Query 035051
Match_columns 75
No_of_seqs 21 out of 23
Neff 2.3
Searched_HMMs 13730
Date Mon Mar 25 14:25:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035051.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035051hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2csfa1 a.35.1.7 (A:8-95) DNA- 40.3 7.7 0.00056 23.4 2.1 33 15-47 44-78 (88)
2 d2pila_ d.24.1.1 (A:) Pilin Gc 36.5 29 0.0021 18.6 6.2 17 29-45 34-50 (158)
3 d1v9sa1 c.61.1.1 (A:1-208) Ura 35.4 11 0.00078 24.5 2.3 25 21-45 18-42 (208)
4 d1xtta1 c.61.1.1 (A:2-216) Ura 34.3 12 0.00087 24.4 2.5 25 21-45 17-41 (215)
5 d1o5oa_ c.61.1.1 (A:) Uracil P 32.8 12 0.00091 24.2 2.3 25 21-45 20-44 (210)
6 d1bd3a_ c.61.1.1 (A:) Uracil P 32.5 13 0.00096 24.5 2.5 26 21-46 32-57 (224)
7 d1i5ea_ c.61.1.1 (A:) Uracil P 32.5 12 0.00091 24.3 2.3 25 21-45 18-42 (208)
8 d2rera1 d.129.3.6 (A:1-155) Mu 32.5 21 0.0015 19.4 3.0 19 29-47 131-149 (155)
9 d1q90m_ f.23.25.1 (M:) PetM su 32.1 25 0.0018 18.1 3.1 22 2-23 9-30 (34)
10 d1i96v_ d.68.1.1 (V:) Translat 30.8 9 0.00066 22.1 1.2 16 31-46 16-31 (86)
11 d1u5pa1 a.7.1.1 (A:1662-1771) 29.5 17 0.0012 19.4 2.2 17 29-45 5-21 (110)
12 d2ifea_ d.68.1.1 (A:) Translat 26.9 12 0.00086 21.9 1.3 16 31-46 18-33 (91)
13 d3bzka3 a.294.1.1 (A:1-324) Tr 26.0 23 0.0017 24.0 2.9 19 20-38 297-320 (324)
14 d1tiga_ d.68.1.1 (A:) Translat 25.8 13 0.00093 21.5 1.3 16 31-46 17-32 (88)
15 d1s7ea2 a.35.1.7 (A:6-85) Hepa 24.9 16 0.0012 21.3 1.7 15 31-45 53-67 (80)
16 d1cs8a_ d.3.1.1 (A:) (Pro)cath 24.2 19 0.0014 23.4 2.1 16 29-44 33-48 (316)
17 d2f1ka1 a.100.1.12 (A:166-279) 24.2 38 0.0028 19.6 3.3 24 22-45 70-93 (114)
18 d1xkga1 d.3.1.1 (A:4-305) Majo 23.6 20 0.0015 23.3 2.1 14 28-41 26-39 (302)
19 d2cbia1 a.246.1.1 (A:496-624) 23.3 43 0.0031 20.4 3.5 25 21-45 34-63 (129)
20 d1wh6a_ a.35.1.7 (A:) Homeobox 23.3 21 0.0015 21.8 2.0 17 30-46 68-84 (101)
21 d2oi6a2 c.68.1.5 (A:4-251) N-a 22.5 43 0.0031 19.3 3.3 22 21-44 226-247 (248)
22 d1s35a2 a.7.1.1 (A:1169-1273) 22.3 28 0.002 18.5 2.2 18 30-47 4-21 (105)
23 d1ud0a_ a.8.4.1 (A:) DnaK {Rat 21.3 42 0.0031 18.3 3.0 35 30-65 33-67 (84)
24 d1wh8a_ a.35.1.7 (A:) Homeobox 21.1 19 0.0014 22.4 1.5 18 30-47 78-95 (111)
25 d1bgfa_ a.90.1.1 (A:) Transcri 21.0 84 0.0061 19.1 4.7 30 18-47 78-115 (124)
26 d2o4aa1 a.35.1.7 (A:370-452) D 20.6 28 0.002 20.5 2.1 32 16-47 36-69 (83)
No 1
>d2csfa1 a.35.1.7 (A:8-95) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.25 E-value=7.7 Score=23.37 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=22.9
Q ss_pred HHHHHHHH--hHHHhHHHHHHhHHHHHHHHHHHHH
Q 035051 15 AVVLLLRS--DVKQSASIFRRNVKHIRNWLEEEST 47 (75)
Q Consensus 15 Av~lLlrs--DVrqS~a~fRRN~rhIR~WlEEe~~ 47 (75)
.+-=|||. +-+....-.|.|.+.+++||.+...
T Consensus 44 tlSdLLrkpkp~~~~~~sg~e~~~rm~~wL~lPe~ 78 (88)
T d2csfa1 44 WLCELLRWKENPSPENRTLWENLCTIRRFLNLPQH 78 (88)
T ss_dssp HHHHHHHHCCCCCTTCHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHcCCCCcchhhHHHHHHHHHHHHHHhChHH
Confidence 34446665 5555556669999999999987533
No 2
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=36.48 E-value=29 Score=18.62 Aligned_cols=17 Identities=12% Similarity=-0.189 Sum_probs=11.4
Q ss_pred HHHHHhHHHHHHHHHHH
Q 035051 29 SIFRRNVKHIRNWLEEE 45 (75)
Q Consensus 29 a~fRRN~rhIR~WlEEe 45 (75)
.-.+.++++|+..++..
T Consensus 34 ~~~~~~l~~i~~~~~~~ 50 (158)
T d2pila_ 34 SEAILLAEGQKSAVTEY 50 (158)
T ss_dssp HHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34556777777777665
No 3
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]}
Probab=35.36 E-value=11 Score=24.51 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=22.2
Q ss_pred HHhHHHhHHHHHHhHHHHHHHHHHH
Q 035051 21 RSDVKQSASIFRRNVKHIRNWLEEE 45 (75)
Q Consensus 21 rsDVrqS~a~fRRN~rhIR~WlEEe 45 (75)
=+|..-+...||+++++|-.||-+|
T Consensus 18 LRd~~T~~~~Fr~~~~rl~~lL~ye 42 (208)
T d1v9sa1 18 LRDKRTGPKDFRELAEEVAMLMAYE 42 (208)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCChHHHHHHHHHHHHHHHHH
Confidence 3577888899999999999999997
No 4
>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]}
Probab=34.26 E-value=12 Score=24.37 Aligned_cols=25 Identities=24% Similarity=0.235 Sum_probs=22.6
Q ss_pred HHhHHHhHHHHHHhHHHHHHHHHHH
Q 035051 21 RSDVKQSASIFRRNVKHIRNWLEEE 45 (75)
Q Consensus 21 rsDVrqS~a~fRRN~rhIR~WlEEe 45 (75)
=+|..-+...||+++++|-.||-+|
T Consensus 17 LRd~~T~~~~Fr~~~~~i~~lL~~E 41 (215)
T d1xtta1 17 LRDKYTDQINFRKNLVRLGRILGYE 41 (215)
T ss_dssp HHCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3688889999999999999999887
No 5
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]}
Probab=32.76 E-value=12 Score=24.20 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=22.5
Q ss_pred HHhHHHhHHHHHHhHHHHHHHHHHH
Q 035051 21 RSDVKQSASIFRRNVKHIRNWLEEE 45 (75)
Q Consensus 21 rsDVrqS~a~fRRN~rhIR~WlEEe 45 (75)
=+|..-+..-||+++++|-.||-+|
T Consensus 20 LRd~~T~~~~Fr~~~~rl~~lL~~e 44 (210)
T d1o5oa_ 20 MRDKNTGPKEFRELLREITLLLAYE 44 (210)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCChHHHHHHHHHHHHHHHHH
Confidence 3578888999999999999999998
No 6
>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]}
Probab=32.52 E-value=13 Score=24.49 Aligned_cols=26 Identities=19% Similarity=0.134 Sum_probs=22.6
Q ss_pred HHhHHHhHHHHHHhHHHHHHHHHHHH
Q 035051 21 RSDVKQSASIFRRNVKHIRNWLEEES 46 (75)
Q Consensus 21 rsDVrqS~a~fRRN~rhIR~WlEEe~ 46 (75)
=+|..-+...||+++++|-.||-+|.
T Consensus 32 LRd~~T~~~~Fr~~~~ri~~lL~yEa 57 (224)
T d1bd3a_ 32 IRDKETPKEEFVFYADRLIRLLIEEA 57 (224)
T ss_dssp HHCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hHCCCCChHHHHHHHHHHHHHHHHHH
Confidence 35788888899999999999999973
No 7
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]}
Probab=32.50 E-value=12 Score=24.30 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=22.1
Q ss_pred HHhHHHhHHHHHHhHHHHHHHHHHH
Q 035051 21 RSDVKQSASIFRRNVKHIRNWLEEE 45 (75)
Q Consensus 21 rsDVrqS~a~fRRN~rhIR~WlEEe 45 (75)
=+|..-+...||+++..|-.||-+|
T Consensus 18 LRd~~T~~~~Fr~~~~rl~~lL~ye 42 (208)
T d1i5ea_ 18 IRDKNTGTKEFRELVDEVATLMAFE 42 (208)
T ss_dssp HHCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3577778899999999999999887
No 8
>d2rera1 d.129.3.6 (A:1-155) Multifunctional enzyme TcmN, cyclase/aromatase domain {Streptomyces glaucescens [TaxId: 1907]}
Probab=32.46 E-value=21 Score=19.44 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=15.8
Q ss_pred HHHHHhHHHHHHHHHHHHH
Q 035051 29 SIFRRNVKHIRNWLEEEST 47 (75)
Q Consensus 29 a~fRRN~rhIR~WlEEe~~ 47 (75)
+.++++|..|++.+|..+.
T Consensus 131 ~~~~~~L~~lk~~~E~~~~ 149 (155)
T d2rera1 131 TTTRANMERIKKIIEDRHR 149 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHh
Confidence 4788999999999998654
No 9
>d1q90m_ f.23.25.1 (M:) PetM subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=32.13 E-value=25 Score=18.11 Aligned_cols=22 Identities=36% Similarity=0.474 Sum_probs=17.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHh
Q 035051 2 ALTNFILTVAGVSAVVLLLRSD 23 (75)
Q Consensus 2 AlTNFilTvagV~Av~lLlrsD 23 (75)
|+|-.-+|..|++..+.|+|-.
T Consensus 9 a~tmig~tl~glaigfvllrve 30 (34)
T d1q90m_ 9 ALTMVGMTLVGLAIGFVLLRVE 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhheeeH
Confidence 5666678889999888888843
No 10
>d1i96v_ d.68.1.1 (V:) Translation initiation factor IF3, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=30.76 E-value=9 Score=22.09 Aligned_cols=16 Identities=25% Similarity=0.684 Sum_probs=12.2
Q ss_pred HHHhHHHHHHHHHHHH
Q 035051 31 FRRNVKHIRNWLEEES 46 (75)
Q Consensus 31 fRRN~rhIR~WlEEe~ 46 (75)
|..=++|++.|||++.
T Consensus 16 l~~K~k~a~~FL~~G~ 31 (86)
T d1i96v_ 16 YQTKLGHIKRFLQEGH 31 (86)
T ss_pred HHHHHHHHHHHHhcCC
Confidence 3345789999999864
No 11
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=29.48 E-value=17 Score=19.42 Aligned_cols=17 Identities=29% Similarity=0.575 Sum_probs=14.5
Q ss_pred HHHHHhHHHHHHHHHHH
Q 035051 29 SIFRRNVKHIRNWLEEE 45 (75)
Q Consensus 29 a~fRRN~rhIR~WlEEe 45 (75)
.-|.+.++.+..||+|-
T Consensus 5 q~F~~~~~el~~Wl~e~ 21 (110)
T d1u5pa1 5 QNFNTGIKDFDFWLSEV 21 (110)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 35889999999999974
No 12
>d2ifea_ d.68.1.1 (A:) Translation initiation factor IF3, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.89 E-value=12 Score=21.88 Aligned_cols=16 Identities=19% Similarity=0.520 Sum_probs=12.0
Q ss_pred HHHhHHHHHHHHHHHH
Q 035051 31 FRRNVKHIRNWLEEES 46 (75)
Q Consensus 31 fRRN~rhIR~WlEEe~ 46 (75)
|..=++|++.|||++.
T Consensus 18 l~~Klk~a~~FL~~G~ 33 (91)
T d2ifea_ 18 YQVKLRSLIRFLEEGD 33 (91)
T ss_dssp HTHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHCCC
Confidence 3445789999999863
No 13
>d3bzka3 a.294.1.1 (A:1-324) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.04 E-value=23 Score=23.98 Aligned_cols=19 Identities=26% Similarity=0.621 Sum_probs=14.4
Q ss_pred HHHhHHH-----hHHHHHHhHHHH
Q 035051 20 LRSDVKQ-----SASIFRRNVKHI 38 (75)
Q Consensus 20 lrsDVrq-----S~a~fRRN~rhI 38 (75)
+|++.+. |..+|-+|+||+
T Consensus 297 ir~~Lk~~Ae~~aI~vF~~NL~~L 320 (324)
T d3bzka3 297 LFGELRDGAEDEAISVFARNLHDL 320 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566655 668999999986
No 14
>d1tiga_ d.68.1.1 (A:) Translation initiation factor IF3, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=25.77 E-value=13 Score=21.54 Aligned_cols=16 Identities=25% Similarity=0.634 Sum_probs=12.2
Q ss_pred HHHhHHHHHHHHHHHH
Q 035051 31 FRRNVKHIRNWLEEES 46 (75)
Q Consensus 31 fRRN~rhIR~WlEEe~ 46 (75)
|..=++|++.|||++.
T Consensus 17 l~~K~k~a~~FL~~G~ 32 (88)
T d1tiga_ 17 FNTKLRNARKFLEKGD 32 (88)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 4445799999999863
No 15
>d1s7ea2 a.35.1.7 (A:6-85) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.91 E-value=16 Score=21.35 Aligned_cols=15 Identities=27% Similarity=0.634 Sum_probs=12.9
Q ss_pred HHHhHHHHHHHHHHH
Q 035051 31 FRRNVKHIRNWLEEE 45 (75)
Q Consensus 31 fRRN~rhIR~WlEEe 45 (75)
-|.|.+.+++||.+.
T Consensus 53 gre~y~RM~~wL~~p 67 (80)
T d1s7ea2 53 GRETFRRMWKWLQEP 67 (80)
T ss_dssp CHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHcCH
Confidence 388999999999874
No 16
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.18 E-value=19 Score=23.43 Aligned_cols=16 Identities=25% Similarity=0.441 Sum_probs=13.0
Q ss_pred HHHHHhHHHHHHHHHH
Q 035051 29 SIFRRNVKHIRNWLEE 44 (75)
Q Consensus 29 a~fRRN~rhIR~WlEE 44 (75)
.+|++|++.|..+=.+
T Consensus 33 ~iF~~N~~~I~~~N~~ 48 (316)
T d1cs8a_ 33 AVWEKNMKMIELHNQE 48 (316)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhH
Confidence 6899999999876443
No 17
>d2f1ka1 a.100.1.12 (A:166-279) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=24.16 E-value=38 Score=19.58 Aligned_cols=24 Identities=8% Similarity=0.278 Sum_probs=15.7
Q ss_pred HhHHHhHHHHHHhHHHHHHHHHHH
Q 035051 22 SDVKQSASIFRRNVKHIRNWLEEE 45 (75)
Q Consensus 22 sDVrqS~a~fRRN~rhIR~WlEEe 45 (75)
..|.++-..|+.++.+++..|+.+
T Consensus 70 ~~i~~~l~~~~~~L~~l~~~l~~~ 93 (114)
T d2f1ka1 70 RALLKSLQDYRQHLDQLITLISNQ 93 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 345666666777777777777654
No 18
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]}
Probab=23.57 E-value=20 Score=23.31 Aligned_cols=14 Identities=21% Similarity=0.218 Sum_probs=12.0
Q ss_pred HHHHHHhHHHHHHH
Q 035051 28 ASIFRRNVKHIRNW 41 (75)
Q Consensus 28 ~a~fRRN~rhIR~W 41 (75)
-.+|++|++.|+..
T Consensus 26 ~~if~~N~~~I~~~ 39 (302)
T d1xkga1 26 RKNFLESVKYVQSN 39 (302)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 36899999999976
No 19
>d2cbia1 a.246.1.1 (A:496-624) Hyaluronidase, post-catalytic domain 3 {Clostridium perfringens [TaxId: 1502]}
Probab=23.30 E-value=43 Score=20.41 Aligned_cols=25 Identities=12% Similarity=0.227 Sum_probs=19.1
Q ss_pred HHhHHHhHHHHHHh-----HHHHHHHHHHH
Q 035051 21 RSDVKQSASIFRRN-----VKHIRNWLEEE 45 (75)
Q Consensus 21 rsDVrqS~a~fRRN-----~rhIR~WlEEe 45 (75)
-..+..++..||.| +.+|+-||+.=
T Consensus 34 F~~i~~A~~~~r~~~~n~~l~ei~pWL~~~ 63 (129)
T d2cbia1 34 FARMEEACNNLKANLPEVALEECSRQLDEL 63 (129)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Confidence 35677778888876 58999999864
No 20
>d1wh6a_ a.35.1.7 (A:) Homeobox protein Cux-2, CUTL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.29 E-value=21 Score=21.85 Aligned_cols=17 Identities=18% Similarity=0.339 Sum_probs=13.9
Q ss_pred HHHHhHHHHHHHHHHHH
Q 035051 30 IFRRNVKHIRNWLEEES 46 (75)
Q Consensus 30 ~fRRN~rhIR~WlEEe~ 46 (75)
--|.+.+.+.+||+++-
T Consensus 68 ~gr~~y~RM~~wL~~p~ 84 (101)
T d1wh6a_ 68 KGREPFIRMQLWLSDQL 84 (101)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHhcCHh
Confidence 45788889999999974
No 21
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.52 E-value=43 Score=19.26 Aligned_cols=22 Identities=9% Similarity=0.265 Sum_probs=17.3
Q ss_pred HHhHHHhHHHHHHhHHHHHHHHHH
Q 035051 21 RSDVKQSASIFRRNVKHIRNWLEE 44 (75)
Q Consensus 21 rsDVrqS~a~fRRN~rhIR~WlEE 44 (75)
..|..+.-++||+ |..+.||+-
T Consensus 226 ~eDL~~ae~i~~~--~~~~~~~~~ 247 (248)
T d2oi6a2 226 RLQLSRLERVYQS--EQAEKLLLA 247 (248)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHT
T ss_pred HHHHHHHHHHHHH--HHHHHHHHC
Confidence 4578888899998 677888874
No 22
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.32 E-value=28 Score=18.46 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=15.0
Q ss_pred HHHHhHHHHHHHHHHHHH
Q 035051 30 IFRRNVKHIRNWLEEEST 47 (75)
Q Consensus 30 ~fRRN~rhIR~WlEEe~~ 47 (75)
-|-|.+..|-.||.+-..
T Consensus 4 ~F~~d~~~~~~Wi~~~e~ 21 (105)
T d1s35a2 4 EFQKDAKQAEAILSNQEY 21 (105)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 488999999999998643
No 23
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.28 E-value=42 Score=18.29 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=22.7
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHhhhcCcccccccC
Q 035051 30 IFRRNVKHIRNWLEEESTAASKAAENIKPKELETKI 65 (75)
Q Consensus 30 ~fRRN~rhIR~WlEEe~~aaska~~~~~pKel~~~~ 65 (75)
.+..-+..+..||++...| ++..=+.+.++|+..+
T Consensus 33 ~i~~~l~e~~~WL~~n~~a-~~ee~~~k~~eLe~~~ 67 (84)
T d1ud0a_ 33 KILDKCNEIISWLDKNQTA-EKEEFEHQQKELEKVC 67 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHHHH
Confidence 5677888999999886443 3333344666666543
No 24
>d1wh8a_ a.35.1.7 (A:) Homeobox protein Cux-2, CUTL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.11 E-value=19 Score=22.42 Aligned_cols=18 Identities=17% Similarity=0.344 Sum_probs=14.8
Q ss_pred HHHHhHHHHHHHHHHHHH
Q 035051 30 IFRRNVKHIRNWLEEEST 47 (75)
Q Consensus 30 ~fRRN~rhIR~WlEEe~~ 47 (75)
--|.|.+.+++||.++..
T Consensus 78 ~gR~~y~RM~~wL~~pe~ 95 (111)
T d1wh8a_ 78 KGREPFVRMQLWLNDPHN 95 (111)
T ss_dssp HHHHHHHHHHHHHHCTTH
T ss_pred HHHHHHHHHHHHhcCHHH
Confidence 458899999999998754
No 25
>d1bgfa_ a.90.1.1 (A:) Transcription factor STAT-4 N-domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.01 E-value=84 Score=19.07 Aligned_cols=30 Identities=30% Similarity=0.406 Sum_probs=24.5
Q ss_pred HHHHHhHHHhHHHHHHh--------HHHHHHHHHHHHH
Q 035051 18 LLLRSDVKQSASIFRRN--------VKHIRNWLEEEST 47 (75)
Q Consensus 18 lLlrsDVrqS~a~fRRN--------~rhIR~WlEEe~~ 47 (75)
+|++..+++++..|+.+ ++.|++=|++|..
T Consensus 78 fl~~~~l~~~~~~~q~~y~~nP~~L~~iI~~cL~~E~r 115 (124)
T d1bgfa_ 78 LLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERR 115 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHHHH
Confidence 45677889999988864 6889999999866
No 26
>d2o4aa1 a.35.1.7 (A:370-452) DNA-binding protein SATB1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.58 E-value=28 Score=20.46 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=21.3
Q ss_pred HHHHHHH--hHHHhHHHHHHhHHHHHHHHHHHHH
Q 035051 16 VVLLLRS--DVKQSASIFRRNVKHIRNWLEEEST 47 (75)
Q Consensus 16 v~lLlrs--DVrqS~a~fRRN~rhIR~WlEEe~~ 47 (75)
+-=|||. +-......-|.|.+.+++||.+...
T Consensus 36 lSdLL~~pkpw~~ls~sgre~f~Rm~~wL~lP~~ 69 (83)
T d2o4aa1 36 LSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEA 69 (83)
T ss_dssp HHHHHHHCCCTTSCCHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHcCCCCchhhhHHHHHHHHHHHHHHcChHH
Confidence 3345654 3334445569999999999987543
Done!