Query 035016
Match_columns 76
No_of_seqs 66 out of 68
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 13:54:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035016.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035016hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3c6w_A P28ING5, inhibitor of g 40.0 9 0.00031 21.9 0.8 17 12-29 30-53 (59)
2 2vsd_A CHIR AB1; immune system 36.0 32 0.0011 19.8 2.8 21 38-58 16-36 (105)
3 3kgr_A LAIR-1, hlair1, leukocy 35.9 29 0.001 20.1 2.6 23 37-59 19-41 (106)
4 1wen_A Inhibitor of growth fam 32.3 14 0.00049 21.8 0.8 18 12-30 37-61 (71)
5 4hwn_A FC receptor-like A; FCR 29.5 31 0.0011 20.0 2.0 18 38-55 19-36 (108)
6 1weu_A Inhibitor of growth fam 29.3 18 0.00062 22.7 0.9 18 12-30 57-81 (91)
7 2g6q_A Inhibitor of growth pro 26.4 21 0.0007 20.6 0.8 17 13-30 35-56 (62)
8 3r08_E T-cell surface glycopro 20.7 64 0.0022 19.1 2.2 19 36-54 9-27 (82)
9 2xtt_A Protease inhibitor SGPI 20.7 18 0.00061 19.6 -0.3 21 8-31 10-30 (36)
10 4esk_A LAIR-1, mlair1, leukocy 19.3 81 0.0028 18.7 2.5 22 37-59 19-44 (102)
No 1
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=40.00 E-value=9 Score=21.94 Aligned_cols=17 Identities=47% Similarity=1.667 Sum_probs=12.2
Q ss_pred Cc--ccccccee-----eCCCceec
Q 035016 12 CS--WCHYLSCV-----PTSRWSCR 29 (76)
Q Consensus 12 Cs--WChYlsCv-----Pts~W~C~ 29 (76)
|. |-|+ .|| |..+|.|.
T Consensus 30 C~~~wfH~-~Cvgl~~~p~~~w~Cp 53 (59)
T 3c6w_A 30 CPIEWFHF-ACVDLTTKPKGKWFCP 53 (59)
T ss_dssp CSSCEEET-GGGTCSSCCSSCCCCH
T ss_pred CCCCCEec-ccCCcccCCCCCEECc
Confidence 64 8776 676 67788875
No 2
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=35.97 E-value=32 Score=19.77 Aligned_cols=21 Identities=10% Similarity=0.191 Sum_probs=15.5
Q ss_pred eecCCeeEEEEccCCeeeeEE
Q 035016 38 TQDGNQLNVTCSSNGKSNLYI 58 (76)
Q Consensus 38 ~q~gnqLnlTC~snGk~~~y~ 58 (76)
-..|..++|+|.+.+....|.
T Consensus 16 v~~G~~VtL~C~~~~~~~~~~ 36 (105)
T 2vsd_A 16 VSLGDTVTLRCHLPRMAAWVQ 36 (105)
T ss_dssp CCTTCEEEEEEECCSSCEEEE
T ss_pred cCcCCCEEEEEEcCCCCcEEE
Confidence 457889999999877655443
No 3
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=35.86 E-value=29 Score=20.15 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=17.3
Q ss_pred eeecCCeeEEEEccCCeeeeEEe
Q 035016 37 TTQDGNQLNVTCSSNGKSNLYIL 59 (76)
Q Consensus 37 ~~q~gnqLnlTC~snGk~~~y~l 59 (76)
....|..++|+|.+...+..|.+
T Consensus 19 vv~~G~~VtL~C~~~~~~~~f~l 41 (106)
T 3kgr_A 19 VIPLGSHVTFVCRGPVGVQTFRL 41 (106)
T ss_dssp EEETTCCEEEEEEECTTCCEEEE
T ss_pred ccCCCCeEEEEEEccCCCcEEEE
Confidence 34568889999998777666665
No 4
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=32.25 E-value=14 Score=21.85 Aligned_cols=18 Identities=50% Similarity=1.599 Sum_probs=13.0
Q ss_pred Cc--ccccccee-----eCCCceecC
Q 035016 12 CS--WCHYLSCV-----PTSRWSCRT 30 (76)
Q Consensus 12 Cs--WChYlsCv-----Pts~W~C~~ 30 (76)
|. |-|+ .|| |..+|.|..
T Consensus 37 C~~~wfH~-~Cvgl~~~p~g~w~Cp~ 61 (71)
T 1wen_A 37 CSIEWFHF-ACVGLTTKPRGKWFCPR 61 (71)
T ss_dssp CSCCCEET-TTTTCSSCCSSCCCCTT
T ss_pred CCCccEec-ccCCcCcCCCCCEECCC
Confidence 64 7775 565 778899975
No 5
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=29.51 E-value=31 Score=20.04 Aligned_cols=18 Identities=17% Similarity=0.445 Sum_probs=10.7
Q ss_pred eecCCeeEEEEccCCeee
Q 035016 38 TQDGNQLNVTCSSNGKSN 55 (76)
Q Consensus 38 ~q~gnqLnlTC~snGk~~ 55 (76)
...|..++|+|.+.+...
T Consensus 19 v~~G~~VtL~C~~~~~~~ 36 (108)
T 4hwn_A 19 PQAGSPMTLSCQTKLPLQ 36 (108)
T ss_dssp CBTTCCEEEEEEC-----
T ss_pred CCCCCcEEEEEcccCCCC
Confidence 345889999999876543
No 6
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=29.31 E-value=18 Score=22.72 Aligned_cols=18 Identities=50% Similarity=1.599 Sum_probs=13.3
Q ss_pred Cc--ccccccee-----eCCCceecC
Q 035016 12 CS--WCHYLSCV-----PTSRWSCRT 30 (76)
Q Consensus 12 Cs--WChYlsCv-----Pts~W~C~~ 30 (76)
|. |=|+ .|| |..+|.|..
T Consensus 57 C~~~WfH~-~CVgl~~~p~g~W~Cp~ 81 (91)
T 1weu_A 57 CSIEWFHF-ACVGLTTKPRGKWFCPR 81 (91)
T ss_dssp CSCCCCCS-TTTTCSSCCCSSCCCTT
T ss_pred CCCCCEec-ccCCcCcCCCCCEECcC
Confidence 64 7775 676 778899975
No 7
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=26.39 E-value=21 Score=20.61 Aligned_cols=17 Identities=47% Similarity=1.480 Sum_probs=11.4
Q ss_pred cccccccee-----eCCCceecC
Q 035016 13 SWCHYLSCV-----PTSRWSCRT 30 (76)
Q Consensus 13 sWChYlsCv-----Pts~W~C~~ 30 (76)
.|=|+ +|| |..+|.|..
T Consensus 35 ~WfH~-~Cvgl~~~p~~~w~Cp~ 56 (62)
T 2g6q_A 35 EWFHF-SCVSLTYKPKGKWYCPK 56 (62)
T ss_dssp CEEET-GGGTCSSCCSSCCCCHH
T ss_pred ccEec-ccCCcCcCCCCCEECcC
Confidence 37665 676 667888853
No 8
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=20.72 E-value=64 Score=19.08 Aligned_cols=19 Identities=16% Similarity=0.485 Sum_probs=15.7
Q ss_pred eeeecCCeeEEEEccCCee
Q 035016 36 STTQDGNQLNVTCSSNGKS 54 (76)
Q Consensus 36 ~~~q~gnqLnlTC~snGk~ 54 (76)
.....|..++|+|...|..
T Consensus 9 ~v~~~G~~v~L~C~~~g~P 27 (82)
T 3r08_E 9 KVSISGTSVELTCPLDSDE 27 (82)
T ss_dssp EEEEETTEEEEECSSCCCS
T ss_pred eEEEcCCeEEEEEECCCCC
Confidence 4567799999999998865
No 9
>2xtt_A Protease inhibitor SGPI-1; hydrolase, catalytic mechanism, inhibition, in vitro evoluti; 0.93A {Schistocerca gregaria} PDB: 1kj0_A 2f91_B 2vu8_I 1kio_A
Probab=20.70 E-value=18 Score=19.62 Aligned_cols=21 Identities=24% Similarity=0.846 Sum_probs=15.6
Q ss_pred CCCCCccccccceeeCCCceecCC
Q 035016 8 ANDHCSWCHYLSCVPTSRWSCRTE 31 (76)
Q Consensus 8 ~n~~CsWChYlsCvPts~W~C~~~ 31 (76)
..+-|-+| .|.|..+|.|...
T Consensus 10 ~~~dCNtC---~C~~~G~W~CT~~ 30 (36)
T 2xtt_A 10 KKQDCNTC---RCGSDGVWACTRM 30 (36)
T ss_dssp EEETTEEE---EECTTSCEEEECC
T ss_pred EECCCCcc---CCCCCCEEeeeCC
Confidence 34457777 7888889999764
No 10
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=19.28 E-value=81 Score=18.67 Aligned_cols=22 Identities=27% Similarity=0.463 Sum_probs=15.1
Q ss_pred eeecCCeeEEEEccCCee----eeEEe
Q 035016 37 TTQDGNQLNVTCSSNGKS----NLYIL 59 (76)
Q Consensus 37 ~~q~gnqLnlTC~snGk~----~~y~l 59 (76)
....|..++|+| +.... ..|.|
T Consensus 19 ~v~~G~~VTL~C-~~~~~~~~~~~f~l 44 (102)
T 4esk_A 19 MISQGTFVTVVC-SYSDKHDLYNMVRL 44 (102)
T ss_dssp EEETTCCEEEEE-ECTTTGGGCCEEEE
T ss_pred cccCCCcEEEEE-CCCcCCCcccEEEE
Confidence 345677899999 76655 55655
Done!