BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035020
MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPE
ELREMARELARNKNIR

High Scoring Gene Products

Symbol, full name Information P value
AT4G14615 protein from Arabidopsis thaliana 6.0e-16
AT1G52825 protein from Arabidopsis thaliana 1.6e-15

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035020
        (76 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006462 - symbol:AT4G14615 "AT4G14615" speci...   199  6.0e-16   1
TAIR|locus:1005716767 - symbol:AT1G52825 "AT1G52825" spec...   195  1.6e-15   1


>TAIR|locus:505006462 [details] [associations]
            symbol:AT4G14615 "AT4G14615" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687
            GenomeReviews:CT486007_GR InterPro:IPR018625 Pfam:PF09803
            HOGENOM:HOG000005713 ProtClustDB:CLSN2689435 EMBL:AY088160
            EMBL:BT024527 EMBL:AK117906 IPI:IPI00546347 RefSeq:NP_567436.1
            UniGene:At.33261 STRING:Q8L9X5 PRIDE:Q8L9X5
            EnsemblPlants:AT4G14615.1 GeneID:827111 KEGG:ath:AT4G14615
            TAIR:At4g14615 InParanoid:Q8L9X5 PhylomeDB:Q8L9X5
            Genevestigator:Q8L9X5 Uniprot:Q8L9X5
        Length = 76

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 36/47 (76%), Positives = 43/47 (91%)

Query:     1 MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYV 47
             MS++GTSKG+LEI KFG+YV VP+ LMYTFANN+ NI+KFMGNRSYV
Sbjct:     1 MSSVGTSKGVLEIVKFGVYVAVPIVLMYTFANNSTNIKKFMGNRSYV 47


>TAIR|locus:1005716767 [details] [associations]
            symbol:AT1G52825 "AT1G52825" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR018625 Pfam:PF09803 EMBL:BT004663 EMBL:AK117948
            IPI:IPI00539450 RefSeq:NP_849801.1 UniGene:At.46095
            UniGene:At.67595 UniGene:At.73951 IntAct:Q8GXZ7
            EnsemblPlants:AT1G52825.1 GeneID:841716 KEGG:ath:AT1G52825
            TAIR:At1g52825 eggNOG:NOG306659 HOGENOM:HOG000005713
            InParanoid:Q8GXZ7 OMA:YPKEAPR PhylomeDB:Q8GXZ7
            ProtClustDB:CLSN2689435 Genevestigator:Q8GXZ7 Uniprot:Q8GXZ7
        Length = 78

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 36/47 (76%), Positives = 43/47 (91%)

Query:     1 MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYV 47
             MS++GTSKGILEIAKFG+YV VP+ L+YTFANN+ NI+KFMGN SYV
Sbjct:     1 MSSVGTSKGILEIAKFGVYVAVPIVLIYTFANNSTNIKKFMGNHSYV 47


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       76        52   0.00091  102 3  11 22  0.37    27
                                                     29  0.47    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  336 (36 KB)
  Total size of DFA:  55 KB (2058 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.37u 0.12s 5.49t   Elapsed:  00:00:00
  Total cpu time:  5.37u 0.12s 5.49t   Elapsed:  00:00:00
  Start:  Fri May 10 04:49:35 2013   End:  Fri May 10 04:49:35 2013

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