BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034948
         (78 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O64818|Y2309_ARATH Uncharacterized protein At2g23090 OS=Arabidopsis thaliana
          GN=At2g23090 PE=1 SV=1
          Length = 78

 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/78 (85%), Positives = 71/78 (91%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGN QK+ MAR KNLEK KAA KGSQLE NKKAMSIQCKVCMQTF+CTTSEVKCREHA
Sbjct: 1  MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLKK 78
          EAKHPK+D+ ACFPHLKK
Sbjct: 61 EAKHPKADVVACFPHLKK 78


>sp|P27783|NIA_BETPN Nitrate reductase [NAD(P)H] OS=Betula pendula GN=NIA1 PE=2 SV=1
          Length = 898

 Score = 31.6 bits (70), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 4   GNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAK 63
           GN     MAREKNLE    AN+  +   +   M+   K      M + SEVK    AE+ 
Sbjct: 492 GNESGGWMAREKNLETSSDANQSLKKSVSSPFMNTSSK------MFSMSEVKKHNSAESA 545

Query: 64  H--PKSDIYACFPHLK 77
                  IY C   LK
Sbjct: 546 WIIVHGHIYDCTHFLK 561


>sp|Q8R2X8|GO45_MOUSE Golgin-45 OS=Mus musculus GN=Blzf1 PE=2 SV=2
          Length = 403

 Score = 30.0 bits (66), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 10  KMAREKN---LEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCT 50
           ++AREKN   LE +      +QL    + MSIQC V    F+ +
Sbjct: 182 RLAREKNQLILENEALGRNTAQLSEQLERMSIQCDVWRSKFLAS 225


>sp|Q9H2G9|GO45_HUMAN Golgin-45 OS=Homo sapiens GN=BLZF1 PE=1 SV=2
          Length = 400

 Score = 30.0 bits (66), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 10  KMAREKN---LEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCT 50
           ++AREKN   LE +      +QL    + MSIQC V    F+ +
Sbjct: 179 RLAREKNQLILENEALGRNTAQLSEQLERMSIQCDVWRSKFLAS 222


>sp|Q9LZR5|HDT3_ARATH Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3 PE=1 SV=2
          Length = 294

 Score = 29.3 bits (64), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)

Query: 28  QLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKH 64
           Q +T K A +  CK C +TF   TSE+  + H +AKH
Sbjct: 257 QQQTPKSAGAFGCKSCTRTF---TSEMGLQSHTKAKH 290


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.124    0.367 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,974,016
Number of Sequences: 539616
Number of extensions: 753628
Number of successful extensions: 2681
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2680
Number of HSP's gapped (non-prelim): 11
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)