AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on

Query Sequence

>035000
MAPKPITSPVPDAWYPTLSVFMLAIGLFVTASFFIYEATSSRQNRSLGKELITGAVASVF
LGFGSLFLLLASGVYV

High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT4G29735 AT4G29735 AT4G29735	protein from Arabidopsis thaliana	1.6e-16
BLAST match view associations BLAST with TMEM258 TMEM258 TMEM258 Transmembrane protein 258	protein from Gallus gallus	2.6e-08
BLAST match view associations BLAST with TMEM258 TMEM258 TMEM258 Transmembrane protein 258	protein from Bos taurus	2.6e-08
BLAST match view associations BLAST with TMEM258 TMEM258 TMEM258 Transmembrane protein 258	protein from Homo sapiens	2.6e-08
BLAST match view associations BLAST with Tmem258 Tmem258 Tmem258 transmembrane protein 258	protein from Mus musculus	2.6e-08
BLAST match view associations BLAST with tmem258 tmem258 tmem258 transmembrane protein 258	gene_product from Danio rerio	1.4e-07
BLAST match view associations BLAST with Y57E12AM.1 Y57E12AM.1 Y57E12AM.1	gene from Caenorhabditis elegans	8.1e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035000
        (76 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006534 - symbol:AT4G29735 "AT4G29735" speci...   131  1.6e-16   2
UNIPROTKB|Q76LT9 - symbol:TMEM258 "Transmembrane protein ...   127  2.6e-08   1
UNIPROTKB|Q32P84 - symbol:TMEM258 "Transmembrane protein ...   127  2.6e-08   1
UNIPROTKB|P61165 - symbol:TMEM258 "Transmembrane protein ...   127  2.6e-08   1
MGI|MGI:1916288 - symbol:Tmem258 "transmembrane protein 2...   127  2.6e-08   1
ZFIN|ZDB-GENE-040426-1739 - symbol:tmem258 "transmembrane...   120  1.4e-07   1
WB|WBGene00021960 - symbol:Y57E12AM.1 species:6239 "Caeno...    94  8.1e-05   1


>TAIR|locus:505006534 [details] [associations]
            symbol:AT4G29735 "AT4G29735" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002687 InterPro:IPR007915 PANTHER:PTHR13636
            Pfam:PF05251 IPI:IPI00938767 RefSeq:NP_001154276.1 UniGene:At.31892
            EnsemblPlants:AT4G29735.2 GeneID:829095 KEGG:ath:AT4G29735
            OMA:AIFFIVE Uniprot:F4JNQ9
        Length = 98

 Score = 131 (51.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
 Identities = 27/37 (72%), Positives = 29/37 (78%)

Query:     1 MAPKPITSPVPDAWYPTLSVFMLAIGLFVTASFFIYE 37
             MA KPI SP+P A YPTLSVF LAIGL +TA FFI E
Sbjct:     1 MAAKPIASPIPVALYPTLSVFTLAIGLVITAIFFIVE 37

 Score = 87 (35.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
 Identities = 18/22 (81%), Positives = 20/22 (90%)

Query:    35 IYEATSSRQNRSLGKELITGAV 56
             IYEATSSR+NRS+GKEL T AV
Sbjct:    57 IYEATSSRKNRSVGKELATSAV 78


>UNIPROTKB|Q76LT9 [details] [associations]
            symbol:TMEM258 "Transmembrane protein 258" species:9031
            "Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
            GO:GO:0016021 eggNOG:NOG261845 GeneTree:ENSGT00390000010089
            HOGENOM:HOG000241915 HOVERGEN:HBG050970 OMA:YVSPINP
            OrthoDB:EOG4V6ZJC InterPro:IPR007915 PANTHER:PTHR13636 Pfam:PF05251
            EMBL:AB073598 EMBL:AJ720522 IPI:IPI00574499 RefSeq:NP_001006464.1
            UniGene:Gga.7568 ProteinModelPortal:Q76LT9 STRING:Q76LT9
            Ensembl:ENSGALT00000005753 GeneID:422964 KEGG:gga:422964 CTD:422964
            InParanoid:Q76LT9 NextBio:20825508 Uniprot:Q76LT9
        Length = 79

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query:     7 TSPVPDAWYPTLSVFMLAIGLFVTASFFIYEATSSRQNRSLGKELITGAV 56
             TSPV  A +P L+V +LAIG+F TA FF+YE TS++  R + KEL+   V
Sbjct:    10 TSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLV 59


>UNIPROTKB|Q32P84 [details] [associations]
            symbol:TMEM258 "Transmembrane protein 258" species:9913
            "Bos taurus" [GO:0016021 "integral to membrane" evidence=IEA]
            GO:GO:0016021 EMBL:BC108218 IPI:IPI00824669 RefSeq:NP_001181992.1
            UniGene:Bt.42864 STRING:Q32P84 Ensembl:ENSBTAT00000046195
            GeneID:767958 KEGG:bta:767958 CTD:767958 eggNOG:NOG261845
            GeneTree:ENSGT00390000010089 HOGENOM:HOG000241915
            HOVERGEN:HBG050970 InParanoid:Q32P84 OMA:YVSPINP OrthoDB:EOG4V6ZJC
            NextBio:20918314 InterPro:IPR007915 PANTHER:PTHR13636 Pfam:PF05251
            Uniprot:Q32P84
        Length = 79

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query:     7 TSPVPDAWYPTLSVFMLAIGLFVTASFFIYEATSSRQNRSLGKELITGAV 56
             TSPV  A +P L+V +LAIG+F TA FF+YE TS++  R + KEL+   V
Sbjct:    10 TSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLV 59


>UNIPROTKB|P61165 [details] [associations]
            symbol:TMEM258 "Transmembrane protein 258" species:9606
            "Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
            GO:GO:0016021 EMBL:CH471076 eggNOG:NOG261845 HOGENOM:HOG000241915
            HOVERGEN:HBG050970 OMA:YVSPINP OrthoDB:EOG4V6ZJC InterPro:IPR007915
            PANTHER:PTHR13636 Pfam:PF05251 EMBL:AF086763 EMBL:AF070661
            EMBL:AK291683 EMBL:AP002380 EMBL:BC002750 EMBL:BC015968
            IPI:IPI00003320 RefSeq:NP_055021.1 UniGene:Hs.437779
            ProteinModelPortal:P61165 STRING:P61165 PhosphoSite:P61165
            DMDM:47117653 PRIDE:P61165 Ensembl:ENST00000257262
            Ensembl:ENST00000537328 GeneID:746 KEGG:hsa:746 UCSC:uc001nsf.3
            CTD:746 GeneCards:GC11M061556 HGNC:HGNC:1164 HPA:HPA044602
            neXtProt:NX_P61165 PharmGKB:PA25478 InParanoid:P61165
            PhylomeDB:P61165 ChiTaRS:C11orf10 GenomeRNAi:746 NextBio:3020
            ArrayExpress:P61165 Bgee:P61165 CleanEx:HS_C11orf10
            Genevestigator:P61165 GermOnline:ENSG00000134825 Uniprot:P61165
        Length = 79

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query:     7 TSPVPDAWYPTLSVFMLAIGLFVTASFFIYEATSSRQNRSLGKELITGAV 56
             TSPV  A +P L+V +LAIG+F TA FF+YE TS++  R + KEL+   V
Sbjct:    10 TSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLV 59


>MGI|MGI:1916288 [details] [associations]
            symbol:Tmem258 "transmembrane protein 258" species:10090
            "Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            MGI:MGI:1916288 GO:GO:0016021 eggNOG:NOG261845 HOGENOM:HOG000241915
            HOVERGEN:HBG050970 OMA:YVSPINP OrthoDB:EOG4V6ZJC InterPro:IPR007915
            PANTHER:PTHR13636 Pfam:PF05251 CTD:746 EMBL:AK007351
            IPI:IPI00944183 RefSeq:NP_081195.1 UniGene:Mm.375100
            ProteinModelPortal:P61166 STRING:P61166 PhosphoSite:P61166
            Ensembl:ENSMUST00000040372 GeneID:69038 KEGG:mmu:69038
            InParanoid:P61166 NextBio:328446 Bgee:P61166
            CleanEx:MM_1810006K21RIK Genevestigator:P61166
            GermOnline:ENSMUSG00000036372 Uniprot:P61166
        Length = 79

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query:     7 TSPVPDAWYPTLSVFMLAIGLFVTASFFIYEATSSRQNRSLGKELITGAV 56
             TSPV  A +P L+V +LAIG+F TA FF+YE TS++  R + KEL+   V
Sbjct:    10 TSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLV 59


>ZFIN|ZDB-GENE-040426-1739 [details] [associations]
            symbol:tmem258 "transmembrane protein 258"
            species:7955 "Danio rerio" [GO:0008150 "biological_process"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] ZFIN:ZDB-GENE-040426-1739 GO:GO:0016021
            eggNOG:NOG261845 GeneTree:ENSGT00390000010089 HOGENOM:HOG000241915
            HOVERGEN:HBG050970 OMA:YVSPINP InterPro:IPR007915 PANTHER:PTHR13636
            Pfam:PF05251 EMBL:BC059600 IPI:IPI00491747 RefSeq:NP_957063.1
            UniGene:Dr.1115 STRING:Q6PBS6 PRIDE:Q6PBS6
            Ensembl:ENSDART00000043172 GeneID:393742 KEGG:dre:393742
            OrthoDB:EOG4JWVG5 NextBio:20814743 Bgee:Q6PBS6 Uniprot:Q6PBS6
        Length = 79

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 25/50 (50%), Positives = 34/50 (68%)

Query:     7 TSPVPDAWYPTLSVFMLAIGLFVTASFFIYEATSSRQNRSLGKELITGAV 56
             TSPV  A +P L+V +LAIG+F  A FF+YE TS++  R + KEL+   V
Sbjct:    10 TSPVNPAVFPHLTVVLLAIGMFFKAWFFVYEVTSTKYTRDVYKELLIALV 59


>WB|WBGene00021960 [details] [associations]
            symbol:Y57E12AM.1 species:6239 "Caenorhabditis elegans"
            [GO:0016021 "integral to membrane" evidence=IEA] GO:GO:0016021
            eggNOG:NOG261845 GeneTree:ENSGT00390000010089 HOGENOM:HOG000241915
            OMA:YVSPINP InterPro:IPR007915 PANTHER:PTHR13636 Pfam:PF05251
            EMBL:FO081815 RefSeq:NP_504794.1 STRING:Q965T1
            EnsemblMetazoa:Y57E12AM.1.1 EnsemblMetazoa:Y57E12AM.1.2
            GeneID:179094 KEGG:cel:CELE_Y57E12AM.1 UCSC:Y57E12AM.1.1 CTD:179094
            WormBase:Y57E12AM.1 InParanoid:Q965T1 NextBio:903894 Uniprot:Q965T1
        Length = 79

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 20/49 (40%), Positives = 31/49 (63%)

Query:     7 TSPVPDAWYPTLSVFMLAIGLFVTASFFIYEATSSRQNRSLGKELITGA 55
             T+PV  A  P L+ F+  +GL + A+F + + TS++ NR+L KEL   A
Sbjct:    10 TAPVNFASLPLLTTFLCGVGLLLLATFTMIQVTSTKYNRNLLKELFIAA 58


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       76        58   0.00091  102 3  11 22  0.45    27
                                                     29  0.47    27


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  431 (46 KB)
  Total size of DFA:  72 KB (2061 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.41u 0.18s 7.59t   Elapsed:  00:00:01
  Total cpu time:  7.41u 0.18s 7.59t   Elapsed:  00:00:01
  Start:  Fri May 10 04:34:11 2013   End:  Fri May 10 04:34:12 2013

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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data