BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035053
(74 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29545|EF1B_ORYSJ Elongation factor 1-beta OS=Oryza sativa subsp. japonica
GN=Os07g0662500 PE=1 SV=3
Length = 224
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/74 (90%), Positives = 70/74 (94%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
MKKLEEAVRSV+M GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVDSLIEEHLT EP N
Sbjct: 151 MKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPIN 210
Query: 61 EYVQSCDIVAFNKI 74
E+VQSCDIVAFNKI
Sbjct: 211 EFVQSCDIVAFNKI 224
>sp|Q9SI20|EF1D2_ARATH Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110
PE=2 SV=1
Length = 231
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/74 (86%), Positives = 69/74 (93%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
MKKLEEAVRS++M GLFWGASKLVPVGYGIKKL IM TIVDDLVS+D++IEE LTVEP N
Sbjct: 158 MKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPIN 217
Query: 61 EYVQSCDIVAFNKI 74
EYVQSCDIVAFNKI
Sbjct: 218 EYVQSCDIVAFNKI 231
>sp|P48006|EF1D1_ARATH Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230
PE=2 SV=2
Length = 231
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/74 (85%), Positives = 70/74 (94%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
MKKLEEAV+S++M GLFWGASKLVPVGYGIKKLQI+ TIVDDLVS+D++IEE LTVEP N
Sbjct: 158 MKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPIN 217
Query: 61 EYVQSCDIVAFNKI 74
EYVQSCDIVAFNKI
Sbjct: 218 EYVQSCDIVAFNKI 231
>sp|Q84WM9|EF1B1_ARATH Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110
PE=2 SV=2
Length = 228
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/74 (86%), Positives = 69/74 (93%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
MKKLEEAVRSV+MPGL WGASKLVPVGYGIKKL IM+TIVDDLVSVD+LIE+HLT EP N
Sbjct: 155 MKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNN 214
Query: 61 EYVQSCDIVAFNKI 74
EY+QS DIVAFNKI
Sbjct: 215 EYIQSVDIVAFNKI 228
>sp|Q9SCX3|EF1B2_ARATH Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510
PE=1 SV=1
Length = 224
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/74 (86%), Positives = 67/74 (90%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
MKKLEEAVR VEMPGLFWGASKLVPVGYGIKKL IM TIVDDLVS D+LIE+ LT EP N
Sbjct: 151 MKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNN 210
Query: 61 EYVQSCDIVAFNKI 74
EY+QSCDIVAFNKI
Sbjct: 211 EYIQSCDIVAFNKI 224
>sp|Q40680|EF1D1_ORYSJ Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica
GN=Os07g0614500 PE=2 SV=3
Length = 229
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/74 (82%), Positives = 67/74 (90%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEEAVR+V+M GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVDSLIE++ EP N
Sbjct: 156 MTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPAN 215
Query: 61 EYVQSCDIVAFNKI 74
EY+QSCDIVAFNKI
Sbjct: 216 EYIQSCDIVAFNKI 229
>sp|P93447|EF1D_PIMBR Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3
Length = 226
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 67/74 (90%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEEAVRS++M GL WGASKLV VGYGIKKLQIM+TIVDDLVSVD L+E++LT EP N
Sbjct: 153 MTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPAN 212
Query: 61 EYVQSCDIVAFNKI 74
EY+QSCDIVAFNKI
Sbjct: 213 EYIQSCDIVAFNKI 226
>sp|Q40682|EF1D2_ORYSJ Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica
GN=Os03g0406200 PE=2 SV=3
Length = 226
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 67/74 (90%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEEAVR+V+M GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVDSLIE++ EP N
Sbjct: 153 MAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPAN 212
Query: 61 EYVQSCDIVAFNKI 74
E++QSCDIVAFNKI
Sbjct: 213 EFIQSCDIVAFNKI 226
>sp|O81918|EF1D_BETVU Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3
Length = 231
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/74 (85%), Positives = 68/74 (91%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
MKKLEEAVRSV+ GL GASKLVPVGYGIKKL IM+TIVDDLVSVD+LIE++LTVEP N
Sbjct: 158 MKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPIN 217
Query: 61 EYVQSCDIVAFNKI 74
EYVQSCDIVAFNKI
Sbjct: 218 EYVQSCDIVAFNKI 231
>sp|P29546|EF1B_WHEAT Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2
Length = 216
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 63/74 (85%), Gaps = 2/74 (2%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
MKKLEEAVRSV+M GL WGASKL+PVGYGIKKLQIM+TI+DDL S + IEE L P N
Sbjct: 145 MKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDDLAS--TPIEEVLCEAPIN 202
Query: 61 EYVQSCDIVAFNKI 74
EYVQSCDIVAFNKI
Sbjct: 203 EYVQSCDIVAFNKI 216
>sp|P29522|EF1B2_BOMMO Elongation factor 1-beta' OS=Bombyx mori PE=1 SV=2
Length = 222
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
MK++E VR++EM GL WGASKLVPVGYGI KLQIM I DD VSVD L E+ ++
Sbjct: 152 MKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEK---IQEFE 208
Query: 61 EYVQSCDIVAFNKI 74
++VQS DI AFNKI
Sbjct: 209 DFVQSVDIAAFNKI 222
>sp|O96827|EF1B_DROME Probable elongation factor 1-beta OS=Drosophila melanogaster
GN=Ef1beta PE=1 SV=3
Length = 222
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
MK++E VR++EM GL WGASKLVPVGYGI KLQIM I DD VS+D L E+ +E
Sbjct: 152 MKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEK---IEEFE 208
Query: 61 EYVQSCDIVAFNKI 74
++VQS DI AFNKI
Sbjct: 209 DFVQSVDIAAFNKI 222
>sp|P29693|EF1D_XENLA Elongation factor 1-delta OS=Xenopus laevis GN=eef1d PE=1 SV=1
Length = 265
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEE VR+V+M GL WG+SKLVPVGYGIKKLQI + DD V D ++EE +T
Sbjct: 195 MAKLEECVRTVQMDGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD-ILEEEIT--KFE 251
Query: 61 EYVQSCDIVAFNKI 74
+YVQS DI AFNKI
Sbjct: 252 DYVQSVDIAAFNKI 265
>sp|Q5E983|EF1B_BOVIN Elongation factor 1-beta OS=Bos taurus GN=EEF1B PE=2 SV=3
Length = 225
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEE VRS++ GL WG+SKLVPVGYGIKKLQI + DD V D ++EE +T +
Sbjct: 155 MAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQITA--FD 211
Query: 61 EYVQSCDIVAFNKI 74
EYVQS D+ AFNKI
Sbjct: 212 EYVQSMDVAAFNKI 225
>sp|Q6DET9|EF1B_XENTR Elongation factor 1-beta OS=Xenopus tropicalis GN=eef1b PE=2 SV=3
Length = 228
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEE VRS++M GL WGASKLVPVGYGIKKLQI + DD V D ++EE++T
Sbjct: 158 MAKLEECVRSIQMEGLVWGASKLVPVGYGIKKLQIQCVVEDDKVGTD-VLEENITA--FE 214
Query: 61 EYVQSCDIVAFNKI 74
++VQS D+ AFNKI
Sbjct: 215 DFVQSMDVAAFNKI 228
>sp|P32192|EF1D_ARTSA Elongation factor 1-delta OS=Artemia salina PE=1 SV=2
Length = 237
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M +E VRS+ M GL WGASKLVPV +G+KKLQI + DD VSVD L+E+ +E
Sbjct: 167 MGAMEREVRSIAMDGLIWGASKLVPVAFGVKKLQISCVVEDDKVSVDELVEK---IEAFE 223
Query: 61 EYVQSCDIVAFNKI 74
+YVQS DI AFNKI
Sbjct: 224 DYVQSVDIAAFNKI 237
>sp|Q9YGQ1|EF1B_CHICK Elongation factor 1-beta OS=Gallus gallus GN=EEF1B PE=2 SV=3
Length = 225
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEE VRS++ GL WG+SKLVPVGYGIKKLQI + DD V D ++EE +T
Sbjct: 155 MAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQITA--FE 211
Query: 61 EYVQSCDIVAFNKI 74
+YVQS D+ AFNKI
Sbjct: 212 DYVQSMDVAAFNKI 225
>sp|P24534|EF1B_HUMAN Elongation factor 1-beta OS=Homo sapiens GN=EEF1B2 PE=1 SV=3
Length = 225
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEE VRS++ GL WG+SKLVPVGYGIKKLQI + DD V D ++EE +T
Sbjct: 155 MAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQITA--FE 211
Query: 61 EYVQSCDIVAFNKI 74
+YVQS D+ AFNKI
Sbjct: 212 DYVQSMDVAAFNKI 225
>sp|O70251|EF1B_MOUSE Elongation factor 1-beta OS=Mus musculus GN=Eef1b PE=1 SV=5
Length = 225
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEE VRS++ GL WG+SKLVPVGYGIKKLQI + DD V D ++EE +T
Sbjct: 155 MTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQITA--FE 211
Query: 61 EYVQSCDIVAFNKI 74
+YVQS D+ AFNKI
Sbjct: 212 DYVQSMDVAAFNKI 225
>sp|P30151|EF1B_XENLA Elongation factor 1-beta OS=Xenopus laevis GN=eef1b PE=1 SV=3
Length = 227
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEE +RS++M GL WG+SKLVPVGYGIKKLQI + DD V D ++EE +T
Sbjct: 157 MGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD-VLEEKITA--FE 213
Query: 61 EYVQSCDIVAFNKI 74
++VQS D+ AFNKI
Sbjct: 214 DFVQSMDVAAFNKI 227
>sp|P34826|EF1B_RABIT Elongation factor 1-beta OS=Oryctolagus cuniculus GN=EEF1B PE=1
SV=2
Length = 225
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEE VRS++ GL WG+SKLVPVGYGIKKLQI + DD V D ++EE +T
Sbjct: 155 MVKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQITA--FE 211
Query: 61 EYVQSCDIVAFNKI 74
+YVQS D+ AFNKI
Sbjct: 212 DYVQSMDVAAFNKI 225
>sp|P53787|EF1D_RABIT Elongation factor 1-delta OS=Oryctolagus cuniculus GN=EEF1D PE=2
SV=1
Length = 280
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M +LE VRSV++ GL WGASKLVPVGYGI+KLQI + DD V D L+EE +T
Sbjct: 210 MARLEACVRSVQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEIT--KFE 266
Query: 61 EYVQSCDIVAFNKI 74
E+VQS DI AFNKI
Sbjct: 267 EHVQSVDIAAFNKI 280
>sp|Q4R3D4|EF1D_MACFA Elongation factor 1-delta OS=Macaca fascicularis GN=EEF1D PE=2 SV=2
Length = 281
Score = 83.2 bits (204), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M +LE VRS+++ GL WGASKLVPVGYGI+KLQI + DD V D L+EE +T
Sbjct: 211 MAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEIT--KFE 267
Query: 61 EYVQSCDIVAFNKI 74
E+VQS DI AFNKI
Sbjct: 268 EHVQSVDIAAFNKI 281
>sp|Q68FR9|EF1D_RAT Elongation factor 1-delta OS=Rattus norvegicus GN=Eef1d PE=1 SV=2
Length = 281
Score = 82.8 bits (203), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M +LE VRS+++ GL WGASKLVPVGYGI+KLQI + DD V D L+EE +T
Sbjct: 211 MAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEIT--KFE 267
Query: 61 EYVQSCDIVAFNKI 74
E+VQS DI AFNKI
Sbjct: 268 EHVQSVDIAAFNKI 281
>sp|P29692|EF1D_HUMAN Elongation factor 1-delta OS=Homo sapiens GN=EEF1D PE=1 SV=5
Length = 281
Score = 82.8 bits (203), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M +LE VRS+++ GL WGASKLVPVGYGI+KLQI + DD V D L+EE +T
Sbjct: 211 MAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEIT--KFE 267
Query: 61 EYVQSCDIVAFNKI 74
E+VQS DI AFNKI
Sbjct: 268 EHVQSVDIAAFNKI 281
>sp|Q9U2H9|EF1B2_CAEEL Probable elongation factor 1-beta/1-delta 2 OS=Caenorhabditis
elegans GN=Y41E3.10 PE=1 SV=4
Length = 263
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDL-VSVDSLIEEHLTVEPC 59
+ ++E+ VRS+EM GL WG +KL+P+GYGIKKLQI IT+++DL VSVD LIE+
Sbjct: 192 LGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQI-ITVIEDLKVSVDDLIEK--ITGDF 248
Query: 60 NEYVQSCDIVAFNKI 74
++VQS DIVAFNKI
Sbjct: 249 EDHVQSVDIVAFNKI 263
>sp|A5D989|EF1D_BOVIN Elongation factor 1-delta OS=Bos taurus GN=EEF1D PE=2 SV=2
Length = 280
Score = 82.8 bits (203), Expect = 6e-16, Method: Composition-based stats.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M +LE VRSV++ GL WG+SKLVPVGYGI+KLQI + DD V D L EE E
Sbjct: 210 MAQLEACVRSVQLDGLVWGSSKLVPVGYGIRKLQIQCVVEDDKVGTDQLEEEITKFE--- 266
Query: 61 EYVQSCDIVAFNKI 74
E+VQS DI AFNKI
Sbjct: 267 EHVQSVDIAAFNKI 280
>sp|P34460|EF1B1_CAEEL Probable elongation factor 1-beta/1-delta 1 OS=Caenorhabditis
elegans GN=F54H12.6 PE=1 SV=1
Length = 213
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDL-VSVDSLIEEHLTVEPC 59
+ ++E+ VRS+EM GL WG +KL+P+GYGIKKLQI IT+++DL VSVD LIE+
Sbjct: 142 LGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQI-ITVIEDLKVSVDDLIEK--ITGDF 198
Query: 60 NEYVQSCDIVAFNKI 74
++VQS DIVAFNKI
Sbjct: 199 EDHVQSVDIVAFNKI 213
>sp|P57776|EF1D_MOUSE Elongation factor 1-delta OS=Mus musculus GN=Eef1d PE=1 SV=3
Length = 281
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/74 (58%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M +LE VRS+++ GL WGASKLVPVGYGI+KLQI + DD V D L+EE +T
Sbjct: 211 MAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEIT--KFE 267
Query: 61 EYVQSCDIVAFNKI 74
E+VQS DI AF+KI
Sbjct: 268 EHVQSVDIAAFDKI 281
>sp|P12262|EF1B_ARTSA Elongation factor 1-beta OS=Artemia salina PE=1 SV=3
Length = 207
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M ++E+ VRSV+M GL WGA+KL+P+ YGIKKL IM + DD VS+D L E+ +
Sbjct: 137 MAEMEKLVRSVQMDGLVWGAAKLIPLAYGIKKLSIMCVVEDDKVSIDELQEK---ISEFE 193
Query: 61 EYVQSCDIVAFNKI 74
++VQS DI AFNK+
Sbjct: 194 DFVQSVDIAAFNKV 207
>sp|O74173|EF1B_SCHPO Elongation factor 1-beta OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=tef5 PE=2 SV=1
Length = 214
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M +LE+AVRS++M GL WG SKLVPVG+G+ K QI + + DD VS+++L EE +E
Sbjct: 144 MDELEKAVRSIQMDGLVWGLSKLVPVGFGVNKFQINLVVEDDKVSLEALQEE---LEGFE 200
Query: 61 EYVQSCDIVAFNKI 74
+YVQS DI A +K+
Sbjct: 201 DYVQSTDIAAMSKL 214
>sp|Q9GRF8|EF1B_DICDI Elongation factor 1-beta OS=Dictyostelium discoideum GN=efa1B PE=1
SV=1
Length = 216
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M +LE+ VRS+EM GL WGASKLV VGYGIKKL I + + D VS D L E+ ++
Sbjct: 146 MVELEKCVRSIEMDGLVWGASKLVAVGYGIKKLVINLVVEDLKVSTDELEEK---IKDFE 202
Query: 61 EYVQSCDIVAFNKI 74
+YVQS D+ AFNKI
Sbjct: 203 DYVQSVDVAAFNKI 216
>sp|Q9VL18|EF1D_DROME Probable elongation factor 1-delta OS=Drosophila melanogaster
GN=eEF1delta PE=1 SV=1
Length = 256
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
+K +E +R + GL WGASK VPV +GI+KL I + DD VS+D L EE +E
Sbjct: 186 LKVMETEIRKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEE---IEKLE 242
Query: 61 EYVQSCDIVAFNKI 74
++VQS DI AFNKI
Sbjct: 243 DFVQSVDIAAFNKI 256
>sp|Q717R8|EF1D_SHEEP Elongation factor 1-delta OS=Ovis aries GN=EEF1D PE=2 SV=1
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/74 (52%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M +LE VRSV++ GL WG+SKLVPVGYGI+KLQI + +E VE
Sbjct: 210 MAQLEACVRSVQLDGLVWGSSKLVPVGYGIRKLQIQCVVE---CRWGRPLERSHQVE--- 263
Query: 61 EYVQSCDIVAFNKI 74
E+VQS DI AFNKI
Sbjct: 264 EHVQSVDIAAFNKI 277
>sp|P78590|EF1B_CANAW Elongation factor 1-beta OS=Candida albicans (strain WO-1) GN=EFB1
PE=1 SV=1
Length = 213
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 8 VRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCNEYVQSCD 67
V+++EM GL WGA + +PVG+GIKKLQI + + D LVS+D L VE ++VQS D
Sbjct: 150 VKAIEMEGLTWGAHQWIPVGFGIKKLQINLVVEDALVSLDDL---QAAVEEDEDHVQSTD 206
Query: 68 IVAFNKI 74
I A K+
Sbjct: 207 IAAMQKL 213
>sp|P32471|EF1B_YEAST Elongation factor 1-beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=EFB1 PE=1 SV=4
Length = 206
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 8 VRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCNEYVQSCD 67
V+++EM GL WGA + +P+G+GIKKLQI + DD VS+D L + ++E ++VQS D
Sbjct: 143 VKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQ---SIEEDEDHVQSTD 199
Query: 68 IVAFNKI 74
I A K+
Sbjct: 200 IAAMQKL 206
>sp|P34827|EF1B_TRYCR 25 kDa elongation factor 1-beta OS=Trypanosoma cruzi PE=2 SV=1
Length = 222
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
++ L + +V+ GL WG KLVPV +G+KKLQ +I I DD V D L E ++ E
Sbjct: 152 LQALANKLHAVKRDGLLWGDHKLVPVAFGVKKLQQLIVIEDDKVLSDDLEELIMSFE--- 208
Query: 61 EYVQSCDIVAFNKI 74
+ VQS DIVA+NKI
Sbjct: 209 DEVQSMDIVAWNKI 222
>sp|P29412|EF1B_PIG Elongation factor 1-beta OS=Sus scrofa GN=EEF1B PE=1 SV=1
Length = 224
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTVEPCN 60
M KLEE V S++ GL LVPVGYGIK DD V D ++EE +T
Sbjct: 154 MAKLEEXVXSIQADGLVXXXXXLVPVGYGIKXXXXXXXXXDDKVGTD-MLEEQITA--FE 210
Query: 61 EYVQSCDIVAFNKI 74
+YVQS D+ AFNKI
Sbjct: 211 DYVQSMDVAAFNKI 224
>sp|Q04538|POLG_POWVL Genome polyprotein OS=Tick-borne powassan virus (strain LB) PE=3 SV=1
Length = 3415
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 4 LEEAVRSVEMPGLFWGASKLVPVGYGIK 31
++E V + PGLFWG + + VGYG K
Sbjct: 1509 IKEGVYRIYAPGLFWGYRQ-IGVGYGTK 1535
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,398,413
Number of Sequences: 539616
Number of extensions: 771974
Number of successful extensions: 1912
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1848
Number of HSP's gapped (non-prelim): 42
length of query: 74
length of database: 191,569,459
effective HSP length: 45
effective length of query: 29
effective length of database: 167,286,739
effective search space: 4851315431
effective search space used: 4851315431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)