BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034955
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9TT99|ATOX1_CANFA Copper transport protein ATOX1 OS=Canis familiaris GN=ATOX1 PE=3
SV=1
Length = 68
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFW 57
M+CEGC AV RVL K+ GVE FDIDL +KV + D +L+T+ KTGK ++
Sbjct: 10 MTCEGCSNAVSRVLNKLGGVE-FDIDLPNKKVCINSEHSVDILLETLEKTGKAVSYL 65
>sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1
Length = 68
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFW 57
M+CEGC AV RVL K+ GV+ FDIDL +KV + D +L+T+ KTGK ++
Sbjct: 10 MTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSYL 65
>sp|Q3T0E0|ATOX1_BOVIN Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1
Length = 68
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFW 57
M+CEGC AV RVL K+ GV+ FDIDL +KV + D +L+T+ KTGK ++
Sbjct: 10 MTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSYL 65
>sp|O08997|ATOX1_MOUSE Copper transport protein ATOX1 OS=Mus musculus GN=Atox1 PE=2 SV=1
Length = 68
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFW 57
M+CEGC AV RVL K+ GVE F+IDL +KV + D +L T++KTGK ++
Sbjct: 10 MTCEGCAEAVSRVLNKLGGVE-FNIDLPNKKVCIDSEHSSDTLLATLNKTGKAVSYL 65
>sp|Q9WUC4|ATOX1_RAT Copper transport protein ATOX1 OS=Rattus norvegicus GN=Atox1 PE=1
SV=1
Length = 68
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFW 57
M+C GC AV RVL K+ GVE F+IDL +KV ++ D +L T++KTGK ++
Sbjct: 10 MTCGGCAEAVSRVLNKLGGVE-FNIDLPNKKVCIESEHSSDILLATLNKTGKAVSYL 65
>sp|O00244|ATOX1_HUMAN Copper transport protein ATOX1 OS=Homo sapiens GN=ATOX1 PE=1 SV=1
Length = 68
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEEE 60
M+C GC AV RVL K+ GV+ +DIDL +KV ++ D +L T+ KTGK ++ E
Sbjct: 10 MTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68
>sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=CCS1 PE=3 SV=2
Length = 250
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGK 52
M C+ CV +V L ++G+ +DIDLK VT +G+V P +++ + TGK
Sbjct: 13 MECQSCVDSVSSSLKSLNGISKYDIDLKSNLVTTEGSVPPSEIVKAIQSTGK 64
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVS-KTGKKTAFW 57
M CEGC V+R + M GV + ++ K KVTV G V P+ V+ +S +TGKK W
Sbjct: 34 MDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVELW 91
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium
discoideum GN=atox1 PE=3 SV=2
Length = 67
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN-VQPDAVLQTVSKTGKKTAF 56
M+C GC AV +L K+DGV IDL+ +KV+ + + + D +L+ + KTGKK +
Sbjct: 9 MTCGGCSKAVNAILSKIDGVSNIQIDLENKKVSCESSKMGADELLKNIQKTGKKCSI 65
>sp|P40202|CCS1_YEAST Superoxide dismutase 1 copper chaperone OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CCS1 PE=1
SV=1
Length = 249
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGK 52
M CE CV +K L + G+ + + D+++Q ++V+ +V P ++ T+ GK
Sbjct: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGK 66
>sp|P38636|ATX1_YEAST Metal homeostasis factor ATX1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ATX1 PE=1 SV=1
Length = 73
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 1 MSCEGCVGAVKRVLGKMD-GVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGK 52
M+C GC GAV +VL K++ V DI L++Q V V + D +L+ + KTGK
Sbjct: 13 MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGK 65
>sp|Q6BZU2|CCS1_YARLI Superoxide dismutase 1 copper chaperone OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=CCS1 PE=3 SV=1
Length = 234
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGK 52
+ CE C +VK+ L + G+E+ D L +Q ++V G P +++ V GK
Sbjct: 11 LECESCCDSVKQALANVQGIESVDCKLVDQLISVTGTSAPSQIVKAVQNIGK 62
>sp|O74735|ATX1_SCHPO Metal homeostasis factor atx1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=atx1 PE=3 SV=1
Length = 68
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGK 52
M+C+GC A+ RVL ++ GVE I +++Q+V V + + V QT+ KTGK
Sbjct: 9 MACDGCKNAIDRVLTRL-GVEDKSISVEKQEVIVTTDKPYELVEQTIKKTGK 59
>sp|Q75DD6|CCS1_ASHGO Superoxide dismutase 1 copper chaperone OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=CCS1 PE=3 SV=1
Length = 238
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEEE 60
M C C G + R L + GV+ DL+ Q V V+G P +++Q ++ TG+
Sbjct: 16 MHCGDCTGEISRALRAVPGVQEVTPDLERQLVAVRGIAPPSSIVQALAATGRDAILRGSG 75
Query: 61 KPAPA 65
+P A
Sbjct: 76 EPDSA 80
>sp|Q8ZCA7|COPA_YERPE Copper-exporting P-type ATPase A OS=Yersinia pestis GN=copA PE=3
SV=1
Length = 961
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEEE 60
MSC CV V+ L ++DGV+ ++L E+ V G +A++ V G E+E
Sbjct: 235 MSCASCVSKVQNALQRVDGVQVARVNLAERSALVTGTQNNEALIAAVKNAGYGAEIIEDE 294
>sp|Q8ZR95|COPA_SALTY Copper-exporting P-type ATPase A OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=copA PE=1 SV=3
Length = 833
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEEE 60
+SC CV VK L + VE D+ + E VT G DA+++T+ + G A
Sbjct: 12 LSCGHCVKRVKESLEQRPDVELADVTVTEAHVT--GTASADALIETIKQAGYG-ATLSHP 68
Query: 61 KPAPAESDSKPTEAVAA 77
K P S P+EA+AA
Sbjct: 69 KAKPLTESSIPSEALAA 85
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTG 51
MSC CV V+ L + GV ++L E+ V G+ ++Q V K G
Sbjct: 107 MSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEKAG 157
>sp|Q8Z8S4|COPA_SALTI Copper-exporting P-type ATPase A OS=Salmonella typhi GN=copA PE=3
SV=3
Length = 833
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEEE 60
+SC CV VK L + VE D+ + E VT G DA+++T+ + G A
Sbjct: 12 LSCGHCVKRVKESLEQRPDVELADVTVTEAHVT--GTASADALIETIKQAGYG-ATLSHP 68
Query: 61 KPAPAESDSKPTEAVAA 77
K P S P+EA+AA
Sbjct: 69 KAKPLTESSIPSEALAA 85
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTG 51
MSC CV V+ L + GV ++L E+ V G+ ++Q V K G
Sbjct: 107 MSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEKAG 157
>sp|Q6CIG2|CCS1_KLULA Superoxide dismutase 1 copper chaperone OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CCS1 PE=3 SV=1
Length = 245
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEEE 60
M CE C +++ L ++G++ D+K+ + V+G+ P A++ + G+
Sbjct: 17 MHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINALKNCGRDGIIRGTG 76
Query: 61 KPAPA 65
KP A
Sbjct: 77 KPNSA 81
>sp|Q9WU84|CCS_MOUSE Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs
PE=1 SV=1
Length = 274
Score = 37.7 bits (86), Expect = 0.024, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAF 56
MSC+ CV AV + L + GV+ D+ L+ Q V V+ + V + TG++
Sbjct: 20 MSCQSCVDAVHKTLKGVAGVQNVDVQLENQMVLVQTTLPSQEVQALLESTGRQAVL 75
>sp|Q8CN01|COPZ_STAES Copper chaperone CopZ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=copZ PE=3 SV=1
Length = 68
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN 37
MSCE C AV+ L K++GV + +++L E V V+ N
Sbjct: 11 MSCEHCRNAVESALAKLNGVSSAEVNLDENHVRVEYN 47
>sp|Q5HL55|COPZ_STAEQ Copper chaperone CopZ OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=copZ PE=3 SV=1
Length = 68
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN 37
MSCE C AV+ L K++GV + +++L E V V+ N
Sbjct: 11 MSCEHCRNAVESALAKLNGVSSAEVNLDENHVRVEYN 47
>sp|Q59385|COPA_ECOLI Copper-exporting P-type ATPase A OS=Escherichia coli (strain K12)
GN=copA PE=1 SV=4
Length = 834
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTG 51
MSC CV V+ L + GV ++L E+ V G+ P ++Q V K G
Sbjct: 108 MSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAG 158
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEEE 60
+SC CV VK L + VE D+ + E VT G + +++T+ + G +
Sbjct: 12 LSCGHCVKRVKESLEQRPDVEQADVSITEAHVT--GTASAEQLIETIKQAGYDASV-SHP 68
Query: 61 KPAPAESDSKPTEAVAA 77
K P S P+EA+ A
Sbjct: 69 KAKPLAESSIPSEALTA 85
>sp|Q8XD24|COPA_ECO57 Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7
GN=copA PE=3 SV=3
Length = 834
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTG 51
MSC CV V+ L + GV ++L E+ V G+ P ++Q V K G
Sbjct: 108 MSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAG 158
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEEE 60
+SC CV VK L + VE D+ + E VT G + +++T+ + G +
Sbjct: 12 LSCGHCVKRVKESLEQRPDVEQADVSITEAHVT--GTASAEQLIETIKQAGYDASV-SHP 68
Query: 61 KPAPAESDSKPTEAVAA 77
K P S P+EA+ A
Sbjct: 69 KAKPLAESSIPSEALTA 85
>sp|Q6PWT7|CCS_PIG Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS
PE=2 SV=1
Length = 274
Score = 35.8 bits (81), Expect = 0.072, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAF 56
M+C+ CV AV R L + G+++ ++ L+ Q V V+ + V + TG++
Sbjct: 20 MTCQSCVDAVSRSLQGVAGIQSVEVQLENQMVLVQTTLPSQVVQALLEDTGRQAVL 75
>sp|Q9KPZ7|COPA_VIBCH Copper-exporting P-type ATPase A OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=copA PE=3
SV=1
Length = 915
Score = 35.8 bits (81), Expect = 0.073, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKG-NVQPDAVLQTVSKTG 51
M+C CV +V++ L ++GV++ ++L EQ V+G P +L + +G
Sbjct: 181 MTCASCVASVEKALLSVEGVQSAQVNLTEQSALVRGIFANPQPLLNAIQSSG 232
>sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium meliloti (strain 1021)
GN=actP2 PE=3 SV=1
Length = 827
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPD--AVLQTVSKTGKKTAFWE 58
M+C CV V++ + + GV + +++L ++ TV+ + +PD AVL + K G
Sbjct: 24 MTCASCVRRVEKAITAVPGVASANVNLATERATVQFDGEPDTLAVLHAIEKAGYAPRIAT 83
Query: 59 EE 60
EE
Sbjct: 84 EE 85
>sp|Q9X5X3|ATCU_SINMW Copper-transporting P-type ATPase OS=Sinorhizobium medicae
(strain WSM419) GN=actP PE=1 SV=1
Length = 827
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPD--AVLQTVSKTGKKTAFWE 58
M+C CV V++ + + GV + +++L ++ TV+ N P+ +VL+ V K G
Sbjct: 24 MTCASCVRRVEKAIAAVPGVASANVNLATERATVQFNGVPETTSVLRAVEKAGYAPRIVT 83
Query: 59 EE 60
EE
Sbjct: 84 EE 85
>sp|O14618|CCS_HUMAN Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS
PE=1 SV=1
Length = 274
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAF 56
M+C+ CV AV++ L + GV+ ++ L++Q V V + V + TG++
Sbjct: 20 MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVL 75
>sp|Q4A0G1|COPA_STAS1 Copper-exporting P-type ATPase A OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=copA PE=3 SV=1
Length = 794
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN---VQPDAVLQTVSKTG 51
M+C C +++VL + DGV+ ++L + T+ N DA+++ + K G
Sbjct: 81 MTCAACSNRIEKVLNRTDGVDQATVNLTTENATISYNPSATSVDALIKKIQKIG 134
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGN---VQPDAVLQTVSKTG 51
M+C C +++ L K+D VE ++++ +K T+ N D + +T+ KTG
Sbjct: 14 MTCAACANRIEKNLNKLDDVEA-NVNVTTEKATISYNPESTSADDLTKTIEKTG 66
>sp|Q4L971|COPZ_STAHJ Copper chaperone CopZ OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=copZ PE=3 SV=2
Length = 68
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTV 34
MSC+ C AV+ L K++GV + ++DL + +V V
Sbjct: 11 MSCDHCRNAVESALAKLNGVTSAEVDLDKNQVRV 44
>sp|Q9JK72|CCS_RAT Copper chaperone for superoxide dismutase OS=Rattus norvegicus
GN=Ccs PE=1 SV=1
Length = 274
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAF 56
MSC+ CV AV + L GV+ ++ L+ Q V V+ + V + TG++
Sbjct: 20 MSCQSCVDAVHKTLKGAAGVQNVEVQLENQMVLVQTTLPSQEVQALLESTGRQAVL 75
>sp|O32221|COPZ_BACSU Copper chaperone CopZ OS=Bacillus subtilis (strain 168) GN=copZ
PE=1 SV=1
Length = 69
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTV 34
MSC+ CV AV+ +G++DGV ++L+ KV V
Sbjct: 11 MSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDV 44
>sp|O32620|COPP_HELFC COP-associated protein OS=Helicobacter felis (strain ATCC 49179 /
NCTC 12436 / CS1) GN=copP PE=4 SV=1
Length = 66
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
M+C+ CV +++ +G+++GV +DL +Q V V+
Sbjct: 10 MTCQHCVDKIEKFVGELEGVSYIGVDLDKQSVQVE 44
>sp|Q54F73|CCS_DICDI Probable copper chaperone for superoxide dismutase
OS=Dictyostelium discoideum GN=ccs PE=3 SV=1
Length = 316
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 1 MSCEGCVGAVKRVL-GKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGK 52
+SC+ CV ++ + L K++ + + D+ EQ++ ++G +L+T+ TG+
Sbjct: 16 ISCQSCVDSISKELREKLENTKLVEHDIPEQRIVLQGTDLTQDILETIKNTGR 68
>sp|Q79ZY4|COPZ_STAAW Copper chaperone CopZ OS=Staphylococcus aureus (strain MW2)
GN=copZ PE=3 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|A8Z3F9|COPZ_STAAT Copper chaperone CopZ OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=copZ PE=3 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q6G6B6|COPZ_STAAS Copper chaperone CopZ OS=Staphylococcus aureus (strain MSSA476)
GN=copZ PE=3 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q7A3E5|COPZ_STAAN Copper chaperone CopZ OS=Staphylococcus aureus (strain N315)
GN=copZ PE=1 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q99R79|COPZ_STAAM Copper chaperone CopZ OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=copZ PE=3 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|A6QK48|COPZ_STAAE Copper chaperone CopZ OS=Staphylococcus aureus (strain Newman)
GN=copZ PE=3 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q5HCZ2|COPZ_STAAC Copper chaperone CopZ OS=Staphylococcus aureus (strain COL)
GN=copZ PE=3 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|A5IVY4|COPZ_STAA9 Copper chaperone CopZ OS=Staphylococcus aureus (strain JH9)
GN=copZ PE=3 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q2FV63|COPZ_STAA8 Copper chaperone CopZ OS=Staphylococcus aureus (strain NCTC 8325)
GN=copZ PE=1 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q2FDU9|COPZ_STAA3 Copper chaperone CopZ OS=Staphylococcus aureus (strain USA300)
GN=copZ PE=3 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|A6U4T9|COPZ_STAA2 Copper chaperone CopZ OS=Staphylococcus aureus (strain JH1)
GN=copZ PE=3 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|A7X6S3|COPZ_STAA1 Copper chaperone CopZ OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=copZ PE=3 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVK 35
MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 11 MSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3
Length = 1500
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTV 34
M+C CV +++ +GK++GV + L+E+ T+
Sbjct: 17 MTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATI 50
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTV 34
M+C C ++ +GK+ GV+ + L Q+ T+
Sbjct: 180 MTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATI 213
>sp|Q6L3Y2|R1B11_SOLDE Putative late blight resistance protein homolog R1B-11 OS=Solanum
demissum GN=R1B-11 PE=5 SV=1
Length = 1252
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 10 VKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKTGKK 53
+++ L + G+++ I+ E+K+TV G+V D V V K K+
Sbjct: 1206 IRKRLSSLPGIKSISINRGEKKLTVGGDVDADEVRLVVGKLNKR 1249
>sp|Q2YWA3|COPA_STAAB Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTV 34
M+C C +++VL KMDGV+ ++L ++ V
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|A8Z3F8|COPA_STAAT Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=copA PE=3 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 1 MSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTV 34
M+C C +++VL KMDGV+ ++L ++ V
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.125 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,755,295
Number of Sequences: 539616
Number of extensions: 954159
Number of successful extensions: 2909
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2754
Number of HSP's gapped (non-prelim): 170
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)