BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034999
MERSVRLFSTVLLVLLLLASEMGLRAAEARICESQSHRFKGPCVSKSNCAAVCQTEGFHG
GHCRGFRRRCFCTKRC

High Scoring Gene Products

Symbol, full name Information P value
LCR69
low-molecular-weight cysteine-rich 69
protein from Arabidopsis thaliana 2.2e-09
LCR68
low-molecular-weight cysteine-rich 68
protein from Arabidopsis thaliana 2.9e-09
LCR66
low-molecular-weight cysteine-rich 66
protein from Arabidopsis thaliana 4.2e-08
PDF2.1 protein from Arabidopsis thaliana 6.1e-07
Def2
Defensin-2
protein from Pinus sylvestris 1.1e-05
Def1
Defensin-1
protein from Pinus sylvestris 2.4e-05
LCR72
low-molecular-weight cysteine-rich 72
protein from Arabidopsis thaliana 6.3e-05
PDF2.5 protein from Arabidopsis thaliana 0.00010
LCR73
low-molecular-weight cysteine-rich 73
protein from Arabidopsis thaliana 0.00035

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034999
        (76 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2051668 - symbol:LCR69 "low-molecular-weight c...   137  2.2e-09   1
TAIR|locus:2051638 - symbol:LCR68 "low-molecular-weight c...   136  2.9e-09   1
TAIR|locus:2206056 - symbol:LCR66 "low-molecular-weight c...   125  4.2e-08   1
TAIR|locus:2051648 - symbol:PDF2.1 species:3702 "Arabidop...   114  6.1e-07   1
UNIPROTKB|A4L7R8 - symbol:Def2 "Defensin-2" species:3349 ...   102  1.1e-05   1
UNIPROTKB|A4L7R7 - symbol:Def1 "Defensin-1" species:3349 ...    99  2.4e-05   1
TAIR|locus:2051703 - symbol:LCR72 "low-molecular-weight c...    95  6.3e-05   1
TAIR|locus:2160569 - symbol:PDF2.5 species:3702 "Arabidop...    93  0.00010   1
TAIR|locus:1009023182 - symbol:LCR73 "low-molecular-weigh...    88  0.00035   1


>TAIR|locus:2051668 [details] [associations]
            symbol:LCR69 "low-molecular-weight cysteine-rich 69"
            species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
            region" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0030414 "peptidase inhibitor activity"
            evidence=ISS] [GO:0009505 "plant-type cell wall" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005618 "cell wall"
            evidence=IDA] InterPro:IPR003614 InterPro:IPR008176
            InterPro:IPR008177 Pfam:PF00304 PRINTS:PR00288 PROSITE:PS00940
            SMART:SM00505 GO:GO:0005886 GO:GO:0005576 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0050832 GO:GO:0031640
            GO:GO:0009505 EMBL:AC005936 HOGENOM:HOG000238637
            ProtClustDB:CLSN2683671 EMBL:AY803259 EMBL:AY803262 EMBL:X69139
            EMBL:AF370355 EMBL:Z18455 IPI:IPI00524928 PIR:S30578
            RefSeq:NP_178319.1 UniGene:At.24172 ProteinModelPortal:Q39182
            SMR:Q39182 IntAct:Q39182 STRING:Q39182 PaxDb:Q39182 PRIDE:Q39182
            EnsemblPlants:AT2G02100.1 GeneID:814741 KEGG:ath:AT2G02100
            GeneFarm:4605 TAIR:At2g02100 eggNOG:NOG286151 InParanoid:Q39182
            OMA:SSNNCAN PhylomeDB:Q39182 Genevestigator:Q39182
            GermOnline:AT2G02100 Uniprot:Q39182
        Length = 77

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 31/57 (54%), Positives = 34/57 (59%)

Query:     1 MERSVRLFSTXXXXXXXX-ASEMGLRAAEARICESQSHRFKGPCVSKSNCAAVCQTE 56
             M+ S+RL S          A+ MG    EAR CESQSHRFKG CVS SNCA VC  E
Sbjct:     1 MKLSMRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNE 57


>TAIR|locus:2051638 [details] [associations]
            symbol:LCR68 "low-molecular-weight cysteine-rich 68"
            species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
            region" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0030414 "peptidase inhibitor activity"
            evidence=ISS] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005618
            "cell wall" evidence=IDA] [GO:0000271 "polysaccharide biosynthetic
            process" evidence=RCA] [GO:0007389 "pattern specification process"
            evidence=RCA] [GO:0008361 "regulation of cell size" evidence=RCA]
            [GO:0009825 "multidimensional cell growth" evidence=RCA]
            [GO:0009926 "auxin polar transport" evidence=RCA] [GO:0009932 "cell
            tip growth" evidence=RCA] [GO:0010015 "root morphogenesis"
            evidence=RCA] [GO:0010075 "regulation of meristem growth"
            evidence=RCA] [GO:0010817 "regulation of hormone levels"
            evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
            evidence=RCA] [GO:0040007 "growth" evidence=RCA] [GO:0043481
            "anthocyanin accumulation in tissues in response to UV light"
            evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
            [GO:0071555 "cell wall organization" evidence=RCA]
            InterPro:IPR003614 InterPro:IPR008176 InterPro:IPR008177
            Pfam:PF00304 PRINTS:PR00288 PROSITE:PS00940 SMART:SM00505
            GO:GO:0009506 GO:GO:0005618 GO:GO:0005576 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0050832 GO:GO:0031640
            EMBL:AC005936 EMBL:AY050979 EMBL:AY079405 EMBL:AY803260
            IPI:IPI00544854 PIR:C84433 RefSeq:NP_178321.1 UniGene:At.26534
            ProteinModelPortal:Q9ZUL7 SMR:Q9ZUL7 STRING:Q9ZUL7 PRIDE:Q9ZUL7
            EnsemblPlants:AT2G02130.1 GeneID:814744 KEGG:ath:AT2G02130
            GeneFarm:4604 TAIR:At2g02130 eggNOG:NOG249031 HOGENOM:HOG000238637
            InParanoid:Q9ZUL7 OMA:STHNCAN PhylomeDB:Q9ZUL7
            ProtClustDB:CLSN2683671 Genevestigator:Q9ZUL7 GermOnline:AT2G02130
            Uniprot:Q9ZUL7
        Length = 77

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 30/57 (52%), Positives = 33/57 (57%)

Query:     1 MERSVRLFSTXXXXXXXX-ASEMGLRAAEARICESQSHRFKGPCVSKSNCAAVCQTE 56
             M+ SVR  S          A+ MG    EAR CES+SHRFKGPCVS  NCA VC  E
Sbjct:     1 MKLSVRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNE 57


>TAIR|locus:2206056 [details] [associations]
            symbol:LCR66 "low-molecular-weight cysteine-rich 66"
            species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
            region" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] InterPro:IPR003614 InterPro:IPR008176
            InterPro:IPR008177 Pfam:PF00304 PRINTS:PR00288 PROSITE:PS00940
            SMART:SM00505 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005576
            GO:GO:0006952 GO:GO:0050832 GO:GO:0031640 EMBL:AC018908
            HOGENOM:HOG000238637 EMBL:DQ446381 EMBL:DQ652906 EMBL:AY085425
            IPI:IPI00530751 PIR:D96636 RefSeq:NP_176302.2 UniGene:At.17788
            ProteinModelPortal:Q9C947 SMR:Q9C947 STRING:Q9C947
            EnsemblPlants:AT1G61070.1 GeneID:842399 KEGG:ath:AT1G61070
            GeneFarm:4602 TAIR:At1g61070 eggNOG:NOG241960 InParanoid:Q9C947
            OMA:QARECEK PhylomeDB:Q9C947 ProtClustDB:CLSN2917892
            Genevestigator:Q9C947 Uniprot:Q9C947
        Length = 76

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 27/56 (48%), Positives = 32/56 (57%)

Query:     1 MERSVRLFSTXXXXXXXXASEMGLRAAEARICESQSHRFKGPCVSKSNCAAVCQTE 56
             M+ S RL S         A+ MGL   EAR CE+ S+ F GPC+S SNCA VC  E
Sbjct:     1 MKVSPRLNSALLLLFMILATVMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNE 56


>TAIR|locus:2051648 [details] [associations]
            symbol:PDF2.1 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006952
            "defense response" evidence=IEA;ISS] [GO:0030414 "peptidase
            inhibitor activity" evidence=ISS] InterPro:IPR003614
            InterPro:IPR008176 InterPro:IPR008177 Pfam:PF00304 PRINTS:PR00288
            PROSITE:PS00940 SMART:SM00505 GO:GO:0005576 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0050832 GO:GO:0031640
            EMBL:AC005936 HOGENOM:HOG000238637 ProtClustDB:CLSN2683671
            EMBL:AK117966 EMBL:BT004647 EMBL:Z17665 IPI:IPI00540135 PIR:B84433
            RefSeq:NP_178320.1 UniGene:At.42941 ProteinModelPortal:Q41914
            SMR:Q41914 PaxDb:Q41914 PRIDE:Q41914 EnsemblPlants:AT2G02120.1
            GeneID:814743 KEGG:ath:AT2G02120 GeneFarm:4606 TAIR:At2g02120
            eggNOG:euNOG12549 InParanoid:Q41914 OMA:EARTCAS PhylomeDB:Q41914
            Genevestigator:Q41914 GermOnline:AT2G02120 Uniprot:Q41914
        Length = 77

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 27/57 (47%), Positives = 31/57 (54%)

Query:     1 MERSVRLFSTXXXXXXXX-ASEMGLRAAEARICESQSHRFKGPCVSKSNCAAVCQTE 56
             M+ S+RL S          A+ MG    EAR C SQS RFKG CVS +NC  VC  E
Sbjct:     1 MKFSMRLISAVLFLVMIFVATGMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNE 57


>UNIPROTKB|A4L7R8 [details] [associations]
            symbol:Def2 "Defensin-2" species:3349 "Pinus sylvestris"
            [GO:0005576 "extracellular region" evidence=ISS] [GO:0050832
            "defense response to fungus" evidence=ISS] InterPro:IPR003614
            InterPro:IPR008176 InterPro:IPR008177 Pfam:PF00304 PRINTS:PR00288
            PROSITE:PS00940 SMART:SM00505 GO:GO:0005576 GO:GO:0050832
            GO:GO:0031640 EMBL:EF455617 Uniprot:A4L7R8
        Length = 83

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 18/35 (51%), Positives = 26/35 (74%)

Query:    22 MGLRAAEARICESQSHRFKGPCVSKSNCAAVCQTE 56
             M ++ AE R+C++ S +FKG CVS +NC  VC+TE
Sbjct:    26 MEVQVAEGRMCKTPSAKFKGYCVSSTNCKNVCRTE 60


>UNIPROTKB|A4L7R7 [details] [associations]
            symbol:Def1 "Defensin-1" species:3349 "Pinus sylvestris"
            [GO:0005576 "extracellular region" evidence=IDA] [GO:0050832
            "defense response to fungus" evidence=IDA] [GO:0050829 "defense
            response to Gram-negative bacterium" evidence=IDA]
            InterPro:IPR003614 InterPro:IPR008176 InterPro:IPR008177
            Pfam:PF00304 PRINTS:PR00288 PROSITE:PS00940 SMART:SM00505
            GO:GO:0005576 GO:GO:0050832 GO:GO:0031640 EMBL:EF455616
            Uniprot:A4L7R7
        Length = 83

 Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 17/35 (48%), Positives = 26/35 (74%)

Query:    22 MGLRAAEARICESQSHRFKGPCVSKSNCAAVCQTE 56
             M ++ AE R+C++ S +FKG CV+ +NC  VC+TE
Sbjct:    26 MQVQVAEGRMCKTPSGKFKGYCVNNTNCKNVCRTE 60


>TAIR|locus:2051703 [details] [associations]
            symbol:LCR72 "low-molecular-weight cysteine-rich 72"
            species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
            region" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0030414 "peptidase inhibitor activity"
            evidence=ISS] [GO:0009827 "plant-type cell wall modification"
            evidence=RCA] InterPro:IPR003614 InterPro:IPR008176
            InterPro:IPR008177 Pfam:PF00304 PRINTS:PR00288 PROSITE:PS00940
            SMART:SM00505 GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006952 GO:GO:0050832 GO:GO:0031640 EMBL:AC005936
            HOGENOM:HOG000238637 EMBL:BT028882 EMBL:AY087062 IPI:IPI00536046
            PIR:D84433 RefSeq:NP_178322.1 UniGene:At.41516
            ProteinModelPortal:Q9ZUL8 SMR:Q9ZUL8 PaxDb:Q9ZUL8 PRIDE:Q9ZUL8
            EnsemblPlants:AT2G02140.1 GeneID:814745 KEGG:ath:AT2G02140
            GeneFarm:4608 TAIR:At2g02140 eggNOG:NOG294089 InParanoid:Q9ZUL8
            OMA:ANCANVC PhylomeDB:Q9ZUL8 ProtClustDB:CLSN2913190
            Genevestigator:Q9ZUL8 GermOnline:AT2G02140 Uniprot:Q9ZUL8
        Length = 73

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 20/56 (35%), Positives = 31/56 (55%)

Query:     1 MERSVRLFSTXXXXXXXXASEMGLRAAEARICESQSHRFKGPCVSKSNCAAVCQTE 56
             M+ S+RL S          +  G+   EAR CES S++F+G C++  +CA  C +E
Sbjct:     1 MKLSLRLISALLMSVMLLFAT-GMGPVEARTCESPSNKFQGVCLNSQSCAKACPSE 55


>TAIR|locus:2160569 [details] [associations]
            symbol:PDF2.5 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006952
            "defense response" evidence=IEA;ISS] InterPro:IPR003614
            InterPro:IPR008176 InterPro:IPR008177 Pfam:PF00304 PRINTS:PR00288
            PROSITE:PS00940 SMART:SM00505 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0006952 GO:GO:0050832
            GO:GO:0031640 EMBL:AB005234 HOGENOM:HOG000238637 IPI:IPI00523527
            RefSeq:NP_201171.1 UniGene:At.55692 ProteinModelPortal:Q9FFP8
            SMR:Q9FFP8 PRIDE:Q9FFP8 EnsemblPlants:AT5G63660.1 GeneID:836486
            KEGG:ath:AT5G63660 GeneFarm:4610 TAIR:At5g63660 eggNOG:NOG313837
            InParanoid:Q9FFP8 OMA:HNCAIVC PhylomeDB:Q9FFP8
            ProtClustDB:CLSN2916927 Genevestigator:Q9FFP8 GermOnline:AT5G63660
            Uniprot:Q9FFP8
        Length = 73

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query:    20 SEMGLRAAEARICESQSHRFKGPCVSKSNCAAVCQTE 56
             S   +   E R C+S+SH FK  C S  NCA VC+ E
Sbjct:    17 SSQEIIGGEGRTCQSKSHHFKYMCTSNHNCAIVCRNE 53


>TAIR|locus:1009023182 [details] [associations]
            symbol:LCR73 "low-molecular-weight cysteine-rich 73"
            species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
            region" evidence=ISM] [GO:0006952 "defense response" evidence=IEA]
            InterPro:IPR003614 InterPro:IPR008176 Pfam:PF00304 PROSITE:PS00940
            SMART:SM00505 GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0050832 GO:GO:0031640 EMBL:AC005936 HOGENOM:HOG000238637
            EMBL:AY803261 IPI:IPI00541465 RefSeq:NP_001030952.1
            UniGene:At.63200 ProteinModelPortal:P82782 SMR:P82782
            EnsemblPlants:AT2G02147.1 GeneID:3768036 KEGG:ath:AT2G02147
            GeneFarm:4609 TAIR:At2g02147 eggNOG:NOG282546 OMA:NNCAIIC
            PhylomeDB:P82782 ProtClustDB:CLSN2918685 Genevestigator:P82782
            Uniprot:P82782
        Length = 80

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 18/55 (32%), Positives = 30/55 (54%)

Query:     1 MERSVRLFSTXXXXXXXX-ASEMGLRAAEARICESQSHRFKGPCVSKSNCAAVCQ 54
             M+ S+R  S          A+   +   + +IC+++S RF G C+S +NCA +CQ
Sbjct:     1 MKLSLRFLSVLLLIAFMVLATTAEVSPLDNKICKTRSDRFSGVCISTNNCAIICQ 55


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.124   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       76        52   0.00091  102 3  11 22  0.48    26
                                                     29  0.47    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  433 (46 KB)
  Total size of DFA:  73 KB (2062 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.56u 0.12s 5.68t   Elapsed:  00:00:02
  Total cpu time:  5.56u 0.12s 5.68t   Elapsed:  00:00:02
  Start:  Fri May 10 04:33:35 2013   End:  Fri May 10 04:33:37 2013

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