BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035006
(76 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04630|SYTM_ARATH Threonine--tRNA ligase, mitochondrial OS=Arabidopsis thaliana
GN=THRRS PE=2 SV=3
Length = 709
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 67/76 (88%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
M+FIK QYW RGY EVI+PNMYNM+LW+TSGHA NYK+NMF +IEKQEFGLKPMNCPGH
Sbjct: 351 MDFIKNQYWHRGYTEVITPNMYNMELWQTSGHADNYKDNMFTFNIEKQEFGLKPMNCPGH 410
Query: 61 CLMFDHKVRSYRVLSL 76
CL+F H+VRSYR L +
Sbjct: 411 CLIFQHRVRSYRELPM 426
>sp|P04801|SYTC_YEAST Threonine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=THS1 PE=1 SV=2
Length = 734
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 61/74 (82%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
++ ++ +Y RGY+EVI+PNMYN KLWETSGH ANYKENMF ++EK+ FGLKPMNCPGH
Sbjct: 364 VDLLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKETFGLKPMNCPGH 423
Query: 61 CLMFDHKVRSYRVL 74
CLMF + RSYR L
Sbjct: 424 CLMFKSRERSYREL 437
>sp|P87144|SYTC_SCHPO Threonine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ths1 PE=3 SV=1
Length = 703
Score = 114 bits (285), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 60/74 (81%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
+++++ QY RGYQEVI+PNMYN+ LW+TSGH NY ENMF DIEK+++ LKPMNCPGH
Sbjct: 325 LKYMRYQYSKRGYQEVITPNMYNVNLWKTSGHWNNYSENMFSFDIEKEKYALKPMNCPGH 384
Query: 61 CLMFDHKVRSYRVL 74
C+MF + RSYR L
Sbjct: 385 CVMFKSRDRSYRDL 398
>sp|Q9D0R2|SYTC_MOUSE Threonine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Tars PE=1
SV=2
Length = 722
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 62/76 (81%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
MEFI+ +Y RG+QEV++PN++N +LW TSGH +Y ENMF ++EK++F LKPMNCPGH
Sbjct: 356 MEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQFALKPMNCPGH 415
Query: 61 CLMFDHKVRSYRVLSL 76
CLMFDH+ RS+R L L
Sbjct: 416 CLMFDHRPRSWRELPL 431
>sp|Q5XHY5|SYTC_RAT Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Tars
PE=2 SV=1
Length = 695
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 62/76 (81%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
MEFI+ +Y RG+QEV++PN++N +LW TSGH +Y ENMF ++EK++F LKPMNCPGH
Sbjct: 329 MEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQFALKPMNCPGH 388
Query: 61 CLMFDHKVRSYRVLSL 76
CLMFDH+ RS+R L L
Sbjct: 389 CLMFDHRPRSWRELPL 404
>sp|P52709|SYTC_CAEEL Threonine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=trs-1 PE=2 SV=1
Length = 725
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 60/76 (78%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
++FI+KQY RG+ EVI+PNMYN KLWETSGH +Y E+MF I++EK+EFGLKPMNCPGH
Sbjct: 356 VDFIRKQYRRRGFTEVITPNMYNKKLWETSGHWQHYSEDMFKIEVEKEEFGLKPMNCPGH 415
Query: 61 CLMFDHKVRSYRVLSL 76
CLMF H +Y L
Sbjct: 416 CLMFGHMPHTYNELPF 431
>sp|Q3ZBV8|SYTC_BOVIN Threonine--tRNA ligase, cytoplasmic OS=Bos taurus GN=TARS PE=2 SV=1
Length = 723
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 61/76 (80%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
+EFI+ +Y RG+QEV++PN+YN +LW TSGH +Y ENMF ++EK+ F LKPMNCPGH
Sbjct: 357 IEFIRSEYRKRGFQEVVTPNIYNSRLWVTSGHWEHYSENMFSFEVEKELFALKPMNCPGH 416
Query: 61 CLMFDHKVRSYRVLSL 76
CLMFDH+ RS+R L L
Sbjct: 417 CLMFDHRPRSWRELPL 432
>sp|P26639|SYTC_HUMAN Threonine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=TARS PE=1
SV=3
Length = 723
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 61/76 (80%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
+EFI+ +Y RG+QEV++PN++N +LW TSGH +Y ENMF ++EK+ F LKPMNCPGH
Sbjct: 357 IEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKELFALKPMNCPGH 416
Query: 61 CLMFDHKVRSYRVLSL 76
CLMFDH+ RS+R L L
Sbjct: 417 CLMFDHRPRSWRELPL 432
>sp|Q8BLY2|SYTC2_MOUSE Probable threonine--tRNA ligase 2, cytoplasmic OS=Mus musculus
GN=Tarsl2 PE=2 SV=1
Length = 790
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 58/76 (76%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
M+FI+++Y R + EV+SPNMYN KLWETSGH +Y NMF D+EK F LKPMNCPGH
Sbjct: 424 MDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTFDVEKDTFALKPMNCPGH 483
Query: 61 CLMFDHKVRSYRVLSL 76
CLMF H+ RS+R + +
Sbjct: 484 CLMFAHRPRSWREMPV 499
>sp|Q8MP20|SYTC2_DICDI Probable threonine--tRNA ligase 2, cytoplasmic OS=Dictyostelium
discoideum GN=thrS2 PE=3 SV=1
Length = 698
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 60/76 (78%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
++F++ +Y RGYQEVISPN+YN KLWETSGH NYK+NMF + + ++ LKPMNCPGH
Sbjct: 317 LQFLRLEYRKRGYQEVISPNIYNQKLWETSGHWDNYKDNMFSFECDHTQYSLKPMNCPGH 376
Query: 61 CLMFDHKVRSYRVLSL 76
CLM+ H+ RSY+ L +
Sbjct: 377 CLMYAHRARSYKELPM 392
>sp|A2RTX5|SYTC2_HUMAN Probable threonine--tRNA ligase 2, cytoplasmic OS=Homo sapiens
GN=TARSL2 PE=1 SV=1
Length = 802
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
+FI+++Y R + EV+SPNMYN KLWE SGH +Y ENMF +IEK F LKPMNCPGHC
Sbjct: 437 DFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDTFALKPMNCPGHC 496
Query: 62 LMFDHKVRSYRVLSL 76
LMF H+ RS+R + +
Sbjct: 497 LMFAHRPRSWREMPI 511
>sp|A6QNM8|SYTC2_BOVIN Probable threonine--tRNA ligase 2, cytoplasmic OS=Bos taurus
GN=TARSL2 PE=2 SV=1
Length = 724
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
++FI++Q+ R + EV+SPNMY+ KLWE SGH +Y ENMF DI+K F LKPMNCPGH
Sbjct: 434 IDFIREQHHQRNFTEVLSPNMYSCKLWEASGHWQHYSENMFTFDIDKDTFALKPMNCPGH 493
Query: 61 CLMFDHKVRSYRVLSL 76
CLMF H+ RS+R + +
Sbjct: 494 CLMFAHRPRSWREMPI 509
>sp|Q0V9S0|SYTC2_XENTR Probable threonine--tRNA ligase 2, cytoplasmic OS=Xenopus
tropicalis GN=tarsl2 PE=2 SV=1
Length = 814
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 56/76 (73%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
+FIK +Y R + EV SPN+YN KLWE SGH +Y ENMF ++EK+ F LKPMNCPGH
Sbjct: 448 TDFIKGEYQIRNFTEVASPNIYNSKLWEMSGHWQHYSENMFSFEVEKETFALKPMNCPGH 507
Query: 61 CLMFDHKVRSYRVLSL 76
CLMF H+ RS+R L L
Sbjct: 508 CLMFGHRPRSWRELPL 523
>sp|Q54J66|SYTC1_DICDI Probable threonine--tRNA ligase 1, cytoplasmic OS=Dictyostelium
discoideum GN=thrS1 PE=3 SV=1
Length = 710
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
+EFI+++Y RG+ EVISP++++ KLWE SGH Y ENMF++ ++K F LKPMNCPGH
Sbjct: 351 VEFIREEYHRRGFTEVISPSIFSQKLWEQSGHWQKYSENMFVLPVDKDNFSLKPMNCPGH 410
Query: 61 CLMFDHKVRSYRVLSL 76
CLMF + RSYR L L
Sbjct: 411 CLMFGSRQRSYRELPL 426
>sp|Q8SRH2|SYTC_ENCCU Probable threonine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU07_1570 PE=3 SV=1
Length = 640
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
+EF++++Y RG++EVI+PN++ +LWE SGH NYKENMF+ IE F LKPMNCPGH
Sbjct: 276 IEFLREEYRKRGFKEVITPNIFCTQLWEESGHLQNYKENMFI--IEGDTFALKPMNCPGH 333
Query: 61 CLMFDHKVRSYRVLSL 76
C+MF H+ S+R L L
Sbjct: 334 CVMFRHQDHSFRDLPL 349
>sp|B7XIA1|SYTC_ENTBH Probable threonine--tRNA ligase, cytoplasmic OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_22768 PE=3 SV=1
Length = 634
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
Query: 1 MEFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGH 60
MEF++K+Y RG++EVI+PN++++ LW+ SGH NYKEN++ I ++F LKPMNCPGH
Sbjct: 273 MEFLRKEYIKRGFKEVITPNIFHIDLWKESGHYQNYKENIY--GISGEDFALKPMNCPGH 330
Query: 61 CLMFDHKVRSYRVLSL 76
C++F RSY+ L L
Sbjct: 331 CIIFKSVERSYKELPL 346
>sp|Q0KBZ3|SYT_CUPNH Threonine--tRNA ligase OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=thrS PE=3 SV=1
Length = 635
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 54/75 (72%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++ + D GY EV +P + + LWE SGH NYKENMF+ + EK+++ +KPMNCPGH
Sbjct: 278 QYMRGRLTDAGYDEVRTPQVMDRSLWEKSGHWQNYKENMFVTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F+H +RSYR L L
Sbjct: 338 QIFNHGLRSYRDLPL 352
>sp|A4G619|SYT_HERAR Threonine--tRNA ligase OS=Herminiimonas arsenicoxydans GN=thrS PE=3
SV=1
Length = 635
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 51/75 (68%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
+++++ Y D GYQEV +P + + LWE SGH NYKENMF + E + + LKPMNCPGH
Sbjct: 278 QYMRRVYQDNGYQEVKAPQILDRSLWEKSGHWENYKENMFTTESENRSYALKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F +RSYR L L
Sbjct: 338 QIFASDLRSYRELPL 352
>sp|B3R4J1|SYT_CUPTR Threonine--tRNA ligase OS=Cupriavidus taiwanensis (strain R1 / LMG
19424) GN=thrS PE=3 SV=1
Length = 635
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 54/75 (72%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++ + D GY EV +P + + LWE SGH NYKENMF+ + EK+++ +KPMNCPGH
Sbjct: 278 QYMRGRLTDAGYDEVRTPQVMDRSLWEKSGHWQNYKENMFVTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F+H +RSYR L L
Sbjct: 338 QIFNHGLRSYRDLPL 352
>sp|Q12BR3|SYT_POLSJ Threonine--tRNA ligase OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=thrS PE=3 SV=1
Length = 635
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 52/75 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++K Y D GYQEV P + + LWE +GH Y++NMF + EK+E+ LKPMNCPGH
Sbjct: 278 QYMRKVYQDNGYQEVKGPQVIDKTLWEKTGHWDKYRDNMFTTESEKREYALKPMNCPGHI 337
Query: 62 LMFDHKVRSYRVLSL 76
L+F ++SYR L L
Sbjct: 338 LIFKQGIKSYRDLPL 352
>sp|A9C3D4|SYT_DELAS Threonine--tRNA ligase OS=Delftia acidovorans (strain DSM 14801 /
SPH-1) GN=thrS PE=3 SV=1
Length = 643
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
+++++ Y D GYQEV P + + LWE +GH Y+ENMF + EK+++ LKPMNCPGH
Sbjct: 282 QYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRENMFTTESEKRDYALKPMNCPGHI 341
Query: 62 LMFDHKVRSYRVLSL 76
L+F ++SYR L L
Sbjct: 342 LIFKQGIKSYRDLPL 356
>sp|A1VR77|SYT_POLNA Threonine--tRNA ligase OS=Polaromonas naphthalenivorans (strain
CJ2) GN=thrS PE=3 SV=1
Length = 635
Score = 90.1 bits (222), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++K Y + GYQEV P + + LWE +GH Y++NMF + EK++F LKPMNCPGH
Sbjct: 278 QYMRKVYQNNGYQEVKGPQLLDKTLWEKTGHWDKYRDNMFTTESEKRDFALKPMNCPGHI 337
Query: 62 LMFDHKVRSYRVLSL 76
L+F ++SYR L L
Sbjct: 338 LIFKQGIKSYRDLPL 352
>sp|A1WMG5|SYT_VEREI Threonine--tRNA ligase OS=Verminephrobacter eiseniae (strain
EF01-2) GN=thrS PE=3 SV=1
Length = 639
Score = 89.7 bits (221), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
+++++ Y D GYQEV P + + LWE +GH Y+ENMF+ + EK+++ LKPMNCPGH
Sbjct: 278 QYMRRVYRDNGYQEVKGPQILDQGLWEKTGHWDKYRENMFVTESEKRDYALKPMNCPGHI 337
Query: 62 LMFDHKVRSYRVLSL 76
++F ++SYR L L
Sbjct: 338 IIFKQGIKSYRDLPL 352
>sp|A1TR39|SYT_ACIAC Threonine--tRNA ligase OS=Acidovorax citrulli (strain AAC00-1)
GN=thrS PE=3 SV=1
Length = 639
Score = 89.7 bits (221), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 52/75 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
+++++ Y D GYQEV P + + LWE +GH Y+ENMF + EK ++ LKPMNCPGH
Sbjct: 278 QYMRQVYRDNGYQEVKGPQILDKHLWEKTGHWDKYRENMFTTESEKHDYALKPMNCPGHI 337
Query: 62 LMFDHKVRSYRVLSL 76
L+F+ V+SYR L L
Sbjct: 338 LIFNQGVKSYRDLPL 352
>sp|Q7NYC6|SYT_CHRVO Threonine--tRNA ligase OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=thrS PE=3 SV=1
Length = 633
Score = 89.4 bits (220), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 55/75 (73%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++ + GY+EV +P M + LWE SGHAANY+ENMF+ + EK+++ +KPMNCPGH
Sbjct: 278 QYMRAKLNHEGYKEVRTPMMMDANLWERSGHAANYRENMFITESEKRDYAVKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F+ +RSYR L L
Sbjct: 338 QIFNSGLRSYRDLPL 352
>sp|B1XYZ3|SYT_LEPCP Threonine--tRNA ligase OS=Leptothrix cholodnii (strain ATCC 51168 /
LMG 8142 / SP-6) GN=thrS PE=3 SV=1
Length = 637
Score = 89.4 bits (220), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
+++++ Y D GYQEV P + + LWE +GH Y++NMF + EK+++ LKPMNCPGH
Sbjct: 282 QYMRRVYRDNGYQEVKGPQILDKGLWEKTGHWDKYRDNMFTTESEKRDYALKPMNCPGHI 341
Query: 62 LMFDHKVRSYRVLSL 76
L+F ++SYR L L
Sbjct: 342 LIFKQGIKSYRDLPL 356
>sp|B2UGJ8|SYT_RALPJ Threonine--tRNA ligase OS=Ralstonia pickettii (strain 12J) GN=thrS
PE=3 SV=1
Length = 635
Score = 89.4 bits (220), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
+++++ Y + GYQEV P + + LWE +GH Y+ENMF+ + EK+E+ LKPMNCPGH
Sbjct: 278 QYMRRVYRENGYQEVKGPQILDKTLWEKTGHWDKYRENMFITESEKREYALKPMNCPGHI 337
Query: 62 LMFDHKVRSYRVLSL 76
L++ ++SYR L L
Sbjct: 338 LIYKQGIKSYRDLPL 352
>sp|Q7VY64|SYT_BORPE Threonine--tRNA ligase OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=thrS PE=3 SV=1
Length = 649
Score = 89.0 bits (219), Expect = 8e-18, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++K Y D GYQEV +P + ++ LW+ +GH NY+ENMF + E + +GLKPMNCPGH
Sbjct: 283 QYMRKVYQDNGYQEVKAPQILDLTLWKKTGHWDNYRENMFTTESENRVYGLKPMNCPGHV 342
Query: 62 LMFDHKVRSYRVLSL 76
+F+ + SYR L L
Sbjct: 343 QIFNAGLHSYRELPL 357
>sp|Q7W912|SYT_BORPA Threonine--tRNA ligase OS=Bordetella parapertussis (strain 12822 /
ATCC BAA-587 / NCTC 13253) GN=thrS PE=3 SV=1
Length = 649
Score = 89.0 bits (219), Expect = 8e-18, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++K Y D GYQEV +P + ++ LW+ +GH NY+ENMF + E + +GLKPMNCPGH
Sbjct: 283 QYMRKVYQDNGYQEVKAPQILDLTLWKKTGHWDNYRENMFTTESENRVYGLKPMNCPGHV 342
Query: 62 LMFDHKVRSYRVLSL 76
+F+ + SYR L L
Sbjct: 343 QIFNAGLHSYRELPL 357
>sp|Q7WKF7|SYT_BORBR Threonine--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=thrS PE=3 SV=1
Length = 649
Score = 89.0 bits (219), Expect = 8e-18, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++K Y D GYQEV +P + ++ LW+ +GH NY+ENMF + E + +GLKPMNCPGH
Sbjct: 283 QYMRKVYQDNGYQEVKAPQILDLTLWKKTGHWDNYRENMFTTESENRVYGLKPMNCPGHV 342
Query: 62 LMFDHKVRSYRVLSL 76
+F+ + SYR L L
Sbjct: 343 QIFNAGLHSYRELPL 357
>sp|Q8XZ29|SYT_RALSO Threonine--tRNA ligase OS=Ralstonia solanacearum (strain GMI1000)
GN=thrS PE=3 SV=1
Length = 635
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++ + GY EV +P + + LWE SGH NYKENMF+ + EK+E+ +KPMNCPGH
Sbjct: 278 QYMRGRLAGAGYSEVRTPQVMDRGLWERSGHWENYKENMFVTESEKREYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F+H +RSYR L L
Sbjct: 338 QIFNHGLRSYRDLPL 352
>sp|Q1QWK7|SYT_CHRSD Threonine--tRNA ligase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=thrS PE=3 SV=1
Length = 632
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++ Y D GYQE+ P + ++ LW+ SGH NY ENMF + EK+E+ LKPMNCPGH
Sbjct: 278 QYMRGVYKDSGYQEIRCPQIMDVSLWQKSGHWDNYAENMFFTESEKREYALKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVL 74
+F+ +RSYR L
Sbjct: 338 QVFNSGLRSYREL 350
>sp|A1W8I6|SYT_ACISJ Threonine--tRNA ligase OS=Acidovorax sp. (strain JS42) GN=thrS PE=3
SV=1
Length = 639
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
+++++ Y D GYQEV P + + LWE +GH Y++NMF + EK+++ LKPMNCPGH
Sbjct: 278 QYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRDNMFTTESEKRDYALKPMNCPGHI 337
Query: 62 LMFDHKVRSYRVLSL 76
L+F ++SYR L L
Sbjct: 338 LIFKQGIKSYRDLPL 352
>sp|B9MHX8|SYT_ACIET Threonine--tRNA ligase OS=Acidovorax ebreus (strain TPSY) GN=thrS
PE=3 SV=1
Length = 639
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
+++++ Y D GYQEV P + + LWE +GH Y++NMF + EK+++ LKPMNCPGH
Sbjct: 278 QYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRDNMFTTESEKRDYALKPMNCPGHI 337
Query: 62 LMFDHKVRSYRVLSL 76
L+F ++SYR L L
Sbjct: 338 LIFKQGIKSYRDLPL 352
>sp|Q13WF7|SYT_BURXL Threonine--tRNA ligase OS=Burkholderia xenovorans (strain LB400)
GN=thrS PE=3 SV=1
Length = 635
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 54/75 (72%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++++ D GY E+ +P + + LWE SGH NY+ENMF + EK+++ +KPMNCPGH
Sbjct: 278 QYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F+H +RSYR L L
Sbjct: 338 QVFNHGLRSYRDLPL 352
>sp|B2SZG2|SYT_BURPP Threonine--tRNA ligase OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=thrS PE=3 SV=1
Length = 635
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 54/75 (72%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++++ D GY E+ +P + + LWE SGH NY+ENMF + EK+++ +KPMNCPGH
Sbjct: 278 QYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F+H +RSYR L L
Sbjct: 338 QVFNHGLRSYRDLPL 352
>sp|Q472N7|SYT_CUPPJ Threonine--tRNA ligase OS=Cupriavidus pinatubonensis (strain JMP134
/ LMG 1197) GN=thrS PE=3 SV=1
Length = 635
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++ + GY EV +P + + LWE SGH NYKENMF+ + EK+++ +KPMNCPGH
Sbjct: 278 QYMRGRLTAAGYDEVRTPQVMDRSLWEKSGHWQNYKENMFVTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F+H +RSYR L L
Sbjct: 338 QIFNHGLRSYRDLPL 352
>sp|C5CUU2|SYT_VARPS Threonine--tRNA ligase OS=Variovorax paradoxus (strain S110)
GN=thrS PE=3 SV=1
Length = 635
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 51/75 (68%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++ Y D GY EV P + + LWE +GH NY++NMF + EK+E+ LKPMNCPGH
Sbjct: 278 QYMRGIYRDTGYWEVKGPQILDKSLWEKTGHWQNYRDNMFTTESEKREYALKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
L+F +RSYR L L
Sbjct: 338 LIFKSDLRSYRDLPL 352
>sp|A4JDU4|SYT_BURVG Threonine--tRNA ligase OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=thrS PE=3 SV=1
Length = 635
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++++ D GY E+ +P + + LWE SGH NY+ENMF + EK+++ +KPMNCPGH
Sbjct: 278 QYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F H +RSYR L L
Sbjct: 338 QVFKHGLRSYRDLPL 352
>sp|Q0BG06|SYT_BURCM Threonine--tRNA ligase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=thrS PE=3 SV=1
Length = 635
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++++ D GY E+ +P + + LWE SGH NY+ENMF + EK+++ +KPMNCPGH
Sbjct: 278 QYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F H +RSYR L L
Sbjct: 338 QVFKHGLRSYRDLPL 352
>sp|B1YP13|SYT_BURA4 Threonine--tRNA ligase OS=Burkholderia ambifaria (strain MC40-6)
GN=thrS PE=3 SV=1
Length = 635
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++++ D GY E+ +P + + LWE SGH NY+ENMF + EK+++ +KPMNCPGH
Sbjct: 278 QYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F H +RSYR L L
Sbjct: 338 QVFKHGLRSYRDLPL 352
>sp|Q6MML0|SYT_BDEBA Threonine--tRNA ligase OS=Bdellovibrio bacteriovorus (strain ATCC
15356 / DSM 50701 / NCIB 9529 / HD100) GN=thrS PE=3 SV=1
Length = 656
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 56/74 (75%)
Query: 3 FIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHCL 62
++++ Y++ GYQEVI+P ++++ L+ TSGH NYKENMF +++++F KPMNCP HCL
Sbjct: 288 YLRELYFETGYQEVITPQIFDVNLFHTSGHYQNYKENMFFTKVDERDFASKPMNCPSHCL 347
Query: 63 MFDHKVRSYRVLSL 76
+++ + SYR L +
Sbjct: 348 LYNSEKYSYRDLPI 361
>sp|A6SY30|SYT_JANMA Threonine--tRNA ligase OS=Janthinobacterium sp. (strain Marseille)
GN=thrS PE=3 SV=1
Length = 635
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++K Y D YQEV +P + + LWE +GH NY+ENMF+ + E + + LKPMNCPGH
Sbjct: 278 QYMRKVYQDNDYQEVKAPQILDRGLWEKTGHWDNYRENMFVTESENRSYALKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+++ +RSYR L L
Sbjct: 338 QIYNSDMRSYRDLPL 352
>sp|Q2L2M5|SYT_BORA1 Threonine--tRNA ligase OS=Bordetella avium (strain 197N) GN=thrS
PE=3 SV=1
Length = 650
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++ Y D GYQEV +P + ++ LW+ +GH NY+ENMF + E + +GLKPMNCPGH
Sbjct: 283 QYMRAVYRDNGYQEVKAPQILDLSLWKKTGHWDNYRENMFTTESENRVYGLKPMNCPGHV 342
Query: 62 LMFDHKVRSYRVLSL 76
+F+ + SYR L L
Sbjct: 343 QIFNAGLHSYRELPL 357
>sp|A9IRH6|SYT_BORPD Threonine--tRNA ligase OS=Bordetella petrii (strain ATCC BAA-461 /
DSM 12804 / CCUG 43448) GN=thrS PE=3 SV=1
Length = 650
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++ Y D GYQEV +P + ++ LW+ +GH NY+ENMF + E + +GLKPMNCPGH
Sbjct: 283 QYMRAVYNDNGYQEVKAPQILDLSLWKKTGHWDNYRENMFTTESENRVYGLKPMNCPGHV 342
Query: 62 LMFDHKVRSYRVLSL 76
+F+ + SYR L L
Sbjct: 343 QIFNAGLHSYRELPL 357
>sp|B3PL16|SYT_CELJU Threonine--tRNA ligase OS=Cellvibrio japonicus (strain Ueda107)
GN=thrS PE=3 SV=1
Length = 642
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 54/75 (72%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++ + D GYQEV +P + + LWE SGH NY+ENMF + EK++F +KPMNCPGH
Sbjct: 279 QYMRAKQNDWGYQEVRTPLIMDRVLWEKSGHWENYRENMFTTESEKRDFAVKPMNCPGHV 338
Query: 62 LMFDHKVRSYRVLSL 76
+F+H +RS++ L L
Sbjct: 339 QIFNHGLRSHKDLPL 353
>sp|Q39H55|SYT_BURS3 Threonine--tRNA ligase OS=Burkholderia sp. (strain 383) GN=thrS
PE=3 SV=1
Length = 635
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++++ + GY E+ +P + + LWE SGH NY+ENMF + EK+++ +KPMNCPGH
Sbjct: 278 QYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F H +RSYR L L
Sbjct: 338 QVFKHGLRSYRDLPL 352
>sp|B1K091|SYT_BURCC Threonine--tRNA ligase OS=Burkholderia cenocepacia (strain MC0-3)
GN=thrS PE=3 SV=1
Length = 635
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++++ + GY E+ +P + + LWE SGH NY+ENMF + EK+++ +KPMNCPGH
Sbjct: 278 QYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F H +RSYR L L
Sbjct: 338 QVFKHGLRSYRDLPL 352
>sp|B4E7I6|SYT_BURCJ Threonine--tRNA ligase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=thrS PE=3 SV=1
Length = 635
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++++ + GY E+ +P + + LWE SGH NY+ENMF + EK+++ +KPMNCPGH
Sbjct: 278 QYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F H +RSYR L L
Sbjct: 338 QVFKHGLRSYRDLPL 352
>sp|B2JJJ7|SYT_BURP8 Threonine--tRNA ligase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=thrS PE=3 SV=1
Length = 635
Score = 85.5 bits (210), Expect = 8e-17, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 54/75 (72%)
Query: 2 EFIKKQYWDRGYQEVISPNMYNMKLWETSGHAANYKENMFLIDIEKQEFGLKPMNCPGHC 61
++++++ + GY E+ +P + + LWE SGH NY++NMF + EK+++ +KPMNCPGH
Sbjct: 278 QYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRDNMFTTESEKRDYAIKPMNCPGHV 337
Query: 62 LMFDHKVRSYRVLSL 76
+F+H +RSYR L L
Sbjct: 338 QVFNHGLRSYRDLPL 352
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,747,700
Number of Sequences: 539616
Number of extensions: 952531
Number of successful extensions: 3281
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 2319
Number of HSP's gapped (non-prelim): 753
length of query: 76
length of database: 191,569,459
effective HSP length: 47
effective length of query: 29
effective length of database: 166,207,507
effective search space: 4820017703
effective search space used: 4820017703
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)