Your job contains 1 sequence.
>035017
MQEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPT
NISHLLYVANKLRNLG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035017
(76 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2119435 - symbol:AT4G13730 species:3702 "Arabi... 338 1.1e-30 1
UNIPROTKB|B3KW04 - symbol:TBC1D13 "TBC1 domain family mem... 167 1.5e-12 1
UNIPROTKB|E2RQB4 - symbol:TBC1D13 "Uncharacterized protei... 170 3.6e-12 1
UNIPROTKB|F1RR65 - symbol:TBC1D13 "Uncharacterized protei... 170 3.6e-12 1
UNIPROTKB|J9NWF3 - symbol:TBC1D13 "Uncharacterized protei... 170 3.7e-12 1
UNIPROTKB|Q9NVG8 - symbol:TBC1D13 "TBC1 domain family mem... 167 7.7e-12 1
UNIPROTKB|F1MXD4 - symbol:TBC1D13 "Uncharacterized protei... 163 2.1e-11 1
MGI|MGI:2385326 - symbol:Tbc1d13 "TBC1 domain family, mem... 163 2.1e-11 1
RGD|1591937 - symbol:Tbc1d13 "TBC1 domain family, member ... 158 7.4e-11 1
ZFIN|ZDB-GENE-080204-86 - symbol:tbc1d13 "TBC1 domain fam... 155 1.7e-10 1
UNIPROTKB|E1BXI8 - symbol:TBC1D13 "Uncharacterized protei... 153 2.6e-10 1
FB|FBgn0035916 - symbol:GAPsec "GTPase activating protein... 141 5.3e-09 1
DICTYBASE|DDB_G0269052 - symbol:DDB_G0269052 species:4468... 133 7.5e-08 1
WB|WBGene00009726 - symbol:tbc-13 species:6239 "Caenorhab... 126 2.8e-07 1
>TAIR|locus:2119435 [details] [associations]
symbol:AT4G13730 species:3702 "Arabidopsis thaliana"
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005622
eggNOG:COG5210 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
EMBL:AL035528 EMBL:AL161537 HSSP:Q08484 HOGENOM:HOG000006332
OMA:MELYLKL IPI:IPI00533571 PIR:T05242 RefSeq:NP_193109.1
UniGene:At.33343 ProteinModelPortal:Q9SVN9 SMR:Q9SVN9 PaxDb:Q9SVN9
PRIDE:Q9SVN9 EnsemblPlants:AT4G13730.1 GeneID:827007
KEGG:ath:AT4G13730 TAIR:At4g13730 InParanoid:Q9SVN9
PhylomeDB:Q9SVN9 ProtClustDB:CLSN2685950 ArrayExpress:Q9SVN9
Genevestigator:Q9SVN9 Uniprot:Q9SVN9
Length = 449
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 61/72 (84%), Positives = 68/72 (94%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEFNF ++LHIWDTLLSDP+GPQET LR+CC MLIL+RRRLLAGD TSNLKLLQNYPPTN
Sbjct: 376 QEFNFVESLHIWDTLLSDPEGPQETLLRICCAMLILVRRRLLAGDFTSNLKLLQNYPPTN 435
Query: 62 ISHLLYVANKLR 73
ISH+LYVA+KLR
Sbjct: 436 ISHMLYVADKLR 447
>UNIPROTKB|B3KW04 [details] [associations]
symbol:TBC1D13 "TBC1 domain family member 13" species:9606
"Homo sapiens" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
EMBL:CH471090 GO:GO:0005622 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 EMBL:AL441992 UniGene:Hs.3376 HGNC:HGNC:25571
HOVERGEN:HBG058240 ChiTaRS:TBC1D13 EMBL:AK123828 IPI:IPI01014692
SMR:B3KW04 STRING:B3KW04 Ensembl:ENST00000539497 Uniprot:B3KW04
Length = 219
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + IWD+L +D D + L VCC ML+LIR +LL GD T N++LLQ+YP T+
Sbjct: 146 QEFLLPDVIRIWDSLFAD-DNRFDFLLLVCCAMLMLIREQLLEGDFTVNMRLLQDYPITD 204
Query: 62 ISHLLYVANKLRN 74
+ +L A +L++
Sbjct: 205 VCQILQKAKELQD 217
>UNIPROTKB|E2RQB4 [details] [associations]
symbol:TBC1D13 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:54662 EMBL:AAEX03006852
RefSeq:XP_537821.3 Ensembl:ENSCAFT00000031883 GeneID:480702
KEGG:cfa:480702 NextBio:20855687 Uniprot:E2RQB4
Length = 400
Score = 170 (64.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + IWD+L +D D + L VCC MLILIR +LL GD T N++LLQ+YP T+
Sbjct: 327 QEFLLPDVIRIWDSLFAD-DNRFDFLLLVCCAMLILIREQLLEGDFTVNMRLLQDYPITD 385
Query: 62 ISHLLYVANKLRN 74
+ +L A +L++
Sbjct: 386 VCQILQKAKELQD 398
>UNIPROTKB|F1RR65 [details] [associations]
symbol:TBC1D13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab
GTPase activator activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 OMA:MELYLKL EMBL:FP236218
Ensembl:ENSSSCT00000006223 Uniprot:F1RR65
Length = 400
Score = 170 (64.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + IWD+L +D D + L VCC MLILIR +LL GD T N++LLQ+YP T+
Sbjct: 327 QEFLLPDVIRIWDSLFAD-DNRFDFLLLVCCAMLILIREQLLEGDFTVNMRLLQDYPITD 385
Query: 62 ISHLLYVANKLRN 74
+ +L A +L++
Sbjct: 386 VCQILQKAKELQD 398
>UNIPROTKB|J9NWF3 [details] [associations]
symbol:TBC1D13 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 OMA:MELYLKL EMBL:AAEX03006852
Ensembl:ENSCAFT00000047888 Uniprot:J9NWF3
Length = 403
Score = 170 (64.9 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + IWD+L +D D + L VCC MLILIR +LL GD T N++LLQ+YP T+
Sbjct: 330 QEFLLPDVIRIWDSLFAD-DNRFDFLLLVCCAMLILIREQLLEGDFTVNMRLLQDYPITD 388
Query: 62 ISHLLYVANKLRN 74
+ +L A +L++
Sbjct: 389 VCQILQKAKELQD 401
>UNIPROTKB|Q9NVG8 [details] [associations]
symbol:TBC1D13 "TBC1 domain family member 13" species:9606
"Homo sapiens" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
EMBL:CH471090 GO:GO:0005622 eggNOG:COG5210 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 EMBL:AL441992 EMBL:AB449899
EMBL:AK001605 EMBL:AK289777 EMBL:BC132817 IPI:IPI00301216
IPI:IPI00647082 RefSeq:NP_060671.3 UniGene:Hs.3376
ProteinModelPortal:Q9NVG8 SMR:Q9NVG8 STRING:Q9NVG8
PhosphoSite:Q9NVG8 DMDM:308153549 PaxDb:Q9NVG8 PRIDE:Q9NVG8
DNASU:54662 Ensembl:ENST00000223865 Ensembl:ENST00000372648
GeneID:54662 KEGG:hsa:54662 UCSC:uc010myj.3 UCSC:uc010myk.3
CTD:54662 GeneCards:GC09P131549 H-InvDB:HIX0008436 HGNC:HGNC:25571
HPA:HPA045865 neXtProt:NX_Q9NVG8 PharmGKB:PA134898118
HOGENOM:HOG000006332 HOVERGEN:HBG058240 OMA:MELYLKL
PhylomeDB:Q9NVG8 ChiTaRS:TBC1D13 GenomeRNAi:54662 NextBio:57202
ArrayExpress:Q9NVG8 Bgee:Q9NVG8 CleanEx:HS_TBC1D13
Genevestigator:Q9NVG8 GermOnline:ENSG00000107021 Uniprot:Q9NVG8
Length = 400
Score = 167 (63.8 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + IWD+L +D D + L VCC ML+LIR +LL GD T N++LLQ+YP T+
Sbjct: 327 QEFLLPDVIRIWDSLFAD-DNRFDFLLLVCCAMLMLIREQLLEGDFTVNMRLLQDYPITD 385
Query: 62 ISHLLYVANKLRN 74
+ +L A +L++
Sbjct: 386 VCQILQKAKELQD 398
>UNIPROTKB|F1MXD4 [details] [associations]
symbol:TBC1D13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab
GTPase activator activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:54662 OMA:MELYLKL
EMBL:DAAA02032186 IPI:IPI01001850 RefSeq:NP_001193644.1
UniGene:Bt.45171 Ensembl:ENSBTAT00000016559 GeneID:509584
KEGG:bta:509584 NextBio:20869031 Uniprot:F1MXD4
Length = 399
Score = 163 (62.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + IWD+L +D + + L VCC MLILIR +LL GD T N++LLQ+YP T+
Sbjct: 326 QEFVLPDVIRIWDSLFADSNR-FDFLLLVCCAMLILIREQLLEGDFTVNMRLLQDYPITD 384
Query: 62 ISHLLYVANKLRN 74
+ +L A +L++
Sbjct: 385 VCQVLQKAKELQD 397
>MGI|MGI:2385326 [details] [associations]
symbol:Tbc1d13 "TBC1 domain family, member 13" species:10090
"Mus musculus" [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 MGI:MGI:2385326 GO:GO:0005622 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:54662 HOGENOM:HOG000006332
HOVERGEN:HBG058240 OMA:MELYLKL EMBL:BC025586 IPI:IPI00153730
RefSeq:NP_666364.1 UniGene:Mm.19172 UniGene:Mm.490985
ProteinModelPortal:Q8R3D1 SMR:Q8R3D1 PhosphoSite:Q8R3D1
PaxDb:Q8R3D1 PRIDE:Q8R3D1 Ensembl:ENSMUST00000044556 GeneID:70296
KEGG:mmu:70296 InParanoid:Q8R3D1 OrthoDB:EOG4KH2V1 NextBio:331332
Bgee:Q8R3D1 CleanEx:MM_TBC1D13 Genevestigator:Q8R3D1
GermOnline:ENSMUSG00000039678 Uniprot:Q8R3D1
Length = 400
Score = 163 (62.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + IWD+L +D + + L VCC MLILIR +LL GD T N++LLQ+YP T+
Sbjct: 327 QEFLLPDVIRIWDSLFADGNR-FDFLLLVCCAMLILIREQLLEGDFTVNMRLLQDYPITD 385
Query: 62 ISHLLYVANKLRN 74
+ +L A +L++
Sbjct: 386 VCQILQKAKELQD 398
>RGD|1591937 [details] [associations]
symbol:Tbc1d13 "TBC1 domain family, member 13" species:10116
"Rattus norvegicus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
RGD:1591937 GO:GO:0005622 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 GeneTree:ENSGT00510000046400 CTD:54662
OrthoDB:EOG4KH2V1 IPI:IPI00373585 RefSeq:XP_001077153.1
RefSeq:XP_575106.2 PRIDE:D4AEG7 Ensembl:ENSRNOT00000021431
GeneID:499768 KEGG:rno:499768 UCSC:RGD:1591937 NextBio:703946
Uniprot:D4AEG7
Length = 400
Score = 158 (60.7 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + IWD+L +D + + L VCC MLILIR +LL GD T N++LLQ+YP ++
Sbjct: 327 QEFLLPDVIRIWDSLFADGNR-FDFLLLVCCAMLILIREQLLKGDFTVNMRLLQDYPISD 385
Query: 62 ISHLLYVANKLRN 74
+ +L A +L++
Sbjct: 386 VCKILQKAKELQD 398
>ZFIN|ZDB-GENE-080204-86 [details] [associations]
symbol:tbc1d13 "TBC1 domain family, member 13"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 ZFIN:ZDB-GENE-080204-86 GO:GO:0005622 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 CTD:54662
HOVERGEN:HBG058240 OrthoDB:EOG4KH2V1 EMBL:BC155093 IPI:IPI00613190
RefSeq:NP_001107894.1 UniGene:Dr.89520 ProteinModelPortal:A9JSV4
GeneID:561380 KEGG:dre:561380 NextBio:20883897 Uniprot:A9JSV4
Length = 414
Score = 155 (59.6 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + IWD+L S D E + VCC MLILIR +LLAGD T+N++LLQ+YP ++
Sbjct: 327 QEFLLPDVIRIWDSLFSHQDR-FEFLIPVCCAMLILIRDQLLAGDFTTNMRLLQDYPISD 385
Query: 62 I 62
+
Sbjct: 386 V 386
>UNIPROTKB|E1BXI8 [details] [associations]
symbol:TBC1D13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:54662 OMA:MELYLKL
EMBL:AADN02026622 EMBL:AADN02026623 IPI:IPI00577808
RefSeq:XP_001233464.1 RefSeq:XP_003642308.1 UniGene:Gga.13409
UniGene:Gga.53693 Ensembl:ENSGALT00000007398 GeneID:100859585
GeneID:771771 KEGG:gga:100859585 KEGG:gga:771771 NextBio:20921966
Uniprot:E1BXI8
Length = 399
Score = 153 (58.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + IWD+L +D D + L VCC ML LIR +LL GD T N++LLQ+YP ++
Sbjct: 326 QEFLLPDVIRIWDSLFAD-DKRFDFLLLVCCAMLTLIRDQLLEGDFTLNMRLLQDYPISD 384
Query: 62 ISHLLYVANKLRN 74
+ +L A +L++
Sbjct: 385 VHLILKKAKELQD 397
>FB|FBgn0035916 [details] [associations]
symbol:GAPsec "GTPase activating protein, SECIS-dependent
read-through" species:7227 "Drosophila melanogaster" [GO:0005097
"Rab GTPase activator activity" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0001514 "selenocysteine
incorporation" evidence=IDA] [GO:0006451 "translational
readthrough" evidence=IDA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 GO:GO:0005622 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 HSSP:Q08484
GO:GO:0006451 EMBL:AY058542 ProteinModelPortal:Q95TT8 SMR:Q95TT8
PaxDb:Q95TT8 PRIDE:Q95TT8 FlyBase:FBgn0035916 InParanoid:Q95TT8
OrthoDB:EOG4BVQ93 ArrayExpress:Q95TT8 Bgee:Q95TT8 Uniprot:Q95TT8
Length = 403
Score = 141 (54.7 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D L IWD++ +D + + +++CC M+++ + +L D SN+KLLQNYPP +
Sbjct: 333 QEFPLPDVLRIWDSVFAD-EQRFDFLIKICCSMILIQKEAILENDFASNVKLLQNYPPID 391
Query: 62 ISHLLYVANKL 72
I+ ++ A L
Sbjct: 392 INVVIAHAGSL 402
>DICTYBASE|DDB_G0269052 [details] [associations]
symbol:DDB_G0269052 species:44689 "Dictyostelium
discoideum" [GO:0032851 "positive regulation of Rab GTPase
activity" evidence=IEA] [GO:0032313 "regulation of Rab GTPase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
dictyBase:DDB_G0269052 EMBL:AAFI02000004 GO:GO:0005622
eggNOG:COG5210 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
RefSeq:XP_646856.1 ProteinModelPortal:Q55F14
EnsemblProtists:DDB0216614 GeneID:8616539 KEGG:ddi:DDB_G0269052
InParanoid:Q55F14 OMA:TEHENIS Uniprot:Q55F14
Length = 604
Score = 133 (51.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 31/74 (41%), Positives = 40/74 (54%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D L +WD L SDP+ + CC MLI +R ++L +LKLLQ YP T
Sbjct: 266 QEFELPDVLRLWDALFSDPNR-FDLLYFFCCSMLICVRDQILKSSFADSLKLLQAYPNTI 324
Query: 62 ISHLLY-VANKLRN 74
H +Y A L+N
Sbjct: 325 DFHTIYSTALSLKN 338
>WB|WBGene00009726 [details] [associations]
symbol:tbc-13 species:6239 "Caenorhabditis elegans"
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0032313 "regulation
of Rab GTPase activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
eggNOG:COG5210 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
HSSP:Q08484 GeneTree:ENSGT00510000046400 EMBL:Z68117
HOGENOM:HOG000006332 OMA:MELYLKL PIR:T22230 RefSeq:NP_510095.2
ProteinModelPortal:Q20436 SMR:Q20436 PaxDb:Q20436
EnsemblMetazoa:F45E6.3 GeneID:181406 KEGG:cel:CELE_F45E6.3
UCSC:F45E6.3 CTD:181406 WormBase:F45E6.3 InParanoid:Q20436
NextBio:913798 Uniprot:Q20436
Length = 459
Score = 126 (49.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 2 QEFNFADNLHIWDTLLSDPDGPQETQLRVCCVMLILIRRRLLAGDITSNLKLLQNYPPTN 61
QEF D + +WD L SDP Q VC M+ L R L+ GD ++LLQNYP T+
Sbjct: 352 QEFPLPDVITLWDALFSDPQRFALLQY-VCLAMMELKREPLINGDFPFCVRLLQNYPDTD 410
Query: 62 ISHLLYVANKLRN 74
I+ ++ A +R+
Sbjct: 411 IAKIVAFAQDIRD 423
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.141 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 76 76 0.00091 102 3 11 22 0.49 28
29 0.48 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 533 (57 KB)
Total size of DFA: 102 KB (2071 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.82u 0.11s 8.93t Elapsed: 00:00:01
Total cpu time: 8.82u 0.11s 8.93t Elapsed: 00:00:01
Start: Fri May 10 04:47:48 2013 End: Fri May 10 04:47:49 2013