BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034974
(77 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O13825|YOS1_SCHPO Protein transport protein yos1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=yos1 PE=3 SV=1
Length = 81
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 2 GFWTFLEGLLLLANAFAILNEDRFLAPRRWT-LAELQAGGR-NTLKGQVIGLIHACQ-FM 58
GF L LLL NA AIL+EDRFL W+ A L G R +T+K +++ LI A + M
Sbjct: 3 GFGNILYVTLLLLNAVAILSEDRFLGRIGWSQSAALGFGDRQDTIKSRILHLIRAIRTVM 62
Query: 59 RLPLILLNLVTIIVKLVSG 77
PLI +N + I+ LV G
Sbjct: 63 TFPLIAINTIVIVYNLVLG 81
>sp|Q3B8G7|IR3IP_XENLA Immediate early response 3-interacting protein 1 OS=Xenopus
laevis GN=ier3ip1 PE=3 SV=1
Length = 82
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 4 WTFLEGLLLLANAFAILNEDRFLAPRRWTLAELQA--GGRNTLKGQVIGLIHACQ-FMRL 60
+T L+ LL NA A+L+E+RFL+ W + G +K Q++ LI + + MR+
Sbjct: 6 YTLLQAALLCVNAVAVLHEERFLSKIGWGVDHGIGGFGEEPGMKSQLMNLIRSVRTVMRV 65
Query: 61 PLILLNLVTIIVKLVSG 77
PLI++N VTI++ L+ G
Sbjct: 66 PLIIVNSVTIVLLLLFG 82
>sp|Q9CR20|IR3IP_MOUSE Immediate early response 3-interacting protein 1 OS=Mus musculus
GN=Ier3ip1 PE=2 SV=1
Length = 82
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 4 WTFLEGLLLLANAFAILNEDRFLAPRRWTLAELQA--GGRNTLKGQVIGLIHACQ-FMRL 60
++ ++ LL NA A+L+E+RFL W + G +K Q++ LI + + MR+
Sbjct: 6 YSLMQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMRV 65
Query: 61 PLILLNLVTIIVKLVSG 77
PLI++N +TI++ L+ G
Sbjct: 66 PLIIVNSITIVLLLLFG 82
>sp|P85007|IR3IP_RAT Immediate early response 3-interacting protein 1 OS=Rattus
norvegicus GN=Ier3ip1 PE=2 SV=1
Length = 82
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 4 WTFLEGLLLLANAFAILNEDRFLAPRRWTLAELQA--GGRNTLKGQVIGLIHACQ-FMRL 60
++ ++ LL NA A+L+E+RFL W + G +K Q++ LI + + MR+
Sbjct: 6 YSLMQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLLNLIRSVRTVMRV 65
Query: 61 PLILLNLVTIIVKLVSG 77
PLI++N +TI++ L+ G
Sbjct: 66 PLIIVNSITIVLLLLFG 82
>sp|Q3E834|YOS1_YEAST Protein transport protein YOS1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YOS1 PE=1 SV=1
Length = 85
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 10 LLLLANAFAILNEDRFLAPRRWTLAELQ------AGGRNTLKGQVIGLIHACQ-FMRLPL 62
+LLL NA A+L+E+RFL RR L +NT K +V+ LI A Q +R+PL
Sbjct: 13 ILLLINAVAVLSEERFL--RRIGLGRSNDETPVFGQDQNTTKSKVVQLIGAVQTLLRIPL 70
Query: 63 ILLNLVTIIVKLVSG 77
I +N++ I+ +L+ G
Sbjct: 71 IGINILVIVYELLLG 85
>sp|Q4VBI2|IR3IP_DANRE Immediate early response 3-interacting protein 1 OS=Danio rerio
GN=ier3ip1 PE=3 SV=1
Length = 82
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 4 WTFLEGLLLLANAFAILNEDRFLAPRRWTLAELQAGGRNT---LKGQVIGLIHACQ-FMR 59
+ ++ +L NA A+L+E+RFL+ W AE GG +K Q++ LI + + MR
Sbjct: 6 YALIQTAILFTNAIAVLHEERFLSKIGWG-AEQGVGGFGDDPGIKAQLLNLIRSVRTVMR 64
Query: 60 LPLILLNLVTIIVKLVSG 77
+PLI +N V I++ L+ G
Sbjct: 65 VPLIAVNSVCIVLLLLFG 82
>sp|Q9Y5U9|IR3IP_HUMAN Immediate early response 3-interacting protein 1 OS=Homo sapiens
GN=IER3IP1 PE=1 SV=1
Length = 82
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 4 WTFLEGLLLLANAFAILNEDRFLAPRRWTLAELQA--GGRNTLKGQVIGLIHACQ-FMRL 60
++ L+ LL NA A+L+E+RFL W + G +K Q++ LI + + MR+
Sbjct: 6 YSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMRV 65
Query: 61 PLILLNLVTIIVKLVSG 77
PLI++N + I++ L+ G
Sbjct: 66 PLIIVNSIAIVLLLLFG 82
>sp|Q1JQC2|IR3IP_BOVIN Immediate early response 3-interacting protein 1 OS=Bos taurus
GN=IER3IP1 PE=3 SV=1
Length = 82
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 4 WTFLEGLLLLANAFAILNEDRFLAPRRWTLAELQA--GGRNTLKGQVIGLIHACQ-FMRL 60
++ L+ LL NA A+L+E+RFL W + G +K Q++ LI + + MR+
Sbjct: 6 YSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMRV 65
Query: 61 PLILLNLVTIIVKLVSG 77
PLI++N + I++ L+ G
Sbjct: 66 PLIIVNSIAIVLLLLFG 82
>sp|Q54WR6|YOS1_DICDI Protein transport protein yos1 OS=Dictyostelium discoideum
GN=yos1 PE=3 SV=1
Length = 66
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Query: 1 MGFWTFLEGLLLLANAFAILNEDRFLAPRRWTL-AELQAGGRNTLKGQVIGLIHACQF 57
+ F FL+ LL+ N+FAILNE RFL W + ++L N+ KG++I L+H+ +F
Sbjct: 4 LSFMGFLQSCLLIVNSFAILNE-RFLNKIGWGVKSDLDM---NSFKGKIITLLHSLRF 57
>sp|A4IIJ3|KIBRA_XENTR Protein KIBRA OS=Xenopus tropicalis GN=wwc1 PE=2 SV=1
Length = 1108
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 21/28 (75%)
Query: 10 LLLLANAFAILNEDRFLAPRRWTLAELQ 37
L+L++ +L E RF++PR+W+ +E++
Sbjct: 341 LILISEKEELLKEMRFISPRKWSQSEVE 368
>sp|Q5SXA9|KIBRA_MOUSE Protein KIBRA OS=Mus musculus GN=Wwc1 PE=1 SV=1
Length = 1104
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 10 LLLLANAFAILNEDRFLAPRRWTLAELQ 37
L+L+ +L E RF++PR+WT E++
Sbjct: 341 LILINEKEELLKEMRFISPRKWTQGEVE 368
>sp|Q8IX03|KIBRA_HUMAN Protein KIBRA OS=Homo sapiens GN=WWC1 PE=1 SV=1
Length = 1113
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 10 LLLLANAFAILNEDRFLAPRRWTLAELQ 37
L+L+ +L E RF++PR+WT E++
Sbjct: 341 LILINEKEELLKEMRFISPRKWTQGEVE 368
>sp|Q5X1Q9|AMPA_LEGPA Probable cytosol aminopeptidase OS=Legionella pneumophila (strain
Paris) GN=pepA PE=3 SV=1
Length = 483
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 46 GQVIGLIHACQFMRLPLILLNLVTIIVKLVSG 77
V+G+I AC ++LP+ L+ ++ L+SG
Sbjct: 280 ASVLGVIKACALLKLPINLIGIIASAENLISG 311
>sp|Q5WTG8|AMPA_LEGPL Probable cytosol aminopeptidase OS=Legionella pneumophila (strain
Lens) GN=pepA PE=3 SV=1
Length = 483
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 46 GQVIGLIHACQFMRLPLILLNLVTIIVKLVSG 77
V+G+I AC ++LP+ L+ ++ L+SG
Sbjct: 280 ASVLGVIKACALLKLPINLIGIIASAENLISG 311
>sp|A5IAU5|AMPA_LEGPC Probable cytosol aminopeptidase OS=Legionella pneumophila (strain
Corby) GN=pepA PE=3 SV=1
Length = 483
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 46 GQVIGLIHACQFMRLPLILLNLVTIIVKLVSG 77
V+G+I AC ++LP+ L+ ++ L+SG
Sbjct: 280 ASVLGVIKACALLKLPINLIGIIASAENLISG 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.146 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,628,749
Number of Sequences: 539616
Number of extensions: 816708
Number of successful extensions: 1898
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1883
Number of HSP's gapped (non-prelim): 16
length of query: 77
length of database: 191,569,459
effective HSP length: 48
effective length of query: 29
effective length of database: 165,667,891
effective search space: 4804368839
effective search space used: 4804368839
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)