BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035021
MYHHVIIYVMTASTFSFLNYICLWVLQDAIQIDKDLLQNSARALETLVSVGMRMGVSKKE
ILQTELPSLEACVIAA

High Scoring Gene Products

Symbol, full name Information P value
PSD3
phosphatidylserine decarboxylase 3 		protein from Arabidopsis thaliana 7.5e-07
PSD2
AT5G57190 		protein from Arabidopsis thaliana 2.6e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035021
        (76 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2120820 - symbol:PSD3 "phosphatidylserine deca...   124  7.5e-07   1
TAIR|locus:2175574 - symbol:PSD2 "phosphatidylserine deca...   119  2.6e-06   1


>TAIR|locus:2120820 [details] [associations]
            symbol:PSD3 "phosphatidylserine decarboxylase 3"
            species:3702 "Arabidopsis thaliana" [GO:0004609 "phosphatidylserine
            decarboxylase activity" evidence=IEA;IGI;IDA] [GO:0005509 "calcium
            ion binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008654 "phospholipid biosynthetic process" evidence=IEA;ISS]
            [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            InterPro:IPR002048 InterPro:IPR003817 InterPro:IPR005221
            InterPro:IPR008973 InterPro:IPR011992 Pfam:PF02666 Pfam:PF13499
            PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005783
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005509
            Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0008654 GO:GO:0004609
            SUPFAM:SSF49562 eggNOG:COG0688 KO:K01613 PANTHER:PTHR10067
            TIGRFAMs:TIGR00163 EMBL:EF203901 IPI:IPI00845150 RefSeq:NP_567736.3
            UniGene:At.24680 ProteinModelPortal:A4GNA8 SMR:A4GNA8 STRING:A4GNA8
            PaxDb:A4GNA8 PRIDE:A4GNA8 EnsemblPlants:AT4G25970.1 GeneID:828703
            KEGG:ath:AT4G25970 TAIR:At4g25970 HOGENOM:HOG000254780
            InParanoid:A4GNA8 OMA:IVDYDED PhylomeDB:A4GNA8 ProtClustDB:PLN02964
            BioCyc:MetaCyc:AT4G25970-MONOMER Genevestigator:A4GNA8
            Uniprot:A4GNA8
        Length = 635

 Score = 124 (48.7 bits), Expect = 7.5e-07, P = 7.5e-07
 Identities = 32/62 (51%), Positives = 43/62 (69%)

Query:    15 FSF--LNYICLWVLQDAIQIDKDLLQNSARALETLVSVGMRMGVSKKEILQTELPSLEAC 72
             FSF     IC++  +D+I+ID+DLL NSAR+LETLV+VGM++GVS         P LE C
Sbjct:   581 FSFGGSTVICVFE-KDSIKIDEDLLANSARSLETLVTVGMQLGVS--------FPKLENC 631

Query:    73 VI 74
             V+
Sbjct:   632 VL 633


>TAIR|locus:2175574 [details] [associations]
            symbol:PSD2 "phosphatidylserine decarboxylase 2"
            species:3702 "Arabidopsis thaliana" [GO:0004609 "phosphatidylserine
            decarboxylase activity" evidence=IEA;ISS;IMP;IDA] [GO:0005509
            "calcium ion binding" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=ISM] [GO:0008654 "phospholipid biosynthetic process"
            evidence=IEA;ISS] [GO:0009705 "plant-type vacuole membrane"
            evidence=IDA] InterPro:IPR002048 InterPro:IPR003817
            InterPro:IPR005221 InterPro:IPR008973 InterPro:IPR011992
            Pfam:PF02666 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054
            Prosite:PS00018 EMBL:CP002688 GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 GO:GO:0008654 GO:GO:0004609 SUPFAM:SSF49562
            GO:GO:0009705 KO:K01613 PANTHER:PTHR10067 TIGRFAMs:TIGR00163
            IPI:IPI00845127 RefSeq:NP_200529.4 UniGene:At.55599
            ProteinModelPortal:F4KAK5 SMR:F4KAK5 EnsemblPlants:AT5G57190.1
            GeneID:835825 KEGG:ath:AT5G57190 OMA:ISTELWI ArrayExpress:F4KAK5
            Uniprot:F4KAK5
        Length = 635

 Score = 119 (46.9 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query:    15 FSF--LNYICLWVLQDAIQIDKDLLQNSARALETLVSVGMRMGVSKKEILQTEL 66
             FSF     IC++  +DAI ID DLL NS R+LETLVSVGM++GVS +   ++ L
Sbjct:   582 FSFGGSTVICVFE-KDAIGIDNDLLVNSGRSLETLVSVGMQLGVSTRTFARSTL 634


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.135   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       76        76   0.00091  102 3  11 22  0.42    28
                                                     29  0.48    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  488 (52 KB)
  Total size of DFA:  88 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.83u 0.12s 8.95t   Elapsed:  00:00:00
  Total cpu time:  8.83u 0.12s 8.95t   Elapsed:  00:00:00
  Start:  Fri May 10 04:50:30 2013   End:  Fri May 10 04:50:30 2013

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