Citrus Sinensis ID: 034973


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70-------
MDASMEDLAGCPGIVERKVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSVNEVTKVKKDTEERKQNVGRKNRN
ccccHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHcccccc
********AGCPGIVERKVKCLYDTFHEPFKR*********************************************
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MDASMEDLAGCPGIVERKVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSVNEVTKVKKDTEERKQNVGRKNRN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DNA excision repair protein ERCC-1 Seems to be involved in nucleotide excision repair (NER) of damaged DNA (dark repair mechanism). The UVH1/RAD1-ERCC1/RAD10 complex may act as an endonuclease making DNA incision 5' to the lesion site. In vitro, is implicated in double strand breaks (DSBs) repair and is required for homologous recombination in the presence of non-homologous overhangs. In vitro, is involved in chromosomal recombination between tandem repeats in both direct and inverted orientations. May mediate the induction of a DNA-damage sensitive cell-cycle checkpoint during the G2 phase.probableQ9MA98

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1Z00, chain A
Confidence level:confident
Coverage over the Query: 2-33
View the alignment between query and template
View the model in PyMOL