BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034961
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q50312|DNAJL_MYCPN DnaJ-like protein MG002 homolog OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=MPN_002 PE=4 SV=1
Length = 309
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 11 SLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD-FTEIHNAYETLSDPKARAVYD 69
+LY++L + TA + EIKT Y+ LAK YH D++ G D F +I+NAY LSD +A YD
Sbjct: 2 TLYDLLELPQTATLQEIKTAYKRLAKRYHPDINKQGADTFVKINNAYAVLSDTTQKAEYD 61
Query: 70 MSL 72
L
Sbjct: 62 AML 64
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 12 LYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD----FTEIHNAYETLSDPKARAV 67
LYE+L V+ A EIK YR LAK YH DL+ + F EI+ AYE LSDP+ RA
Sbjct: 6 LYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQ 65
Query: 68 YD 69
YD
Sbjct: 66 YD 67
>sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2
PE=2 SV=1
Length = 412
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 MAPGMGGSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD-FTEIHNAYETLSDP 62
MA LY++L V P A +E+K YR LAK YH D + N D F EI AYE LS+P
Sbjct: 1 MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNP 60
Query: 63 KARAVYD 69
+ R +YD
Sbjct: 61 EKRELYD 67
>sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1
SV=1
Length = 412
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 MAPGMGGSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD-FTEIHNAYETLSDP 62
MA LY++L V P A +E+K YR LAK YH D + N D F EI AYE LS+P
Sbjct: 1 MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNP 60
Query: 63 KARAVYD 69
+ R +YD
Sbjct: 61 EKRELYD 67
>sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1
SV=1
Length = 412
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 MAPGMGGSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD-FTEIHNAYETLSDP 62
MA LY++L V P A +E+K YR LAK YH D + N D F EI AYE LS+P
Sbjct: 1 MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNP 60
Query: 63 KARAVYD 69
+ R +YD
Sbjct: 61 EKRELYD 67
>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2
SV=1
Length = 412
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 MAPGMGGSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD-FTEIHNAYETLSDP 62
MA LY++L V P A +E+K YR LAK YH D + N D F EI AYE LS+P
Sbjct: 1 MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNP 60
Query: 63 KARAVYD 69
+ R +YD
Sbjct: 61 EKRELYD 67
>sp|Q71ZJ8|DNAJ_LISMF Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=dnaJ PE=3 SV=1
Length = 376
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWD--FTEIHNAYETLSDPKARAVYD 69
YEVL V +A EIK YR L+K YH D++ G D F EI AYE LSDP+ RA YD
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|C1KVB9|DNAJ_LISMC Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=dnaJ PE=3 SV=1
Length = 376
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWD--FTEIHNAYETLSDPKARAVYD 69
YEVL V +A EIK YR L+K YH D++ G D F EI AYE LSDP+ RA YD
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|O74752|MAS5_SCHPO Mitochondrial protein import protein mas5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mas5 PE=3 SV=1
Length = 407
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 12 LYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD-FTEIHNAYETLSDPKARAVYD 69
LYEVL V+ TA +E+K YR LA YH D + N D F EI AYE L+D + RA YD
Sbjct: 7 LYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYD 65
>sp|P0DJM1|DNAJ_LISMO Chaperone protein DnaJ OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=dnaJ PE=3 SV=1
Length = 377
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWD--FTEIHNAYETLSDPKARAVYD 69
YEVL + +A EIK YR L+K YH D++ G D F EI AYE LSDP+ RA YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|B8DE39|DNAJ_LISMH Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=dnaJ PE=3 SV=1
Length = 376
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWD--FTEIHNAYETLSDPKARAVYD 69
YEVL + +A EIK YR L+K YH D++ G D F EI AYE LSDP+ RA YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|G2K045|DNAJ_LISM4 Chaperone protein DnaJ OS=Listeria monocytogenes serotype 1/2a
(strain 10403S) GN=dnaJ PE=3 SV=1
Length = 377
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWD--FTEIHNAYETLSDPKARAVYD 69
YEVL + +A EIK YR L+K YH D++ G D F EI AYE LSDP+ RA YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|Q92BN9|DNAJ_LISIN Chaperone protein DnaJ OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=dnaJ PE=3 SV=1
Length = 376
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWD--FTEIHNAYETLSDPKARAVYD 69
YEVL + +A EIK YR L+K YH D++ G D F EI AYE LSDP+ RA YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|P47248|DNAJL_MYCGE DnaJ-like protein MG002 OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=MG002 PE=4 SV=1
Length = 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 11 SLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNG-WDFTEIHNAYETLSDPKARAVYD 69
+LY++L + TA I EIK Y+ LAK YH D++ G F EI+NAY LSDP + YD
Sbjct: 2 NLYDLLELPTTASIKEIKIAYKRLAKRYHPDVNKLGSQTFVEINNAYSILSDPNQKEKYD 61
Query: 70 MSL 72
L
Sbjct: 62 SML 64
>sp|Q9FYB5|DNJ11_ARATH Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana
GN=ATJ11 PE=1 SV=2
Length = 161
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 10 GSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDL-------SSNGWDFTEIHNAYETLSDP 62
SLY+VL V A +IK+ YR LA++ H D+ SS+ +F +IH AY TLSDP
Sbjct: 64 ASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDP 123
Query: 63 KARAVYDMSLVSTRR 77
+ R+VYD ++ R
Sbjct: 124 EKRSVYDRRMLRRSR 138
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1
SV=1
Length = 397
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWDFTEIHNAYETLSDPKARAVYD 69
Y++L V+P+A EIK YR LA YH D + + G F I AYE LSDPK R VYD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDVYD 65
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 8 MGGSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGW---DFTEIHNAYETLSDPKA 64
M YE+L V +A E+K YR LA+ YH D++ F EI+ AYE LSDP+A
Sbjct: 1 MARDFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQA 60
Query: 65 RAVYD 69
RA YD
Sbjct: 61 RANYD 65
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2
SV=1
Length = 397
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWDFTEIHNAYETLSDPKARAVYD 69
Y++L V+P+A EIK YR LA YH D + + G F I AYE LSDPK R +YD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYD 65
>sp|Q09912|PSI1_SCHPO Protein psi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=psi1 PE=2 SV=2
Length = 379
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 12 LYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGW-DFTEIHNAYETLSDPKARAVYD 69
LY+ L V P A +E+K YR LA YH D + NG F EI AYE LSDP+ R +YD
Sbjct: 7 LYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYD 65
>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=dnaJ PE=3 SV=1
Length = 386
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLS----SNGWDFTEIHNAYETLSDPKARAVY 68
YE+L V+ A +EIK YR LAK YH D++ + F EI+ AYE LSDP+ RA Y
Sbjct: 8 YEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKRARY 67
Query: 69 D 69
D
Sbjct: 68 D 68
>sp|B0S1F7|DNAJ_FINM2 Chaperone protein DnaJ OS=Finegoldia magna (strain ATCC 29328)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 11 SLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD----FTEIHNAYETLSDPKARA 66
+LYE+L V A EIK YR LAK YH D++S + F EI+ AYE L D + R
Sbjct: 3 NLYEILEVNENATQEEIKKSYRRLAKKYHPDINSGDSEAENKFKEINGAYEVLGDKEKRK 62
Query: 67 VYDM 70
YDM
Sbjct: 63 KYDM 66
>sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2
SV=1
Length = 396
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 11 SLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWDFTEIHNAYETLSDPKARAVYD 69
+ Y+VL V+P A E+K YR LA YH D + N G F +I AYE LSD K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1
SV=2
Length = 397
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 11 SLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWDFTEIHNAYETLSDPKARAVYD 69
+ Y+VL V+P A E+K YR LA YH D + N G F +I AYE LSD K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q5E954|DNJA1_BOVIN DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2
SV=2
Length = 397
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 11 SLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWDFTEIHNAYETLSDPKARAVYD 69
+ Y+VL V+P A E+K YR LA YH D + N G F +I AYE LSD K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q95JF4|DNAJ1_CHLAE DnaJ homolog subfamily A member 1 OS=Chlorocebus aethiops
GN=DNAJA1 PE=2 SV=1
Length = 397
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 11 SLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWDFTEIHNAYETLSDPKARAVYD 69
+ Y+VL V+P A E+K YR LA YH D + N G F +I AYE LSD K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1
Length = 381
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 8 MGGSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN----GWDFTEIHNAYETLSDPK 63
M YE+L V A EIK YR LA+ YH D++ + F EI+ AYE LSDP+
Sbjct: 1 MKRDYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPE 60
Query: 64 ARAVYD 69
RA YD
Sbjct: 61 KRARYD 66
>sp|B7JY68|DNAJ_CYAP8 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 8801)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 8 MGGSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGW---DFTEIHNAYETLSDPKA 64
M G YE L V+ A +IK YR LA+ YH D++ F EI+ AYE LS+P+
Sbjct: 1 MSGDYYETLGVDRNASKEDIKRAYRRLARKYHPDINKEAGAEDRFKEINRAYEVLSEPET 60
Query: 65 RAVYD 69
RA YD
Sbjct: 61 RARYD 65
>sp|Q5WHG0|DNAJ_BACSK Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN---GWDFTEIHNAYETLSDPKARAVYD 69
YEVL V+ A + E+K YR LA+ YH D++ F E+ AY+TLSDP+ +A YD
Sbjct: 7 YEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKARYD 66
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLS---SNGWDFTEIHNAYETLSDPKARAVYD 69
YE+L V A EIK YR L + YH DL+ S F EI+ AYE LSDP+ RA YD
Sbjct: 8 YEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQKRAQYD 67
>sp|Q6RSN5|DNAJ_RHIRD Chaperone protein DnaJ OS=Rhizobium radiobacter GN=dnaJ PE=1 SV=1
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 12 LYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD----FTEIHNAYETLSDPKARAV 67
YE L V TA E+K+ +R LA YH D + + D F EI+ AYETL DP+ RA
Sbjct: 6 FYETLGVSKTADEKELKSAFRKLAMKYHPDKNPDDADSERKFKEINEAYETLKDPQKRAA 65
Query: 68 YD 69
YD
Sbjct: 66 YD 67
>sp|P17631|DNAJ_BACSU Chaperone protein DnaJ OS=Bacillus subtilis (strain 168) GN=dnaJ
PE=2 SV=3
Length = 375
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWD--FTEIHNAYETLSDPKARAVYD 69
YEVL V +A EIK YR L+K YH D++ G D F E+ AYETLSD + RA YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYD 66
>sp|P63036|DNJA1_RAT DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1
PE=2 SV=1
Length = 397
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 11 SLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWDFTEIHNAYETLSDPKARAVYD 69
+ Y+VL V+P A E+K YR LA YH D + N G F +I AYE L+D K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYD 65
>sp|P63037|DNJA1_MOUSE DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1
SV=1
Length = 397
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 11 SLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWDFTEIHNAYETLSDPKARAVYD 69
+ Y+VL V+P A E+K YR LA YH D + N G F +I AYE L+D K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYD 65
>sp|B8CXL0|DNAJ_HALOH Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1
Length = 375
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD----FTEIHNAYETLSDPKARAVY 68
YE+L V A EIK YR LA+ YH D++ + D F EI AYE LSDP RA Y
Sbjct: 8 YEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDPDKRARY 67
Query: 69 D 69
D
Sbjct: 68 D 68
>sp|B7KEJ8|DNAJ_CYAP7 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 8 MGGSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWD--FTEIHNAYETLSDPKA 64
M G YE+L V A EIK YR LA+ YH D++ G + F EI+ AYE LS+P+
Sbjct: 1 MPGDYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPET 60
Query: 65 RAVYD 69
RA YD
Sbjct: 61 RARYD 65
>sp|Q87VN8|CBPA_PSESM Curved DNA-binding protein OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=cbpA PE=3 SV=1
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGW---DFTEIHNAYETLSDPKARAVYD 69
Y++L VEP A IKT YR LA+ YH D+S F E AYE LS P+ RA YD
Sbjct: 7 YKILDVEPAADDKAIKTAYRKLARKYHPDVSKEAGAEDKFKEASEAYEVLSSPEKRAEYD 66
>sp|A7GT07|DNAJ_BACCN Chaperone protein DnaJ OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=dnaJ PE=3 SV=1
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLS--SNGWD-FTEIHNAYETLSDPKARAVYD 69
YEVL V +A EIK YR LAK YH D+S N + F E+ AYE LSD + RA YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEENAVEKFKEVQEAYEVLSDEQKRAQYD 66
>sp|Q05646|DNAJ_ERYRH Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ
PE=2 SV=1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 12 LYEVLRVEPTAMISEIKTVYRSLAKVYHHDLS-SNGWD--FTEIHNAYETLSDPKARAVY 68
YE+L V +A +EIK YR LAK YH D++ +G + F E+ AYE LSD + RA Y
Sbjct: 7 FYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQKRANY 66
Query: 69 D 69
D
Sbjct: 67 D 67
>sp|A0AIS3|DNAJ_LISW6 Chaperone protein DnaJ OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1
Length = 376
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWD--FTEIHNAYETLSDPKARAVYD 69
YEVL + +A EIK YR L+K YH D++ G D F EI AYE LSD + RA YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYD 66
>sp|Q9PQ82|DNAJ_UREPA Chaperone protein DnaJ OS=Ureaplasma parvum serovar 3 (strain
ATCC 700970) GN=dnaJ PE=3 SV=1
Length = 375
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD--FTEIHNAYETLSDPKARAVYD 69
YE+L V +A EIK +R LAK +H D + + D F EI+ AYE LSD K RA YD
Sbjct: 7 YEILGVSKSATPEEIKAAFRKLAKEHHPDRNKSADDTLFKEINEAYEVLSDSKKRAQYD 65
>sp|Q67S53|DNAJ_SYMTH Chaperone protein DnaJ OS=Symbiobacterium thermophilum (strain T
/ IAM 14863) GN=dnaJ PE=3 SV=1
Length = 386
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD----FTEIHNAYETLSDPKARAVY 68
YE+L V A +EIK +R+LA+ YH D + + D F EI+ AY+ LSDP+ RA Y
Sbjct: 10 YEILGVPRNATEAEIKKAFRNLARKYHPDANKDDPDAAEKFKEINEAYQVLSDPEKRARY 69
Query: 69 D 69
D
Sbjct: 70 D 70
>sp|B1XQF6|DNAJ_SYNP2 Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1
Length = 378
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 8 MGGSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGW---DFTEIHNAYETLSDPKA 64
M G YE+L V E+K YR LA+ YH D++ + F EI+ AYE LS+P+
Sbjct: 1 MAGDFYEILGVSRDCGKDELKRAYRRLARQYHPDVNKDPGAEEKFKEINRAYEVLSEPET 60
Query: 65 RAVYD 69
RA YD
Sbjct: 61 RARYD 65
>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1
Length = 388
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD----FTEIHNAYETLSDPKARAVY 68
YE+L V A EIK YR LAK YH D + + F EI+ AYE LSDP+ R +Y
Sbjct: 8 YEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRKLY 67
Query: 69 D 69
D
Sbjct: 68 D 68
>sp|A8FFD1|DNAJ_BACP2 Chaperone protein DnaJ OS=Bacillus pumilus (strain SAFR-032)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN-GWD--FTEIHNAYETLSDPKARAVYD 69
YEVL V +A EIK YR L+K YH D++ G D F E+ AYETLSD + R+ YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRSQYD 66
>sp|B4F2V6|DNAJ_PROMH Chaperone protein DnaJ OS=Proteus mirabilis (strain HI4320)
GN=dnaJ PE=3 SV=1
Length = 378
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 12 LYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD----FTEIHNAYETLSDPKARAV 67
YEVL + TA EIK Y+ LA YH D + D F EI AYE LSDP+ RA
Sbjct: 6 FYEVLGLSKTADEKEIKRAYKRLAMKYHPDRNQGDKDSESKFKEIKEAYEVLSDPQKRAA 65
Query: 68 YD 69
YD
Sbjct: 66 YD 67
>sp|C0ZB49|DNAJ_BREBN Chaperone protein DnaJ OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=dnaJ PE=3 SV=1
Length = 375
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 8 MGGSLYEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNG---WDFTEIHNAYETLSDPKA 64
M LYEVL V A EIK YR LA+ YH D++ F E+ +AY+ LS+P+
Sbjct: 1 MKRDLYEVLGVAKDADADEIKKAYRKLARQYHPDVNKEADAEEKFKEVKDAYDILSEPQK 60
Query: 65 RAVYD 69
RA YD
Sbjct: 61 RAQYD 65
>sp|A7Z6W0|DNAJ_BACA2 Chaperone protein DnaJ OS=Bacillus amyloliquefaciens (strain
FZB42) GN=dnaJ PE=3 SV=1
Length = 375
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLS-SNGWD--FTEIHNAYETLSDPKARAVYD 69
YEVL V +A EIK YR L+K YH D++ +G D F E+ AYE LSD + RA YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYD 66
>sp|A6WX07|DNAJ_OCHA4 Chaperone protein DnaJ OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=dnaJ PE=3 SV=1
Length = 377
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNGWD----FTEIHNAYETLSDPKARAVY 68
YE L VE TA +KT +R LA YH D + N + F EI AYETL DP+ RA Y
Sbjct: 6 YEALGVERTADDKVLKTAFRKLAMEYHPDRNPNNPEAERKFKEIGEAYETLKDPQKRAAY 65
Query: 69 D 69
D
Sbjct: 66 D 66
>sp|A5UYW4|DNAJ_ROSS1 Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ
PE=3 SV=1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSN---GWDFTEIHNAYETLSDPKARAVYD 69
YEVL V+ A EIK +R LA+ YH D++ F EI+ AYE LSDP+ R++YD
Sbjct: 8 YEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSMYD 67
>sp|A7NS65|DNAJ_ROSCS Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=dnaJ PE=3 SV=1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPTAMISEIKTVYRSLAKVYHHDLSSNG---WDFTEIHNAYETLSDPKARAVYD 69
YEVL V+ A EIK +R LA+ YH D++ F EI+ AYE LSDP+ R++YD
Sbjct: 8 YEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSMYD 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,071,761
Number of Sequences: 539616
Number of extensions: 770514
Number of successful extensions: 4035
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 279
Number of HSP's that attempted gapping in prelim test: 2531
Number of HSP's gapped (non-prelim): 947
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)