BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034996
MAAITVAIIAIAGVVLGWIAIEMACKPCLEKGREAIDQSLNPDYDPDGDADTNIRAPLYP
HHPAAAPSPSPSDPAV

High Scoring Gene Products

Symbol, full name Information P value
AT2G34585 protein from Arabidopsis thaliana 1.8e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034996
        (76 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006290 - symbol:AT2G34585 "AT2G34585" speci...   138  1.8e-09   1


>TAIR|locus:505006290 [details] [associations]
            symbol:AT2G34585 "AT2G34585" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005773 "vacuole"
            evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
            GO:GO:0005774 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004077
            EMBL:AY085890 EMBL:BT024525 EMBL:AK175312 EMBL:AK176185
            EMBL:AK176240 EMBL:AK176764 EMBL:AK176843 EMBL:AK176845
            IPI:IPI00532308 RefSeq:NP_565793.1 UniGene:At.66310 STRING:Q8S8R9
            PaxDb:Q8S8R9 PRIDE:Q8S8R9 EnsemblPlants:AT2G34585.1 GeneID:818023
            KEGG:ath:AT2G34585 TAIR:At2g34585 eggNOG:NOG242449
            HOGENOM:HOG000242141 InParanoid:Q8S8R9 OMA:WITIELA
            ProtClustDB:CLSN2688682 ArrayExpress:Q8S8R9 Genevestigator:Q8S8R9
            Uniprot:Q8S8R9
        Length = 81

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 25/33 (75%), Positives = 29/33 (87%)

Query:    22 EMACKPCLEKGREAIDQSLNPDYDPDG-DADTN 53
             E+ACKPCLE GREAID+SLNPDYDPD  D D++
Sbjct:    22 ELACKPCLESGREAIDRSLNPDYDPDDQDVDSS 54


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.136   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       76        36   0.00091  102 3  11 23  0.35    26
                                                     29  0.47    22


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  381 (41 KB)
  Total size of DFA:  63 KB (2060 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.09u 0.10s 7.19t   Elapsed:  00:00:01
  Total cpu time:  7.09u 0.10s 7.19t   Elapsed:  00:00:01
  Start:  Fri May 10 04:30:34 2013   End:  Fri May 10 04:30:35 2013

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