVAFDKHFNLAMIDVDELY 197
>gi|197129592|gb|ACH46090.1| putative u6 snRNA-associated Sm-like protein [Taeniopygia
guttata]
Length = 91
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D +I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIHIVM--KSDKQIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
>gi|6912488|ref|NP_036454.1| U6 snRNA-associated Sm-like protein LSm5 isoform a [Homo sapiens]
gi|13384942|ref|NP_079796.1| U6 snRNA-associated Sm-like protein LSm5 [Mus musculus]
gi|114053307|ref|NP_001040018.1| U6 snRNA-associated Sm-like protein LSm5 [Bos taurus]
gi|157822947|ref|NP_001100759.1| U6 snRNA-associated Sm-like protein LSm5 [Rattus norvegicus]
gi|197101673|ref|NP_001126628.1| U6 snRNA-associated Sm-like protein LSm5 [Pongo abelii]
gi|383873354|ref|NP_001244745.1| U6 snRNA-associated Sm-like protein LSm5 [Macaca mulatta]
gi|55628382|ref|XP_519030.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform 3
[Pan troglodytes]
gi|73976577|ref|XP_854477.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Canis lupus
familiaris]
gi|149705702|ref|XP_001500867.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm5-like [Equus
caballus]
gi|291394638|ref|XP_002713789.1| PREDICTED: LSM5 homolog, U6 small nuclear RNA associated
[Oryctolagus cuniculus]
gi|296209016|ref|XP_002751358.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like
[Callithrix jacchus]
gi|301772952|ref|XP_002921890.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm5-like
[Ailuropoda melanoleuca]
gi|332242762|ref|XP_003270553.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform 1
[Nomascus leucogenys]
gi|335305486|ref|XP_003360223.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Sus
scrofa]
gi|344270397|ref|XP_003407031.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like
[Loxodonta africana]
gi|348568734|ref|XP_003470153.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cavia
porcellus]
gi|395831025|ref|XP_003788612.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like
[Otolemur garnettii]
gi|397527112|ref|XP_003833447.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Pan
paniscus]
gi|402863784|ref|XP_003896179.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like isoform
1 [Papio anubis]
gi|403278350|ref|XP_003930776.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Saimiri
boliviensis boliviensis]
gi|407262510|ref|XP_003946397.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Mus
musculus]
gi|410952602|ref|XP_003982968.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Felis catus]
gi|426227726|ref|XP_004007967.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Ovis aries]
gi|426355879|ref|XP_004045331.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like isoform
1 [Gorilla gorilla gorilla]
gi|426355881|ref|XP_004045332.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like isoform
2 [Gorilla gorilla gorilla]
gi|10720081|sp|Q9Y4Y9.3|LSM5_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm5
gi|52783752|sp|P62322.2|LSM5_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm5
gi|75054789|sp|Q5R628.3|LSM5_PONAB RecName: Full=U6 snRNA-associated Sm-like protein LSm5
gi|116256439|sp|Q2HJH0.3|LSM5_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm5
gi|5919151|gb|AAD56229.1|AF182291_1 U6 snRNA-associated Sm-like protein LSm5 [Homo sapiens]
gi|5262860|emb|CAB45868.1| Lsm5 protein [Homo sapiens]
gi|12844520|dbj|BAB26394.1| unnamed protein product [Mus musculus]
gi|12847199|dbj|BAB27475.1| unnamed protein product [Mus musculus]
gi|13543565|gb|AAH05938.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|38512042|gb|AAH61085.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|51105856|gb|EAL24440.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|55732167|emb|CAH92788.1| hypothetical protein [Pongo abelii]
gi|55930921|gb|AAH48459.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|88682880|gb|AAI05405.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|119614397|gb|EAW93991.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
gi|124376122|gb|AAI32627.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|124376508|gb|AAI32629.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|148672763|gb|EDL04710.1| mCG13108, isoform CRA_a [Mus musculus]
gi|149033255|gb|EDL88056.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_c [Rattus norvegicus]
gi|208966684|dbj|BAG73356.1| LSM5 homolog, U6 small nuclear RNA associated [synthetic
construct]
gi|296488471|tpg|DAA30584.1| TPA: U6 snRNA-associated Sm-like protein LSm5 [Bos taurus]
gi|312153290|gb|ADQ33157.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|355560708|gb|EHH17394.1| U6 snRNA-associated Sm-like protein LSm5 [Macaca mulatta]
gi|380811262|gb|AFE77506.1| U6 snRNA-associated Sm-like protein LSm5 isoform a [Macaca
mulatta]
gi|383417167|gb|AFH31797.1| U6 snRNA-associated Sm-like protein LSm5 isoform a [Macaca
mulatta]
gi|384941550|gb|AFI34380.1| U6 snRNA-associated Sm-like protein LSm5 isoform a [Macaca
mulatta]
gi|410223678|gb|JAA09058.1| LSM5 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410255044|gb|JAA15489.1| LSM5 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410354065|gb|JAA43636.1| LSM5 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|417395572|gb|JAA44840.1| Putative u6 snrna-associated sm-like protein [Desmodus rotundus]
gi|440911522|gb|ELR61182.1| U6 snRNA-associated Sm-like protein LSm5 [Bos grunniens mutus]
Length = 91
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
A+T +++ P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E
Sbjct: 5 ATTNPSQLL--PLELVDKCIGS--RIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFE 58
Query: 62 IKKNTRK 68
I R+
Sbjct: 59 ITPEGRR 65
>gi|337284247|ref|YP_004623721.1| small nuclear ribonucleoprotein [Pyrococcus yayanosii CH1]
gi|334900181|gb|AEH24449.1| small nuclear ribonucleoprotein [Pyrococcus yayanosii CH1]
Length = 82
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAE 58
M S +R+ +P+++I R L + + +K G++IG+D ++N+VL DAE
Sbjct: 1 MKSKGGRRMAERPLDVIHRSLDK----DVLVILKKGFEFRGKLIGYDIHLNVVLADAE 54
>gi|66363282|ref|XP_628607.1| U6 snRNA-associated Sm-like protein LSm5. SM domain
[Cryptosporidium parvum Iowa II]
gi|90109709|pdb|2FWK|A Chain A, Crystal Structure Of Cryptosporidium Parvum U6 Snrna-
Associated Sm-Like Protein Lsm5
gi|90109710|pdb|2FWK|B Chain B, Crystal Structure Of Cryptosporidium Parvum U6 Snrna-
Associated Sm-Like Protein Lsm5
gi|321159967|pdb|3PGG|A Chain A, Crystal Structure Of Cryptosporidium Parvum U6
Snrna-Associated Sm- Like Protein Lsm5
gi|321159968|pdb|3PGG|B Chain B, Crystal Structure Of Cryptosporidium Parvum U6
Snrna-Associated Sm- Like Protein Lsm5
gi|46229827|gb|EAK90645.1| U6 snRNA-associated Sm-like protein LSm5. SM domain
[Cryptosporidium parvum Iowa II]
Length = 121
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIK 63
P+ LI + + ++ I++ + D G + GFDEY+N+VLDD +E K
Sbjct: 29 PLALIDKCIGNR----IYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFK 75
>gi|126336758|ref|XP_001371876.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm5-like
[Monodelphis domestica]
Length = 166
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
A+T +++ P+ L+ + + S+ I + + D I G ++GFD+++N+VL+D E
Sbjct: 5 ATTNPSQLL--PLELVDKCIGSRIHIVM----KSDKEIVGTLLGFDDFVNMVLEDVTEFE 58
Query: 62 IKKNTRK 68
I R+
Sbjct: 59 ITPEGRR 65
>gi|403333765|gb|EJY66003.1| U6 small nuclear ribonucleoprotein E, putative [Oxytricha
trifallax]
Length = 81
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 28 QIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
++W+ Q D G + GFD Y NL+LDD +E
Sbjct: 9 RVWIIMQNDKEFSGTLRGFDGYFNLILDDVKE 40
>gi|344228576|gb|EGV60462.1| hypothetical protein CANTEDRAFT_116517 [Candida tenuis ATCC
10573]
Length = 97
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 41 GRIIGFDEYMNLVLDDAEEVHIKKNTRKPL 70
G+++GFD+++N+VL+D E + NT P+
Sbjct: 50 GKLVGFDDFVNVVLEDVTETDSEGNTDGPV 79
>gi|124028416|ref|YP_001013736.1| putative snRNP Sm protein [Hyperthermus butylicus DSM 5456]
gi|123979110|gb|ABM81391.1| putative snRNP Sm protein [Hyperthermus butylicus DSM 5456]
Length = 77
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 39 IEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
+ GR+ +D+++NLVL+DAEE++ TRK
Sbjct: 27 VRGRLKSYDQHLNLVLEDAEEIYEDGRTRK 56
>gi|449283162|gb|EMC89854.1| U6 snRNA-associated Sm-like protein LSm5, partial [Columba livia]
Length = 82
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
A+T +++ P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E
Sbjct: 5 ATTNPSQLL--PLELVDKCIGS--RIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFE 58
Query: 62 IKKNTRK 68
I R+
Sbjct: 59 IPPEGRR 65
>gi|119614396|gb|EAW93990.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
Length = 85
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 2 ASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVH 61
A+T +++ P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E
Sbjct: 5 ATTNPSQLL--PLELVDKCIGS--RIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFE 58
Query: 62 IKKNTRK 68
I R+
Sbjct: 59 ITPEGRR 65
>gi|391336578|ref|XP_003742656.1| PREDICTED: uncharacterized protein LOC100908975 [Metaseiulus
occidentalis]
Length = 406
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLR--IEGRIIGFDEYMNLVLDDAEE 59
PI+++ + L +K R+++W+ +R + G + FD+++NL L D +E
Sbjct: 127 PISILHKALTNKLRVKVWVRSHSTVRSILTGFVAAFDKHLNLALVDVDE 175
>gi|350539912|ref|NP_001232310.1| putative u6 snRNA-associated Sm-like protein [Taeniopygia
guttata]
gi|197129593|gb|ACH46091.1| putative u6 snRNA-associated Sm-like protein [Taeniopygia
guttata]
gi|197129594|gb|ACH46092.1| putative u6 snRNA-associated Sm-like protein [Taeniopygia
guttata]
gi|197129595|gb|ACH46093.1| putative u6 snRNA-associated Sm-like protein [Taeniopygia
guttata]
gi|197129831|gb|ACH46329.1| putative u6 snRNA-associated Sm-like protein [Taeniopygia
guttata]
gi|197129908|gb|ACH46406.1| putative u6 snRNA-associated Sm-like protein [Taeniopygia
guttata]
Length = 91
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
>gi|213982795|ref|NP_001135569.1| U6 snRNA-associated Sm-like protein LSm5 [Xenopus (Silurana)
tropicalis]
gi|195539827|gb|AAI68072.1| Unknown (protein for MGC:185877) [Xenopus (Silurana) tropicalis]
Length = 91
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
>gi|391338472|ref|XP_003743582.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like
[Metaseiulus occidentalis]
Length = 83
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S RI I + K+L G ++GFD+Y+N+VL+D E + R+
Sbjct: 6 PLELIDKCIGS--RIHIIMKNDKELV--GTLLGFDDYVNMVLEDVTEYENSSDGRR 57
>gi|313213177|emb|CBY37031.1| unnamed protein product [Oikopleura dioica]
gi|313226437|emb|CBY21582.1| unnamed protein product [Oikopleura dioica]
Length = 86
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFDE++N+VL+D E + +K
Sbjct: 7 PLELVDKCIGS--RIHIIM--RNDKEIVGTLLGFDEFVNMVLEDVTEYEATSDGKK 58
>gi|405117379|gb|AFR92154.1| hypothetical protein CNAG_00016 [Cryptococcus neoformans var.
grubii H99]
Length = 49
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
MAST + P+ L+ R + S IW+ + + G ++GFD+Y+N+VL D +E
Sbjct: 1 MASTIL------PLELVDRCIGSP----IWVLMKNEREFTGTLMGFDDYVNMVLKDVKE 49
>gi|147901169|ref|NP_001087187.1| U6 snRNA-associated Sm-like protein LSm5 [Xenopus laevis]
gi|51873770|gb|AAH78466.1| MGC85219 protein [Xenopus laevis]
Length = 91
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
>gi|393247655|gb|EJD55162.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 85
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI R + S+ IW+ + + G ++GFD+++N+VL+D E
Sbjct: 7 PLELIDRCIGSR----IWVVMKTEREFTGTLLGFDDFVNMVLEDVTE 49
>gi|359477805|ref|XP_003632024.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform 2
[Vitis vinifera]
Length = 88
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P LI R + SK IW+ + D + G + GFD Y+N+VL+D E
Sbjct: 10 PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTE 52
>gi|344231234|gb|EGV63116.1| LSM-domain-containing protein [Candida tenuis ATCC 10573]
Length = 88
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MA + Q+ +P++LI R+ Q + + L ++++ G++ G+D + N+VL DA E
Sbjct: 1 MADVQPQQKQEEPLDLI-RY-QLDETVLVKLRGAREMK--GKLQGYDSHCNMVLSDATEY 56
Query: 61 HIKKNTRKPLG 71
+N KP G
Sbjct: 57 IYAENQDKPQG 67
>gi|261245080|ref|NP_001140132.1| U6 snRNA-associated Sm-like protein LSm5 [Salmo salar]
gi|221220780|gb|ACM09051.1| U6 snRNA-associated Sm-like protein LSm5 [Salmo salar]
gi|221222120|gb|ACM09721.1| U6 snRNA-associated Sm-like protein LSm5 [Salmo salar]
gi|225715330|gb|ACO13511.1| U6 snRNA-associated Sm-like protein LSm5 [Esox lucius]
Length = 91
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIHIVM--KNDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
>gi|390178194|ref|XP_002137483.2| GA30187 [Drosophila pseudoobscura pseudoobscura]
gi|388859360|gb|EDY68041.2| GA30187 [Drosophila pseudoobscura pseudoobscura]
Length = 100
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 1 MASTKVQRIMT--QPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAE 58
MA+ + Q I+ +P++LI L K +++ +++LR GR+ FD+++N+VL DAE
Sbjct: 1 MATEEEQVILPVKEPLDLIRLSLDEKVYVKMR--NERELR--GRLHAFDQHLNMVLGDAE 56
Query: 59 E 59
E
Sbjct: 57 E 57
>gi|313240518|emb|CBY32850.1| unnamed protein product [Oikopleura dioica]
Length = 86
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFDE++N+VL+D E + +K
Sbjct: 7 PLELVDKCIGS--RIHIIM--RNDKEIVGTLLGFDEFVNMVLEDVTEYEATSDGKK 58
>gi|229366148|gb|ACQ58054.1| U6 snRNA-associated Sm-like protein LSm5 [Anoplopoma fimbria]
Length = 91
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIHIVM--KTDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
>gi|281208052|gb|EFA82230.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 86
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPL 70
P+ LI + + S+ IW+ + D G ++GFD Y+N+ L D E KP+
Sbjct: 8 PLELIEKCIGSR----IWICMKNDKEFVGTLLGFDTYVNIFLKDVTEYEFTPEGIKPI 61
>gi|317420150|emb|CBN82186.1| U6 snRNA-associated Sm-like protein LSm5 [Dicentrarchus labrax]
Length = 91
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIHIVM--KTDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
>gi|301630685|ref|XP_002944447.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm5-like, partial
[Xenopus (Silurana) tropicalis]
Length = 81
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
>gi|154426284|ref|NP_001093908.1| U6 snRNA-associated Sm-like protein LSm5 [Danio rerio]
gi|152012711|gb|AAI50415.1| Zgc:171959 protein [Danio rerio]
Length = 91
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIHIVM--KNDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
>gi|170593543|ref|XP_001901523.1| U6 snRNA-associated Sm-like protein LSm5 [Brugia malayi]
gi|312071704|ref|XP_003138731.1| hypothetical protein LOAG_03146 [Loa loa]
gi|158590467|gb|EDP29082.1| U6 snRNA-associated Sm-like protein LSm5, putative [Brugia
malayi]
gi|402593447|gb|EJW87374.1| small nuclear ribonucleoprotein [Wuchereria bancrofti]
Length = 91
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ L+ + + S+ IW+ + + I G + GFD+Y+N+VL+D E
Sbjct: 14 PLELVDKCIGSR----IWVIMKGEKEIVGTLTGFDDYVNMVLEDVVE 56
>gi|393912158|gb|EFO25335.2| hypothetical protein LOAG_03146 [Loa loa]
Length = 111
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ L+ + + S+ IW+ + + I G + GFD+Y+N+VL+D E
Sbjct: 34 PLELVDKCIGSR----IWVIMKGEKEIVGTLTGFDDYVNMVLEDVVE 76
>gi|347522771|ref|YP_004780341.1| Like-Sm ribonucleoprotein core [Pyrolobus fumarii 1A]
gi|343459653|gb|AEM38089.1| Like-Sm ribonucleoprotein core [Pyrolobus fumarii 1A]
Length = 75
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 36 DLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
D+ + G++ FD+++NLVL++AEE+ +TRK
Sbjct: 24 DIVVRGKLKSFDQHLNLVLEEAEEIKSDGSTRK 56
>gi|432929710|ref|XP_004081239.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Oryzias
latipes]
Length = 91
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIHIVM--KTDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
>gi|302837345|ref|XP_002950232.1| hypothetical protein VOLCADRAFT_109070 [Volvox carteri f.
nagariensis]
gi|300264705|gb|EFJ48900.1| hypothetical protein VOLCADRAFT_109070 [Volvox carteri f.
nagariensis]
Length = 95
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P LI R + S+ +W+ + D I G + GFD Y+N+VL+D E+ +K
Sbjct: 18 PSELIDRCIGSR----MWVIMKGDKEIVGTLRGFDVYVNMVLEDVTEIEDSPEGKK 69
>gi|254564981|ref|XP_002489601.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029397|emb|CAY67320.1| Hypothetical protein PAS_chr1-3_0256 [Komagataella pastoris
GS115]
gi|328350024|emb|CCA36424.1| Probable U6 snRNA-associated Sm-like protein LSm5 [Komagataella
pastoris CBS 7435]
Length = 79
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ L+ + + S+ RI + D EG ++GFDE++N++L D E
Sbjct: 12 PLELVDKAIGSQVRILLI----NDREFEGTLVGFDEFVNVILSDVTE 54
>gi|193890979|gb|ACF28643.1| small nuclear ribonucleoprotein E [Amphidinium carterae]
Length = 82
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 28 QIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
+IW+ + D + G + GFD+Y+N+VLDD E +K
Sbjct: 11 RIWVIMKGDKELVGTLRGFDDYVNMVLDDVREYTFTPEGKK 51
>gi|149025174|gb|EDL81541.1| rCG64141 [Rattus norvegicus]
Length = 94
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDL-RIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + K++ I G ++GFD+++N+VL+D E I R+
Sbjct: 14 PLELVDKCIGS--RIPIVMKSDKEIVEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 68
>gi|356534803|ref|XP_003535941.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm3-like
isoform 1 [Glycine max]
Length = 97
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MAS + + + +P+NLI+ L RI + L ++LR G++ +D+++N+VL D EE+
Sbjct: 1 MASEE-ESAVKEPLNLIW--LSLDERIYVKLRSDRELR--GKLHAYDQHLNIVLGDVEEI 55
>gi|50425663|ref|XP_461428.1| DEHA2F25036p [Debaryomyces hansenii CBS767]
gi|49657097|emb|CAG89843.1| DEHA2F25036p [Debaryomyces hansenii CBS767]
Length = 93
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Query: 26 RIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
+IQ+ + K+ + G +IGFD+Y+N+VL++ EE
Sbjct: 34 KIQVLMTNDKEFK--GTLIGFDDYVNMVLENVEE 65
>gi|403216098|emb|CCK70596.1| hypothetical protein KNAG_0E03380 [Kazachstania naganishii CBS
8797]
Length = 77
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 19 RFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLG 71
R++ K +QI ++ G + GFD ++N+VLDDA E+ ++ PLG
Sbjct: 9 RYMDKKVVLQI----NGSRKVAGTMRGFDLFLNVVLDDAVELLQEEGKTSPLG 57
>gi|313215037|emb|CBY41217.1| unnamed protein product [Oikopleura dioica]
Length = 69
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ L+ + + S RI I + + D I G ++GFDE++N+VL+D E + +K
Sbjct: 7 PLELVDKCIGS--RIHIIM--RNDKEIVGTLLGFDEFVNMVLEDVTEYEATSDGKK 58
>gi|388579402|gb|EIM19726.1| LSM-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 87
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKN 65
P+ LI + + S+ IW+ + + G + GFD+++N+VLDD E I +
Sbjct: 7 PLELIDKCIGSR----IWVIMKNEREFVGTLQGFDDFVNMVLDDVTEYDISPD 55
>gi|390981167|pdb|4EMK|A Chain A, Crystal Structure Of Splsm567
Length = 94
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S +W+ + + G ++GFD+Y+N+VL D E
Sbjct: 21 PLELIDKCIGS----NLWVIXKSEREFAGTLVGFDDYVNIVLKDVTE 63
>gi|213403610|ref|XP_002172577.1| U6 snRNP-associated protein Lsm5 [Schizosaccharomyces japonicus
yFS275]
gi|212000624|gb|EEB06284.1| U6 snRNP-associated protein Lsm5 [Schizosaccharomyces japonicus
yFS275]
Length = 79
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + S +W+ + + G ++GFD+Y+N+VL D E+ N +
Sbjct: 7 PLELIDKCIGS----NLWVIMKGEKEFVGTLVGFDDYVNMVLKDVTEIDTITNVTE 58
>gi|167043902|gb|ABZ08590.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG3H9]
gi|167044597|gb|ABZ09270.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG7F11]
Length = 76
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 39 IEGRIIGFDEYMNLVLDDAEEV 60
I G ++GFD++MNL+LD AEE+
Sbjct: 28 IRGNLLGFDQHMNLLLDQAEEI 49
>gi|91087977|ref|XP_973274.1| PREDICTED: similar to LSM Sm-like protein family member
[Tribolium castaneum]
gi|270011905|gb|EFA08353.1| hypothetical protein TcasGA2_TC005996 [Tribolium castaneum]
Length = 101
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 12 QPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
+P++L+ L + I++ + D I GR+ +D++MN++L DAEE
Sbjct: 15 EPLDLVRLSLDER----IYVKMRNDREIRGRLHAYDQHMNMILSDAEE 58
>gi|346470761|gb|AEO35225.1| hypothetical protein [Amblyomma maculatum]
Length = 90
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
M+ + V P+ LI + + SK I + + D I G ++GFD+++N+VL+D E
Sbjct: 1 MSLSAVNPSSLLPLELIDKCIGSK----IHIIMKSDKEIVGTLLGFDDFVNMVLEDVTEY 56
Query: 61 HIKKNTRK 68
R+
Sbjct: 57 ESTPEGRR 64
>gi|448534872|ref|XP_003870851.1| hypothetical protein CORT_0G00330 [Candida orthopsilosis Co
90-125]
gi|380355207|emb|CCG24723.1| hypothetical protein CORT_0G00330 [Candida orthopsilosis]
Length = 96
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDA 57
P+ +I R + K RI + K+ R G +IGFD+Y+N+VL+D
Sbjct: 20 PLEVIDRSIGKKVRI--LMTSDKEFR--GTLIGFDDYVNMVLEDV 60
>gi|354459632|pdb|3SWN|A Chain A, Structure Of The Lsm657 Complex: An Assembly
Intermediate Of The Lsm1 7 And Lsm2 8 Rings
gi|354459635|pdb|3SWN|D Chain D, Structure Of The Lsm657 Complex: An Assembly
Intermediate Of The Lsm1 7 And Lsm2 8 Rings
gi|354459638|pdb|3SWN|P Chain P, Structure Of The Lsm657 Complex: An Assembly
Intermediate Of The Lsm1 7 And Lsm2 8 Rings
gi|354459641|pdb|3SWN|S Chain S, Structure Of The Lsm657 Complex: An Assembly
Intermediate Of The Lsm1 7 And Lsm2 8 Rings
Length = 82
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S +W+ + + G ++GFD+Y+N+VL D E
Sbjct: 9 PLELIDKCIGS----NLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 51
>gi|388852751|emb|CCF53669.1| probable SMX2-snRNP G protein [Ustilago hordei]
Length = 87
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 19 RFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDA-EEVH 61
RFL + + I Q +I+G + GFD ++NLV+DDA E+VH
Sbjct: 11 RFLDKRIAVNI----QGGRKIQGTLRGFDMFLNLVVDDAIEQVH 50
>gi|357126029|ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform
1 [Brachypodium distachyon]
Length = 98
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
MAS + + + +P++LI L RI + L ++LR G++ +D+++N++L D EE+
Sbjct: 1 MASAEEEIAVKEPLDLIR--LSLDERIYVKLRSDRELR--GKLHAYDQHLNMILGDVEEI 56
>gi|19113165|ref|NP_596373.1| U6 snRNP-associated protein Lsm5 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74626712|sp|O42978.2|LSM5_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm5
gi|4539252|emb|CAA16849.2| U6 snRNP-associated protein Lsm5 (predicted) [Schizosaccharomyces
pombe]
Length = 80
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S +W+ + + G ++GFD+Y+N+VL D E
Sbjct: 7 PLELIDKCIGS----NLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 49
>gi|452980574|gb|EME80335.1| hypothetical protein MYCFIDRAFT_89886 [Pseudocercospora fijiensis
CIRAD86]
Length = 81
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE-----VHIKKN 65
P+ LI R + S IW+ + D G + GFD+++N+VL+D E H K N
Sbjct: 7 PLELIDRCVGSP----IWVIMKGDKEFSGTLQGFDDFVNMVLEDVTEYDYTGAHTKLN 60
>gi|427785997|gb|JAA58450.1| Putative u6 snrna-associated sm-like protein [Rhipicephalus
pulchellus]
Length = 90
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + SK I + + D I G ++GFD+++N+VL+D E R+
Sbjct: 13 PLELIDKCIGSK----IHIIMKSDKEIVGTLLGFDDFVNMVLEDVTEYESTPEGRR 64
>gi|320592276|gb|EFX04715.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 80
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
P+ LI + + S+ IW+ + + G ++GFD+Y+N+VL++ E
Sbjct: 7 PLELIDKCVGSR----IWVIMKGEREFSGTLVGFDDYVNMVLEEVTE 49
>gi|170029969|ref|XP_001842863.1| snrnp sm protein [Culex quinquefasciatus]
gi|167865323|gb|EDS28706.1| snrnp sm protein [Culex quinquefasciatus]
Length = 101
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 12 QPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE 59
+P++LI L K I + + +++LR GR+ FD+++N+VL DAEE
Sbjct: 14 EPLDLIRLSLDEK--IYVKMRNERELR--GRLHAFDQHLNMVLGDAEE 57
>gi|297527485|ref|YP_003669509.1| hypothetical protein Shell_1522 [Staphylothermus hellenicus DSM
12710]
gi|297256401|gb|ADI32610.1| Like-Sm ribonucleoprotein core [Staphylothermus hellenicus DSM
12710]
Length = 75
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 39 IEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
+ G++ +D+++N+VLDDAEE+ +TRK
Sbjct: 27 VRGKLKSYDQHLNIVLDDAEEIRENGSTRK 56
>gi|442748493|gb|JAA66406.1| Putative u6 snrna-associated sm-like protein [Ixodes ricinus]
Length = 90
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 13 PINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRK 68
P+ LI + + SK I + + D I G ++GFD+++N+VL+D E R+
Sbjct: 13 PLELIDKCIGSK----IHIIMKSDKEIVGTLLGFDDFVNMVLEDVTEYESTPEGRR 64
>gi|328853199|gb|EGG02339.1| hypothetical protein MELLADRAFT_75479 [Melampsora larici-populina
98AG31]
Length = 78
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 31/45 (68%)
Query: 28 QIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGF 72
+++L Q + ++ G + GFD ++NLVLD+A+E +++ ++ +G
Sbjct: 16 RLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQEENLEGGEKRKMGL 60
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.140 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,077,424,586
Number of Sequences: 23463169
Number of extensions: 35041674
Number of successful extensions: 94916
Number of sequences better than 100.0: 656
Number of HSP's better than 100.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 94349
Number of HSP's gapped (non-prelim): 658
length of query: 78
length of database: 8,064,228,071
effective HSP length: 49
effective length of query: 29
effective length of database: 6,914,532,790
effective search space: 200521450910
effective search space used: 200521450910
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)