Query 035016
Match_columns 76
No_of_seqs 66 out of 68
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 13:54:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035016.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035016hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2b5ib1 b.1.2.1 (B:6-103) Inte 42.5 10 0.00074 23.5 3.0 36 21-56 48-87 (98)
2 d2nxyb2 b.1.1.3 (B:1098-1181) 33.5 9.4 0.00068 20.2 1.6 16 39-54 12-27 (84)
3 d1olla2 b.1.1.4 (A:96-188) Lig 32.1 16 0.0011 20.6 2.5 22 38-59 15-36 (93)
4 d1f2qa1 b.1.1.4 (A:4-85) IgE h 31.3 10 0.00075 20.0 1.5 17 39-55 14-30 (82)
5 d1pn0a2 c.47.1.10 (A:462-662) 31.1 8.9 0.00065 24.9 1.4 35 36-74 35-74 (201)
6 d1olla1 b.1.1.4 (A:1-95) Ligan 30.5 21 0.0015 19.7 2.9 22 38-59 15-36 (95)
7 d1s3aa1 c.47.1.22 (A:15-99) NA 29.2 21 0.0016 20.0 2.7 20 50-69 56-75 (85)
8 d1ucta1 b.1.1.4 (A:2-100) Ig a 27.8 20 0.0015 19.5 2.4 22 38-59 18-39 (99)
9 d1fnla1 b.1.1.4 (A:3-86) Fc ga 23.1 21 0.0015 18.8 1.8 17 38-54 17-33 (84)
10 d1iama1 b.1.1.3 (A:83-185) Int 23.0 15 0.0011 20.3 1.2 15 38-52 16-30 (103)
11 d1e88a3 g.27.1.1 (A:1-41) Fibr 22.7 27 0.002 18.5 2.2 17 38-54 21-37 (41)
12 d1ugna2 b.1.1.4 (A:98-195) Lig 21.9 38 0.0027 18.8 2.9 23 37-59 14-36 (98)
13 d1quba1 g.18.1.1 (A:1-62) beta 20.6 25 0.0018 18.1 1.8 15 40-54 39-53 (62)
14 d2rkya1 g.27.1.1 (A:152-197) F 20.0 19 0.0014 19.2 1.2 17 39-55 24-40 (46)
No 1
>d2b5ib1 b.1.2.1 (B:6-103) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.52 E-value=10 Score=23.52 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=27.6
Q ss_pred eeCCCceec----CCCceeeeeecCCeeEEEEccCCeeee
Q 035016 21 VPTSRWSCR----TEPAFCSTTQDGNQLNVTCSSNGKSNL 56 (76)
Q Consensus 21 vPts~W~C~----~~~~~C~~~q~gnqLnlTC~snGk~~~ 56 (76)
|+..+|.|+ ....-+.+...-=.|+|.|.-+++-+.
T Consensus 48 v~~~swaCnLilg~p~~Q~LT~~D~~~lsV~C~ege~wr~ 87 (98)
T d2b5ib1 48 VSQASWACNLILGAPDSQKLTTVDIVTLRVLCREGVRWRV 87 (98)
T ss_dssp CSTTCEEEEEECSSTTCCCCCTTCCEEEEEEECCTTSCEE
T ss_pred cCCCceEeeeeecCccccceEeEeEEEEEEEEecCCCeEE
Confidence 788999998 345567777777799999987766443
No 2
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.50 E-value=9.4 Score=20.16 Aligned_cols=16 Identities=31% Similarity=0.316 Sum_probs=13.6
Q ss_pred ecCCeeEEEEccCCee
Q 035016 39 QDGNQLNVTCSSNGKS 54 (76)
Q Consensus 39 q~gnqLnlTC~snGk~ 54 (76)
..|..++|+|...|+.
T Consensus 12 ~~G~~~~L~C~~~g~p 27 (84)
T d2nxyb2 12 LQGQSLTLTLESPPGS 27 (84)
T ss_dssp ETTCCEEEEEECCTTC
T ss_pred ECCCeEEEEEEeEcCC
Confidence 4688999999998875
No 3
>d1olla2 b.1.1.4 (A:96-188) Ligand binding domain of NK receptor NKp46 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.07 E-value=16 Score=20.55 Aligned_cols=22 Identities=14% Similarity=0.532 Sum_probs=18.8
Q ss_pred eecCCeeEEEEccCCeeeeEEe
Q 035016 38 TQDGNQLNVTCSSNGKSNLYIL 59 (76)
Q Consensus 38 ~q~gnqLnlTC~snGk~~~y~l 59 (76)
-..|..++|.|.+...+..|.|
T Consensus 15 V~~G~~VTL~C~~~~~~~~f~L 36 (93)
T d1olla2 15 VISGEKVTFYCRLDTATSMFLL 36 (93)
T ss_dssp EETTCEEEEEEECSSSCSEEEE
T ss_pred ccCCCcEEEEECCCCCCCEEEE
Confidence 4568999999999988888887
No 4
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.26 E-value=10 Score=20.05 Aligned_cols=17 Identities=24% Similarity=0.481 Sum_probs=13.3
Q ss_pred ecCCeeEEEEccCCeee
Q 035016 39 QDGNQLNVTCSSNGKSN 55 (76)
Q Consensus 39 q~gnqLnlTC~snGk~~ 55 (76)
.-|..++|+|...|...
T Consensus 14 ~~G~~v~L~C~~~~~~~ 30 (82)
T d1f2qa1 14 FKGENVTLTCNGNNFFE 30 (82)
T ss_dssp ETTCCEEEECCTTCC--
T ss_pred eCCCeEEEEEEEeeeee
Confidence 45899999999998874
No 5
>d1pn0a2 c.47.1.10 (A:462-662) Phenol hydroxylase, C-terminal domain {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}
Probab=31.14 E-value=8.9 Score=24.90 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=23.3
Q ss_pred eeeecCCeeEEEEccCCeeeeEEecC-CCh----HHHHHHHHhh
Q 035016 36 STTQDGNQLNVTCSSNGKSNLYILSN-PSS----SQIQSLCTEL 74 (76)
Q Consensus 36 ~~~q~gnqLnlTC~snGk~~~y~l~n-~s~----s~i~~LC~ql 74 (76)
..++++..+ .++|++++|.|+. .+. ++++.|+..|
T Consensus 35 ~p~~L~~~~----~adGrfrI~vFaGd~~~~~~~~~l~~la~~L 74 (201)
T d1pn0a2 35 LWMHFGDRL----VTDGRFRIIVFAGKATDATQMSRIKKFAAYL 74 (201)
T ss_dssp EEEEGGGGC----CCSSCEEEEEEEECTTSHHHHHHHHHHHHHH
T ss_pred CEeehhccc----cCCCcEEEEEEecCCCccchhhHHHHHHHHH
Confidence 445555555 3899999999964 322 2377787654
No 6
>d1olla1 b.1.1.4 (A:1-95) Ligand binding domain of NK receptor NKp46 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.45 E-value=21 Score=19.65 Aligned_cols=22 Identities=23% Similarity=0.376 Sum_probs=18.0
Q ss_pred eecCCeeEEEEccCCeeeeEEe
Q 035016 38 TQDGNQLNVTCSSNGKSNLYIL 59 (76)
Q Consensus 38 ~q~gnqLnlTC~snGk~~~y~l 59 (76)
...|..++|.|.+...+..|.|
T Consensus 15 V~~G~~VTL~C~~~~~~~~f~L 36 (95)
T d1olla1 15 VPKEKQVTICCQGNYGAVEYQL 36 (95)
T ss_dssp EETTCCEEEEEECCTTCCEEEE
T ss_pred ccCCCcEEEEEecCCCccEEEE
Confidence 4578999999999888777776
No 7
>d1s3aa1 c.47.1.22 (A:15-99) NADH-ubiquinone oxidoreductase b8 subunit, CI-B8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.16 E-value=21 Score=19.95 Aligned_cols=20 Identities=25% Similarity=0.242 Sum_probs=17.7
Q ss_pred cCCeeeeEEecCCChHHHHH
Q 035016 50 SNGKSNLYILSNPSSSQIQS 69 (76)
Q Consensus 50 snGk~~~y~l~n~s~s~i~~ 69 (76)
-||+.+...+.|.+.++|.+
T Consensus 56 ~nG~e~~i~l~n~~~~eI~~ 75 (85)
T d1s3aa1 56 AFGQETNVPLNNFSADQVTR 75 (85)
T ss_dssp SSCCEEEEECTTCCHHHHHH
T ss_pred cCCcEEEEECCCCCHHHHHH
Confidence 58999999999999999854
No 8
>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.82 E-value=20 Score=19.48 Aligned_cols=22 Identities=14% Similarity=0.240 Sum_probs=16.0
Q ss_pred eecCCeeEEEEccCCeeeeEEe
Q 035016 38 TQDGNQLNVTCSSNGKSNLYIL 59 (76)
Q Consensus 38 ~q~gnqLnlTC~snGk~~~y~l 59 (76)
-..|..++|+|.+......|.|
T Consensus 18 V~~G~~VTL~C~~~~~~~~f~l 39 (99)
T d1ucta1 18 IPLDGSVKIQCQAIREAYLTQL 39 (99)
T ss_dssp EETTCCEEEEECCCTTCSEEEE
T ss_pred eeCCCeEEEEEcCCCCCcEEEE
Confidence 3468899999987766655555
No 9
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), III [TaxId: 9606]}
Probab=23.07 E-value=21 Score=18.79 Aligned_cols=17 Identities=6% Similarity=0.294 Sum_probs=13.6
Q ss_pred eecCCeeEEEEccCCee
Q 035016 38 TQDGNQLNVTCSSNGKS 54 (76)
Q Consensus 38 ~q~gnqLnlTC~snGk~ 54 (76)
-..|..++|+|...|..
T Consensus 17 v~~G~~vtL~C~~~~~~ 33 (84)
T d1fnla1 17 VLEKDSVTLKCQGAYSP 33 (84)
T ss_dssp EETTCCEEEEEECCCBT
T ss_pred EeCCCeEEEEEEeccCC
Confidence 34688999999988855
No 10
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1 (ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.03 E-value=15 Score=20.31 Aligned_cols=15 Identities=33% Similarity=0.696 Sum_probs=12.6
Q ss_pred eecCCeeEEEEccCC
Q 035016 38 TQDGNQLNVTCSSNG 52 (76)
Q Consensus 38 ~q~gnqLnlTC~snG 52 (76)
-+.|.+++|+|...|
T Consensus 16 v~~G~~~~L~C~v~g 30 (103)
T d1iama1 16 QPVGKQLTLRCQVEG 30 (103)
T ss_dssp ECTTSEEEEEEEEEC
T ss_pred EeCCCEEEEEEEecC
Confidence 457999999998876
No 11
>d1e88a3 g.27.1.1 (A:1-41) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.68 E-value=27 Score=18.47 Aligned_cols=17 Identities=47% Similarity=0.632 Sum_probs=13.8
Q ss_pred eecCCeeEEEEccCCee
Q 035016 38 TQDGNQLNVTCSSNGKS 54 (76)
Q Consensus 38 ~q~gnqLnlTC~snGk~ 54 (76)
+|-..|+--||++||.+
T Consensus 21 tQGskqMlCTClgnGis 37 (41)
T d1e88a3 21 TQGNKQMLCTCLGNGVS 37 (41)
T ss_dssp ESSSSEEEEEECSSSCC
T ss_pred hcCcceeEEeeeCCcee
Confidence 45667899999999976
No 12
>d1ugna2 b.1.1.4 (A:98-195) Ligand binding domain of lir-1 (ilt2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.88 E-value=38 Score=18.80 Aligned_cols=23 Identities=22% Similarity=0.469 Sum_probs=18.8
Q ss_pred eeecCCeeEEEEccCCeeeeEEe
Q 035016 37 TTQDGNQLNVTCSSNGKSNLYIL 59 (76)
Q Consensus 37 ~~q~gnqLnlTC~snGk~~~y~l 59 (76)
....|..++|.|.+......|.|
T Consensus 14 ~v~~G~~VTL~C~~~~~~~~f~L 36 (98)
T d1ugna2 14 VVNSGGNVTLQCDSQVAFDGFIL 36 (98)
T ss_dssp EEETTCCEEEEEECSSCCSEEEE
T ss_pred ccCCCCcEEEEeCCCCCCCEEEE
Confidence 35678899999999888877777
No 13
>d1quba1 g.18.1.1 (A:1-62) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.62 E-value=25 Score=18.09 Aligned_cols=15 Identities=20% Similarity=0.341 Sum_probs=10.7
Q ss_pred cCCeeEEEEccCCee
Q 035016 40 DGNQLNVTCSSNGKS 54 (76)
Q Consensus 40 ~gnqLnlTC~snGk~ 54 (76)
.|..-++||+++|+.
T Consensus 39 ~g~~~~~~C~~~G~W 53 (62)
T d1quba1 39 RGGMRKFICPLTGLW 53 (62)
T ss_dssp TTSCEEEECCTTSCC
T ss_pred eecCCeeEeCcCCEE
Confidence 455557889888875
No 14
>d2rkya1 g.27.1.1 (A:152-197) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.01 E-value=19 Score=19.24 Aligned_cols=17 Identities=24% Similarity=0.397 Sum_probs=13.8
Q ss_pred ecCCeeEEEEccCCeee
Q 035016 39 QDGNQLNVTCSSNGKSN 55 (76)
Q Consensus 39 q~gnqLnlTC~snGk~~ 55 (76)
+.|..|.=||.++|+=+
T Consensus 24 ~~G~~~~CtC~G~G~Ge 40 (46)
T d2rkya1 24 QGWMMVDCTCLGEGSGR 40 (46)
T ss_dssp TTTEEEEEEEEETTTTE
T ss_pred CCccEEEeEEeCCCcEE
Confidence 46788999999999743
Done!