BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035011
(76 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SUI0|RC24_ARATH UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana
GN=At4g30660 PE=2 SV=1
Length = 74
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 65/73 (89%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDR 60
MPS CEI CEI+IAILLPPLGVC + GCCTVEF ICL+LTILGYVPGIIYA+Y IVF R
Sbjct: 1 MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60
Query: 61 DEYFDEYRRPLYA 73
+EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73
>sp|O82232|RC22_ARATH UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana
GN=At2g24040 PE=3 SV=1
Length = 75
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 65/72 (90%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDR 60
M S CE+CCEI IAILLPP+GVCL+HGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1 MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60
Query: 61 DEYFDEYRRPLY 72
DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72
>sp|Q9M095|RC23_ARATH UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana
GN=At4g30650 PE=3 SV=1
Length = 73
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDR 60
M S E+ CEILIAILLPPLGVCLK GCCTVEF ICL+LTILGY+PGIIYALY IVF +R
Sbjct: 1 MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60
Query: 61 DEYFDEYRRPLYA 73
E E PL +
Sbjct: 61 -EGSTELGAPLNS 72
>sp|Q9LRI7|OSR8_ORYSJ Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8
PE=3 SV=1
Length = 72
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 51/59 (86%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYR 68
EIL+AI+LPPLGV L+ GCC++EFCICLLLTILGYVPGIIYA+Y +V +D D+Y EY
Sbjct: 11 EILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQYQREYH 69
>sp|Q0DKW8|LTI6B_ORYSJ Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica
GN=LTI6B PE=2 SV=1
Length = 55
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 8 CCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
C +ILIAI+LPPLGV LK GC EF ICLLLT LGY+PGIIYA+YAI
Sbjct: 7 CIDILIAIILPPLGVFLKFGCGH-EFWICLLLTFLGYIPGIIYAIYAIT 54
>sp|A2Y075|LTI6B_ORYSI Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B
PE=3 SV=2
Length = 55
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 8 CCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
C +ILIAI+LPPLGV LK GC EF ICLLLT LGY+PGIIYA+YAI
Sbjct: 7 CIDILIAIILPPLGVFLKFGCGH-EFWICLLLTFLGYIPGIIYAIYAIT 54
>sp|Q9ZNS6|RCI2B_ARATH Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2
SV=1
Length = 54
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
EI++AI+LPPLGV LK GC VEF ICL+LT+ GY+PGI+YALY I
Sbjct: 8 EIILAIILPPLGVFLKFGC-KVEFWICLILTLFGYLPGILYALYII 52
>sp|Q8H5T6|LTI6A_ORYSJ Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica
GN=LTI6A PE=2 SV=1
Length = 56
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
M C +I++AI+LPPLGV K GC +EF ICLLLT GY+PGIIYA++ I
Sbjct: 1 MADSTATCIDIILAIILPPLGVFFKFGC-GIEFWICLLLTFFGYLPGIIYAVWVI 54
>sp|Q9ZNQ7|RCI2A_ARATH Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2
SV=1
Length = 54
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
+I+IAILLPPLGV L+ GC VEF ICL+LT+LGY+PGIIYA+Y +
Sbjct: 8 DIIIAILLPPLGVFLRFGC-GVEFWICLVLTLLGYIPGIIYAIYVL 52
>sp|Q9ARD5|LT02_HORVU Low temperature-induced protein lt101.2 OS=Hordeum vulgare
GN=LT101.2 PE=2 SV=1
Length = 54
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
E+++AI+LPP+GV L++G VEF ICLLLT+LGY+PGIIYA+Y +V
Sbjct: 8 EVILAIILPPVGVFLRYGLA-VEFWICLLLTLLGYIPGIIYAVYVLV 53
>sp|Q4HXT6|PMP3_GIBZE Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3
SV=2
Length = 57
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
MP C+I++AI+LPP+GV L+ GC +F I +LLTILGY+PGII+ALY I+
Sbjct: 1 MPFTASDICKIILAIILPPVGVFLERGCGA-DFFINILLTILGYIPGIIHALYIIL 55
>sp|P68179|LT01_HORVU Low temperature-induced protein lt101.1 OS=Hordeum vulgare
GN=LT101.1 PE=2 SV=1
Length = 54
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 8 CCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
E+++AI+LPP+GV L++ VEF ICLLLTILGY+PGIIYA+Y +V
Sbjct: 6 VLEVILAIILPPVGVFLRYKL-GVEFWICLLLTILGYIPGIIYAVYVLV 53
>sp|P68178|ESI3_LOPEL Salt stress-induced hydrophobic peptide ESI3 OS=Lophopyrum
elongatum GN=ESI3 PE=2 SV=1
Length = 54
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 8 CCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
E+++AI+LPP+GV L++ VEF ICLLLTILGY+PGIIYA+Y +V
Sbjct: 6 VLEVILAIILPPVGVFLRYKL-GVEFWICLLLTILGYIPGIIYAVYVLV 53
>sp|Q871V2|PMP3_NEUCR Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pmp-3 PE=3 SV=1
Length = 57
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
M C+I++A++LPPLGV + GC + I +LLTILGY+PGI++ALY I+
Sbjct: 1 MAFTASDICKIIVAVILPPLGVFFERGCGA-DLFINILLTILGYLPGIVHALYIIL 55
>sp|Q4WYA5|PMP3_ASPFU Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=pmp3 PE=3 SV=1
Length = 57
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
MP C+IL AI+LPPLGV L+ G C + I + LTILG++PGII+A Y I
Sbjct: 1 MPFTASDICKILFAIILPPLGVFLERG-CGADLLINICLTILGWIPGIIHAFYII 54
>sp|Q22701|YCU4_CAEEL UPF0057 membrane protein T23F2.4 OS=Caenorhabditis elegans
GN=T23F2.4 PE=3 SV=2
Length = 57
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
+ L A+LLPP+GV L+ GC T IC+LLTILGY+PGIIYA Y I+
Sbjct: 10 KFLFALLLPPVGVFLEKGC-THHLAICILLTILGYIPGIIYACYIIL 55
>sp|Q6BVN0|PMP3_DEBHA Plasma membrane proteolipid 3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PMP3 PE=3 SV=1
Length = 57
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 17 LPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
LPPLGV L+ GC + F I ++LTILGY+PGII+ALY I+
Sbjct: 17 LPPLGVFLERGCAS-SFWINIVLTILGYIPGIIHALYVIL 55
>sp|Q22700|YCU3_CAEEL UPF0057 membrane protein T23F2.3 OS=Caenorhabditis elegans
GN=T23F2.3 PE=3 SV=1
Length = 57
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 14 AILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
A+LLPP+GV L+ GC IC+LLTILGY+PGIIYA Y I+
Sbjct: 14 AVLLPPIGVFLEKGC-DYHLAICILLTILGYIPGIIYACYVIL 55
>sp|Q9FE70|RC21_ARATH UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana
GN=At1g57550 PE=2 SV=1
Length = 52
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
E+L AI +PP+GV L++G +EF +CLLLT+ ++PG+IYA+Y +
Sbjct: 6 EVLCAIFIPPVGVFLRYGL-GLEFWVCLLLTLFAFIPGLIYAIYVL 50
>sp|Q22702|YCU5_CAEEL UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans
GN=T23F2.5 PE=3 SV=1
Length = 57
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
M C + L A+LLPP+GV L+ GC T I +LLTILGY+PGII+A Y I+
Sbjct: 1 MALTCTDIPKFLCALLLPPIGVWLEKGC-TYHLAINILLTILGYIPGIIHACYVIL 55
>sp|P0AE42|YQAE_ECOLI UPF0057 membrane protein YqaE OS=Escherichia coli (strain K12)
GN=yqaE PE=3 SV=1
Length = 52
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 9 CEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALY 53
I+I I+LPPLGV L G F I +LLT+LGY+PG+I+A +
Sbjct: 4 WRIVITIILPPLGVLLGKGFGW-AFIINILLTLLGYIPGLIHAFW 47
>sp|P0AE43|YQAE_ECOL6 UPF0057 membrane protein YqaE OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=yqaE PE=3 SV=1
Length = 52
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 9 CEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALY 53
I+I I+LPPLGV L G F I +LLT+LGY+PG+I+A +
Sbjct: 4 WRIVITIILPPLGVLLGKGFGW-AFIINILLTLLGYIPGLIHAFW 47
>sp|P0AE44|YQAE_ECO57 UPF0057 membrane protein YqaE OS=Escherichia coli O157:H7 GN=yqaE
PE=3 SV=1
Length = 52
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 9 CEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALY 53
I+I I+LPPLGV L G F I +LLT+LGY+PG+I+A +
Sbjct: 4 WRIVITIILPPLGVLLGKGFGW-AFIINILLTLLGYIPGLIHAFW 47
>sp|Q9C1W4|PMP3_SCHPO Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2
Length = 57
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
+++ AI+LPPLGV L+ GC + I +LL LGYVPGII+ALY I+
Sbjct: 10 KVIFAIILPPLGVFLERGCGA-DVIINILLCCLGYVPGIIHALYIIL 55
>sp|Q9Y068|RIC1_PHYIN Protein Ric1 OS=Phytophthora infestans GN=RIC1 PE=3 SV=1
Length = 57
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
MP C ++ ++++PP+GV + GC T + I LLT+LGY+PG+I+A+Y ++
Sbjct: 1 MPITCGDIPRLICSVIIPPVGVFFQVGC-TKDLAINCLLTVLGYIPGVIHAVYILI 55
>sp|P0CS18|PMP3_CRYNJ Plasma membrane proteolipid 3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PMP3 PE=3 SV=1
Length = 57
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
M C +I++AI+LPPLGV L+ GC + I +LLTILGY+PGII+ALY I+
Sbjct: 1 MAFTCSDIFKIILAIILPPLGVFLERGCGA-DLLINILLTILGYIPGIIHALYIIL 55
>sp|P0CS19|PMP3_CRYNB Plasma membrane proteolipid 3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PMP3 PE=3
SV=1
Length = 57
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
M C +I++AI+LPPLGV L+ GC + I +LLTILGY+PGII+ALY I+
Sbjct: 1 MAFTCSDIFKIILAIILPPLGVFLERGCGA-DLLINILLTILGYIPGIIHALYIIL 55
>sp|P34655|YOT0_CAEEL UPF0057 membrane protein ZK632.10 OS=Caenorhabditis elegans
GN=ZK632.10 PE=3 SV=2
Length = 80
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 9 CEILIAIL---LPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFD 65
C+IL+AIL LPP+ V L GC + I +LLT LG +PGII+A Y I+ ++ +
Sbjct: 2 CQILLAILAIFLPPIAVLLDVGC-NCDLLINILLTCLGIIPGIIHAWYIILCKEKTVVQN 60
Query: 66 EYRR--------PLYAP 74
Y + P Y+P
Sbjct: 61 IYVQTNDHGTAPPAYSP 77
>sp|Q9I5W9|Y567_PSEAE UPF0057 membrane protein PA0567 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0567
PE=3 SV=1
Length = 52
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 18 PPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
PPLGV L+ G F + +LLT+LGY+PGI++A+Y I
Sbjct: 13 PPLGVFLQVGFGG-AFWLNILLTLLGYIPGIVHAVYII 49
>sp|P74805|Y1169_SYNY3 UPF0057 membrane protein ssr1169 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=ssr1169 PE=3 SV=2
Length = 54
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 9 CEILIAILLPPLGVCLKHGCCTVEFCICLLLTILG-YVPGIIYALYAI 55
+I+ AILLPPLGV L+ G +F I LLLTI G Y+ G+++A++ I
Sbjct: 4 VKIICAILLPPLGVFLQVGIGK-DFWINLLLTIFGLYILGLVHAIWVI 50
>sp|Q75C38|PMP3_ASHGO Plasma membrane proteolipid 3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PMP3
PE=3 SV=1
Length = 55
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 8 CCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
++IAI LPP+ V L G VE + LLLTI + PG++YALY +
Sbjct: 6 VVNVIIAIFLPPVAVFLARGWG-VECIVDLLLTIFFFFPGMLYALYIV 52
>sp|Q07549|SNA4_YEAST Protein SNA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SNA4 PE=1 SV=1
Length = 140
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 4 CCEICCEIL--IAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVD 59
CC + IL +A PP V L+ G C+ +F + +LLT+LG++PG+++A Y I
Sbjct: 7 CCTVSDFILYIVAFFFPPAAVLLRSGPCSSDFLLNVLLTLLGFLPGMLHAFYYITITS 64
>sp|P87284|PMP3_YEAST Plasma membrane proteolipid 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PMP3 PE=1 SV=1
Length = 55
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
I++++ LPP+ V L G T + + ++LTIL + PG++YALY ++
Sbjct: 8 NIILSLFLPPVAVFLARGWGT-DCIVDIILTILAWFPGMLYALYIVL 53
>sp|Q17638|YAM5_CAEEL UPF0057 membrane protein C04G6.5 OS=Caenorhabditis elegans
GN=C04G6.5 PE=3 SV=1
Length = 59
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALY 53
M + ++ E+++ I LPPL + C + I ++ +L ++PGI+YA+Y
Sbjct: 1 MATDADVIIEVILCIFLPPLAIWWHTKECDINVLIDIIFCLLFWLPGILYAVY 53
>sp|Q9P824|PMP3_CANAX Plasma membrane proteolipid 3 homolog OS=Candida albicans GN=PMP3
PE=3 SV=1
Length = 55
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 5 CEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
E E++IAI LPP+ V +K G T I L+L I + P I++ALY ++
Sbjct: 3 SEKIIEVIIAIFLPPVAVFMKCGATT-PLWINLVLCIFIWFPAILHALYVVL 53
>sp|O74837|PMP31_SCHPO Plasma membrane proteolipid 31 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pmp31 PE=1 SV=2
Length = 109
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 11 ILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRP 70
I+++ +P + V ++ G CT +F I + L LG +PGII+A+Y ++ R D P
Sbjct: 12 IVLSFFVPFIVVGIRRGFCTADFLINICLCALG-IPGIIHAIYIVIKYPRTVRLDIENSP 70
Query: 71 -----LYAPGP 76
Y P P
Sbjct: 71 NDPLVRYTPNP 81
>sp|Q20516|YV31_CAEEL UPF0057 membrane protein F47B7.1 OS=Caenorhabditis elegans
GN=F47B7.1 PE=3 SV=1
Length = 59
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALY 53
E+++AI LPPL + + C + + ++L +VP +I+AL+
Sbjct: 10 ELILAIFLPPLAIFIHGNDCNMHVAVNIILCFFFFVPAVIHALW 53
>sp|Q2HAR0|PMP3_CHAGB Plasma membrane proteolipid 3 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=PMP3 PE=3 SV=1
Length = 53
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCT 30
MP C+I+ A++LPPLGV L+ GC +
Sbjct: 1 MPFTASDICKIIFAVILPPLGVFLERGCNS 30
>sp|P14359|SNA3_YEAST Protein SNA3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SNA3 PE=1 SV=3
Length = 133
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 11 ILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRP 70
+++A+ +PP+ V + G + + LLL +L + P II+A Y + + +D RR
Sbjct: 25 MVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVVYETSSERSYDLSRRH 84
Query: 71 LYAPG 75
AP
Sbjct: 85 ATAPA 89
>sp|P56508|SNA2_YEAST Protein SNA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SNA2 PE=1 SV=1
Length = 79
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 11 ILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
+ IAI +PPL V LK G T + I LL +LG+ PG+I+ALY I
Sbjct: 9 VFIAIFIPPLAVWLKRGFFTKDLLINFLLFLLGFFPGLIHALYVI 53
>sp|Q8K2X1|AT10D_MOUSE Probable phospholipid-transporting ATPase VD OS=Mus musculus
GN=Atp10d PE=2 SV=2
Length = 1416
Score = 28.9 bits (63), Expect = 9.9, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 19 PLGVCLKHGCCTVEFCICLLLTILGYVPGIIY-ALYAIVF---VDRDEYFD 65
P G+ KH V + +C+L T + +P +Y L VF V R +YFD
Sbjct: 1283 PYGIMRKHMLDPVFYLVCVLTTFVALLPRFLYRVLQGSVFPSPVLRAKYFD 1333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.335 0.156 0.550
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,174,535
Number of Sequences: 539616
Number of extensions: 1050335
Number of successful extensions: 3835
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3769
Number of HSP's gapped (non-prelim): 43
length of query: 76
length of database: 191,569,459
effective HSP length: 47
effective length of query: 29
effective length of database: 166,207,507
effective search space: 4820017703
effective search space used: 4820017703
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 55 (25.8 bits)