Query 034952
Match_columns 78
No_of_seqs 134 out of 1180
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 13:00:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034952.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034952hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dy0_A APRT, adenine phosphori 99.6 9.9E-16 3.4E-20 103.7 9.3 71 3-76 98-168 (190)
2 1g2q_A Adenine phosphoribosylt 99.6 2.4E-15 8.1E-20 101.7 10.4 70 4-76 95-164 (187)
3 1qb7_A APRT, adenine phosphori 99.6 4.3E-15 1.5E-19 104.4 7.3 70 4-76 107-180 (236)
4 1zn8_A APRT, adenine phosphori 99.6 2.1E-14 7.2E-19 96.0 9.3 70 4-76 93-162 (180)
5 1l1q_A Adenine phosphoribosylt 99.6 1.2E-14 4.1E-19 98.3 8.0 70 4-76 89-161 (186)
6 1y0b_A Xanthine phosphoribosyl 99.4 1.1E-12 3.9E-17 88.6 10.1 55 19-76 108-162 (197)
7 1o57_A PUR operon repressor; p 99.4 9.5E-13 3.2E-17 95.4 9.4 70 4-76 167-238 (291)
8 2ps1_A Orotate phosphoribosylt 99.4 3.7E-12 1.3E-16 88.6 9.1 61 11-76 107-167 (226)
9 1vch_A Phosphoribosyltransfera 99.3 2.3E-12 8E-17 85.4 6.6 53 20-75 107-161 (175)
10 2p1z_A Phosphoribosyltransfera 99.3 5.4E-12 1.8E-16 85.0 7.8 59 11-75 96-155 (180)
11 1vdm_A Purine phosphoribosyltr 99.3 1.1E-11 3.9E-16 80.4 8.4 52 21-75 73-124 (153)
12 3mjd_A Orotate phosphoribosylt 99.3 6.9E-12 2.4E-16 88.8 7.6 60 10-75 117-177 (232)
13 2yzk_A OPRT, oprtase, orotate 99.2 1.2E-11 4.1E-16 83.1 6.4 43 30-75 105-147 (178)
14 3ozf_A Hypoxanthine-guanine-xa 99.2 4.5E-11 1.5E-15 85.6 9.4 63 10-75 133-197 (250)
15 2wns_A Orotate phosphoribosylt 99.2 8.3E-12 2.8E-16 85.7 4.9 56 14-74 96-151 (205)
16 3m3h_A OPRT, oprtase, orotate 99.2 3.2E-11 1.1E-15 85.3 8.0 57 13-74 121-177 (234)
17 3n2l_A OPRT, oprtase, orotate 99.2 3.7E-11 1.3E-15 85.5 7.7 59 10-75 124-183 (238)
18 3dez_A OPRT, oprtase, orotate 99.2 4.9E-11 1.7E-15 84.9 7.7 57 13-74 133-189 (243)
19 1a3c_A PYRR, pyrimidine operon 99.2 2.6E-11 8.8E-16 80.8 5.9 43 29-74 96-139 (181)
20 1hgx_A HGXPRTASE, hypoxanthine 99.2 4.8E-11 1.6E-15 80.0 7.1 45 28-75 92-136 (183)
21 1fsg_A HGPRTASE, hypoxanthine- 99.2 1.2E-10 4E-15 81.6 9.0 62 11-75 120-183 (233)
22 2geb_A Hypoxanthine-guanine ph 99.2 5.6E-11 1.9E-15 80.1 7.1 44 28-74 95-138 (185)
23 1lh0_A OMP synthase; loop clos 99.2 2.7E-11 9.1E-16 83.7 5.4 45 27-75 114-158 (213)
24 1ufr_A TT1027, PYR mRNA-bindin 99.2 3.7E-11 1.3E-15 80.3 5.8 43 29-74 94-137 (181)
25 1yfz_A Hypoxanthine-guanine ph 99.2 8.1E-11 2.8E-15 80.4 7.1 44 28-74 115-158 (205)
26 2aee_A OPRT, oprtase, orotate 99.1 8.8E-11 3E-15 80.5 6.6 46 26-74 112-157 (211)
27 1pzm_A HGPRT, hypoxanthine-gua 99.1 6.5E-11 2.2E-15 81.8 5.6 44 29-75 116-159 (211)
28 1w30_A PYRR bifunctional prote 99.1 7.9E-11 2.7E-15 80.8 5.8 43 29-74 110-153 (201)
29 2ywu_A Hypoxanthine-guanine ph 99.1 1.7E-10 5.6E-15 78.4 6.6 44 29-75 93-136 (181)
30 1tc1_A Protein (hypoxanthine p 99.1 1.4E-10 4.7E-15 81.0 6.1 44 29-75 101-144 (220)
31 3qw4_B UMP synthase; N-termina 99.1 1.1E-10 3.8E-15 89.0 5.9 60 10-74 346-405 (453)
32 3o7m_A Hypoxanthine phosphorib 99.1 2.6E-10 8.8E-15 77.9 7.0 43 29-74 92-134 (186)
33 3hvu_A Hypoxanthine phosphorib 99.1 2.8E-10 9.5E-15 79.0 6.9 44 29-75 114-157 (204)
34 2jbh_A Phosphoribosyltransfera 99.1 1.9E-10 6.5E-15 80.0 5.9 44 29-75 132-175 (225)
35 3ohp_A Hypoxanthine phosphorib 99.1 3.3E-10 1.1E-14 76.7 6.7 44 29-75 89-132 (177)
36 1wd5_A Hypothetical protein TT 99.0 2.8E-10 9.7E-15 77.7 5.8 43 29-74 118-160 (208)
37 1z7g_A HGPRT, HGPRTASE, hypoxa 99.0 4.5E-10 1.5E-14 77.8 6.2 44 29-75 124-167 (217)
38 1nul_A XPRT, xanthine-guanine 98.9 1.3E-09 4.3E-14 71.6 4.3 46 21-74 71-116 (152)
39 2xbu_A Hypoxanthine-guanine ph 98.8 5.3E-09 1.8E-13 72.8 5.7 44 28-74 100-160 (221)
40 3lrt_A Ribose-phosphate pyroph 98.8 2.2E-08 7.5E-13 72.6 8.9 43 29-74 201-243 (286)
41 1u9y_A RPPK;, ribose-phosphate 98.8 5.4E-09 1.8E-13 75.2 4.2 41 28-71 202-242 (284)
42 1dku_A Protein (phosphoribosyl 98.8 4.8E-09 1.7E-13 76.6 3.8 42 29-73 215-259 (317)
43 3acd_A Hypoxanthine-guanine ph 98.7 2.4E-08 8.2E-13 68.0 6.6 45 28-75 92-136 (181)
44 1i5e_A Uracil phosphoribosyltr 98.7 1.3E-08 4.4E-13 70.5 4.2 43 28-73 121-163 (209)
45 1ao0_A Glutamine phosphoribosy 98.7 1.8E-08 6.2E-13 76.0 5.2 39 29-70 336-374 (459)
46 2e55_A Uracil phosphoribosyltr 98.6 1.3E-07 4.6E-12 65.8 7.6 44 28-74 118-161 (208)
47 1ecf_A Glutamine phosphoribosy 98.6 2.3E-08 7.8E-13 76.4 3.5 40 28-70 356-395 (504)
48 2ehj_A Uracil phosphoribosyltr 98.6 1.6E-07 5.4E-12 65.4 7.1 43 29-74 121-163 (208)
49 2ji4_A Phosphoribosyl pyrophos 98.6 5.7E-08 1.9E-12 72.6 5.1 41 29-72 270-310 (379)
50 3s5j_B Ribose-phosphate pyroph 98.6 6.4E-08 2.2E-12 71.4 4.9 40 29-71 211-250 (326)
51 3dah_A Ribose-phosphate pyroph 98.5 5.7E-08 1.9E-12 71.4 4.4 41 29-72 214-254 (319)
52 1o5o_A Uracil phosphoribosyltr 98.5 1.9E-07 6.5E-12 65.7 6.6 44 28-74 133-176 (221)
53 1v9s_A Uracil phosphoribosyltr 98.5 1.1E-07 3.6E-12 66.3 3.6 43 29-74 121-163 (208)
54 1bd3_D Uprtase, uracil phospho 98.4 3.9E-07 1.3E-11 64.9 6.0 43 29-74 154-198 (243)
55 3dmp_A Uracil phosphoribosyltr 98.3 2.5E-07 8.5E-12 64.9 2.4 42 29-73 127-170 (217)
56 1dqn_A Guanine phosphoribosylt 98.3 5E-07 1.7E-11 63.6 3.9 39 29-75 116-154 (230)
57 1xtt_A Probable uracil phospho 97.7 3.4E-05 1.1E-09 53.9 4.3 41 29-72 129-171 (216)
58 3to5_A CHEY homolog; alpha(5)b 70.5 6.8 0.00023 24.3 4.2 32 28-65 9-40 (134)
59 3f6p_A Transcriptional regulat 63.7 18 0.0006 20.4 4.9 29 31-65 2-30 (120)
60 3gl9_A Response regulator; bet 61.9 20 0.00067 20.4 4.9 28 32-65 3-30 (122)
61 3eod_A Protein HNR; response r 59.2 22 0.00075 20.1 5.0 30 30-65 6-35 (130)
62 3h5i_A Response regulator/sens 57.4 24 0.00081 20.4 4.7 30 30-65 4-33 (140)
63 1r6j_A Syntenin 1; PDZ, membra 56.9 16 0.00054 21.1 3.8 36 27-65 40-75 (82)
64 3lte_A Response regulator; str 55.0 26 0.0009 19.7 4.7 30 30-65 5-34 (132)
65 3mm4_A Histidine kinase homolo 54.5 27 0.00093 22.1 5.0 26 29-57 59-84 (206)
66 3hv2_A Response regulator/HD d 53.6 30 0.001 20.2 4.8 31 29-65 12-42 (153)
67 4dad_A Putative pilus assembly 53.4 25 0.00084 20.3 4.4 32 29-66 18-50 (146)
68 3gt7_A Sensor protein; structu 50.8 36 0.0012 20.0 5.0 30 30-65 6-35 (154)
69 3t6k_A Response regulator rece 49.3 36 0.0012 19.6 5.0 29 31-65 4-32 (136)
70 2b4a_A BH3024; flavodoxin-like 48.8 36 0.0012 19.4 5.0 31 28-64 12-42 (138)
71 3m6m_D Sensory/regulatory prot 48.1 38 0.0013 19.7 4.7 30 30-65 13-42 (143)
72 3gge_A PDZ domain-containing p 47.6 28 0.00095 20.9 3.9 43 26-71 45-87 (95)
73 3hdv_A Response regulator; PSI 47.5 37 0.0013 19.2 4.6 31 30-66 6-36 (136)
74 2ayx_A Sensor kinase protein R 47.1 23 0.00077 23.4 3.8 33 28-66 8-40 (254)
75 3i42_A Response regulator rece 47.0 36 0.0012 19.0 4.3 29 31-65 3-31 (127)
76 3grc_A Sensor protein, kinase; 46.0 40 0.0014 19.2 5.1 30 30-65 5-34 (140)
77 3kto_A Response regulator rece 45.3 42 0.0014 19.2 4.7 31 30-66 5-35 (136)
78 1dcf_A ETR1 protein; beta-alph 45.2 41 0.0014 19.1 5.0 30 30-65 6-35 (136)
79 3hix_A ALR3790 protein; rhodan 43.0 30 0.001 19.9 3.5 31 28-64 49-79 (106)
80 2j48_A Two-component sensor ki 42.8 39 0.0013 18.1 4.9 29 31-65 1-29 (119)
81 1k68_A Phytochrome response re 42.4 44 0.0015 18.6 5.1 24 31-57 2-25 (140)
82 3ilm_A ALR3790 protein; rhodan 42.4 35 0.0012 20.9 3.9 31 27-63 52-82 (141)
83 3snk_A Response regulator CHEY 41.1 49 0.0017 18.8 4.3 30 30-65 13-43 (135)
84 1o63_A ATP phosphoribosyltrans 40.2 8.6 0.00029 26.7 0.8 13 37-49 146-158 (219)
85 3foj_A Uncharacterized protein 40.1 50 0.0017 18.6 5.2 30 28-63 53-82 (100)
86 3hzh_A Chemotaxis response reg 39.9 57 0.0019 19.2 4.9 28 32-65 37-64 (157)
87 1ve4_A ATP phosphoribosyltrans 39.8 8.8 0.0003 26.4 0.8 13 37-49 151-163 (206)
88 3iwh_A Rhodanese-like domain p 39.2 57 0.0019 19.0 4.5 33 27-65 52-84 (103)
89 3rqi_A Response regulator prot 38.3 67 0.0023 19.6 4.9 29 30-64 6-34 (184)
90 3e17_A Tight junction protein 38.0 38 0.0013 18.9 3.3 34 28-64 40-73 (88)
91 1i16_A Interleukin 16, LCF; cy 38.0 40 0.0014 20.3 3.6 37 27-66 75-111 (130)
92 1z7m_E ATP phosphoribosyltrans 37.7 7.9 0.00027 26.6 0.3 12 37-48 153-164 (208)
93 3lua_A Response regulator rece 37.0 58 0.002 18.5 5.0 30 30-65 3-33 (140)
94 3gk5_A Uncharacterized rhodane 36.9 61 0.0021 18.6 4.4 31 27-63 51-81 (108)
95 1wi4_A Synip, syntaxin binding 36.4 40 0.0014 19.7 3.4 30 28-57 60-89 (109)
96 2rjn_A Response regulator rece 36.3 63 0.0022 18.7 5.1 30 30-65 6-35 (154)
97 1qkk_A DCTD, C4-dicarboxylate 36.1 64 0.0022 18.7 4.7 30 30-65 2-31 (155)
98 3ilh_A Two component response 34.3 64 0.0022 18.2 4.4 25 30-57 8-32 (146)
99 3cg4_A Response regulator rece 34.3 65 0.0022 18.2 5.0 29 30-64 6-34 (142)
100 3eme_A Rhodanese-like domain p 34.2 64 0.0022 18.1 4.5 30 28-63 53-82 (103)
101 1mvo_A PHOP response regulator 33.9 64 0.0022 18.1 4.9 28 31-64 3-30 (136)
102 2pln_A HP1043, response regula 33.6 67 0.0023 18.1 4.5 32 28-65 15-46 (137)
103 1eg2_A Modification methylase 33.4 27 0.00094 24.6 2.6 20 34-53 244-263 (319)
104 3f6c_A Positive transcription 33.4 65 0.0022 18.0 4.5 27 33-65 3-29 (134)
105 3mvn_A UDP-N-acetylmuramate:L- 33.1 54 0.0019 20.5 3.8 26 32-57 35-60 (163)
106 2vd3_A ATP phosphoribosyltrans 33.0 14 0.00047 26.6 0.9 13 37-49 158-170 (289)
107 1h3d_A ATP-phosphoribosyltrans 32.3 13 0.00046 26.8 0.8 13 37-49 167-179 (299)
108 1gmx_A GLPE protein; transfera 32.2 43 0.0015 19.1 3.0 30 28-63 55-84 (108)
109 3jte_A Response regulator rece 32.0 72 0.0025 18.1 4.6 28 32-65 4-31 (143)
110 2rdm_A Response regulator rece 31.8 69 0.0024 17.8 4.0 30 30-65 4-33 (132)
111 2jtq_A Phage shock protein E; 31.5 66 0.0022 17.4 4.2 30 29-64 39-68 (85)
112 2qxy_A Response regulator; reg 31.4 74 0.0025 18.0 5.3 30 30-65 3-32 (142)
113 1boo_A Protein (N-4 cytosine-s 30.9 26 0.00088 24.6 2.1 21 33-53 253-273 (323)
114 3o46_A Maguk P55 subfamily mem 30.5 72 0.0025 17.6 3.8 30 28-57 47-76 (93)
115 1nh8_A ATP phosphoribosyltrans 30.3 15 0.00052 26.7 0.8 13 37-49 172-184 (304)
116 3r68_A Na(+)/H(+) exchange reg 30.0 73 0.0025 17.5 3.9 36 28-66 47-82 (95)
117 3two_A Mannitol dehydrogenase; 29.9 1E+02 0.0035 21.1 5.1 33 27-66 173-205 (348)
118 3cg0_A Response regulator rece 29.9 77 0.0026 17.7 5.3 31 30-66 8-38 (140)
119 3r0j_A Possible two component 29.2 1.1E+02 0.0039 19.5 4.9 30 30-65 22-51 (250)
120 3uog_A Alcohol dehydrogenase; 29.1 1.2E+02 0.0041 21.0 5.3 34 27-67 186-219 (363)
121 2lpm_A Two-component response 28.8 58 0.002 19.7 3.2 29 31-65 8-36 (123)
122 2a9o_A Response regulator; ess 28.5 76 0.0026 17.2 4.7 26 33-64 3-28 (120)
123 1srr_A SPO0F, sporulation resp 28.0 81 0.0028 17.3 5.0 27 32-64 4-30 (124)
124 1tmy_A CHEY protein, TMY; chem 27.9 79 0.0027 17.2 4.2 29 31-65 2-30 (120)
125 2qr3_A Two-component system re 27.7 85 0.0029 17.5 5.0 29 31-65 3-31 (140)
126 3b76_A E3 ubiquitin-protein li 27.7 1E+02 0.0034 18.3 4.4 34 28-64 72-105 (118)
127 1yio_A Response regulatory pro 27.3 1.1E+02 0.0038 18.7 5.2 29 31-65 4-32 (208)
128 3kht_A Response regulator; PSI 27.1 92 0.0031 17.7 4.2 25 30-57 4-28 (144)
129 1uuf_A YAHK, zinc-type alcohol 27.0 1.3E+02 0.0046 20.9 5.3 32 28-66 192-223 (369)
130 2gkg_A Response regulator homo 26.5 84 0.0029 17.0 4.7 28 32-65 6-33 (127)
131 1dbw_A Transcriptional regulat 26.5 88 0.003 17.3 5.2 18 31-48 3-20 (126)
132 3hdg_A Uncharacterized protein 26.4 92 0.0031 17.4 4.2 29 31-65 7-35 (137)
133 3egg_C Spinophilin; PP1, serin 26.3 95 0.0033 19.8 4.1 34 28-64 130-163 (170)
134 2k0z_A Uncharacterized protein 26.2 93 0.0032 17.8 3.8 31 28-64 53-83 (110)
135 2d92_A INAD-like protein; PDZ 26.1 98 0.0034 17.7 4.7 30 28-57 63-92 (108)
136 1mb3_A Cell division response 25.7 89 0.003 17.0 3.9 28 32-65 2-29 (124)
137 1zsy_A Mitochondrial 2-enoyl t 25.1 1.4E+02 0.0049 20.5 5.1 36 27-68 164-199 (357)
138 3n0r_A Response regulator; sig 25.1 1.3E+02 0.0046 20.3 4.9 30 30-65 159-188 (286)
139 3c3m_A Response regulator rece 25.0 1E+02 0.0034 17.5 4.6 28 32-65 4-31 (138)
140 3heb_A Response regulator rece 25.0 1E+02 0.0036 17.7 4.3 14 31-44 4-17 (152)
141 2iwo_A Multiple PDZ domain pro 24.8 1.1E+02 0.0039 18.0 4.3 34 27-63 71-104 (120)
142 3dzd_A Transcriptional regulat 24.7 1.2E+02 0.0041 21.5 4.7 27 32-64 1-27 (368)
143 3s2e_A Zinc-containing alcohol 24.7 1E+02 0.0035 21.0 4.3 34 27-67 163-196 (340)
144 3tum_A Shikimate dehydrogenase 24.5 1.3E+02 0.0044 20.8 4.8 31 29-66 123-153 (269)
145 1e3j_A NADP(H)-dependent ketos 24.2 1.5E+02 0.0051 20.3 5.1 32 28-66 166-197 (352)
146 1cdo_A Alcohol dehydrogenase; 24.1 1.5E+02 0.0051 20.5 5.1 33 27-66 189-222 (374)
147 2hhg_A Hypothetical protein RP 23.9 1.2E+02 0.004 17.9 4.0 30 28-63 83-112 (139)
148 1qo0_D AMIR; binding protein, 23.6 91 0.0031 19.0 3.5 32 30-67 11-42 (196)
149 2fzw_A Alcohol dehydrogenase c 23.6 1.5E+02 0.0052 20.4 5.0 33 27-66 187-220 (373)
150 3a10_A Response regulator; pho 23.5 96 0.0033 16.7 4.7 17 33-49 3-19 (116)
151 1yqd_A Sinapyl alcohol dehydro 23.5 1.7E+02 0.0059 20.3 5.3 33 28-67 184-217 (366)
152 2cf5_A Atccad5, CAD, cinnamyl 23.4 1.7E+02 0.0059 20.1 5.3 32 28-66 177-209 (357)
153 2jhf_A Alcohol dehydrogenase E 23.3 1.6E+02 0.0054 20.4 5.1 33 27-66 188-221 (374)
154 2vyc_A Biodegradative arginine 23.3 1.2E+02 0.0041 23.9 4.8 32 33-67 2-38 (755)
155 1pl8_A Human sorbitol dehydrog 23.2 1.6E+02 0.0055 20.2 5.1 33 28-67 169-202 (356)
156 3flh_A Uncharacterized protein 22.9 1.2E+02 0.0041 17.7 3.9 31 27-63 67-99 (124)
157 1g9o_A NHE-RF; PDZ domain, com 22.9 1E+02 0.0035 16.8 4.2 34 28-64 45-78 (91)
158 1e3i_A Alcohol dehydrogenase, 22.8 1.6E+02 0.0056 20.3 5.1 33 27-66 192-225 (376)
159 3eul_A Possible nitrate/nitrit 22.7 56 0.0019 18.9 2.3 26 29-57 13-38 (152)
160 2dc2_A GOPC, golgi associated 22.6 1.1E+02 0.0039 17.3 4.0 35 27-64 53-87 (103)
161 4ej6_A Putative zinc-binding d 22.6 1.6E+02 0.0056 20.4 5.1 32 28-66 180-212 (370)
162 1xhf_A DYE resistance, aerobic 22.6 1E+02 0.0036 16.8 5.2 27 32-64 4-30 (123)
163 2byg_A Channel associated prot 22.6 1.2E+02 0.0043 17.7 4.3 34 28-64 73-106 (117)
164 1p0f_A NADP-dependent alcohol 22.1 1.7E+02 0.0058 20.2 5.0 32 28-66 189-221 (373)
165 1v6b_A Harmonin isoform A1; st 22.0 74 0.0025 18.7 2.7 31 27-57 61-91 (118)
166 1f8f_A Benzyl alcohol dehydrog 22.0 1.7E+02 0.0059 20.2 5.0 33 27-66 187-220 (371)
167 2pl1_A Transcriptional regulat 21.8 1.1E+02 0.0037 16.6 4.6 15 33-47 2-16 (121)
168 4a2c_A Galactitol-1-phosphate 21.7 1.7E+02 0.0059 19.7 4.9 33 28-67 158-190 (346)
169 4e34_A Golgi-associated PDZ an 21.6 1.1E+02 0.0037 16.5 3.7 36 26-64 45-80 (87)
170 1g60_A Adenine-specific methyl 21.5 50 0.0017 22.1 2.1 19 35-53 215-233 (260)
171 2yt7_A Amyloid beta A4 precurs 21.4 1.2E+02 0.0041 17.0 3.6 30 27-56 55-84 (101)
172 2x5n_A SPRPN10, 26S proteasome 21.3 1.3E+02 0.0045 19.4 4.1 30 34-66 110-140 (192)
173 1v62_A KIAA1719 protein; struc 21.3 1.2E+02 0.0041 17.7 3.6 34 28-64 61-94 (117)
174 1qav_A Alpha-1 syntrophin (res 20.7 1E+02 0.0036 16.7 3.1 34 27-63 48-81 (90)
175 1kyq_A Met8P, siroheme biosynt 20.6 2E+02 0.007 19.9 5.2 33 29-68 11-43 (274)
176 3kcn_A Adenylate cyclase homol 20.4 49 0.0017 19.2 1.7 14 30-43 3-16 (151)
177 3l4f_D SH3 and multiple ankyri 20.4 1.5E+02 0.0052 17.8 4.6 35 28-65 83-117 (132)
No 1
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=99.64 E-value=9.9e-16 Score=103.75 Aligned_cols=71 Identities=41% Similarity=0.700 Sum_probs=63.0
Q ss_pred CCceeeeeeeeccccceeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCCC
Q 034952 3 PLGEIISEEYSLEYGKDVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLEF 76 (78)
Q Consensus 3 ~pg~~i~~~y~~~~g~~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~~ 76 (78)
+|+..++..|..+|+.+.++++.....+|++||||||++|||+|+.+++++|+++ |++.+.+++++++.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~---Ga~~V~~~~l~~~~~~ 168 (190)
T 2dy0_A 98 LPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRL---GGEVADAAFIINLFDL 168 (190)
T ss_dssp CCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHT---TCEEEEEEEEEEEGGG
T ss_pred CCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHc---CCEEEEEEEEEEccCc
Confidence 3667788888888988888887556678999999999999999999999999999 9999999999998754
No 2
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=99.63 E-value=2.4e-15 Score=101.66 Aligned_cols=70 Identities=34% Similarity=0.507 Sum_probs=63.2
Q ss_pred CceeeeeeeeccccceeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCCC
Q 034952 4 LGEIISEEYSLEYGKDVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLEF 76 (78)
Q Consensus 4 pg~~i~~~y~~~~g~~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~~ 76 (78)
|+...+.+|..+|+.+.+++......+|++||||||++|||+|+.++++.|+++ |++.+.+++++++.++
T Consensus 95 ~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~---Ga~~v~~~~l~~~~~~ 164 (187)
T 1g2q_A 95 PGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQL---EANLLEYNFVMELDFL 164 (187)
T ss_dssp CSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHT---TCEEEEEEEEEECCCS
T ss_pred CcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHc---CCeEEEEEEEEEccCc
Confidence 667788888888988888887666678999999999999999999999999999 9999999999999875
No 3
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=99.57 E-value=4.3e-15 Score=104.43 Aligned_cols=70 Identities=27% Similarity=0.491 Sum_probs=61.1
Q ss_pred Cceee-eeeeeccc---cceeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCCC
Q 034952 4 LGEII-SEEYSLEY---GKDVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLEF 76 (78)
Q Consensus 4 pg~~i-~~~y~~~~---g~~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~~ 76 (78)
||+.. +.+|..+| +.+.++++.+.+.+|++||||||++|||+|+.+++++|+++ |++++++++++++.++
T Consensus 107 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~---Ga~~v~v~~l~~~~~~ 180 (236)
T 1qb7_A 107 AGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEAS---DAVVVEMVSILSIPFL 180 (236)
T ss_dssp CSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHT---TCEEEEEEEEEECGGG
T ss_pred CCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHc---CCeEEEEEEEEEcccc
Confidence 55555 66788888 67778887666679999999999999999999999999999 9999999999999764
No 4
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=99.56 E-value=2.1e-14 Score=96.03 Aligned_cols=70 Identities=43% Similarity=0.696 Sum_probs=60.8
Q ss_pred CceeeeeeeeccccceeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCCC
Q 034952 4 LGEIISEEYSLEYGKDVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLEF 76 (78)
Q Consensus 4 pg~~i~~~y~~~~g~~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~~ 76 (78)
|+..++.+|..+++.+.+++......+|++||||||++|||+|+.++++.|+++ |++.+.+++++++.+.
T Consensus 93 ~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~---Ga~~v~~~~l~~~~~~ 162 (180)
T 1zn8_A 93 PGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRL---QAEVLECVSLVELTSL 162 (180)
T ss_dssp CSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHT---TCEEEEEEEEEEEGGG
T ss_pred CcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHc---CCEEEEEEEEEEccCc
Confidence 556677777778888888887655578999999999999999999999999999 9999999999988653
No 5
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.56 E-value=1.2e-14 Score=98.26 Aligned_cols=70 Identities=26% Similarity=0.376 Sum_probs=59.3
Q ss_pred Cceeeeeeeeccccce-eEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCe--EEEEEEEEecCCC
Q 034952 4 LGEIISEEYSLEYGKD-VMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFH--LERCQKMVLLLEF 76 (78)
Q Consensus 4 pg~~i~~~y~~~~g~~-~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~--~~~~~~~v~~~~~ 76 (78)
|++..+..|...++.. .+++....+.+|++||||||++|||+|+.++++.|+++ |++ .+.+++++++.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~---Ga~~~~V~~~~l~~k~~~ 161 (186)
T 1l1q_A 89 PGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETA---GVKPENIYINVLYEIEAL 161 (186)
T ss_dssp CSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHT---TCCGGGEEEEEEEECGGG
T ss_pred CCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHc---CCCcceEEEEEEEEccCc
Confidence 4566666777767655 67777555568999999999999999999999999999 999 9999999999764
No 6
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.43 E-value=1.1e-12 Score=88.65 Aligned_cols=55 Identities=11% Similarity=0.160 Sum_probs=48.3
Q ss_pred eeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCCC
Q 034952 19 DVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLEF 76 (78)
Q Consensus 19 ~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~~ 76 (78)
..+++..+...+|++||||||++|||+|+.+++++|+++ |++.+.+++++++.+.
T Consensus 108 ~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~---Ga~~V~~~~l~~~~~~ 162 (197)
T 1y0b_A 108 SQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQA---GASIAGIGIVIEKSFQ 162 (197)
T ss_dssp EEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHT---TCEEEEEEEEEEETTS
T ss_pred EEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHC---CCEEEEEEEEEEeccc
Confidence 346666445568999999999999999999999999999 9999999999998754
No 7
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.42 E-value=9.5e-13 Score=95.36 Aligned_cols=70 Identities=26% Similarity=0.398 Sum_probs=55.7
Q ss_pred Cceeeeeeeeccccc--eeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCCC
Q 034952 4 LGEIISEEYSLEYGK--DVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLEF 76 (78)
Q Consensus 4 pg~~i~~~y~~~~g~--~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~~ 76 (78)
|+..++.+|...... ..++++...+.+|++||||||++|||+|+.+++++|+++ |++++++++++++.+-
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~a---GA~vV~v~vlvdr~~~ 238 (291)
T 1o57_A 167 EGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEF---NANVAGIGVLVEAEGV 238 (291)
T ss_dssp -CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGG---TCEEEEEEEEEEESSC
T ss_pred CCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHC---CCEEEEEEEEEEcCcc
Confidence 455566666443211 356776656679999999999999999999999999999 9999999999998763
No 8
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.36 E-value=3.7e-12 Score=88.57 Aligned_cols=61 Identities=15% Similarity=0.194 Sum_probs=51.5
Q ss_pred eeeccccceeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCCC
Q 034952 11 EYSLEYGKDVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLEF 76 (78)
Q Consensus 11 ~y~~~~g~~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~~ 76 (78)
+-.+.||.+.+... ...+|++||||||++|||+|+.+++++|+++ |++++++++++|+.+.
T Consensus 107 k~~k~~g~~~~~~~--~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~---Ga~~v~v~~l~dr~~~ 167 (226)
T 2ps1_A 107 KEAKDHGEGGIIVG--SALENKRILIIDDVMTAGTAINEAFEIISNA---KGQVVGSIIALDRQEV 167 (226)
T ss_dssp EEEESSTTCEEEEE--SCCTTCEEEEEEEEESSSHHHHHHHHHHHHT---TCEEEEEEEEEECCBB
T ss_pred chhhhcCCCceEec--CCCCcCEEEEEEecccChHHHHHHHHHHHHc---CCeEEEEEEEEEccCc
Confidence 34456777766543 3348999999999999999999999999999 9999999999999853
No 9
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.34 E-value=2.3e-12 Score=85.41 Aligned_cols=53 Identities=21% Similarity=0.172 Sum_probs=45.3
Q ss_pred eEEEEcccc--CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 20 VMEMHVCAV--QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 20 ~~~~~~~~~--~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
.+++..... .+|++||||||++|||+|+.++++.|+++ |++.+.+++++++..
T Consensus 107 ~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~---Ga~~V~~~~l~~~~~ 161 (175)
T 1vch_A 107 VLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRA---GGHVVARLAVFRQGT 161 (175)
T ss_dssp EEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHT---TCEEEEEEEEEECSC
T ss_pred EEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHc---CCeEEEEEEEEecCC
Confidence 455543323 38999999999999999999999999999 999999999998764
No 10
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.32 E-value=5.4e-12 Score=85.04 Aligned_cols=59 Identities=19% Similarity=0.243 Sum_probs=46.8
Q ss_pred eeecccccee-EEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 11 EYSLEYGKDV-MEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 11 ~y~~~~g~~~-~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
+..++||... ++ +.+.+|++|+||||++|||+|+.++++.|+++ |++.+.+++++++.+
T Consensus 96 k~~~~~g~~~~~~---g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~---Ga~~v~~~~l~~~~~ 155 (180)
T 2p1z_A 96 KEAKKHGMQRRIE---GPDVVGKKVLVVEDTTTTGNSPLTAVKALREA---GAEVVGVATVVDRAT 155 (180)
T ss_dssp SCCC-CC-CCSEE---SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHH---TCEEEEEEEEEC-CC
T ss_pred eccccccchhhcc---CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHc---CCeEEEEEEEEEcCc
Confidence 3334465543 22 45578999999999999999999999999999 999999999999864
No 11
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.30 E-value=1.1e-11 Score=80.38 Aligned_cols=52 Identities=19% Similarity=0.213 Sum_probs=44.8
Q ss_pred EEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 21 MEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 21 ~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
+........+|++||||||++|||+|+.++++.|+++ |++.+.++++.+++.
T Consensus 73 ~~~~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~---ga~~v~~~~l~~~~~ 124 (153)
T 1vdm_A 73 ITIPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKL---GAKEIKIACLAMKPW 124 (153)
T ss_dssp EEECCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTT---TBSEEEEEEEEECTT
T ss_pred EeccCCcCCCCCEEEEEecccCChHHHHHHHHHHHHc---CCCEEEEEEEEeCCC
Confidence 4443334568999999999999999999999999999 999999999998753
No 12
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.30 E-value=6.9e-12 Score=88.76 Aligned_cols=60 Identities=15% Similarity=0.220 Sum_probs=45.4
Q ss_pred eeeecccccee-EEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 10 EEYSLEYGKDV-MEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 10 ~~y~~~~g~~~-~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
++..+.||... ++ +...+|++||||||++|||+|+.+++++|+++ |++++++++++|+.+
T Consensus 117 RK~~k~~g~~~~i~---g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~---Ga~vv~v~vlvdr~e 177 (232)
T 3mjd_A 117 RKEAKDHGEGGVFV---GADMTNKKVLLIDDVMTAGTAFYESYNKLKII---NAKIAGVVLSIDRQE 177 (232)
T ss_dssp CCC-------CCEE---ESCCTTCEEEEECSCCSSSHHHHHHHHHHHTT---TCEEEEEEEEEECCB
T ss_pred EeecccCCCCceEe---ccCCCCCEEEEEEeeccccHHHHHHHHHHHHC---CCEEEEEEEEEECCc
Confidence 33345566643 33 33458999999999999999999999999999 999999999999863
No 13
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.25 E-value=1.2e-11 Score=83.06 Aligned_cols=43 Identities=23% Similarity=0.330 Sum_probs=41.2
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
+|++|+||||++|||+|+.++++.|+++ |++++.+++++++.+
T Consensus 105 ~gk~VllVDDvitTG~Tl~~~~~~L~~~---Ga~~v~~~~l~~r~~ 147 (178)
T 2yzk_A 105 PKGRVVVVDDVATTGTSIAKSIEVLRSN---GYTVGTALVLVDRGE 147 (178)
T ss_dssp CSSEEEEEEEEESSSHHHHHHHHHHHHT---TCEEEEEEEEEECCS
T ss_pred CCCEEEEEEeccCCcHHHHHHHHHHHHc---CCeEEEEEEEEEcCc
Confidence 8999999999999999999999999999 999999999999764
No 14
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.24 E-value=4.5e-11 Score=85.61 Aligned_cols=63 Identities=21% Similarity=0.334 Sum_probs=53.5
Q ss_pred eeeeccccceeEEEEcccc--CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 10 EEYSLEYGKDVMEMHVCAV--QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 10 ~~y~~~~g~~~~~~~~~~~--~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
..|..+++.+.+++..... .+|++||||||+++||+|+.+++++|+++ |++.+.++++++++.
T Consensus 133 ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~---g~~~v~va~l~~k~~ 197 (250)
T 3ozf_A 133 KSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKF---EIKTVAIACLFIKRT 197 (250)
T ss_dssp EEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGG---CCSEEEEEEEEEECC
T ss_pred EEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhc---CCCEEEEEEEEECCc
Confidence 4677777777777653322 38999999999999999999999999999 999999999999875
No 15
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.23 E-value=8.3e-12 Score=85.70 Aligned_cols=56 Identities=18% Similarity=0.409 Sum_probs=47.9
Q ss_pred ccccceeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 14 LEYGKDVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 14 ~~~g~~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
++||..... .+.+.+|++||||||++|||+|+.++++.|+++ |++++++++++++.
T Consensus 96 k~~g~~~~~--~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~---Ga~~v~~~~l~~~~ 151 (205)
T 2wns_A 96 KDYGTKRLV--EGTINPGETCLIIEDVVTSGSSVLETVEVLQKE---GLKVTDAIVLLDRE 151 (205)
T ss_dssp TTSSSCCSE--ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHT---TCBCCEEEEEEECC
T ss_pred CccCccccc--cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHC---CCEEEEEEEEEEcC
Confidence 456655421 256678999999999999999999999999999 99999999999984
No 16
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.23 E-value=3.2e-11 Score=85.32 Aligned_cols=57 Identities=18% Similarity=0.310 Sum_probs=44.4
Q ss_pred eccccceeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 13 SLEYGKDVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
.+.||+... + .+.+.+|++||||||++|||+|+.+++++|+++ |++++++++++++.
T Consensus 121 ~k~~G~~~~-i-~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~---Ga~vv~v~~l~~~~ 177 (234)
T 3m3h_A 121 AKGHGKGNQ-I-EGKAEKGQKVVVVEDLISTGGSAITCVEALREA---GCEVLGIVSIFTYE 177 (234)
T ss_dssp -------CC-E-ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHT---TCEEEEEEEEEECC
T ss_pred eccCCcceE-E-ecccCCCCEEEEEecccchhHHHHHHHHHHHHC---CCEEEEEEEEEECc
Confidence 345665431 1 246679999999999999999999999999999 99999999999975
No 17
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.21 E-value=3.7e-11 Score=85.49 Aligned_cols=59 Identities=17% Similarity=0.241 Sum_probs=44.1
Q ss_pred eeeecccccee-EEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 10 EEYSLEYGKDV-MEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 10 ~~y~~~~g~~~-~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
++..+.||... ++ +...+| +||||||++|||+|+.+++++|+++ |++++++++++|+.+
T Consensus 124 RK~~k~~g~~~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~---Ga~vv~v~vlvdr~e 183 (238)
T 3n2l_A 124 RKEAKNHGEGGNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQAN---KADLAGVLVAIDRQE 183 (238)
T ss_dssp CCC--------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHT---TCEEEEEEEEEECCC
T ss_pred eeccCCCCCCceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHc---CCEEEEEEEEEEccc
Confidence 33445566543 33 344589 9999999999999999999999999 999999999999863
No 18
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.20 E-value=4.9e-11 Score=84.88 Aligned_cols=57 Identities=19% Similarity=0.316 Sum_probs=45.0
Q ss_pred eccccceeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 13 SLEYGKDVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
.+.||+... + .+.+.+|++||||||++|||+|+.+++++|+++ |++++++++++++.
T Consensus 133 ~k~~G~~~~-i-eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~---Ga~vv~v~~l~d~~ 189 (243)
T 3dez_A 133 PKDHGAGNQ-I-EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQRE---GADVLGVVAIFTYE 189 (243)
T ss_dssp CC-----CC-E-ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHT---TCEEEEEEEEEECC
T ss_pred eccCCceeE-E-EeccCCCCEEEEEEeeccccHHHHHHHHHHHHC---CCEEEEEEEEEECC
Confidence 345555431 1 245678999999999999999999999999999 99999999999975
No 19
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.19 E-value=2.6e-11 Score=80.85 Aligned_cols=43 Identities=21% Similarity=0.172 Sum_probs=41.0
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCC-CeEEEEEEEEecC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFN-FHLERCQKMVLLL 74 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g-~~~~~~~~~v~~~ 74 (78)
.+|++||||||++|||+|+.++++.|+++ | ++.+.+++++++.
T Consensus 96 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~---G~a~~V~~~~l~~k~ 139 (181)
T 1a3c_A 96 ITDQKVILVDDVLYTGRTVRAGMDALVDV---GRPSSIQLAVLVDRG 139 (181)
T ss_dssp CTTSEEEEEEEEESSSHHHHHHHHHHHHH---CCCSEEEEEEEEECC
T ss_pred CCCCEEEEEeCccCcHHHHHHHHHHHHhc---CCCcEEEEEEEEccC
Confidence 58999999999999999999999999999 9 9999999999876
No 20
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.19 E-value=4.8e-11 Score=80.04 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=42.1
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
..+|++||||||+++||+|+.++++.|+++ |++.+.++++++++.
T Consensus 92 ~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~---ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 92 NIEGRHVLVVEDIIDTGLTMYQLLNNLQMR---KPASLKVCTLCDKDI 136 (183)
T ss_dssp CCTTSEEEEEEEEESSSHHHHHHHHHHHTT---CCSEEEEEEEEEECC
T ss_pred CCCCCEEEEECCccCCHHHHHHHHHHHHhc---CCCEEEEEEEEecCc
Confidence 358999999999999999999999999999 999999999998865
No 21
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.18 E-value=1.2e-10 Score=81.60 Aligned_cols=62 Identities=21% Similarity=0.158 Sum_probs=49.3
Q ss_pred eeeccccceeEEEEcc--ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 11 EYSLEYGKDVMEMHVC--AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 11 ~y~~~~g~~~~~~~~~--~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
.|..++....+++... ...+|++||||||+++||+|+.+++++|+++ |++.+.+++++++++
T Consensus 120 ~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~---ga~~V~vavl~~k~~ 183 (233)
T 1fsg_A 120 SYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAV---GPKSMRIATLVEKRT 183 (233)
T ss_dssp EEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTT---CCSEEEEEEEEEECC
T ss_pred eccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhc---CCCEEEEEEEEECCc
Confidence 4654444444544322 2357999999999999999999999999999 999999999999764
No 22
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.18 E-value=5.6e-11 Score=80.10 Aligned_cols=44 Identities=20% Similarity=0.091 Sum_probs=41.6
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
..+|++||||||+++||+|+.++++.|+++ |++.+.++++++++
T Consensus 95 ~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~---Ga~~V~~~~l~~~~ 138 (185)
T 2geb_A 95 DIEGKDVLIVEDIIDSGLTLAYLRETLLGR---KPRSLKICTILDKP 138 (185)
T ss_dssp CCTTSEEEEEEEEESSCHHHHHHHHHHHTT---CCSEEEEEEEEECG
T ss_pred CCCCCEEEEECCccCCHHHHHHHHHHHHhc---CCCEEEEEEEEECC
Confidence 357999999999999999999999999999 99999999999876
No 23
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.18 E-value=2.7e-11 Score=83.69 Aligned_cols=45 Identities=18% Similarity=0.314 Sum_probs=42.1
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
...+| +||||||++|||+|+.+++++|+++ |++++++++++|+.+
T Consensus 114 ~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~---Ga~~v~v~~l~dr~~ 158 (213)
T 1lh0_A 114 SALQG-RVMLVDDVITAGTAIRESMEIIQAH---GATLAGVLISLDRQE 158 (213)
T ss_dssp SCCCS-EEEEECSCCSSSCHHHHHHHHHHHT---TCEEEEEEEEEECCB
T ss_pred CCCCC-CEEEEEecccchHHHHHHHHHHHHC---CCeEEEEEEEEEccc
Confidence 34589 9999999999999999999999999 999999999999974
No 24
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.17 E-value=3.7e-11 Score=80.32 Aligned_cols=43 Identities=26% Similarity=0.160 Sum_probs=40.8
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCC-CeEEEEEEEEecC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFN-FHLERCQKMVLLL 74 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g-~~~~~~~~~v~~~ 74 (78)
.+|++||||||++|||+|+.++++.|+++ | ++.+.++++++++
T Consensus 94 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~---G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 94 LTGKAIVLVDDVLYTGRTARAALDALIDL---GRPRRIYLAVLVDRG 137 (181)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHH---CCCSEEEEEEEEECC
T ss_pred CCCCEEEEEecCCCcHHHHHHHHHHHHhc---CCCcEEEEEEEEcCC
Confidence 48999999999999999999999999999 9 8999999999876
No 25
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.16 E-value=8.1e-11 Score=80.41 Aligned_cols=44 Identities=20% Similarity=0.091 Sum_probs=41.6
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
..+|++||||||++|||+|+.++++.|++. |++.+.++++++++
T Consensus 115 ~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~---Ga~~V~~~~l~~~~ 158 (205)
T 1yfz_A 115 DIEGKDVLIVEDIIDSGLTLAYLRETLLGR---KPRSLKICTILDKP 158 (205)
T ss_dssp CCTTSEEEEEEEEESSCHHHHHHHHHHHTT---CCSEEEEEEEEECG
T ss_pred CCCcCEEEEECCccCcHHHHHHHHHHHHhc---CCCEEEEEEEEecC
Confidence 358999999999999999999999999999 99999999999876
No 26
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.14 E-value=8.8e-11 Score=80.54 Aligned_cols=46 Identities=22% Similarity=0.343 Sum_probs=42.8
Q ss_pred cccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 26 CAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 26 ~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
+...+|++||||||++|||+|+.++++.|+++ |++.+++++++++.
T Consensus 112 g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~---Ga~~v~v~~l~~~~ 157 (211)
T 2aee_A 112 GRVLKGQKMVIIEDLISTGGSVLDAAAAASRE---GADVLGVVAIFTYE 157 (211)
T ss_dssp SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHT---TCEEEEEEEEEECC
T ss_pred CCCCCcCEEEEEeecccchHHHHHHHHHHHHC---CCcEEEEEEEEecc
Confidence 34568999999999999999999999999999 99999999999975
No 27
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.13 E-value=6.5e-11 Score=81.76 Aligned_cols=44 Identities=14% Similarity=0.077 Sum_probs=41.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
.+|++||||||+++||+|+.++++.|+++ |++.+.+++++++++
T Consensus 116 v~gk~VllVDDvi~TG~Tl~aa~~~L~~~---Ga~~V~v~~l~~k~~ 159 (211)
T 1pzm_A 116 VENRHIMLVEDIVDSAITLQYLMRFMLAK---KPASLKTVVLLDKPS 159 (211)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHTT---CCSEEEEEEEEECGG
T ss_pred CCCCEEEEECCccccHHHHHHHHHHHHhc---CCCEEEEEEEEecCc
Confidence 47999999999999999999999999999 999999999998863
No 28
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.12 E-value=7.9e-11 Score=80.81 Aligned_cols=43 Identities=16% Similarity=0.143 Sum_probs=40.9
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCC-CeEEEEEEEEecC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFN-FHLERCQKMVLLL 74 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g-~~~~~~~~~v~~~ 74 (78)
.+|++||||||++|||+|+.++++.|+++ | ++.+.+++++++.
T Consensus 110 ~~gk~VlLVDDVitTG~Tl~aa~~~L~~~---G~a~~V~vavlv~k~ 153 (201)
T 1w30_A 110 IDDALVILVDDVLYSGRSVRSALDALRDV---GRPRAVQLAVLVDRG 153 (201)
T ss_dssp STTCEEEEEEEEESSSHHHHHHHHHHHHH---CCCSEEEEEEEEECC
T ss_pred CCCCEEEEECCccchHHHHHHHHHHHHhC---CCCcEEEEEEEEecC
Confidence 57999999999999999999999999999 9 9999999999884
No 29
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.10 E-value=1.7e-10 Score=78.39 Aligned_cols=44 Identities=23% Similarity=0.215 Sum_probs=41.8
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
.+|++||||||+++||+|+.++++.|+++ |++.+.++++++++.
T Consensus 93 ~~gk~vliVDDii~TG~Tl~~~~~~l~~~---g~~~v~~~~l~~k~~ 136 (181)
T 2ywu_A 93 IHGRDVIVVEDIVDTGLTLSYLLDYLEAR---KPASVRVAALLSKPS 136 (181)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHTT---CCSEEEEEEEEECGG
T ss_pred CCCCEEEEECCeeCChHHHHHHHHHHHhc---CCcEEEEEEEEECCC
Confidence 58999999999999999999999999999 999999999999864
No 30
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.10 E-value=1.4e-10 Score=80.96 Aligned_cols=44 Identities=23% Similarity=0.100 Sum_probs=41.7
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
.+|++||||||+++||+|+.++++.|+++ |++.+.++++++++.
T Consensus 101 v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~---Ga~~V~v~~l~~k~~ 144 (220)
T 1tc1_A 101 IEGHHVLIVEDIVDTALTLNYLYHMYFTR---RPASLKTVVLLDKRE 144 (220)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHTT---CCSEEEEEEEEECTT
T ss_pred CCCCEEEEEeCccCcHHHHHHHHHHHHhc---CCCEEEEEEEEECCc
Confidence 47999999999999999999999999999 999999999998874
No 31
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.09 E-value=1.1e-10 Score=88.98 Aligned_cols=60 Identities=27% Similarity=0.315 Sum_probs=45.0
Q ss_pred eeeeccccceeEEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 10 EEYSLEYGKDVMEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 10 ~~y~~~~g~~~~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
++..++||.... + .+.+.+|++||||||++|||+|+.+++++|+++ |++++++++++|+.
T Consensus 346 rk~~k~~g~~~~-i-~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~---g~~vv~v~~lvdr~ 405 (453)
T 3qw4_B 346 RREAKIYGTKAA-I-EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSA---GLEVVSIVVLVDRD 405 (453)
T ss_dssp SSCC-------C-E-ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTT---TCEEEEEEEEEECS
T ss_pred EeeccccCcCce-E-ecccCCCCEEEEEeeeechhHHHHHHHHHHHHc---CCEEEEEEEEEECC
Confidence 333456776542 1 245679999999999999999999999999999 99999999999986
No 32
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.09 E-value=2.6e-10 Score=77.92 Aligned_cols=43 Identities=14% Similarity=0.125 Sum_probs=41.5
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
.+|++||||||+++||+|+.++++.|+++ |++.+.++++++++
T Consensus 92 ~~gk~VliVDDii~TG~Tl~~~~~~l~~~---g~~~v~~~~l~~k~ 134 (186)
T 3o7m_A 92 ITGKNVIVVEDIIDSGLTLHFLKDHFFMH---KPKALKFCTLLDKP 134 (186)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHTT---CCSEEEEEEEEECG
T ss_pred CCcCEEEEEcCeeCCcHHHHHHHHHHHhc---CCcEEEEEEEEECC
Confidence 58999999999999999999999999999 99999999999987
No 33
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.08 E-value=2.8e-10 Score=79.04 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=41.8
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
.+|++||||||+++||+|+.++++.|+++ |++.+.+++++++++
T Consensus 114 ~~gk~VliVDDii~TG~Tl~~~~~~l~~~---g~~~v~~~~l~~k~~ 157 (204)
T 3hvu_A 114 VEGRDILIVEDIIDSGLTLSYLVDLFKYR---KAKSVKIVTLLDKPT 157 (204)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHT---TCSEEEEEEEEECGG
T ss_pred CCCCEEEEEeceeCchHHHHHHHHHHHHc---CCCEEEEEEEEECCC
Confidence 58999999999999999999999999999 999999999999863
No 34
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.07 E-value=1.9e-10 Score=79.95 Aligned_cols=44 Identities=25% Similarity=0.434 Sum_probs=41.5
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
.+|++||||||+++||+|+.++++.|+++ |++.+.++++++++.
T Consensus 132 v~Gk~VllVDDii~TG~Tl~~a~~~L~~~---ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 132 LAGKNVLIVEDVVGTGRTMKALLSNIEKY---KPNMIKVASLLVKRT 175 (225)
T ss_dssp GTTSEEEEEEEEESSSHHHHHHHHHHHTT---CCSEEEEEEEEEECC
T ss_pred cCCCEEEEEccccCcHHHHHHHHHHHHhc---CCCEEEEEEEEECCc
Confidence 58999999999999999999999999999 999999999998764
No 35
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.06 E-value=3.3e-10 Score=76.69 Aligned_cols=44 Identities=23% Similarity=0.241 Sum_probs=41.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
.+|++||||||+++||+|+.++++.|+++ |++.+.++++++++.
T Consensus 89 ~~gk~vliVDDii~TG~Tl~~~~~~l~~~---g~~~v~~~~l~~~~~ 132 (177)
T 3ohp_A 89 IKGKDVLLVEDIIDTGNTLNKVKEILALR---EPKSIRICTLLDKPT 132 (177)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHTT---CCSEEEEEEEEECGG
T ss_pred cCCCEEEEEeeEeCcHHHHHHHHHHHHhc---CCcEEEEEEEEECCc
Confidence 58999999999999999999999999999 999999999999863
No 36
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.05 E-value=2.8e-10 Score=77.72 Aligned_cols=43 Identities=26% Similarity=0.193 Sum_probs=39.9
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
.+|++|+||||++|||+|+.++++.|+++ |++.+.+++.++..
T Consensus 118 ~~gk~VllVDDvi~TG~Tl~~a~~~L~~~---ga~~V~v~~~v~~~ 160 (208)
T 1wd5_A 118 RKGRDVVLVDDGVATGASMEAALSVVFQE---GPRRVVVAVPVASP 160 (208)
T ss_dssp CTTSEEEEECSCBSSCHHHHHHHHHHHTT---CCSEEEEEEEEBCH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHHHHc---CCCEEEEEEEEcCH
Confidence 47999999999999999999999999999 99999999888764
No 37
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.02 E-value=4.5e-10 Score=77.82 Aligned_cols=44 Identities=23% Similarity=0.469 Sum_probs=41.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
.+|++||||||+++||+|+.++++.|+++ |++.+.+++++++++
T Consensus 124 ~~gk~VliVDDii~TG~Tl~~~~~~L~~~---g~~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 124 LTGKNVLIVEDIIDTGKTMQTLLSLVRQY---NPKMVKVASLLVKRT 167 (217)
T ss_dssp GTTSEEEEEEEECCCHHHHHHHHHHHHTT---CCSEEEEEEEEEECC
T ss_pred cCCCEEEEEeceeCcHHHHHHHHHHHHhc---CCCEEEEEEEEECcc
Confidence 57999999999999999999999999999 999999999999764
No 38
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=98.89 E-value=1.3e-09 Score=71.64 Aligned_cols=46 Identities=26% Similarity=0.345 Sum_probs=36.5
Q ss_pred EEEEccccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 21 MEMHVCAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 21 ~~~~~~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
+++......+|++||||||+++||+|+.++++.|++ +.++++++++
T Consensus 71 ~~~~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~--------v~~a~L~~k~ 116 (152)
T 1nul_A 71 LKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK--------AHFVTIFAKP 116 (152)
T ss_dssp CEEEECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT--------SEEEEEEECG
T ss_pred EEEecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh--------CCEEEEEECC
Confidence 333333335899999999999999999999998875 4578888875
No 39
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=98.82 E-value=5.3e-09 Score=72.84 Aligned_cols=44 Identities=23% Similarity=0.089 Sum_probs=39.4
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhc--------hhcCCC---------eEEEEEEEEecC
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGR--------FVSFNF---------HLERCQKMVLLL 74 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~--------~~~~g~---------~~~~~~~~v~~~ 74 (78)
..+|++||||||+++||+|+.++++.|++ + |+ +.+.+++++++.
T Consensus 100 ~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~---g~~~~~~~~~~~~v~iavL~~K~ 160 (221)
T 2xbu_A 100 DLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAK---GIDTEKSPEMKTNFGIFVLHDKQ 160 (221)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHT---TCCTTTCGGGSCEEEEEEEEEEC
T ss_pred cCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhc---CccccccccCcceEEEEEEEecc
Confidence 36899999999999999999999999997 6 76 578899999976
No 40
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=98.81 E-value=2.2e-08 Score=72.58 Aligned_cols=43 Identities=30% Similarity=0.376 Sum_probs=40.1
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
.+|++++||||+++||+|+.+++++|++. |++.+.+++.....
T Consensus 201 v~gk~vliVDDii~TG~Tl~~a~~~L~~~---Ga~~v~~~~th~v~ 243 (286)
T 3lrt_A 201 VNGKKLLIVDDIISTGGTIAKSSGLLREK---GASKIYVSAVHGLF 243 (286)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHT---TCSEEEEEEEEECC
T ss_pred CCcCEEEEEeccccccHHHHHHHHHHHhC---CCCEEEEEEEEeec
Confidence 58999999999999999999999999999 99999999987654
No 41
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=98.76 E-value=5.4e-09 Score=75.21 Aligned_cols=41 Identities=27% Similarity=0.354 Sum_probs=37.8
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMV 71 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v 71 (78)
..+|++|+||||+++||+|+.++++.|+++ |++.+.+++..
T Consensus 202 ~v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~---Ga~~V~~~~~h 242 (284)
T 1u9y_A 202 DAKDRDVFIVDDIISTGGTMATAVKLLKEQ---GAKKIIAACVH 242 (284)
T ss_dssp CCTTCCEEEEEEECSSSHHHHHHHHHHHHT---TCCSEEEEEEE
T ss_pred cCCCCEEEEEecccCchHHHHHHHHHHHHC---CCcEEEEEEEe
Confidence 357999999999999999999999999999 99999888864
No 42
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=98.75 E-value=4.8e-09 Score=76.62 Aligned_cols=42 Identities=21% Similarity=0.211 Sum_probs=38.2
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEE---EEec
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQK---MVLL 73 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~---~v~~ 73 (78)
.+|++|+||||++|||+|+.++++.|+++ |++.+.+++ ++..
T Consensus 215 v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~---Ga~~V~~~~tH~v~~~ 259 (317)
T 1dku_A 215 IEGKTAILIDDIIDTAGTITLAANALVEN---GAKEVYACCTHPVLSG 259 (317)
T ss_dssp CTTCEEEEECSEESSCHHHHHHHHHHHHT---TCSEEEEECSEECCCT
T ss_pred CCCCEEEEEecccCCCHHHHHHHHHHHHc---CCcEEEEEEECcccCh
Confidence 47999999999999999999999999999 999998887 5543
No 43
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=98.74 E-value=2.4e-08 Score=67.99 Aligned_cols=45 Identities=22% Similarity=0.197 Sum_probs=41.7
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
-.+|++||||||++.||.|+.++.+.|.+. |++.+..+++++++.
T Consensus 92 ~i~gk~VllVDDIldTG~Tl~~~~~~l~~~---~p~sv~~avLl~K~~ 136 (181)
T 3acd_A 92 PIHGRDVIVVEDIVDTGLTLSYLLDYLEAR---KPASVRVAALLSKPS 136 (181)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHTT---CCSEEEEEEEEECGG
T ss_pred ccCCCeeEEEEEEEcCchhHHHHHHHHhcC---CCCEEEEEEEEEcCc
Confidence 357999999999999999999999999999 999999999999753
No 44
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=98.69 E-value=1.3e-08 Score=70.45 Aligned_cols=43 Identities=26% Similarity=0.274 Sum_probs=38.8
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEec
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLL 73 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~ 73 (78)
-.+|++|+||||+++||+|+.++++.|+++ |++.+.+++++..
T Consensus 121 ~i~~~~VllvDd~l~TG~T~~~a~~~L~~~---G~~~I~~~~lv~~ 163 (209)
T 1i5e_A 121 DVEERDFIIVDPMLATGGSAVAAIDALKKR---GAKSIKFMCLIAA 163 (209)
T ss_dssp TTTTSEEEEECSEESSSHHHHHHHHHHHHT---TCCCEEEECSEEC
T ss_pred ccCCCEEEEEcCCCcCHHHHHHHHHHHHHc---CCCEEEEEEEEEC
Confidence 357899999999999999999999999999 9998888887654
No 45
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=98.68 E-value=1.8e-08 Score=76.05 Aligned_cols=39 Identities=21% Similarity=0.249 Sum_probs=36.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEE
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKM 70 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~ 70 (78)
.+|++|+||||++|||+|+.++++.|+++ |++.+.++++
T Consensus 336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~---Ga~~V~~~~l 374 (459)
T 1ao0_A 336 VEGKRVVMVDDSIVRGTTSRRIVTMLREA---GATEVHVKIS 374 (459)
T ss_dssp HTTCEEEEEESCCSSSHHHHHHHHHHHHT---TCSEEEEEES
T ss_pred CCCCeEEEEeeeecCHHHHHHHHHHHHHc---CCCEEEEEEe
Confidence 47999999999999999999999999999 9999988775
No 46
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=98.61 E-value=1.3e-07 Score=65.80 Aligned_cols=44 Identities=25% Similarity=0.286 Sum_probs=40.3
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
-.+|++|+||||+++||+|+.++++.|++. |++.+.+++++..+
T Consensus 118 di~~r~vilvDd~laTG~T~~~ai~~L~~~---G~~~I~~~~lv~~~ 161 (208)
T 2e55_A 118 ELKGKIVVILDPMLATGGTLEVALREILKH---SPLKVKSVHAIAAP 161 (208)
T ss_dssp CCBTSEEEEECSEESSSHHHHHHHHHHHTT---CBSEEEEEEEEECH
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHHHHc---CCCEEEEEEEEECH
Confidence 347899999999999999999999999999 99999999988754
No 47
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=98.59 E-value=2.3e-08 Score=76.45 Aligned_cols=40 Identities=18% Similarity=0.101 Sum_probs=36.9
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKM 70 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~ 70 (78)
..+|++||||||+++||+|+.+++++|+++ |++.+.++++
T Consensus 356 ~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~---Ga~~V~~~~l 395 (504)
T 1ecf_A 356 EFRDKNVLLVDDSIVRGTTSEQIIEMAREA---GAKKVYLASA 395 (504)
T ss_dssp GTTTCCEEEEESCCSSSHHHHHHHHHHHHT---TCSSEEEEES
T ss_pred cCCCCeEEEEeccccccHHHHHHHHHHHhc---CCcEEEEEEE
Confidence 358999999999999999999999999999 9998888775
No 48
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=98.58 E-value=1.6e-07 Score=65.43 Aligned_cols=43 Identities=33% Similarity=0.389 Sum_probs=39.7
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
.+|++|+||||+++||+|+.++++.|++. |++.+.+++++..+
T Consensus 121 i~~r~VilvDd~laTG~T~~~ai~~L~~~---G~~~I~~~~lv~~p 163 (208)
T 2ehj_A 121 IDERMALIVDPMLATGGSVIATIDLLKKA---GCSSIKVLVLVAAP 163 (208)
T ss_dssp GGGCEEEEEEEEESSCHHHHHHHHHHHHT---TCCEEEEEEEEECH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHc---CCCEEEEEEEEeCH
Confidence 46899999999999999999999999999 99999999988754
No 49
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=98.57 E-value=5.7e-08 Score=72.64 Aligned_cols=41 Identities=22% Similarity=0.134 Sum_probs=37.4
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEe
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVL 72 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~ 72 (78)
.+|++|+||||+++||+|+.++++.|++. |++.+.+++...
T Consensus 270 v~Gk~viiVDDii~TG~Tl~~a~~~L~~~---Ga~~v~~~~tH~ 310 (379)
T 2ji4_A 270 VGGRIAIIVDDIIDDVDSFLAAAETLKER---GAYKIFVMATHG 310 (379)
T ss_dssp CTTSEEEEEEEEECSCHHHHHHHHHHHHT---TCCEEEEEEEEE
T ss_pred CCCCEEEEEecCCCchHHHHHHHHHHHhc---CCCEEEEEEEee
Confidence 58999999999999999999999999999 999888877543
No 50
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=98.56 E-value=6.4e-08 Score=71.44 Aligned_cols=40 Identities=23% Similarity=0.110 Sum_probs=37.2
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEE
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMV 71 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v 71 (78)
.+|++|+||||+++||+|+.++++.|++. |++.+.+++.-
T Consensus 211 v~gk~viIVDDii~TG~Tl~~a~~~L~~~---Ga~~v~~~~tH 250 (326)
T 3s5j_B 211 VKDRVAILVDDMADTCGTICHAADKLLSA---GATRVYAILTH 250 (326)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHHT---TCSEEEEEEEE
T ss_pred CCCCEEEEEccccCCcHHHHHHHHHHHHc---CCCEEEEEEEe
Confidence 48999999999999999999999999999 99998888853
No 51
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=98.55 E-value=5.7e-08 Score=71.44 Aligned_cols=41 Identities=27% Similarity=0.277 Sum_probs=37.3
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEe
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVL 72 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~ 72 (78)
.+|++|+||||+++||+|+.++++.|++. |++.+.+++...
T Consensus 214 v~gk~viiVDDii~TG~Tl~~a~~~L~~~---Ga~~v~~~~tH~ 254 (319)
T 3dah_A 214 VEGRTCVIMDDMVDTAGTLCKAAQVLKER---GAKQVFAYATHP 254 (319)
T ss_dssp -CCSEEEEEEEEESSCHHHHHHHHHHHHT---TCSCEEEEEEEE
T ss_pred CCCCEEEEEecccCchHHHHHHHHHHHHc---CCCEEEEEEEee
Confidence 47999999999999999999999999999 999888888654
No 52
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=98.53 E-value=1.9e-07 Score=65.66 Aligned_cols=44 Identities=16% Similarity=0.219 Sum_probs=39.6
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
-.+|++|+||||+++||+|+.++++.|++. |++.+.+++++..+
T Consensus 133 di~gr~VilvDd~laTG~Tl~~ai~~L~~~---G~~~I~~~~lv~~~ 176 (221)
T 1o5o_A 133 LNDDKEVFLLDPMLATGVSSIKAIEILKEN---GAKKITLVALIAAP 176 (221)
T ss_dssp CCTTCEEEEECSEESSSHHHHHHHHHHHHT---TCCEEEEECSEECH
T ss_pred ccCCCEEEEECCccccHHHHHHHHHHHHHc---CCCEEEEEEEEeCH
Confidence 357899999999999999999999999999 99988888887653
No 53
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.46 E-value=1.1e-07 Score=66.34 Aligned_cols=43 Identities=26% Similarity=0.287 Sum_probs=39.3
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLL 74 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~ 74 (78)
.+|++|+||||+++||+|+.++++.|++. |++.+.+++++..+
T Consensus 121 i~~r~vilvDd~laTG~T~~~ai~~L~~~---G~~~I~~~~lv~~~ 163 (208)
T 1v9s_A 121 IAERRAFLLDPMLATGGSASLALSLLKER---GATGVKLMAILAAP 163 (208)
T ss_dssp GGGSCEEEECSEESSSHHHHHHHHHHHHT---TCCSCEEEEEEECH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHc---CCCEEEEEEEEeCH
Confidence 46899999999999999999999999999 99988888888754
No 54
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.43 E-value=3.9e-07 Score=64.92 Aligned_cols=43 Identities=19% Similarity=0.238 Sum_probs=38.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCC--eEEEEEEEEecC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNF--HLERCQKMVLLL 74 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~--~~~~~~~~v~~~ 74 (78)
.+|++|+||||+++||+|+.++++.|++. |+ +.+.+++++..+
T Consensus 154 i~~r~VilvDdmlaTG~T~~~ai~~L~~~---G~~p~~I~~~~lvaap 198 (243)
T 1bd3_D 154 IRERWVMLLDPMCATAGSVCKAIEVLLRL---GVKEERIIFVNILAAP 198 (243)
T ss_dssp GGGSEEEEECSEESSCHHHHHHHHHHHHH---TCCGGGEEEEEEEECH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHc---CCCcceEEEEEEEeCH
Confidence 46899999999999999999999999999 99 888888887653
No 55
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.30 E-value=2.5e-07 Score=64.93 Aligned_cols=42 Identities=24% Similarity=0.178 Sum_probs=37.0
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCC--eEEEEEEEEec
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNF--HLERCQKMVLL 73 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~--~~~~~~~~v~~ 73 (78)
.++++|+|+||+++||+|+.+|++.|++. |+ +.+.++|++..
T Consensus 127 i~~~~VilvD~~laTG~T~~~ai~~L~~~---G~pe~~I~~~~~vaa 170 (217)
T 3dmp_A 127 LEDRIFILCDPMVATGYSAAHAIDVLKRR---GVPGERLMFLALVAA 170 (217)
T ss_dssp CTTCEEEEECSEESSSHHHHHHHHHHHTT---TCCGGGEEEECSEEC
T ss_pred CCCCEEEEEcCcccccHHHHHHHHHHHHc---CCCcCeEEEEEEEeC
Confidence 46899999999999999999999999999 98 77777776653
No 56
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=98.29 E-value=5e-07 Score=63.59 Aligned_cols=39 Identities=13% Similarity=0.261 Sum_probs=33.9
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEecCC
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVLLLE 75 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~~~~ 75 (78)
.+|++||||||+++||+|+.++++.|++ +.++++++++.
T Consensus 116 v~Gk~VLIVDDIidTG~Tl~~a~~~L~~--------V~vavLl~k~~ 154 (230)
T 1dqn_A 116 KEKREVVLIDEYVDSGHTIFSIQEQIKH--------AKICSCFVKDV 154 (230)
T ss_dssp HHCSSEEEEEEEESSSHHHHHHHHHSTT--------CEEEEEEESCH
T ss_pred CCCCEEEEEeeEcChHHHHHHHHHHhhc--------CEEEEEEECCc
Confidence 4799999999999999999999999976 55667888764
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=97.71 E-value=3.4e-05 Score=53.94 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=32.5
Q ss_pred CCCC--EEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEEe
Q 034952 29 QAGE--RALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMVL 72 (78)
Q Consensus 29 ~~g~--~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v~ 72 (78)
.+++ +|+|+||+++||+|+.+|++.|++ | ..+.+.++|++.
T Consensus 129 i~~~~~~VilvDp~laTG~T~~~ai~~L~~--G-~p~~I~~~~~va 171 (216)
T 1xtt_A 129 IRAKVDNVIIADPMIATASTMLKVLEEVVK--A-NPKRIYIVSIIS 171 (216)
T ss_dssp CCTTTCEEEEECSEESSSHHHHHHHHHHGG--G-CCSEEEEECSEE
T ss_pred ccCCcceEEEEcCCccchHHHHHHHHHHHh--C-CCCeEEEEEEec
Confidence 3567 999999999999999999999987 3 225666665553
No 58
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=70.50 E-value=6.8 Score=24.30 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=20.4
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
..++-|||||||=-+.-.. ..+.|++. |..++
T Consensus 9 m~k~~rILiVDD~~~~r~~---l~~~L~~~---G~~~v 40 (134)
T 3to5_A 9 LNKNMKILIVDDFSTMRRI---VKNLLRDL---GFNNT 40 (134)
T ss_dssp CCTTCCEEEECSCHHHHHH---HHHHHHHT---TCCCE
T ss_pred hCCCCEEEEEeCCHHHHHH---HHHHHHHc---CCcEE
Confidence 3456799999996655443 34455666 76533
No 59
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=63.71 E-value=18 Score=20.45 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=17.2
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
+.+|+||||=-.... ...+.|++. |.++.
T Consensus 2 ~~~ilivdd~~~~~~---~l~~~L~~~---g~~v~ 30 (120)
T 3f6p_A 2 DKKILVVDDEKPIAD---ILEFNLRKE---GYEVH 30 (120)
T ss_dssp CCEEEEECSCHHHHH---HHHHHHHHT---TCEEE
T ss_pred CCeEEEEECCHHHHH---HHHHHHHhC---CEEEE
Confidence 358999998544333 334455566 66544
No 60
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=61.90 E-value=20 Score=20.37 Aligned_cols=28 Identities=18% Similarity=0.170 Sum_probs=17.1
Q ss_pred CEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 32 ERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 32 ~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
++||||||=-..- ....+.|++. |.++.
T Consensus 3 ~~ILivdd~~~~~---~~l~~~l~~~---g~~v~ 30 (122)
T 3gl9_A 3 KKVLLVDDSAVLR---KIVSFNLKKE---GYEVI 30 (122)
T ss_dssp CEEEEECSCHHHH---HHHHHHHHHT---TCEEE
T ss_pred ceEEEEeCCHHHH---HHHHHHHHHC---CcEEE
Confidence 5899999854433 3344555666 66554
No 61
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=59.21 E-value=22 Score=20.07 Aligned_cols=30 Identities=17% Similarity=0.135 Sum_probs=19.4
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
++.+||||||=-..... ..+.|.+. |..+.
T Consensus 6 ~~~~ilivdd~~~~~~~---l~~~L~~~---g~~v~ 35 (130)
T 3eod_A 6 VGKQILIVEDEQVFRSL---LDSWFSSL---GATTV 35 (130)
T ss_dssp TTCEEEEECSCHHHHHH---HHHHHHHT---TCEEE
T ss_pred CCCeEEEEeCCHHHHHH---HHHHHHhC---CceEE
Confidence 57799999996554433 44556666 66554
No 62
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=57.39 E-value=24 Score=20.39 Aligned_cols=30 Identities=20% Similarity=0.443 Sum_probs=17.5
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
++.+||||||=-..-. ...+.|.+. |.++.
T Consensus 4 ~~~~ilivdd~~~~~~---~l~~~L~~~---g~~v~ 33 (140)
T 3h5i_A 4 KDKKILIVEDSKFQAK---TIANILNKY---GYTVE 33 (140)
T ss_dssp --CEEEEECSCHHHHH---HHHHHHHHT---TCEEE
T ss_pred CCcEEEEEeCCHHHHH---HHHHHHHHc---CCEEE
Confidence 3578999999554433 344455566 66544
No 63
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=56.92 E-value=16 Score=21.08 Aligned_cols=36 Identities=6% Similarity=-0.064 Sum_probs=31.3
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
.+..|++++=|+..-..|.|..++.++|++. |-++.
T Consensus 40 Gl~~GD~Il~VNG~~v~~~~~~evv~llr~~---g~~V~ 75 (82)
T 1r6j_A 40 GLLTEHNICEINGQNVIGLKDSQIADILSTS---GTVVT 75 (82)
T ss_dssp TCCSSEEEEEETTEECTTCCHHHHHHHHHHS---CSEEE
T ss_pred CCCCCCEEEEECCEEcCCCCHHHHHHHHhcC---CCEEE
Confidence 3568999999999999999999999999977 76543
No 64
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=55.03 E-value=26 Score=19.70 Aligned_cols=30 Identities=33% Similarity=0.492 Sum_probs=17.7
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
+..+||||||=-.....+ .+.|.+. |..+.
T Consensus 5 ~~~~ilivdd~~~~~~~l---~~~L~~~---g~~v~ 34 (132)
T 3lte_A 5 QSKRILVVDDDQAMAAAI---ERVLKRD---HWQVE 34 (132)
T ss_dssp --CEEEEECSCHHHHHHH---HHHHHHT---TCEEE
T ss_pred CCccEEEEECCHHHHHHH---HHHHHHC---CcEEE
Confidence 467999999965554444 4445556 66554
No 65
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=54.49 E-value=27 Score=22.10 Aligned_cols=26 Identities=31% Similarity=0.411 Sum_probs=16.8
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhch
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRF 57 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~ 57 (78)
..+.+||||||=-..-. ...++|++.
T Consensus 59 ~~~~~ILiVdDd~~~~~---~l~~~L~~~ 84 (206)
T 3mm4_A 59 LRGKRVLVVDDNFISRK---VATGKLKKM 84 (206)
T ss_dssp TTTCEEEEECSCHHHHH---HHHHHHHHT
T ss_pred cCCCEEEEEeCCHHHHH---HHHHHHHHc
Confidence 35679999999654433 344555566
No 66
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=53.60 E-value=30 Score=20.24 Aligned_cols=31 Identities=23% Similarity=0.280 Sum_probs=20.1
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
....+||||||=-.. .....+.|.+. |..+.
T Consensus 12 ~~~~~ILivdd~~~~---~~~l~~~L~~~---g~~v~ 42 (153)
T 3hv2_A 12 TRRPEILLVDSQEVI---LQRLQQLLSPL---PYTLH 42 (153)
T ss_dssp CSCCEEEEECSCHHH---HHHHHHHHTTS---SCEEE
T ss_pred cCCceEEEECCCHHH---HHHHHHHhccc---CcEEE
Confidence 456799999996544 34445566666 66554
No 67
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=53.44 E-value=25 Score=20.34 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=20.8
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCC-CeEEE
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFN-FHLER 66 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g-~~~~~ 66 (78)
.++.+||||||=-..-.. ..+.|.+. | ..+..
T Consensus 18 ~~~~~ilivdd~~~~~~~---l~~~L~~~---g~~~v~~ 50 (146)
T 4dad_A 18 QGMINILVASEDASRLAH---LARLVGDA---GRYRVTR 50 (146)
T ss_dssp GGGCEEEEECSCHHHHHH---HHHHHHHH---CSCEEEE
T ss_pred CCCCeEEEEeCCHHHHHH---HHHHHhhC---CCeEEEE
Confidence 467899999996555444 44555666 6 55544
No 68
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=50.76 E-value=36 Score=20.03 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=18.4
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
+..+||||||=-.... ...+.|++. |..+.
T Consensus 6 ~~~~ILivdd~~~~~~---~l~~~L~~~---g~~v~ 35 (154)
T 3gt7_A 6 RAGEILIVEDSPTQAE---HLKHILEET---GYQTE 35 (154)
T ss_dssp -CCEEEEECSCHHHHH---HHHHHHHTT---TCEEE
T ss_pred CCCcEEEEeCCHHHHH---HHHHHHHHC---CCEEE
Confidence 4578999999554433 344555666 66543
No 69
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=49.31 E-value=36 Score=19.58 Aligned_cols=29 Identities=24% Similarity=0.228 Sum_probs=17.9
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
..+||||||=-.....+ .+.|++. |..+.
T Consensus 4 ~~~iLivdd~~~~~~~l---~~~L~~~---g~~v~ 32 (136)
T 3t6k_A 4 PHTLLIVDDDDTVAEML---ELVLRGA---GYEVR 32 (136)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHT---TCEEE
T ss_pred CCEEEEEeCCHHHHHHH---HHHHHHC---CCEEE
Confidence 46899999965544443 4445556 66554
No 70
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=48.80 E-value=36 Score=19.40 Aligned_cols=31 Identities=13% Similarity=0.089 Sum_probs=18.9
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
..++.+|+||||=-.....+ .+.|.+. |.++
T Consensus 12 ~~~~~~ilivdd~~~~~~~l---~~~L~~~---g~~v 42 (138)
T 2b4a_A 12 HMQPFRVTLVEDEPSHATLI---QYHLNQL---GAEV 42 (138)
T ss_dssp --CCCEEEEECSCHHHHHHH---HHHHHHT---TCEE
T ss_pred CCCCCeEEEECCCHHHHHHH---HHHHHHc---CCEE
Confidence 35788999999966554444 4445555 6544
No 71
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=48.12 E-value=38 Score=19.70 Aligned_cols=30 Identities=27% Similarity=0.248 Sum_probs=16.3
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
.+.+||||||=-..-. ...+.|.+. |..+.
T Consensus 13 ~~~~iLivdd~~~~~~---~l~~~L~~~---g~~v~ 42 (143)
T 3m6m_D 13 RSMRMLVADDHEANRM---VLQRLLEKA---GHKVL 42 (143)
T ss_dssp --CEEEEECSSHHHHH---HHHHHHHC-----CEEE
T ss_pred ccceEEEEeCCHHHHH---HHHHHHHHc---CCeEE
Confidence 4578999999654433 344455566 66554
No 72
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=47.57 E-value=28 Score=20.89 Aligned_cols=43 Identities=9% Similarity=0.079 Sum_probs=34.2
Q ss_pred cccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEEEEE
Q 034952 26 CAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQKMV 71 (78)
Q Consensus 26 ~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~~~v 71 (78)
+.+..|+.++=|+..-..|-+..++.++|++. .....-.+.++
T Consensus 45 g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~---~~g~~~~L~lv 87 (95)
T 3gge_A 45 KTICVGDHIESINGENIVGWRHYDVAKKLKEL---KKEELFTMKLI 87 (95)
T ss_dssp TTCCTTCEEEEETTEECTTCCHHHHHHHHHHS---CTTCEEEEEEE
T ss_pred CCCCCCCEEEEECCEEccCCCHHHHHHHHHhC---CCCCEEEEEEE
Confidence 45678999999999999999999999999996 44334444444
No 73
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=47.48 E-value=37 Score=19.21 Aligned_cols=31 Identities=26% Similarity=0.198 Sum_probs=19.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
+..+||||||=-.....+ .+.|++. |.++..
T Consensus 6 ~~~~ilivdd~~~~~~~l---~~~L~~~---g~~v~~ 36 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNREAL---ILYLKSR---GIDAVG 36 (136)
T ss_dssp -CCEEEEECSCHHHHHHH---HHHHHHT---TCCEEE
T ss_pred CCCeEEEECCCHHHHHHH---HHHHHHc---CceEEE
Confidence 457999999965554444 4455556 665543
No 74
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=47.13 E-value=23 Score=23.40 Aligned_cols=33 Identities=12% Similarity=-0.020 Sum_probs=23.3
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
...|++|+||||=-+.. ....+.|.+. |.++..
T Consensus 8 ~l~~~~vlvv~d~~~~~---~~l~~~L~~~---g~~v~~ 40 (254)
T 2ayx_A 8 GLSGKRCWLAVRNASLC---QFLETSLQRS---GIVVTT 40 (254)
T ss_dssp TTTTEEEEEECCCHHHH---HHHHHHHTTT---TEEEEE
T ss_pred ccCCCEEEEEcCCHHHH---HHHHHHHHHC---CCEEEE
Confidence 35799999999965443 4455667777 887754
No 75
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=47.03 E-value=36 Score=18.99 Aligned_cols=29 Identities=34% Similarity=0.430 Sum_probs=16.6
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
..+||||||=-..... ..+.|++. |..+.
T Consensus 3 ~~~ilivdd~~~~~~~---l~~~L~~~---g~~v~ 31 (127)
T 3i42_A 3 LQQALIVEDYQAAAET---FKELLEML---GFQAD 31 (127)
T ss_dssp CEEEEEECSCHHHHHH---HHHHHHHT---TEEEE
T ss_pred cceEEEEcCCHHHHHH---HHHHHHHc---CCCEE
Confidence 3588999985544333 34445555 55443
No 76
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=46.02 E-value=40 Score=19.17 Aligned_cols=30 Identities=20% Similarity=0.172 Sum_probs=18.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
+..+||||||=-..-.. ..+.|.+. |..+.
T Consensus 5 ~~~~iLivdd~~~~~~~---l~~~l~~~---g~~v~ 34 (140)
T 3grc_A 5 PRPRILICEDDPDIARL---LNLMLEKG---GFDSD 34 (140)
T ss_dssp CCSEEEEECSCHHHHHH---HHHHHHHT---TCEEE
T ss_pred CCCCEEEEcCCHHHHHH---HHHHHHHC---CCeEE
Confidence 45799999996544443 44555566 66543
No 77
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=45.30 E-value=42 Score=19.17 Aligned_cols=31 Identities=16% Similarity=0.163 Sum_probs=19.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
...+||||||=-... ....+.|++. |.++..
T Consensus 5 ~~~~ilivdd~~~~~---~~l~~~L~~~---g~~v~~ 35 (136)
T 3kto_A 5 HHPIIYLVDHQKDAR---AALSKLLSPL---DVTIQC 35 (136)
T ss_dssp --CEEEEECSCHHHH---HHHHHHHTTS---SSEEEE
T ss_pred CCCeEEEEcCCHHHH---HHHHHHHHHC---CcEEEE
Confidence 346999999955443 3445566677 776553
No 78
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=45.21 E-value=41 Score=19.07 Aligned_cols=30 Identities=17% Similarity=0.196 Sum_probs=19.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
++.+||||||=-..-..+. +.|.+. |.++.
T Consensus 6 ~~~~ILivdd~~~~~~~l~---~~L~~~---g~~v~ 35 (136)
T 1dcf_A 6 TGLKVLVMDENGVSRMVTK---GLLVHL---GCEVT 35 (136)
T ss_dssp TTCEEEEECSCHHHHHHHH---HHHHHT---TCEEE
T ss_pred CCCeEEEEeCCHHHHHHHH---HHHHHc---CCeEE
Confidence 5679999999765544443 444455 66543
No 79
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=43.03 E-value=30 Score=19.88 Aligned_cols=31 Identities=13% Similarity=0.160 Sum_probs=25.2
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
+.+++.|+++++ +|.....+...|++. |.+-
T Consensus 49 l~~~~~ivvyc~---~g~rs~~a~~~L~~~---G~~~ 79 (106)
T 3hix_A 49 LEKSRDIYVYGA---GDEQTSQAVNLLRSA---GFEH 79 (106)
T ss_dssp SCTTSCEEEECS---SHHHHHHHHHHHHHT---TCSC
T ss_pred CCCCCeEEEEEC---CCChHHHHHHHHHHc---CCcC
Confidence 457788999886 788888899999999 8753
No 80
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=42.82 E-value=39 Score=18.10 Aligned_cols=29 Identities=10% Similarity=0.218 Sum_probs=15.9
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
+.+|+|+||=-.....+ .+.|.+. |.++.
T Consensus 1 ~~~iliv~~~~~~~~~l---~~~l~~~---g~~v~ 29 (119)
T 2j48_A 1 AGHILLLEEEDEAATVV---CEMLTAA---GFKVI 29 (119)
T ss_dssp CCEEEEECCCHHHHHHH---HHHHHHT---TCEEE
T ss_pred CCEEEEEeCCHHHHHHH---HHHHHhC---CcEEE
Confidence 35788888754443333 3444455 55544
No 81
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=42.41 E-value=44 Score=18.64 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=14.4
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhch
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRF 57 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~ 57 (78)
+.+||||||=-.....+ .+.|.+.
T Consensus 2 ~~~ilivdd~~~~~~~l---~~~L~~~ 25 (140)
T 1k68_A 2 HKKIFLVEDNKADIRLI---QEALANS 25 (140)
T ss_dssp CCEEEEECCCHHHHHHH---HHHHHTC
T ss_pred CCeEEEEeCCHHHHHHH---HHHHHhc
Confidence 56899999865444443 3444455
No 82
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=42.39 E-value=35 Score=20.90 Aligned_cols=31 Identities=13% Similarity=0.192 Sum_probs=25.4
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCe
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFH 63 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~ 63 (78)
.+.+++.|+++++ +|.....+...|++. |..
T Consensus 52 ~l~~~~~ivvyC~---~g~rs~~aa~~L~~~---G~~ 82 (141)
T 3ilm_A 52 SLEKSRDIYVYGA---GDEQTSQAVNLLRSA---GFE 82 (141)
T ss_dssp TSCTTSEEEEECS---SHHHHHHHHHHHHHT---TCC
T ss_pred cCCCCCeEEEEEC---CChHHHHHHHHHHHc---CCC
Confidence 3457789999887 788888899999998 875
No 83
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=41.07 E-value=49 Score=18.76 Aligned_cols=30 Identities=3% Similarity=0.041 Sum_probs=19.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCC-CeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFN-FHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g-~~~~ 65 (78)
...+||||||=-..... ..+.|++. | .++.
T Consensus 13 ~~~~ilivdd~~~~~~~---l~~~L~~~---g~~~v~ 43 (135)
T 3snk_A 13 KRKQVALFSSDPNFKRD---VATRLDAL---AIYDVR 43 (135)
T ss_dssp CCEEEEEECSCHHHHHH---HHHHHHHT---SSEEEE
T ss_pred CCcEEEEEcCCHHHHHH---HHHHHhhc---CCeEEE
Confidence 45699999996554444 44555566 6 5544
No 84
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=40.16 E-value=8.6 Score=26.73 Aligned_cols=13 Identities=38% Similarity=0.488 Sum_probs=10.4
Q ss_pred EeccccchHHHHH
Q 034952 37 VDDLVATGGTLFA 49 (78)
Q Consensus 37 VDDvitTG~Ti~~ 49 (78)
|=|++.||+|+.+
T Consensus 146 IvDivsTG~TLra 158 (219)
T 1o63_A 146 IVDITETGRTLKE 158 (219)
T ss_dssp EEEEESSSHHHHH
T ss_pred eEEeeccHHHHHH
Confidence 4489999999864
No 85
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=40.09 E-value=50 Score=18.59 Aligned_cols=30 Identities=17% Similarity=0.253 Sum_probs=24.9
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCe
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFH 63 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~ 63 (78)
+.++++|++.. .+|.....+...|++. |.+
T Consensus 53 l~~~~~ivvyC---~~g~rs~~a~~~L~~~---G~~ 82 (100)
T 3foj_A 53 FNDNETYYIIC---KAGGRSAQVVQYLEQN---GVN 82 (100)
T ss_dssp SCTTSEEEEEC---SSSHHHHHHHHHHHTT---TCE
T ss_pred CCCCCcEEEEc---CCCchHHHHHHHHHHC---CCC
Confidence 45778999987 6888888999999999 873
No 86
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=39.86 E-value=57 Score=19.18 Aligned_cols=28 Identities=29% Similarity=0.300 Sum_probs=18.7
Q ss_pred CEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 32 ERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 32 ~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
.+||||||=-.. .....+.|++. |.+++
T Consensus 37 ~~Ilivdd~~~~---~~~l~~~L~~~---g~~v~ 64 (157)
T 3hzh_A 37 FNVLIVDDSVFT---VKQLTQIFTSE---GFNII 64 (157)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHT---TCEEE
T ss_pred eEEEEEeCCHHH---HHHHHHHHHhC---CCeEE
Confidence 499999995544 34445556677 77665
No 87
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=39.76 E-value=8.8 Score=26.35 Aligned_cols=13 Identities=62% Similarity=0.654 Sum_probs=10.3
Q ss_pred EeccccchHHHHH
Q 034952 37 VDDLVATGGTLFA 49 (78)
Q Consensus 37 VDDvitTG~Ti~~ 49 (78)
|=|++.||+|+.+
T Consensus 151 IvDivsTG~TLra 163 (206)
T 1ve4_A 151 VVDVVQTGATLRA 163 (206)
T ss_dssp EEEEESSSHHHHH
T ss_pred EEEeccCHHHHHH
Confidence 3489999999864
No 88
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=39.15 E-value=57 Score=18.98 Aligned_cols=33 Identities=18% Similarity=0.068 Sum_probs=26.0
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
.+.+++.++++- .+|.....+.+.|++. |.+.+
T Consensus 52 ~l~~~~~ivv~C---~~G~rS~~aa~~L~~~---G~~~~ 84 (103)
T 3iwh_A 52 SFNKNEIYYIVC---AGGVRSAKVVEYLEAN---GIDAV 84 (103)
T ss_dssp GCCTTSEEEEEC---SSSSHHHHHHHHHHTT---TCEEE
T ss_pred hhcCCCeEEEEC---CCCHHHHHHHHHHHHc---CCCEE
Confidence 345788888875 5788888899999999 88754
No 89
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=38.33 E-value=67 Score=19.57 Aligned_cols=29 Identities=31% Similarity=0.430 Sum_probs=17.9
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
...+||||||=-..-..+ .+.|.+. |..+
T Consensus 6 ~~~~iLivdd~~~~~~~l---~~~L~~~---g~~v 34 (184)
T 3rqi_A 6 SDKNFLVIDDNEVFAGTL---ARGLERR---GYAV 34 (184)
T ss_dssp -CCEEEEECSCHHHHHHH---HHHHHHT---TCEE
T ss_pred CCCeEEEEcCCHHHHHHH---HHHHHHC---CCEE
Confidence 356899999966554443 3445556 6654
No 90
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=38.02 E-value=38 Score=18.91 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=30.3
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
+.+|+.|+=|++.-.+|.|...+.+++++. +..+
T Consensus 40 L~~GD~Il~ing~~v~~~~~~~~~~~i~~~---~~~v 73 (88)
T 3e17_A 40 LHEGDIILKINGTVTENMSLTDARKLIEKS---RGKL 73 (88)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHT---TTEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeE
Confidence 788999999999999999999999999988 6643
No 91
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=37.96 E-value=40 Score=20.29 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=31.7
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
.+.+|++|+=|++.-..+-|...+.++|+.. +...+.
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---~~~~v~ 111 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKAL---PDGPVT 111 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTS---CSSEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCceEE
Confidence 5778999999999999999999999999988 665443
No 92
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=37.72 E-value=7.9 Score=26.59 Aligned_cols=12 Identities=50% Similarity=0.675 Sum_probs=9.8
Q ss_pred EeccccchHHHH
Q 034952 37 VDDLVATGGTLF 48 (78)
Q Consensus 37 VDDvitTG~Ti~ 48 (78)
|=|++.||+|+.
T Consensus 153 IvDivsTG~TLr 164 (208)
T 1z7m_E 153 IVDIVETGNTLS 164 (208)
T ss_dssp EEEEESSSHHHH
T ss_pred EEEEeCChHHHH
Confidence 448999999975
No 93
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=37.03 E-value=58 Score=18.48 Aligned_cols=30 Identities=7% Similarity=0.067 Sum_probs=19.1
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhc-hhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGR-FVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~-~~~~g~~~~ 65 (78)
...+||||||=-..-..+ .+.|++ . |.++.
T Consensus 3 ~~~~ilivdd~~~~~~~l---~~~L~~~~---~~~v~ 33 (140)
T 3lua_A 3 LDGTVLLIDYFEYEREKT---KIIFDNIG---EYDFI 33 (140)
T ss_dssp CCCEEEEECSCHHHHHHH---HHHHHHHC---CCEEE
T ss_pred CCCeEEEEeCCHHHHHHH---HHHHHhcc---CccEE
Confidence 356899999965554444 445555 5 66555
No 94
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=36.87 E-value=61 Score=18.64 Aligned_cols=31 Identities=16% Similarity=0.345 Sum_probs=25.2
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCe
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFH 63 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~ 63 (78)
.+.+++.|++.. .+|.....+...|++. |.+
T Consensus 51 ~l~~~~~ivvyC---~~G~rs~~aa~~L~~~---G~~ 81 (108)
T 3gk5_A 51 ILERDKKYAVIC---AHGNRSAAAVEFLSQL---GLN 81 (108)
T ss_dssp GSCTTSCEEEEC---SSSHHHHHHHHHHHTT---TCC
T ss_pred hCCCCCeEEEEc---CCCcHHHHHHHHHHHc---CCC
Confidence 345788899998 6888888899999999 873
No 95
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=36.38 E-value=40 Score=19.71 Aligned_cols=30 Identities=13% Similarity=0.266 Sum_probs=28.1
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhch
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRF 57 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~ 57 (78)
+.+|++|+=|++.-.++-|...+.++|++.
T Consensus 60 l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~ 89 (109)
T 1wi4_A 60 LKPGDQLVSINKESMIGVSFEEAKSIITRA 89 (109)
T ss_dssp CCTTCBEEEETTSCCTTCCHHHHHHHHHHS
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcc
Confidence 789999999999999999999999999888
No 96
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=36.35 E-value=63 Score=18.71 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=18.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
++.+||||||=-..... ..+.|.+. |.++.
T Consensus 6 ~~~~iLivdd~~~~~~~---l~~~L~~~---g~~v~ 35 (154)
T 2rjn_A 6 KNYTVMLVDDEQPILNS---LKRLIKRL---GCNII 35 (154)
T ss_dssp SCCEEEEECSCHHHHHH---HHHHHHTT---TCEEE
T ss_pred CCCeEEEEcCCHHHHHH---HHHHHHHc---CCeEE
Confidence 46789999986544443 34445556 66554
No 97
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=36.08 E-value=64 Score=18.70 Aligned_cols=30 Identities=17% Similarity=0.210 Sum_probs=17.7
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
++.+||||||=-.....+. +.|.+. |..+.
T Consensus 2 ~~~~ILivdd~~~~~~~l~---~~L~~~---g~~v~ 31 (155)
T 1qkk_A 2 AAPSVFLIDDDRDLRKAMQ---QTLELA---GFTVS 31 (155)
T ss_dssp --CEEEEECSCHHHHHHHH---HHHHHT---TCEEE
T ss_pred CCCEEEEEeCCHHHHHHHH---HHHHHc---CcEEE
Confidence 3568999998755544444 444556 66554
No 98
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=34.30 E-value=64 Score=18.18 Aligned_cols=25 Identities=16% Similarity=0.158 Sum_probs=14.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhch
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRF 57 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~ 57 (78)
+..+||||||=-.. .....+.|++.
T Consensus 8 ~~~~iLivdd~~~~---~~~l~~~l~~~ 32 (146)
T 3ilh_A 8 KIDSVLLIDDDDIV---NFLNTTIIRMT 32 (146)
T ss_dssp CEEEEEEECSCHHH---HHHHHHHHHTT
T ss_pred ccceEEEEeCCHHH---HHHHHHHHHhc
Confidence 45689999985433 23334445555
No 99
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=34.28 E-value=65 Score=18.20 Aligned_cols=29 Identities=24% Similarity=0.297 Sum_probs=17.2
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
...+||||||=-..... ..+.|.+. |.++
T Consensus 6 ~~~~iLivdd~~~~~~~---l~~~L~~~---g~~v 34 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRIA---VKTILSDA---GFHI 34 (142)
T ss_dssp CCCEEEEECSCHHHHHH---HHHHHHHT---TCEE
T ss_pred CCCeEEEEcCCHHHHHH---HHHHHHHC---CeEE
Confidence 46789999986544433 33444555 5544
No 100
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=34.20 E-value=64 Score=18.14 Aligned_cols=30 Identities=20% Similarity=0.097 Sum_probs=24.1
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCe
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFH 63 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~ 63 (78)
+.+++.|++.. .+|.....+...|++. |.+
T Consensus 53 l~~~~~iv~yC---~~g~rs~~a~~~L~~~---G~~ 82 (103)
T 3eme_A 53 FNKNEIYYIVC---AGGVRSAKVVEYLEAN---GID 82 (103)
T ss_dssp CCTTSEEEEEC---SSSSHHHHHHHHHHTT---TCE
T ss_pred CCCCCeEEEEC---CCChHHHHHHHHHHHC---CCC
Confidence 45778999998 4787778889999999 873
No 101
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=33.92 E-value=64 Score=18.06 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=16.3
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
+.+|+||||=-.....+ .+.|.+. |..+
T Consensus 3 ~~~ilivdd~~~~~~~l---~~~L~~~---g~~v 30 (136)
T 1mvo_A 3 NKKILVVDDEESIVTLL---QYNLERS---GYDV 30 (136)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHT---TCEE
T ss_pred CCEEEEEECCHHHHHHH---HHHHHHC---CcEE
Confidence 46899999865444433 3444455 5554
No 102
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=33.64 E-value=67 Score=18.14 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=20.8
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
...+.+||||||=-.....+. +.|.+. |.++.
T Consensus 15 ~~~~~~ilivdd~~~~~~~l~---~~L~~~---g~~v~ 46 (137)
T 2pln_A 15 PRGSMRVLLIEKNSVLGGEIE---KGLNVK---GFMAD 46 (137)
T ss_dssp CTTCSEEEEECSCHHHHHHHH---HHHHHT---TCEEE
T ss_pred CCCCCeEEEEeCCHHHHHHHH---HHHHHc---CcEEE
Confidence 356789999999766555444 444456 66554
No 103
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=33.41 E-value=27 Score=24.65 Aligned_cols=20 Identities=25% Similarity=0.262 Sum_probs=17.8
Q ss_pred EEEEeccccchHHHHHHHHH
Q 034952 34 ALIVDDLVATGGTLFAAIRL 53 (78)
Q Consensus 34 vlIVDDvitTG~Ti~~~~~~ 53 (78)
=+|+|.+.-||.|+.+|.++
T Consensus 244 ~~vlDpF~GsGtt~~aa~~~ 263 (319)
T 1eg2_A 244 STVLDFFAGSGVTARVAIQE 263 (319)
T ss_dssp CEEEETTCTTCHHHHHHHHH
T ss_pred CEEEecCCCCCHHHHHHHHc
Confidence 37899999999999998876
No 104
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=33.40 E-value=65 Score=17.97 Aligned_cols=27 Identities=22% Similarity=0.225 Sum_probs=16.7
Q ss_pred EEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 33 RALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 33 ~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
+|+||||=-..-.. ..+.|.+. |..++
T Consensus 3 ~ilivdd~~~~~~~---l~~~L~~~---g~~v~ 29 (134)
T 3f6c_A 3 NAIIIDDHPLAIAA---IRNLLIKN---DIEIL 29 (134)
T ss_dssp EEEEECCCHHHHHH---HHHHHHHT---TEEEE
T ss_pred EEEEEcCCHHHHHH---HHHHHhhC---CcEEE
Confidence 78999986554444 44555566 65554
No 105
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=33.12 E-value=54 Score=20.48 Aligned_cols=26 Identities=19% Similarity=0.189 Sum_probs=22.6
Q ss_pred CEEEEEeccccchHHHHHHHHHHhch
Q 034952 32 ERALIVDDLVATGGTLFAAIRLLGRF 57 (78)
Q Consensus 32 ~~vlIVDDvitTG~Ti~~~~~~l~~~ 57 (78)
..+.++||-..+-..+.++++.|++.
T Consensus 35 ~g~~vi~DyaHnP~si~a~l~al~~~ 60 (163)
T 3mvn_A 35 NNITVYDDFAHHPTAITATIDALRAK 60 (163)
T ss_dssp TTEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHh
Confidence 45888999888999999999999973
No 106
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=32.98 E-value=14 Score=26.65 Aligned_cols=13 Identities=46% Similarity=0.578 Sum_probs=10.4
Q ss_pred EeccccchHHHHH
Q 034952 37 VDDLVATGGTLFA 49 (78)
Q Consensus 37 VDDvitTG~Ti~~ 49 (78)
|=|++.||+|+.+
T Consensus 158 IvDivsTG~TLra 170 (289)
T 2vd3_A 158 ITDLSSTGTTLRM 170 (289)
T ss_dssp EEEEESSTHHHHH
T ss_pred EEEEeCChHHHHH
Confidence 4489999999864
No 107
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=32.31 E-value=13 Score=26.77 Aligned_cols=13 Identities=62% Similarity=0.710 Sum_probs=10.4
Q ss_pred EeccccchHHHHH
Q 034952 37 VDDLVATGGTLFA 49 (78)
Q Consensus 37 VDDvitTG~Ti~~ 49 (78)
|=|++.||+|+.+
T Consensus 167 IvDivsTG~TLra 179 (299)
T 1h3d_A 167 ICDLVSTGATLEA 179 (299)
T ss_dssp EEEEESSCHHHHH
T ss_pred EEecccCHHHHHH
Confidence 4489999999864
No 108
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=32.23 E-value=43 Score=19.13 Aligned_cols=30 Identities=10% Similarity=0.090 Sum_probs=24.3
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCe
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFH 63 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~ 63 (78)
+.+++.|++..+ +|.....+...|++. |.+
T Consensus 55 l~~~~~ivvyc~---~g~rs~~a~~~L~~~---G~~ 84 (108)
T 1gmx_A 55 NDFDTPVMVMCY---HGNSSKGAAQYLLQQ---GYD 84 (108)
T ss_dssp SCTTSCEEEECS---SSSHHHHHHHHHHHH---TCS
T ss_pred cCCCCCEEEEcC---CCchHHHHHHHHHHc---CCc
Confidence 457889999986 677788888999998 875
No 109
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=32.04 E-value=72 Score=18.07 Aligned_cols=28 Identities=18% Similarity=0.018 Sum_probs=15.6
Q ss_pred CEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 32 ERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 32 ~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
.+||||||=-..- ....+.|.+. |..+.
T Consensus 4 ~~ilivdd~~~~~---~~l~~~l~~~---g~~v~ 31 (143)
T 3jte_A 4 AKILVIDDESTIL---QNIKFLLEID---GNEVL 31 (143)
T ss_dssp CEEEEECSCHHHH---HHHHHHHHHT---TCEEE
T ss_pred CEEEEEcCCHHHH---HHHHHHHHhC---CceEE
Confidence 5788888854333 3334444555 55443
No 110
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=31.78 E-value=69 Score=17.75 Aligned_cols=30 Identities=17% Similarity=0.066 Sum_probs=18.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
+..+|+||||=-.....+.. .|.+. |.++.
T Consensus 4 ~~~~ilivdd~~~~~~~l~~---~L~~~---g~~v~ 33 (132)
T 2rdm_A 4 EAVTILLADDEAILLLDFES---TLTDA---GFLVT 33 (132)
T ss_dssp SSCEEEEECSSHHHHHHHHH---HHHHT---TCEEE
T ss_pred CCceEEEEcCcHHHHHHHHH---HHHHc---CCEEE
Confidence 35689999986655544443 34455 65544
No 111
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=31.52 E-value=66 Score=17.42 Aligned_cols=30 Identities=10% Similarity=0.161 Sum_probs=24.2
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
.+++.++++.+ +|.....+...|++. |.+.
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~---G~~~ 68 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEM---GYTH 68 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHT---TCSS
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHc---CCCC
Confidence 56789999985 688888889999998 8753
No 112
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=31.39 E-value=74 Score=17.99 Aligned_cols=30 Identities=17% Similarity=0.098 Sum_probs=18.1
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
...+||||||=-..... ..+.|.+. |.++.
T Consensus 3 ~~~~iLivdd~~~~~~~---l~~~L~~~---g~~v~ 32 (142)
T 2qxy_A 3 LTPTVMVVDESRITFLA---VKNALEKD---GFNVI 32 (142)
T ss_dssp CCCEEEEECSCHHHHHH---HHHHHGGG---TCEEE
T ss_pred CCCeEEEEeCCHHHHHH---HHHHHHhC---CCEEE
Confidence 35689999986444333 44455566 66554
No 113
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=30.91 E-value=26 Score=24.57 Aligned_cols=21 Identities=29% Similarity=0.202 Sum_probs=17.9
Q ss_pred EEEEEeccccchHHHHHHHHH
Q 034952 33 RALIVDDLVATGGTLFAAIRL 53 (78)
Q Consensus 33 ~vlIVDDvitTG~Ti~~~~~~ 53 (78)
.=+|+|.+.-||.|+.+|.++
T Consensus 253 ~~~VlDpF~GsGtt~~aa~~~ 273 (323)
T 1boo_A 253 DDLVVDIFGGSNTTGLVAERE 273 (323)
T ss_dssp TCEEEETTCTTCHHHHHHHHT
T ss_pred CCEEEECCCCCCHHHHHHHHc
Confidence 347899999999999988765
No 114
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=30.53 E-value=72 Score=17.60 Aligned_cols=30 Identities=13% Similarity=0.202 Sum_probs=28.2
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhch
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRF 57 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~ 57 (78)
+.+|+.++=|++.-.+|.+...+.+++++.
T Consensus 47 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 76 (93)
T 3o46_A 47 IHVGDELREVNGIPVEDKRPEEIIQILAQS 76 (93)
T ss_dssp CCTTCEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 789999999999999999999999999888
No 115
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=30.32 E-value=15 Score=26.65 Aligned_cols=13 Identities=38% Similarity=0.611 Sum_probs=10.3
Q ss_pred EeccccchHHHHH
Q 034952 37 VDDLVATGGTLFA 49 (78)
Q Consensus 37 VDDvitTG~Ti~~ 49 (78)
|=|++.||+|+++
T Consensus 172 IvDiVsTG~TLra 184 (304)
T 1nh8_A 172 IADVVGSGRTLSQ 184 (304)
T ss_dssp EEEEESSSHHHHH
T ss_pred EEEEeCChHHHHH
Confidence 4489999999864
No 116
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=29.99 E-value=73 Score=17.50 Aligned_cols=36 Identities=3% Similarity=-0.025 Sum_probs=30.4
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
+.+|+.|+=||+.-.++.+...+.+++++. +.++.-
T Consensus 47 l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~~~~ 82 (95)
T 3r68_A 47 LKNNDLVVAVNGKSVEALDHDGVVEMIRKG---GDQTTL 82 (95)
T ss_dssp CCTTEEEEEETTEECTTCCHHHHHHHHHTT---TTEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEE
Confidence 678999999999988888888999999987 766543
No 117
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=29.93 E-value=1e+02 Score=21.13 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=25.2
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
.+.+|++|||. ..|+.=..++++++.. |++++.
T Consensus 173 ~~~~g~~VlV~----GaG~vG~~a~qla~~~---Ga~Vi~ 205 (348)
T 3two_A 173 KVTKGTKVGVA----GFGGLGSMAVKYAVAM---GAEVSV 205 (348)
T ss_dssp TCCTTCEEEEE----SCSHHHHHHHHHHHHT---TCEEEE
T ss_pred CCCCCCEEEEE----CCcHHHHHHHHHHHHC---CCeEEE
Confidence 35689999996 2377667888999988 997654
No 118
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=29.93 E-value=77 Score=17.74 Aligned_cols=31 Identities=23% Similarity=0.162 Sum_probs=19.7
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
...+||||||=-.....+. +.|++. |.++..
T Consensus 8 ~~~~iLivdd~~~~~~~l~---~~L~~~---g~~v~~ 38 (140)
T 3cg0_A 8 DLPGVLIVEDGRLAAATLR---IQLESL---GYDVLG 38 (140)
T ss_dssp CCCEEEEECCBHHHHHHHH---HHHHHH---TCEEEE
T ss_pred CCceEEEEECCHHHHHHHH---HHHHHC---CCeeEE
Confidence 4679999999655544444 444556 666653
No 119
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=29.19 E-value=1.1e+02 Score=19.51 Aligned_cols=30 Identities=23% Similarity=0.137 Sum_probs=18.8
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
+..+||||||=-..-.. ..+.|.+. |.++.
T Consensus 22 ~~~~ILivdd~~~~~~~---l~~~L~~~---g~~v~ 51 (250)
T 3r0j_A 22 PEARVLVVDDEANIVEL---LSVSLKFQ---GFEVY 51 (250)
T ss_dssp SSCEEEEECSCHHHHHH---HHHHHHHT---TCEEE
T ss_pred CCceEEEEECCHHHHHH---HHHHHHHC---CCEEE
Confidence 45799999996544433 34445556 66554
No 120
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=29.14 E-value=1.2e+02 Score=21.02 Aligned_cols=34 Identities=18% Similarity=0.338 Sum_probs=25.9
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERC 67 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~ 67 (78)
.+.+|++|||.- +|+.=..++++++.. |++++..
T Consensus 186 ~~~~g~~VlV~G----~G~vG~~a~qla~~~---Ga~Vi~~ 219 (363)
T 3uog_A 186 HLRAGDRVVVQG----TGGVALFGLQIAKAT---GAEVIVT 219 (363)
T ss_dssp CCCTTCEEEEES----SBHHHHHHHHHHHHT---TCEEEEE
T ss_pred CCCCCCEEEEEC----CCHHHHHHHHHHHHc---CCEEEEE
Confidence 356899999873 566667888999988 9976643
No 121
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=28.81 E-value=58 Score=19.71 Aligned_cols=29 Identities=14% Similarity=0.168 Sum_probs=19.7
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
.-|||||||=-..-..+.... ++. |.+++
T Consensus 8 ~~rILiVdD~~~~~~~l~~~L---~~~---G~~v~ 36 (123)
T 2lpm_A 8 RLRVLVVEDESMIAMLIEDTL---CEL---GHEVA 36 (123)
T ss_dssp CCCEEEESSSTTTSHHHHHHH---HHH---CCCCC
T ss_pred CCEEEEEeCCHHHHHHHHHHH---HHC---CCEEE
Confidence 458999999887776665544 455 65543
No 122
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=28.46 E-value=76 Score=17.17 Aligned_cols=26 Identities=19% Similarity=0.249 Sum_probs=14.5
Q ss_pred EEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 33 RALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 33 ~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
+|+||||=-.....+. +.+.+. |.++
T Consensus 3 ~ilivdd~~~~~~~l~---~~l~~~---~~~v 28 (120)
T 2a9o_A 3 KILIVDDEKPISDIIK---FNMTKE---GYEV 28 (120)
T ss_dssp EEEEECSCHHHHHHHH---HHHHHT---TCEE
T ss_pred eEEEEcCCHHHHHHHH---HHHHhc---CcEE
Confidence 6888888654443333 344445 5544
No 123
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=28.00 E-value=81 Score=17.34 Aligned_cols=27 Identities=26% Similarity=0.332 Sum_probs=15.5
Q ss_pred CEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 32 ERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 32 ~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
.+|+||||=-.....+ .+.|.+. |..+
T Consensus 4 ~~ilivdd~~~~~~~l---~~~l~~~---~~~v 30 (124)
T 1srr_A 4 EKILIVDDQSGIRILL---NEVFNKE---GYQT 30 (124)
T ss_dssp CEEEEECSCHHHHHHH---HHHHHTT---TCEE
T ss_pred ceEEEEeCCHHHHHHH---HHHHHHC---CcEE
Confidence 5788888865444333 3344455 5554
No 124
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=27.86 E-value=79 Score=17.20 Aligned_cols=29 Identities=28% Similarity=0.430 Sum_probs=17.1
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
+.+|+|+||=-.....+. +.|.+. |.+++
T Consensus 2 ~~~ilivdd~~~~~~~l~---~~l~~~---g~~vv 30 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMMLK---DIITKA---GYEVA 30 (120)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHHT---TCEEE
T ss_pred CceEEEEcCcHHHHHHHH---HHHhhc---CcEEE
Confidence 357999999655444443 344455 66543
No 125
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=27.72 E-value=85 Score=17.54 Aligned_cols=29 Identities=24% Similarity=0.037 Sum_probs=15.5
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
..+||||||=-.... ...+.|++. |.++.
T Consensus 3 ~~~ilivdd~~~~~~---~l~~~L~~~---g~~v~ 31 (140)
T 2qr3_A 3 LGTIIIVDDNKGVLT---AVQLLLKNH---FSKVI 31 (140)
T ss_dssp CCEEEEECSCHHHHH---HHHHHHTTT---SSEEE
T ss_pred CceEEEEeCCHHHHH---HHHHHHHhC---CcEEE
Confidence 357888887543333 333444555 55443
No 126
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=27.67 E-value=1e+02 Score=18.31 Aligned_cols=34 Identities=26% Similarity=0.285 Sum_probs=30.8
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
+.+|+.|+=|++.-.+|-|...+.+++++. +..+
T Consensus 72 L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~---~~~v 105 (118)
T 3b76_A 72 IKTGDILLNVDGVELTEVSRSEAVALLKRT---SSSI 105 (118)
T ss_dssp SCTTCEEEEETTEEGGGSCHHHHHHHHHSC---CSEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeE
Confidence 789999999999999999999999999988 7653
No 127
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=27.29 E-value=1.1e+02 Score=18.67 Aligned_cols=29 Identities=28% Similarity=0.355 Sum_probs=17.4
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
..+|+||||=-.....+. +.|.+. |..+.
T Consensus 4 ~~~ilivdd~~~~~~~l~---~~L~~~---g~~v~ 32 (208)
T 1yio_A 4 KPTVFVVDDDMSVREGLR---NLLRSA---GFEVE 32 (208)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHTT---TCEEE
T ss_pred CCEEEEEcCCHHHHHHHH---HHHHhC---CceEE
Confidence 458999998665544443 344455 65544
No 128
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=27.09 E-value=92 Score=17.68 Aligned_cols=25 Identities=28% Similarity=0.260 Sum_probs=14.9
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhch
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRF 57 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~ 57 (78)
...+||||||=-..- ....+.|++.
T Consensus 4 ~~~~ILivdd~~~~~---~~l~~~L~~~ 28 (144)
T 3kht_A 4 RSKRVLVVEDNPDDI---ALIRRVLDRK 28 (144)
T ss_dssp -CEEEEEECCCHHHH---HHHHHHHHHT
T ss_pred CCCEEEEEeCCHHHH---HHHHHHHHhc
Confidence 356899999954443 3344455555
No 129
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=26.96 E-value=1.3e+02 Score=20.94 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=23.9
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
+.+|++|||+ ..|+.=..++++++.. |++++.
T Consensus 192 ~~~g~~VlV~----GaG~vG~~aiqlak~~---Ga~Vi~ 223 (369)
T 1uuf_A 192 AGPGKKVGVV----GIGGLGHMGIKLAHAM---GAHVVA 223 (369)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHT---TCEEEE
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHC---CCEEEE
Confidence 4578999996 2366667788888888 997544
No 130
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=26.55 E-value=84 Score=17.05 Aligned_cols=28 Identities=29% Similarity=0.347 Sum_probs=16.8
Q ss_pred CEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 32 ERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 32 ~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
.+|+||||=-.....+ .+.|++. |.++.
T Consensus 6 ~~ilivdd~~~~~~~l---~~~L~~~---g~~v~ 33 (127)
T 2gkg_A 6 KKILIVESDTALSATL---RSALEGR---GFTVD 33 (127)
T ss_dssp CEEEEECSCHHHHHHH---HHHHHHH---TCEEE
T ss_pred CeEEEEeCCHHHHHHH---HHHHHhc---CceEE
Confidence 4899999865444443 4444555 66554
No 131
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=26.46 E-value=88 Score=17.29 Aligned_cols=18 Identities=28% Similarity=0.167 Sum_probs=11.7
Q ss_pred CCEEEEEeccccchHHHH
Q 034952 31 GERALIVDDLVATGGTLF 48 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~ 48 (78)
+.+|+||||=-.....+.
T Consensus 3 ~~~ilivdd~~~~~~~l~ 20 (126)
T 1dbw_A 3 DYTVHIVDDEEPVRKSLA 20 (126)
T ss_dssp CCEEEEEESSHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHH
Confidence 458888888655544443
No 132
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=26.35 E-value=92 Score=17.44 Aligned_cols=29 Identities=17% Similarity=0.101 Sum_probs=16.5
Q ss_pred CCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 31 GERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 31 g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
.-+||||||=-.....+ .+.|++. |..+.
T Consensus 7 ~~~ilivdd~~~~~~~l---~~~L~~~---~~~v~ 35 (137)
T 3hdg_A 7 ALKILIVEDDTDAREWL---STIISNH---FPEVW 35 (137)
T ss_dssp CCCEEEECSCHHHHHHH---HHHHHTT---CSCEE
T ss_pred ccEEEEEeCCHHHHHHH---HHHHHhc---CcEEE
Confidence 45899999855444433 3444445 55443
No 133
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=26.31 E-value=95 Score=19.82 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=30.5
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
+..|.+|+=|++.-.+|.|...+.++|+.. |..+
T Consensus 130 L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~---g~~v 163 (170)
T 3egg_C 130 IQVNDLLVEVDGTSLVGVTQSFAASVLRNT---KGRV 163 (170)
T ss_dssp CCTTCEEEEETTEECTTBCHHHHHHHHHHC---CSEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEE
Confidence 789999999999999999999999999987 7643
No 134
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=26.19 E-value=93 Score=17.79 Aligned_cols=31 Identities=10% Similarity=0.215 Sum_probs=24.7
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
+.+++.|++.. .+|.....+...|++. |.+.
T Consensus 53 ~~~~~~ivvyC---~~G~rs~~aa~~L~~~---G~~~ 83 (110)
T 2k0z_A 53 QHKDKKVLLHC---RAGRRALDAAKSMHEL---GYTP 83 (110)
T ss_dssp SCSSSCEEEEC---SSSHHHHHHHHHHHHT---TCCC
T ss_pred cCCCCEEEEEe---CCCchHHHHHHHHHHC---CCCE
Confidence 45788899988 5788888889999998 8653
No 135
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=26.06 E-value=98 Score=17.68 Aligned_cols=30 Identities=20% Similarity=0.379 Sum_probs=27.6
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhch
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRF 57 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~ 57 (78)
+.+|++|+=|++.-.++.|...+.++++..
T Consensus 63 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp CCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 789999999999998888999999999886
No 136
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=25.67 E-value=89 Score=17.04 Aligned_cols=28 Identities=21% Similarity=0.224 Sum_probs=16.1
Q ss_pred CEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 32 ERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 32 ~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
++|+||||=-.....+.. .|.+. |.++.
T Consensus 2 ~~ilivdd~~~~~~~l~~---~L~~~---~~~v~ 29 (124)
T 1mb3_A 2 KKVLIVEDNELNMKLFHD---LLEAQ---GYETL 29 (124)
T ss_dssp CEEEEECSCHHHHHHHHH---HHHHT---TCEEE
T ss_pred cEEEEEcCCHHHHHHHHH---HHHHc---CcEEE
Confidence 478888886555444433 34445 55543
No 137
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=25.13 E-value=1.4e+02 Score=20.49 Aligned_cols=36 Identities=14% Similarity=0.219 Sum_probs=26.6
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQ 68 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~ 68 (78)
.+.+|++|||. -.+|+.=..++++++.. |++++.+.
T Consensus 164 ~~~~g~~VlV~---Ga~G~vG~~aiqlak~~---Ga~vi~~~ 199 (357)
T 1zsy_A 164 QLQPGDSVIQN---ASNSGVGQAVIQIAAAL---GLRTINVV 199 (357)
T ss_dssp CCCTTCEEEES---STTSHHHHHHHHHHHHH---TCEEEEEE
T ss_pred ccCCCCEEEEe---CCcCHHHHHHHHHHHHc---CCEEEEEe
Confidence 45688999884 34577777888999999 99866543
No 138
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=25.11 E-value=1.3e+02 Score=20.27 Aligned_cols=30 Identities=13% Similarity=0.185 Sum_probs=20.2
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
.+.+||+|||=-..- ....+.|++. |.++.
T Consensus 159 l~~rILvVdD~~~~~---~~l~~~L~~~---g~~v~ 188 (286)
T 3n0r_A 159 LATEVLIIEDEPVIA---ADIEALVREL---GHDVT 188 (286)
T ss_dssp CCCEEEEECCSHHHH---HHHHHHHHHT---TCEEE
T ss_pred CCCcEEEEcCCHHHH---HHHHHHhhcc---CceEE
Confidence 356999999955443 3344566677 87776
No 139
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=25.02 E-value=1e+02 Score=17.46 Aligned_cols=28 Identities=21% Similarity=0.205 Sum_probs=16.2
Q ss_pred CEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 32 ERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 32 ~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
.+||||||=-.....+.. .|.+. |..+.
T Consensus 4 ~~ILivdd~~~~~~~l~~---~L~~~---g~~v~ 31 (138)
T 3c3m_A 4 YTILVVDDSPMIVDVFVT---MLERG---GYRPI 31 (138)
T ss_dssp CEEEEECSCHHHHHHHHH---HHHHT---TCEEE
T ss_pred ceEEEEeCCHHHHHHHHH---HHHHc---CceEE
Confidence 478888886655444443 34445 55543
No 140
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=25.00 E-value=1e+02 Score=17.65 Aligned_cols=14 Identities=7% Similarity=0.259 Sum_probs=9.1
Q ss_pred CCEEEEEeccccch
Q 034952 31 GERALIVDDLVATG 44 (78)
Q Consensus 31 g~~vlIVDDvitTG 44 (78)
..+||||||=-..-
T Consensus 4 ~~~ILivddd~~~~ 17 (152)
T 3heb_A 4 SVTIVMIEDDLGHA 17 (152)
T ss_dssp -CEEEEECCCHHHH
T ss_pred CceEEEEeCCHHHH
Confidence 45899999854433
No 141
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=24.76 E-value=1.1e+02 Score=17.97 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=30.5
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCe
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFH 63 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~ 63 (78)
.+.+|.+|+=|++.-.++.+...+.++++.. +.+
T Consensus 71 gL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~---~~~ 104 (120)
T 2iwo_A 71 KLRVGDRIVTICGTSTEGMTHTQAVNLLKNA---SGS 104 (120)
T ss_dssp CCCTTCEEEEETTEECTTCBHHHHHHHHHHC---CSE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCe
Confidence 5779999999999999998999999999988 766
No 142
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=24.72 E-value=1.2e+02 Score=21.46 Aligned_cols=27 Identities=30% Similarity=0.431 Sum_probs=16.1
Q ss_pred CEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 32 ERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 32 ~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
++||||||=-..-..+. +.|.+. |..+
T Consensus 1 ~~ILiVDDd~~~~~~l~---~~L~~~---g~~v 27 (368)
T 3dzd_A 1 KRVLVVDDEESITSSLS---AILEEE---GYHP 27 (368)
T ss_dssp CEEEEECSCHHHHHHHH---HHHHHT---TCEE
T ss_pred CEEEEEeCCHHHHHHHH---HHHHHc---CCEE
Confidence 47999999655444433 344455 6554
No 143
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=24.71 E-value=1e+02 Score=21.01 Aligned_cols=34 Identities=15% Similarity=0.297 Sum_probs=24.9
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERC 67 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~ 67 (78)
.+.+|++|||.= .|+.=..++++++.. |++++..
T Consensus 163 ~~~~g~~VlV~G----aG~vG~~a~qla~~~---Ga~Vi~~ 196 (340)
T 3s2e_A 163 DTRPGQWVVISG----IGGLGHVAVQYARAM---GLRVAAV 196 (340)
T ss_dssp TCCTTSEEEEEC----CSTTHHHHHHHHHHT---TCEEEEE
T ss_pred CCCCCCEEEEEC----CCHHHHHHHHHHHHC---CCeEEEE
Confidence 346899999852 365667788888888 9977654
No 144
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=24.54 E-value=1.3e+02 Score=20.75 Aligned_cols=31 Identities=29% Similarity=0.317 Sum_probs=25.5
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
.++++++|+ -+|++.++++-.|.+. |+..+.
T Consensus 123 ~~~~~~lil----GaGGaarai~~aL~~~---g~~~i~ 153 (269)
T 3tum_A 123 PAGKRALVI----GCGGVGSAIAYALAEA---GIASIT 153 (269)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHHT---TCSEEE
T ss_pred cccCeEEEE----ecHHHHHHHHHHHHHh---CCCeEE
Confidence 468899864 7999999999999999 876543
No 145
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=24.24 E-value=1.5e+02 Score=20.30 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=23.7
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
+.+|++|||.= .|+.=..++++++.. |++++.
T Consensus 166 ~~~g~~VlV~G----aG~vG~~a~qla~~~---Ga~Vi~ 197 (352)
T 1e3j_A 166 VQLGTTVLVIG----AGPIGLVSVLAAKAY---GAFVVC 197 (352)
T ss_dssp CCTTCEEEEEC----CSHHHHHHHHHHHHT---TCEEEE
T ss_pred CCCCCEEEEEC----CCHHHHHHHHHHHHc---CCEEEE
Confidence 46889999962 366667788888888 998543
No 146
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=24.13 E-value=1.5e+02 Score=20.50 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=24.5
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCC-eEEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNF-HLER 66 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~-~~~~ 66 (78)
.+.+|++|||. ..|+.=..++++++.. |+ +++.
T Consensus 189 ~~~~g~~VlV~----GaG~vG~~a~qla~~~---Ga~~Vi~ 222 (374)
T 1cdo_A 189 KVEPGSTCAVF----GLGAVGLAAVMGCHSA---GAKRIIA 222 (374)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHT---TCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHc---CCCEEEE
Confidence 34678999996 2476667788899988 98 5554
No 147
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=23.88 E-value=1.2e+02 Score=17.86 Aligned_cols=30 Identities=10% Similarity=0.037 Sum_probs=24.0
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCe
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFH 63 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~ 63 (78)
+.+++.|++.++ +|.....+...|++. |.+
T Consensus 83 ~~~~~~ivvyC~---~G~rs~~a~~~L~~~---G~~ 112 (139)
T 2hhg_A 83 FQEDKKFVFYCA---GGLRSALAAKTAQDM---GLK 112 (139)
T ss_dssp GGSSSEEEEECS---SSHHHHHHHHHHHHH---TCC
T ss_pred CCCCCeEEEECC---CChHHHHHHHHHHHc---CCC
Confidence 457889999985 577777888999998 875
No 148
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=23.60 E-value=91 Score=18.99 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=21.5
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEE
Q 034952 30 AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERC 67 (78)
Q Consensus 30 ~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~ 67 (78)
.+.+||||||=-.....+... |.+. |..+..+
T Consensus 11 ~~~~iLivdd~~~~~~~l~~~---L~~~---g~~v~~~ 42 (196)
T 1qo0_D 11 RELQVLVLNPPGEVSDALVLQ---LIRI---GCSVRQC 42 (196)
T ss_dssp GGCEEEEESCTTHHHHHHHHH---HHHH---TCEEEEE
T ss_pred cCCeEEEEcCChhHHHHHHHH---HHHc---CCeEEEe
Confidence 456999999977666555544 4456 7766543
No 149
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=23.59 E-value=1.5e+02 Score=20.39 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=24.5
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCC-eEEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNF-HLER 66 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~-~~~~ 66 (78)
.+.+|++|||. ..|+.=..++++++.. |+ +++.
T Consensus 187 ~~~~g~~VlV~----GaG~vG~~avqla~~~---Ga~~Vi~ 220 (373)
T 2fzw_A 187 KLEPGSVCAVF----GLGGVGLAVIMGCKVA---GASRIIG 220 (373)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHH---TCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHc---CCCeEEE
Confidence 34678999996 3477667788999989 98 5544
No 150
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=23.53 E-value=96 Score=16.71 Aligned_cols=17 Identities=35% Similarity=0.313 Sum_probs=10.7
Q ss_pred EEEEEeccccchHHHHH
Q 034952 33 RALIVDDLVATGGTLFA 49 (78)
Q Consensus 33 ~vlIVDDvitTG~Ti~~ 49 (78)
+|+|+||=-.....+..
T Consensus 3 ~ilivdd~~~~~~~l~~ 19 (116)
T 3a10_A 3 RILVVDDEPNIRELLKE 19 (116)
T ss_dssp EEEEECSCHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHH
Confidence 78888886555444443
No 151
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=23.48 E-value=1.7e+02 Score=20.25 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=24.9
Q ss_pred cC-CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEE
Q 034952 28 VQ-AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERC 67 (78)
Q Consensus 28 ~~-~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~ 67 (78)
+. +|++|||. ..|+.=..++++++.. |++++..
T Consensus 184 ~~~~g~~VlV~----GaG~vG~~~~q~a~~~---Ga~Vi~~ 217 (366)
T 1yqd_A 184 LDEPGKHIGIV----GLGGLGHVAVKFAKAF---GSKVTVI 217 (366)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHT---TCEEEEE
T ss_pred cCCCCCEEEEE----CCCHHHHHHHHHHHHC---CCEEEEE
Confidence 44 88999997 2477777888999988 9876543
No 152
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=23.39 E-value=1.7e+02 Score=20.14 Aligned_cols=32 Identities=19% Similarity=0.366 Sum_probs=24.6
Q ss_pred cC-CCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 28 VQ-AGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 28 ~~-~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
+. +|++|+|+ ..|+.=..++++++.. |++++.
T Consensus 177 ~~~~g~~VlV~----GaG~vG~~a~qlak~~---Ga~Vi~ 209 (357)
T 2cf5_A 177 LKQPGLRGGIL----GLGGVGHMGVKIAKAM---GHHVTV 209 (357)
T ss_dssp TTSTTCEEEEE----CCSHHHHHHHHHHHHH---TCEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHC---CCeEEE
Confidence 44 89999997 2477777888999999 987554
No 153
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=23.35 E-value=1.6e+02 Score=20.38 Aligned_cols=33 Identities=15% Similarity=0.136 Sum_probs=24.4
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCC-eEEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNF-HLER 66 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~-~~~~ 66 (78)
.+.+|++|||. ..|+.=..++++++.. |+ +++.
T Consensus 188 ~~~~g~~VlV~----GaG~vG~~a~qla~~~---Ga~~Vi~ 221 (374)
T 2jhf_A 188 KVTQGSTCAVF----GLGGVGLSVIMGCKAA---GAARIIG 221 (374)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHT---TCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHc---CCCeEEE
Confidence 34578999997 2466667788889988 98 5544
No 154
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=23.35 E-value=1.2e+02 Score=23.89 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=22.8
Q ss_pred EEEEEeccc-cc----hHHHHHHHHHHhchhcCCCeEEEE
Q 034952 33 RALIVDDLV-AT----GGTLFAAIRLLGRFVSFNFHLERC 67 (78)
Q Consensus 33 ~vlIVDDvi-tT----G~Ti~~~~~~l~~~~~~g~~~~~~ 67 (78)
+||||||=. .. |.-+......|++. |.++..+
T Consensus 2 ~ILiVdDd~~~~~~~~~~~~~~L~~~L~~~---g~~v~~a 38 (755)
T 2vyc_A 2 KVLIVESEFLHQDTWVGNAVERLADALSQQ---NVTVIKS 38 (755)
T ss_dssp EEEEECCTTSTTSHHHHHHHHHHHHHHHHT---TCEEEEE
T ss_pred eEEEEeCCccccccccHHHHHHHHHHHHhC---CCEEEEE
Confidence 799999986 44 45566667777778 8777643
No 155
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=23.19 E-value=1.6e+02 Score=20.23 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=24.2
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCC-eEEEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNF-HLERC 67 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~-~~~~~ 67 (78)
+.+|++|||+ ..|+.=..++++++.. |+ +++.+
T Consensus 169 ~~~g~~VlV~----GaG~vG~~aiqlak~~---Ga~~Vi~~ 202 (356)
T 1pl8_A 169 VTLGHKVLVC----GAGPIGMVTLLVAKAM---GAAQVVVT 202 (356)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHT---TCSEEEEE
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHc---CCCEEEEE
Confidence 4678999986 2466667788888888 98 55543
No 156
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=22.94 E-value=1.2e+02 Score=17.70 Aligned_cols=31 Identities=26% Similarity=0.285 Sum_probs=23.4
Q ss_pred ccCCCCEEEEEeccccchHH--HHHHHHHHhchhcCCCe
Q 034952 27 AVQAGERALIVDDLVATGGT--LFAAIRLLGRFVSFNFH 63 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~T--i~~~~~~l~~~~~~g~~ 63 (78)
.+.+++.|++... +|.. ...+...|++. |.+
T Consensus 67 ~l~~~~~ivvyC~---~g~r~~s~~a~~~L~~~---G~~ 99 (124)
T 3flh_A 67 ELDPAKTYVVYDW---TGGTTLGKTALLVLLSA---GFE 99 (124)
T ss_dssp GSCTTSEEEEECS---SSSCSHHHHHHHHHHHH---TCE
T ss_pred cCCCCCeEEEEeC---CCCchHHHHHHHHHHHc---CCe
Confidence 3457888999875 5655 56788889999 885
No 157
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=22.88 E-value=1e+02 Score=16.76 Aligned_cols=34 Identities=15% Similarity=0.058 Sum_probs=29.2
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
+.+|+.|+=||+.-.++.+...+.+++++. +..+
T Consensus 45 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~~ 78 (91)
T 1g9o_A 45 LLAGDRLVEVNGENVEKETHQQVVSRIRAA---LNAV 78 (91)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHTC---SSEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCcE
Confidence 678999999999999988888899999887 6554
No 158
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=22.75 E-value=1.6e+02 Score=20.30 Aligned_cols=33 Identities=15% Similarity=0.057 Sum_probs=24.6
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCC-eEEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNF-HLER 66 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~-~~~~ 66 (78)
.+.+|++|||. ..|+.=..++++++.. |+ +++.
T Consensus 192 ~~~~g~~VlV~----GaG~vG~~aiqlak~~---Ga~~Vi~ 225 (376)
T 1e3i_A 192 KVTPGSTCAVF----GLGCVGLSAIIGCKIA---GASRIIA 225 (376)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHT---TCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHc---CCCeEEE
Confidence 34578999986 3477667788999988 98 5544
No 159
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=22.67 E-value=56 Score=18.91 Aligned_cols=26 Identities=19% Similarity=0.114 Sum_probs=16.2
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhch
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRF 57 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~ 57 (78)
.++.+||||||=-..... ..+.|.+.
T Consensus 13 ~~~~~iLivdd~~~~~~~---l~~~L~~~ 38 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFREG---VVRALSLS 38 (152)
T ss_dssp -CCEEEEEECSSHHHHHH---HHHHHHHH
T ss_pred CceEEEEEEcCCHHHHHH---HHHHHhhC
Confidence 467899999995544433 44455555
No 160
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=22.63 E-value=1.1e+02 Score=17.25 Aligned_cols=35 Identities=14% Similarity=0.213 Sum_probs=30.8
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
.+.+|+.|+=|++.-.++.+...+.+++++. +..+
T Consensus 53 gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~---~~~v 87 (103)
T 2dc2_A 53 GLHVGDAILAVNGVNLRDTKHKEAVTILSQQ---RGEI 87 (103)
T ss_dssp CCCSSEEEEEETTEESTTSCHHHHHHHHHHC---CSEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCcE
Confidence 5788999999999999998999999999988 7644
No 161
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=22.62 E-value=1.6e+02 Score=20.44 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=24.2
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCC-eEEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNF-HLER 66 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~-~~~~ 66 (78)
+.+|++|||. ..|+.=..++++++.. |+ +++.
T Consensus 180 ~~~g~~VlV~----GaG~vG~~aiqlak~~---Ga~~Vi~ 212 (370)
T 4ej6_A 180 IKAGSTVAIL----GGGVIGLLTVQLARLA---GATTVIL 212 (370)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHT---TCSEEEE
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHc---CCCEEEE
Confidence 4679999986 2377777888999988 98 5543
No 162
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=22.59 E-value=1e+02 Score=16.76 Aligned_cols=27 Identities=26% Similarity=0.378 Sum_probs=15.4
Q ss_pred CEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 32 ERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 32 ~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
.+|+||||=-.....+ .+.|.+. |..+
T Consensus 4 ~~ilivdd~~~~~~~l---~~~l~~~---~~~v 30 (123)
T 1xhf_A 4 PHILIVEDELVTRNTL---KSIFEAE---GYDV 30 (123)
T ss_dssp CEEEEECSCHHHHHHH---HHHHHTT---TCEE
T ss_pred ceEEEEeCCHHHHHHH---HHHHhhC---CcEE
Confidence 4788888865444333 3444455 5554
No 163
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=22.57 E-value=1.2e+02 Score=17.66 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=29.7
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
+.+|+.|+=|++.-.++.|...+.+++++. |-.+
T Consensus 73 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---g~~v 106 (117)
T 2byg_A 73 LQVGDRLLMVNNYSLEEVTHEEAVAILKNT---SEVV 106 (117)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeE
Confidence 788999999999999998999999999887 6543
No 164
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=22.12 E-value=1.7e+02 Score=20.20 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=24.0
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCC-eEEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNF-HLER 66 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~-~~~~ 66 (78)
+.+|++|||+ ..|+.=..++++++.. |+ +++.
T Consensus 189 ~~~g~~VlV~----GaG~vG~~aiqlak~~---Ga~~Vi~ 221 (373)
T 1p0f_A 189 VTPGSTCAVF----GLGGVGFSAIVGCKAA---GASRIIG 221 (373)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHH---TCSEEEE
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHc---CCCeEEE
Confidence 4578999997 3476667788888888 98 5544
No 165
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=22.01 E-value=74 Score=18.70 Aligned_cols=31 Identities=23% Similarity=0.254 Sum_probs=26.8
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhch
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRF 57 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~ 57 (78)
.+.+|.+|+=||..-.++.+...+.++|++.
T Consensus 61 gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (118)
T 1v6b_A 61 GVVKGDEIMAINGKIVTDYTLAEAEAALQKA 91 (118)
T ss_dssp SSCTTCEEEEESSCBCTTCBHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 5789999999999999998888888888764
No 166
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=21.98 E-value=1.7e+02 Score=20.16 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=24.0
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCe-EEE
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFH-LER 66 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~-~~~ 66 (78)
.+.+|++|||+ ..|+.=..++++++.. |++ ++.
T Consensus 187 ~~~~g~~VlV~----GaG~vG~~a~qlak~~---Ga~~Vi~ 220 (371)
T 1f8f_A 187 KVTPASSFVTW----GAGAVGLSALLAAKVC---GASIIIA 220 (371)
T ss_dssp CCCTTCEEEEE----SCSHHHHHHHHHHHHH---TCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHc---CCCeEEE
Confidence 34678999998 3466666788888888 984 544
No 167
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=21.78 E-value=1.1e+02 Score=16.59 Aligned_cols=15 Identities=33% Similarity=0.414 Sum_probs=8.9
Q ss_pred EEEEEeccccchHHH
Q 034952 33 RALIVDDLVATGGTL 47 (78)
Q Consensus 33 ~vlIVDDvitTG~Ti 47 (78)
+|+||||=-.....+
T Consensus 2 ~ilivdd~~~~~~~l 16 (121)
T 2pl1_A 2 RVLVVEDNALLRHHL 16 (121)
T ss_dssp EEEEECSCHHHHHHH
T ss_pred eEEEEeCcHHHHHHH
Confidence 578888755444333
No 168
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=21.67 E-value=1.7e+02 Score=19.73 Aligned_cols=33 Identities=12% Similarity=0.072 Sum_probs=25.2
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERC 67 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~ 67 (78)
..+|++|+|. -.|+.-..++++++.. |++++.+
T Consensus 158 ~~~g~~VlV~----GaG~vG~~aiq~ak~~---G~~~vi~ 190 (346)
T 4a2c_A 158 GCENKNVIII----GAGTIGLLAIQCAVAL---GAKSVTA 190 (346)
T ss_dssp CCTTSEEEEE----CCSHHHHHHHHHHHHT---TCSEEEE
T ss_pred cCCCCEEEEE----CCCCcchHHHHHHHHc---CCcEEEE
Confidence 4689999986 3467777788999999 9876543
No 169
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=21.56 E-value=1.1e+02 Score=16.51 Aligned_cols=36 Identities=14% Similarity=0.189 Sum_probs=30.4
Q ss_pred cccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 26 CAVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 26 ~~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
..+.+|+.++=|++.-.++.+...+.+++++. +..+
T Consensus 45 agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v 80 (87)
T 4e34_A 45 GGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ---RGEI 80 (87)
T ss_dssp SCCCTTEEEEEETTEECTTCCHHHHHHHHHHC---CSEE
T ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeE
Confidence 35788999999999988888999999999887 6653
No 170
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=21.52 E-value=50 Score=22.10 Aligned_cols=19 Identities=32% Similarity=0.543 Sum_probs=16.7
Q ss_pred EEEeccccchHHHHHHHHH
Q 034952 35 LIVDDLVATGGTLFAAIRL 53 (78)
Q Consensus 35 lIVDDvitTG~Ti~~~~~~ 53 (78)
+|+|...-||.|..+|.++
T Consensus 215 ~vlD~f~GsGtt~~~a~~~ 233 (260)
T 1g60_A 215 LVLDCFMGSGTTAIVAKKL 233 (260)
T ss_dssp EEEESSCTTCHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHc
Confidence 7889999999999988764
No 171
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=21.38 E-value=1.2e+02 Score=17.04 Aligned_cols=30 Identities=20% Similarity=0.231 Sum_probs=27.3
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhc
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGR 56 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~ 56 (78)
.+.+|+.|+=|++.-.+|.+...+.++|++
T Consensus 55 gl~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 84 (101)
T 2yt7_A 55 ALSIGDRLTAINGTSLVGLPLAACQAAVRE 84 (101)
T ss_dssp SCCTTCEEEEESSCBCTTSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 367899999999999999999999999987
No 172
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=21.32 E-value=1.3e+02 Score=19.36 Aligned_cols=30 Identities=13% Similarity=0.205 Sum_probs=21.1
Q ss_pred EEEE-eccccchHHHHHHHHHHhchhcCCCeEEE
Q 034952 34 ALIV-DDLVATGGTLFAAIRLLGRFVSFNFHLER 66 (78)
Q Consensus 34 vlIV-DDvitTG~Ti~~~~~~l~~~~~~g~~~~~ 66 (78)
|+++ ||.-.+...+..+++.+++. |.++.-
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~---gi~v~~ 140 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKN---NVAIDI 140 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHT---TEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHC---CCEEEE
Confidence 5566 55534567788899999998 776553
No 173
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=21.31 E-value=1.2e+02 Score=17.67 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=29.6
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHL 64 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~ 64 (78)
+.+|+.|+=||+.-..+.|...+.++|++. |-.+
T Consensus 61 l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~---g~~v 94 (117)
T 1v62_A 61 LHPGDHILSIDGTSMEHCSLLEATKLLASI---SEKV 94 (117)
T ss_dssp CCTTCBEEEETTEETTSCCHHHHHHHHHSC---SSEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeE
Confidence 788999999999999999999999999876 6543
No 174
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=20.75 E-value=1e+02 Score=16.72 Aligned_cols=34 Identities=21% Similarity=0.157 Sum_probs=29.5
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCe
Q 034952 27 AVQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFH 63 (78)
Q Consensus 27 ~~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~ 63 (78)
.+.+|+.|+=|++.-.++.+...+.+.+++. |-.
T Consensus 48 gl~~GD~I~~ing~~v~~~~~~~~~~~~~~~---~~~ 81 (90)
T 1qav_A 48 ALFVGDAILSVNGEDLSSATHDEAVQALKKT---GKE 81 (90)
T ss_dssp CCCTTEEEEEETTEECTTCCHHHHHHHHHTC---CSE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCe
Confidence 5789999999999999888888999999887 654
No 175
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=20.62 E-value=2e+02 Score=19.92 Aligned_cols=33 Identities=15% Similarity=0.146 Sum_probs=27.5
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEEEEE
Q 034952 29 QAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLERCQ 68 (78)
Q Consensus 29 ~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~~~~ 68 (78)
.+|++|||| -.|......++.|.+. |+++.-+.
T Consensus 11 l~~k~VLVV----GgG~va~rka~~Ll~~---Ga~VtVia 43 (274)
T 1kyq_A 11 LKDKRILLI----GGGEVGLTRLYKLMPT---GCKLTLVS 43 (274)
T ss_dssp CTTCEEEEE----EESHHHHHHHHHHGGG---TCEEEEEE
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHhC---CCEEEEEc
Confidence 478999986 6899999999999999 99876544
No 176
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=20.44 E-value=49 Score=19.20 Aligned_cols=14 Identities=43% Similarity=0.501 Sum_probs=10.0
Q ss_pred CCCEEEEEeccccc
Q 034952 30 AGERALIVDDLVAT 43 (78)
Q Consensus 30 ~g~~vlIVDDvitT 43 (78)
...+||||||=-..
T Consensus 3 ~~~~ILivdd~~~~ 16 (151)
T 3kcn_A 3 LNERILLVDDDYSL 16 (151)
T ss_dssp CCCEEEEECSCHHH
T ss_pred CCCeEEEEeCCHHH
Confidence 35689999995443
No 177
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=20.37 E-value=1.5e+02 Score=17.76 Aligned_cols=35 Identities=9% Similarity=0.023 Sum_probs=30.0
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHhchhcCCCeEE
Q 034952 28 VQAGERALIVDDLVATGGTLFAAIRLLGRFVSFNFHLE 65 (78)
Q Consensus 28 ~~~g~~vlIVDDvitTG~Ti~~~~~~l~~~~~~g~~~~ 65 (78)
+.+|++|+=|+..-.++.+...+.+++++. |-.+.
T Consensus 83 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---g~~v~ 117 (132)
T 3l4f_D 83 LRMGDFLIEVNGQNVVKVGHRQVVNMIRQG---GNTLM 117 (132)
T ss_dssp CCTTCEEEEESSSBCTTSCHHHHHHHHHHT---TTEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEE
Confidence 678999999999999988889999999887 76543
Done!