Query 034996
Match_columns 76
No_of_seqs 35 out of 37
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 13:37:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034996.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034996hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 44.3 50 0.0017 22.6 5.2 38 12-49 288-326 (479)
2 2l02_A Uncharacterized protein 44.2 9.3 0.00032 24.3 1.4 11 12-22 39-49 (82)
3 2l01_A Uncharacterized protein 43.6 8.9 0.0003 24.2 1.2 11 12-22 42-52 (77)
4 3e6i_A CYPIIE1, P450-J, cytoch 41.5 55 0.0019 22.5 5.1 37 13-49 284-321 (476)
5 3k9v_A 1,25-dihydroxyvitamin D 40.8 57 0.002 22.4 5.0 37 13-49 300-337 (482)
6 3swz_A Steroid 17-alpha-hydrox 37.2 71 0.0024 22.3 5.1 37 13-49 290-327 (494)
7 1d2t_A Acid phosphatase; all a 35.8 47 0.0016 22.5 4.0 30 10-39 194-228 (231)
8 2ipb_A PHON protein, class A n 34.2 65 0.0022 21.7 4.5 32 10-41 182-218 (230)
9 3s8f_C Cytochrome C oxidase po 32.7 61 0.0021 17.6 3.4 24 2-25 7-30 (34)
10 3pm0_A Cypib1, cytochrome P450 31.8 97 0.0033 21.5 5.1 36 13-48 296-332 (507)
11 2pjv_A Envelope glycoprotein; 31.0 7.9 0.00027 21.1 -0.5 11 10-20 3-13 (31)
12 1vf5_F Protein PET M; photosyn 29.8 57 0.002 17.9 2.9 20 4-23 10-29 (35)
13 1q90_M Cytochrome B6F complex 27.5 75 0.0026 17.8 3.2 20 4-23 11-30 (39)
14 1b9u_A Protein (ATP synthase); 26.5 68 0.0023 16.0 3.0 20 11-30 12-31 (34)
15 3nxu_A Cytochrome P450 3A4; al 26.0 95 0.0032 21.5 4.2 35 13-47 289-324 (485)
16 2f95_B Sensory rhodopsin II tr 22.8 37 0.0013 20.0 1.4 28 10-38 69-96 (163)
17 1ifp_A PF3 inovirus, major coa 22.7 1.1E+02 0.0038 17.5 3.4 14 4-17 22-35 (44)
18 2hi4_A Cytochrome P450 1A2; CY 22.1 1.2E+02 0.0042 21.3 4.2 35 13-47 299-334 (495)
19 3czh_A Cytochrome P450 2R1; vi 22.1 1.1E+02 0.0038 21.5 4.0 35 13-47 290-325 (481)
20 2z6o_A UFM1-conjugating enzyme 20.7 52 0.0018 23.4 2.1 16 10-25 139-157 (172)
21 3mdm_A Cholesterol 24-hydroxyl 20.6 1.3E+02 0.0045 20.6 4.0 35 13-47 260-295 (456)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=44.34 E-value=50 Score=22.65 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhhhh-hHHHhHHHhhhcCCCCCCCCCC
Q 034996 12 AGVVLGWIAIEMACKP-CLEKGREAIDQSLNPDYDPDGD 49 (76)
Q Consensus 12 gaLAlGWlaIElAfKP-~Ldk~R~AidrSldP~~DPDd~ 49 (76)
.+.++.|...+++-.| ..+|+|+.|+..+..+.+++.+
T Consensus 288 ta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~ 326 (479)
T 3tbg_A 288 TSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMG 326 (479)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCHH
T ss_pred hHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhccccchh
Confidence 3578999999999998 7799999999887777666643
No 2
>2l02_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=44.16 E-value=9.3 Score=24.34 Aligned_cols=11 Identities=36% Similarity=0.969 Sum_probs=8.7
Q ss_pred HHHHHHHHHHH
Q 034996 12 AGVVLGWIAIE 22 (76)
Q Consensus 12 gaLAlGWlaIE 22 (76)
..+|+|||+=|
T Consensus 39 l~lAIGWLaRE 49 (82)
T 2l02_A 39 TALAVGWLARE 49 (82)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcc
Confidence 47899999854
No 3
>2l01_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Bacteroides vulgatus}
Probab=43.64 E-value=8.9 Score=24.23 Aligned_cols=11 Identities=36% Similarity=0.564 Sum_probs=8.8
Q ss_pred HHHHHHHHHHH
Q 034996 12 AGVVLGWIAIE 22 (76)
Q Consensus 12 gaLAlGWlaIE 22 (76)
..+|+|||+=|
T Consensus 42 l~lAiGWLaRE 52 (77)
T 2l01_A 42 FFLGLGWLLRE 52 (77)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhc
Confidence 46899999855
No 4
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=41.48 E-value=55 Score=22.49 Aligned_cols=37 Identities=24% Similarity=0.250 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhhhh-hHHHhHHHhhhcCCCCCCCCCC
Q 034996 13 GVVLGWIAIEMACKP-CLEKGREAIDQSLNPDYDPDGD 49 (76)
Q Consensus 13 aLAlGWlaIElAfKP-~Ldk~R~AidrSldP~~DPDd~ 49 (76)
+.+++|+..+++--| .++|+|+.|++.+.++..|..+
T Consensus 284 a~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~ 321 (476)
T 3e6i_A 284 STTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIK 321 (476)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTSCCCGG
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCCChh
Confidence 568999999999887 5789999999987766666543
No 5
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=40.81 E-value=57 Score=22.38 Aligned_cols=37 Identities=16% Similarity=0.351 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhhhh-hHHHhHHHhhhcCCCCCCCCCC
Q 034996 13 GVVLGWIAIEMACKP-CLEKGREAIDQSLNPDYDPDGD 49 (76)
Q Consensus 13 aLAlGWlaIElAfKP-~Ldk~R~AidrSldP~~DPDd~ 49 (76)
+.++.|...+++-.| .++|+|+.|++-+.....|+.+
T Consensus 300 a~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~ 337 (482)
T 3k9v_A 300 ANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAE 337 (482)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTTCCCCGG
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHH
Confidence 568999999999998 5899999999876655555543
No 6
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=37.18 E-value=71 Score=22.30 Aligned_cols=37 Identities=24% Similarity=0.282 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhhhh-hHHHhHHHhhhcCCCCCCCCCC
Q 034996 13 GVVLGWIAIEMACKP-CLEKGREAIDQSLNPDYDPDGD 49 (76)
Q Consensus 13 aLAlGWlaIElAfKP-~Ldk~R~AidrSldP~~DPDd~ 49 (76)
+.++.|+..+++--| .++|+|+.|++.+..++.|.-+
T Consensus 290 a~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~ 327 (494)
T 3swz_A 290 TSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTIS 327 (494)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGG
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCCHH
Confidence 568899999999988 6789999999877666666543
No 7
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A
Probab=35.80 E-value=47 Score=22.51 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHH-----HHhhhhhHHHhHHHhhhc
Q 034996 10 AIAGVVLGWIAI-----EMACKPCLEKGREAIDQS 39 (76)
Q Consensus 10 VvgaLAlGWlaI-----ElAfKP~Ldk~R~AidrS 39 (76)
|++|.++|++.. .-.||-.|+++|+.+.+-
T Consensus 194 VlaG~~lG~~~~~~~~~~~~~~~~~~~a~~e~~~~ 228 (231)
T 1d2t_A 194 VDAARVVGSAVVATLHTNPAFQQQLQKAKAEFAQH 228 (231)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 345555554443 346788899999887653
No 8
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A
Probab=34.18 E-value=65 Score=21.73 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHH-----HhhhhhHHHhHHHhhhcCC
Q 034996 10 AIAGVVLGWIAIE-----MACKPCLEKGREAIDQSLN 41 (76)
Q Consensus 10 VvgaLAlGWlaIE-----lAfKP~Ldk~R~AidrSld 41 (76)
|++|.++|.+... -.|+-.|+++|+.+.+-+.
T Consensus 182 VlaG~~lG~~~~~~~~~~~~~~~~~~~a~~e~~~~~~ 218 (230)
T 2ipb_A 182 VDAGRYVGAVEFARLQTIPAFQKSLAKVREELNDKNN 218 (230)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHc
Confidence 3445555544333 4688889999988877653
No 9
>3s8f_C Cytochrome C oxidase polypeptide 2A; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 2qpd_C* 2qpe_C* 3bvd_C* 3qjq_C* 3qjr_C* 3qjs_C* 3qjt_C* 3qju_C* 3qjv_C* 1xme_C* 3s8g_C* 4esl_C* 4ev3_C* 4f05_C* 4fa7_C* 4faa_C* 1ehk_C* 3eh3_C* 3eh4_C* 3eh5_C* ...
Probab=32.69 E-value=61 Score=17.61 Aligned_cols=24 Identities=13% Similarity=0.400 Sum_probs=17.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhh
Q 034996 2 AAITVAIIAIAGVVLGWIAIEMAC 25 (76)
Q Consensus 2 gAiksavVVvgaLAlGWlaIElAf 25 (76)
|++.+-.+|-+.+.+.|+.+-.-|
T Consensus 7 GTl~~V~ilg~~I~i~W~~vf~lF 30 (34)
T 3s8f_C 7 GALAVILVLTLTILVFWLGVYAVF 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceehHHHHHHHHHHHHHHHHHeee
Confidence 566667777788889999886544
No 10
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=31.81 E-value=97 Score=21.46 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhhh-hHHHhHHHhhhcCCCCCCCCC
Q 034996 13 GVVLGWIAIEMACKP-CLEKGREAIDQSLNPDYDPDG 48 (76)
Q Consensus 13 aLAlGWlaIElAfKP-~Ldk~R~AidrSldP~~DPDd 48 (76)
+.++.|+..+++--| .++|.|+.|+.....+..|.-
T Consensus 296 a~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~ 332 (507)
T 3pm0_A 296 STALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCM 332 (507)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHTCTTSCCCG
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCCh
Confidence 568999999999988 679999999987665555543
No 11
>2pjv_A Envelope glycoprotein; HIV, GP41, fusion, peptide, domain, membrane, DPC, viral protein; NMR {Human immunodeficiency virus 1}
Probab=31.05 E-value=7.9 Score=21.14 Aligned_cols=11 Identities=27% Similarity=0.755 Sum_probs=8.9
Q ss_pred HHHHHHHHHHH
Q 034996 10 AIAGVVLGWIA 20 (76)
Q Consensus 10 VvgaLAlGWla 20 (76)
.+|+++||||.
T Consensus 3 ~lGa~FLGFLg 13 (31)
T 2pjv_A 3 GIGALFLGFLG 13 (31)
T ss_dssp SHHHHHHTHHH
T ss_pred hhhhHHHHHhh
Confidence 47889999885
No 12
>1vf5_F Protein PET M; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.25.1 PDB: 2d2c_F* 2e74_F* 2e75_F* 2e76_F* 2zt9_F*
Probab=29.77 E-value=57 Score=17.88 Aligned_cols=20 Identities=15% Similarity=0.228 Sum_probs=12.6
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 034996 4 ITVAIIAIAGVVLGWIAIEM 23 (76)
Q Consensus 4 iksavVVvgaLAlGWlaIEl 23 (76)
+..-..++.+|++|.+...+
T Consensus 10 ~i~~~LvLvGla~Gf~LLki 29 (35)
T 1vf5_F 10 LLSFGLIFVGWGLGVLLLKI 29 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhee
Confidence 34445566777888776553
No 13
>1q90_M Cytochrome B6F complex subunit PETM; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.25.1
Probab=27.47 E-value=75 Score=17.78 Aligned_cols=20 Identities=15% Similarity=0.612 Sum_probs=12.3
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 034996 4 ITVAIIAIAGVVLGWIAIEM 23 (76)
Q Consensus 4 iksavVVvgaLAlGWlaIEl 23 (76)
+..-.+++.+|++|.+...+
T Consensus 11 ~i~~~L~LvGla~Gf~LLki 30 (39)
T 1q90_M 11 LTMVGMTLVGLAIGFVLLRV 30 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhh
Confidence 33445566677777776543
No 14
>1b9u_A Protein (ATP synthase); membrane protein, hydrolase; HET: GMA; NMR {Synthetic} SCOP: j.35.1.1
Probab=26.52 E-value=68 Score=16.00 Aligned_cols=20 Identities=20% Similarity=0.281 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhhhhhHH
Q 034996 11 IAGVVLGWIAIEMACKPCLE 30 (76)
Q Consensus 11 vgaLAlGWlaIElAfKP~Ld 30 (76)
+.-+++-|+.--.+|||..+
T Consensus 12 i~Flil~~~l~kf~~~Pi~~ 31 (34)
T 1b9u_A 12 IAFVLFVLFCMKYVWPPLMA 31 (34)
T ss_dssp HHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34567889999999999875
No 15
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=25.96 E-value=95 Score=21.46 Aligned_cols=35 Identities=34% Similarity=0.466 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhhhh-hHHHhHHHhhhcCCCCCCCC
Q 034996 13 GVVLGWIAIEMACKP-CLEKGREAIDQSLNPDYDPD 47 (76)
Q Consensus 13 aLAlGWlaIElAfKP-~Ldk~R~AidrSldP~~DPD 47 (76)
+.++.|...+++-.| .++|+|+.|++.+.....|+
T Consensus 289 a~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~ 324 (485)
T 3nxu_A 289 SSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPT 324 (485)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCCCC
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCCCC
Confidence 568999999999888 57899999998765544444
No 16
>2f95_B Sensory rhodopsin II transducer; membrane protein complex, signal transduction, photocycle ST membrane protein; HET: BOG RET; 2.20A {Natronomonas pharaonis} SCOP: f.17.4.1
Probab=22.84 E-value=37 Score=20.02 Aligned_cols=28 Identities=4% Similarity=-0.204 Sum_probs=4.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhHHHhhh
Q 034996 10 AIAGVVLGWIAIEMACKPCLEKGREAIDQ 38 (76)
Q Consensus 10 VvgaLAlGWlaIElAfKP~Ldk~R~Aidr 38 (76)
++.+++++|+....-.||. .+..+.+++
T Consensus 69 ~~~~~~~~~~~~~~i~~pl-~~l~~~~~~ 96 (163)
T 2f95_B 69 GINLGLVAATLGGDTAASL-STLAAKASR 96 (163)
T ss_dssp HHHHHHHC---------------------
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 3344556666666667884 445544544
No 17
>1ifp_A PF3 inovirus, major coat protein assembly; virus coat protein, helical virus; 3.10A {Pseudomonas phage PF3} SCOP: h.1.4.1
Probab=22.69 E-value=1.1e+02 Score=17.50 Aligned_cols=14 Identities=64% Similarity=0.790 Sum_probs=11.3
Q ss_pred hhHHHHHHHHHHHH
Q 034996 4 ITVAIIAIAGVVLG 17 (76)
Q Consensus 4 iksavVVvgaLAlG 17 (76)
+..++||+++++||
T Consensus 22 iggaiivlaavvlg 35 (44)
T 1ifp_A 22 IGGAIIVLAAVVLG 35 (44)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred ecchhHHHHHHHHH
Confidence 45678999998888
No 18
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=22.13 E-value=1.2e+02 Score=21.30 Aligned_cols=35 Identities=17% Similarity=0.403 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhhhh-hHHHhHHHhhhcCCCCCCCC
Q 034996 13 GVVLGWIAIEMACKP-CLEKGREAIDQSLNPDYDPD 47 (76)
Q Consensus 13 aLAlGWlaIElAfKP-~Ldk~R~AidrSldP~~DPD 47 (76)
+.++.|+..+++-.| .++|+|+.|++....+..|.
T Consensus 299 a~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~ 334 (495)
T 2hi4_A 299 TTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPR 334 (495)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTSSCCC
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCCCCCC
Confidence 568999999999888 67899999998765544454
No 19
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=22.10 E-value=1.1e+02 Score=21.48 Aligned_cols=35 Identities=29% Similarity=0.435 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhhhh-hHHHhHHHhhhcCCCCCCCC
Q 034996 13 GVVLGWIAIEMACKP-CLEKGREAIDQSLNPDYDPD 47 (76)
Q Consensus 13 aLAlGWlaIElAfKP-~Ldk~R~AidrSldP~~DPD 47 (76)
+.+++|...+++--| .++|+|+.|++.+..+.+|.
T Consensus 290 a~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~ 325 (481)
T 3czh_A 290 TNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPS 325 (481)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCC
T ss_pred HHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCC
Confidence 568999999999988 67899999998765444554
No 20
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=20.69 E-value=52 Score=23.37 Aligned_cols=16 Identities=31% Similarity=0.642 Sum_probs=10.8
Q ss_pred HHHHHHHH---HHHHHHhh
Q 034996 10 AIAGVVLG---WIAIEMAC 25 (76)
Q Consensus 10 VvgaLAlG---WlaIElAf 25 (76)
+..+|+|| ||++|+..
T Consensus 139 IahiL~lgl~pwla~eip~ 157 (172)
T 2z6o_A 139 LAHLMALGLGPWLAVEIPD 157 (172)
T ss_dssp HHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHhhccCchhhhhhHH
Confidence 34455555 99999864
No 21
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=20.57 E-value=1.3e+02 Score=20.61 Aligned_cols=35 Identities=14% Similarity=0.303 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhhhh-hHHHhHHHhhhcCCCCCCCC
Q 034996 13 GVVLGWIAIEMACKP-CLEKGREAIDQSLNPDYDPD 47 (76)
Q Consensus 13 aLAlGWlaIElAfKP-~Ldk~R~AidrSldP~~DPD 47 (76)
+.++.|+..+++--| .++|+|+.|++.+.....|+
T Consensus 260 a~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~ 295 (456)
T 3mdm_A 260 ANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLD 295 (456)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCC
Confidence 568899999999888 56899999998765555554
Done!