Query 035021
Match_columns 76
No_of_seqs 115 out of 292
Neff 3.5
Searched_HMMs 13730
Date Mon Mar 25 13:59:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035021.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035021hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ppya_ b.52.2.1 (A:) Pyruvoyl 40.1 4.4 0.00032 25.6 1.0 26 27-52 23-63 (118)
2 d1e5ma2 c.95.1.1 (A:256-416) B 34.8 11 0.00083 23.0 2.3 15 11-25 144-158 (161)
3 d1j3na2 c.95.1.1 (A:250-408) B 33.3 11 0.00083 22.9 2.1 15 11-25 143-157 (159)
4 g1uhe.1 b.52.2.1 (B:,A:) Pyruv 33.1 6.5 0.00048 24.8 0.9 26 27-53 23-63 (121)
5 d1sdwa1 b.121.1.2 (A:45-198) P 31.7 26 0.0019 21.4 3.8 28 2-30 62-102 (154)
6 d1nuwa_ e.7.1.1 (A:) Fructose- 31.1 23 0.0016 24.9 3.7 26 9-35 154-182 (328)
7 d1ox0a2 c.95.1.1 (A:252-409) B 29.4 16 0.0012 22.3 2.3 14 12-25 142-155 (158)
8 d2ix4a2 c.95.1.1 (A:301-461) B 27.7 18 0.0013 22.0 2.3 14 12-25 146-159 (161)
9 d2vbaa2 c.95.1.1 (A:254-404) B 27.5 18 0.0013 21.9 2.3 16 10-25 134-149 (151)
10 d1d9qa_ e.7.1.1 (A:) Fructose- 25.4 21 0.0016 25.0 2.7 27 9-36 169-198 (340)
11 d2gfva2 c.95.1.1 (A:252-412) B 23.9 21 0.0015 21.6 2.1 14 12-25 146-159 (161)
12 d2iafa1 d.81.2.1 (A:4-148) L-s 23.7 24 0.0017 22.0 2.4 16 6-21 123-138 (145)
13 d1jcea2 c.55.1.1 (A:141-336) P 23.6 45 0.0033 19.1 3.6 23 13-36 12-35 (196)
14 d1qlwa_ c.69.1.15 (A:) A novel 21.8 35 0.0025 20.1 2.8 16 5-20 9-24 (318)
15 d1poib_ c.124.1.3 (B:) Glutaco 21.2 38 0.0027 22.5 3.2 37 4-41 187-224 (260)
16 d2cdqa1 c.73.1.3 (A:25-328) As 21.1 10 0.00073 25.7 0.1 8 13-20 7-14 (304)
No 1
>d1ppya_ b.52.2.1 (A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Escherichia coli [TaxId: 562]}
Probab=40.08 E-value=4.4 Score=25.58 Aligned_cols=26 Identities=19% Similarity=0.366 Sum_probs=19.0
Q ss_pred CCeEEEchhhHhhcc---------------cceeEEEEecc
Q 035021 27 QDAIQIDKDLLQNSA---------------RALETLVSVGM 52 (76)
Q Consensus 27 k~~I~~D~DLl~nS~---------------~giET~VkmGe 52 (76)
.|.|.+|+||++.+. ..+||+|-.|+
T Consensus 23 eGSitID~~Lm~aagi~~~EkV~V~Nv~NG~Rf~TYvI~g~ 63 (118)
T d1ppya_ 23 EGSCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAE 63 (118)
T ss_dssp TTSEEEEHHHHHHHTCCTTCEEEEEETTTCCEEEEEEEEEC
T ss_pred eEEEEECHHHHHHcCCCCCCEEEEEECCCCcEEEEEEEEcC
Confidence 578999999998654 45666666665
No 2
>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}
Probab=34.80 E-value=11 Score=23.00 Aligned_cols=15 Identities=13% Similarity=-0.013 Sum_probs=12.7
Q ss_pred eeeeeCCeeEEEEEe
Q 035021 11 TASTFSFLNYICLWV 25 (76)
Q Consensus 11 GyF~FGGSTVIlLfe 25 (76)
--|-|||+..-++++
T Consensus 144 nsfGfGG~Na~lvl~ 158 (161)
T d1e5ma2 144 NSFGFGGHNVTLAFK 158 (161)
T ss_dssp EEEETTTEEEEEEEE
T ss_pred eCcCcCcEeEEEEEe
Confidence 458999999888887
No 3
>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}
Probab=33.30 E-value=11 Score=22.88 Aligned_cols=15 Identities=13% Similarity=0.082 Sum_probs=12.8
Q ss_pred eeeeeCCeeEEEEEe
Q 035021 11 TASTFSFLNYICLWV 25 (76)
Q Consensus 11 GyF~FGGSTVIlLfe 25 (76)
--|-|||+..-++++
T Consensus 143 ~sfGfgG~Na~~vl~ 157 (159)
T d1j3na2 143 NSFAFGGHNAVLAFK 157 (159)
T ss_dssp EEECTTSEEEEEEEE
T ss_pred eCCCCCceeEEEEEE
Confidence 358999999998888
No 4
>g1uhe.1 b.52.2.1 (B:,A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Helicobacter pylori [TaxId: 210]}
Probab=33.05 E-value=6.5 Score=24.79 Aligned_cols=26 Identities=31% Similarity=0.445 Sum_probs=19.8
Q ss_pred CCeEEEchhhHhhcc---------------cceeEEEEecce
Q 035021 27 QDAIQIDKDLLQNSA---------------RALETLVSVGMR 53 (76)
Q Consensus 27 k~~I~~D~DLl~nS~---------------~giET~VkmGe~ 53 (76)
.| |.+|+||++.+. ..+||+|-.|++
T Consensus 23 eG-itID~~Ll~aa~i~p~E~V~V~N~~NG~Rf~TYvI~g~~ 63 (121)
T g1uhe.1 23 IG-ITIDEDLAKLAKLREGMKVEIVDVNNGERFSTYVILGKK 63 (121)
T ss_dssp CC-CEEEHHHHHHTTCCTTCEEEEEETTTCCEEEEECEEECS
T ss_pred eE-EEECHHHHHHcCCCCCCEEEEEECCCCeEEEeEEEecCC
Confidence 47 999999998643 467777777776
No 5
>d1sdwa1 b.121.1.2 (A:45-198) Peptidylglycine alpha-hydroxylating monooxygenase, PHM {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=31.75 E-value=26 Score=21.42 Aligned_cols=28 Identities=18% Similarity=0.284 Sum_probs=18.2
Q ss_pred ceeEEEEee--------eeeee-----CCeeEEEEEeeCCeE
Q 035021 2 YHHVIIYVM--------TASTF-----SFLNYICLWVLQDAI 30 (76)
Q Consensus 2 ~~~~~~~~~--------GyF~F-----GGSTVIlLfe~k~~I 30 (76)
-||+++|.- ||..+ +++.+|-.|- +|..
T Consensus 62 VHH~lly~~~~~~~~~~~~~~~~~~~~~~~~~l~~Wa-pG~~ 102 (154)
T d1sdwa1 62 VHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWA-RNAP 102 (154)
T ss_dssp EEEEEEEEESSBSCCSSSEEGGGCSBSSCCEEEEEEE-TTBC
T ss_pred eEEEEEEEcCCCCCCCCCcccCCCccCCCCceEEEEe-CCCC
Confidence 499999974 44433 3566777777 6543
No 6
>d1nuwa_ e.7.1.1 (A:) Fructose-1,6-bisphosphatase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=31.08 E-value=23 Score=24.93 Aligned_cols=26 Identities=8% Similarity=0.161 Sum_probs=19.8
Q ss_pred eeeeeeeCCeeEEEEEeeCCeE---EEchh
Q 035021 9 VMTASTFSFLNYICLWVLQDAI---QIDKD 35 (76)
Q Consensus 9 ~~GyF~FGGSTVIlLfe~k~~I---~~D~D 35 (76)
.-||+-||-||+.++-- .+.+ .+|++
T Consensus 154 AAGY~lYGpsT~lv~t~-g~gv~~FtlD~~ 182 (328)
T d1nuwa_ 154 AAGYALYGSATMLVLAM-VNGVNCFMLDPA 182 (328)
T ss_dssp EEEEEEESSSEEEEEEE-TTEEEEEEEETT
T ss_pred eeeeEEEecceEEEEEE-CCcEeEEEEcCC
Confidence 46999999999988887 6655 45554
No 7
>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]}
Probab=29.40 E-value=16 Score=22.27 Aligned_cols=14 Identities=14% Similarity=0.024 Sum_probs=12.4
Q ss_pred eeeeCCeeEEEEEe
Q 035021 12 ASTFSFLNYICLWV 25 (76)
Q Consensus 12 yF~FGGSTVIlLfe 25 (76)
-|-|||+..-++++
T Consensus 142 sfGfGG~Na~lvl~ 155 (158)
T d1ox0a2 142 TFGFGGHNAVLAFK 155 (158)
T ss_dssp EEETTTEEEEEEEE
T ss_pred CcCCCcEeEEEEEE
Confidence 58899999998888
No 8
>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}
Probab=27.72 E-value=18 Score=21.99 Aligned_cols=14 Identities=21% Similarity=0.100 Sum_probs=12.4
Q ss_pred eeeeCCeeEEEEEe
Q 035021 12 ASTFSFLNYICLWV 25 (76)
Q Consensus 12 yF~FGGSTVIlLfe 25 (76)
-|-|||+..-++++
T Consensus 146 sfGfgG~Na~lvl~ 159 (161)
T d2ix4a2 146 SFGFGGTNASLLFA 159 (161)
T ss_dssp EEETTTEEEEEEEE
T ss_pred CCcccceeEEEEEE
Confidence 58999999988887
No 9
>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}
Probab=27.55 E-value=18 Score=21.90 Aligned_cols=16 Identities=13% Similarity=-0.091 Sum_probs=13.6
Q ss_pred eeeeeeCCeeEEEEEe
Q 035021 10 MTASTFSFLNYICLWV 25 (76)
Q Consensus 10 ~GyF~FGGSTVIlLfe 25 (76)
.--|-|||+..-++++
T Consensus 134 ~nsfGfGG~Na~~vl~ 149 (151)
T d2vbaa2 134 SNSFGFGGTNATLVMR 149 (151)
T ss_dssp EEEEETTTEEEEEEEE
T ss_pred EeCCcccceeEEEEEE
Confidence 3469999999999988
No 10
>d1d9qa_ e.7.1.1 (A:) Fructose-1,6-bisphosphatase {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=25.37 E-value=21 Score=24.99 Aligned_cols=27 Identities=11% Similarity=0.073 Sum_probs=19.8
Q ss_pred eeeeeeeCCeeEEEEEeeCCeE---EEchhh
Q 035021 9 VMTASTFSFLNYICLWVLQDAI---QIDKDL 36 (76)
Q Consensus 9 ~~GyF~FGGSTVIlLfe~k~~I---~~D~DL 36 (76)
.-||+-||-||++++-- .+.+ .+|++.
T Consensus 169 aAGY~lYG~sT~lv~t~-g~gv~~FtlD~~~ 198 (340)
T d1d9qa_ 169 AAGYCMYSSSVIFVLTI-GKGVFVFTLDPLY 198 (340)
T ss_dssp EEEEEEESSSEEEEEES-SSCCEEEEEETTT
T ss_pred EEEEEEECCceEEEEEE-CCCEEEEEEcCCC
Confidence 45999998888888876 5433 577654
No 11
>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}
Probab=23.91 E-value=21 Score=21.56 Aligned_cols=14 Identities=14% Similarity=-0.014 Sum_probs=12.3
Q ss_pred eeeeCCeeEEEEEe
Q 035021 12 ASTFSFLNYICLWV 25 (76)
Q Consensus 12 yF~FGGSTVIlLfe 25 (76)
-|-|||+..-++++
T Consensus 146 sfGfgG~Na~lil~ 159 (161)
T d2gfva2 146 SFGFGGTNGSLIFK 159 (161)
T ss_dssp EEEGGGEEEEEEEE
T ss_pred CcCccceeEEEEEE
Confidence 58999999988887
No 12
>d2iafa1 d.81.2.1 (A:4-148) L-serine dehydratase SdhL, N-terminal domain {Legionella pneumophila [TaxId: 446]}
Probab=23.70 E-value=24 Score=21.97 Aligned_cols=16 Identities=0% Similarity=-0.272 Sum_probs=14.0
Q ss_pred EEEeeeeeeeCCeeEE
Q 035021 6 IIYVMTASTFSFLNYI 21 (76)
Q Consensus 6 ~~~~~GyF~FGGSTVI 21 (76)
++++.-||+-||..|+
T Consensus 123 ~l~~~tyySIGGGFI~ 138 (145)
T d2iafa1 123 LLIEQVYYSIGGGFIT 138 (145)
T ss_dssp EEEEEEEEECSSSCEE
T ss_pred EEEEEEEEEcCCeEEe
Confidence 5688999999999986
No 13
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]}
Probab=23.61 E-value=45 Score=19.08 Aligned_cols=23 Identities=4% Similarity=-0.113 Sum_probs=15.1
Q ss_pred eeeCCe-eEEEEEeeCCeEEEchhh
Q 035021 13 STFSFL-NYICLWVLQDAIQIDKDL 36 (76)
Q Consensus 13 F~FGGS-TVIlLfe~k~~I~~D~DL 36 (76)
|-|||+ |=|.+++ .+.+.++..+
T Consensus 12 ~DiGGGT~Dvsi~~-~g~~~~~~~~ 35 (196)
T d1jcea2 12 VDIGGGTTEVAVIS-LGSIVTWESI 35 (196)
T ss_dssp EEECSSCEEEEEEE-TTEEEEEEEE
T ss_pred EEcCCCcEEEEEEE-cCCEeEEeee
Confidence 345555 4678888 7877776543
No 14
>d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]}
Probab=21.80 E-value=35 Score=20.15 Aligned_cols=16 Identities=0% Similarity=-0.268 Sum_probs=12.3
Q ss_pred EEEEeeeeeeeCCeeE
Q 035021 5 VIIYVMTASTFSFLNY 20 (76)
Q Consensus 5 ~~~~~~GyF~FGGSTV 20 (76)
+.+.+.|.|..||+.+
T Consensus 9 ~~l~~~g~f~~gg~~~ 24 (318)
T d1qlwa_ 9 LTLSGQGSFFVGGRDV 24 (318)
T ss_dssp EEEEEEEEEEECCEEE
T ss_pred ceEcccCceeecceec
Confidence 4567899999988654
No 15
>d1poib_ c.124.1.3 (B:) Glutaconate:CoA transferase beta {Acidaminococcus fermentans [TaxId: 905]}
Probab=21.21 E-value=38 Score=22.46 Aligned_cols=37 Identities=14% Similarity=0.148 Sum_probs=23.8
Q ss_pred eEEEEeeeeeeeCCeeE-EEEEeeCCeEEEchhhHhhcc
Q 035021 4 HVIIYVMTASTFSFLNY-ICLWVLQDAIQIDKDLLQNSA 41 (76)
Q Consensus 4 ~~~~~~~GyF~FGGSTV-IlLfe~k~~I~~D~DLl~nS~ 41 (76)
+.+|.+++.|+|...+= +.|-+.---+.+| |+++|+.
T Consensus 187 ~~vVT~l~Vf~f~~~~~~l~L~ei~PGvt~e-dV~~~tg 224 (260)
T d1poib_ 187 QLVVTDKGILKFDEKTKRMYLAAYYPTSSPE-DVLENTG 224 (260)
T ss_dssp EEEEETTEEEEECTTTCCEEEEEECTTCCHH-HHHHTCS
T ss_pred ceEEeccEEEEEeCCCCeEEEEEeCCCCCHH-HHHHhcC
Confidence 56899999999954331 2222323346676 9999865
No 16
>d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.07 E-value=10 Score=25.68 Aligned_cols=8 Identities=13% Similarity=-0.056 Sum_probs=6.8
Q ss_pred eeeCCeeE
Q 035021 13 STFSFLNY 20 (76)
Q Consensus 13 F~FGGSTV 20 (76)
+.||||++
T Consensus 7 ~KFGGTSv 14 (304)
T d2cdqa1 7 MKFGGSSV 14 (304)
T ss_dssp EEECTGGG
T ss_pred EeeCcccc
Confidence 68999986
Done!