Query 035056
Match_columns 74
No_of_seqs 103 out of 390
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 14:28:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035056.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035056hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1f3ka_ g.3.6.1 (A:) Conotoxin 36.5 2.8 0.00021 17.6 -0.3 11 42-52 5-15 (26)
2 d1tqja_ c.1.2.2 (A:) D-ribulos 31.9 8.8 0.00064 23.5 1.4 15 44-60 28-42 (221)
3 d1tqxa_ c.1.2.2 (A:) D-ribulos 31.7 8.9 0.00065 23.4 1.4 15 44-60 28-42 (221)
4 d1rpxa_ c.1.2.2 (A:) D-ribulos 31.7 8.2 0.0006 24.0 1.2 15 44-60 36-50 (230)
5 d1h1ya_ c.1.2.2 (A:) D-ribulos 29.2 10 0.00076 23.1 1.4 15 44-60 27-41 (220)
6 d2flia1 c.1.2.2 (A:3-219) D-ri 28.7 11 0.0008 22.9 1.4 11 44-54 27-37 (217)
7 d2a9da1 b.1.18.6 (A:344-466) S 23.6 48 0.0035 18.2 3.6 29 33-61 69-97 (123)
8 d1ogpa1 b.1.18.6 (A:263-389) S 18.0 57 0.0042 18.0 3.1 28 34-61 75-102 (127)
9 d3bnea2 b.12.1.1 (A:7-149) Pla 17.3 42 0.003 19.4 2.4 29 42-70 33-61 (143)
10 d1t2sa_ b.34.14.1 (A:) Argonau 12.4 8.6 0.00063 21.9 -1.8 15 35-49 89-103 (123)
No 1
>d1f3ka_ g.3.6.1 (A:) Conotoxin {Conus textile, Tx VII [TaxId: 6494]}
Probab=36.46 E-value=2.8 Score=17.64 Aligned_cols=11 Identities=36% Similarity=0.818 Sum_probs=9.2
Q ss_pred cccceeeeeee
Q 035056 42 SLPCEFASIDV 52 (74)
Q Consensus 42 ~~pC~~lsvDv 52 (74)
.-||+..|+|.
T Consensus 5 depcdvfsldc 15 (26)
T d1f3ka_ 5 DEPCDVFSLDC 15 (26)
T ss_dssp TCCCCSSSCCS
T ss_pred CCCccEEEEec
Confidence 56999999986
No 2
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]}
Probab=31.88 E-value=8.8 Score=23.53 Aligned_cols=15 Identities=20% Similarity=0.483 Sum_probs=11.7
Q ss_pred cceeeeeeeeecCCcee
Q 035056 44 PCEFASIDVSNVLGTVS 60 (74)
Q Consensus 44 pC~~lsvDv~D~~G~~~ 60 (74)
-+.++|+|++| |.-.
T Consensus 28 g~d~iHiDImD--G~Fv 42 (221)
T d1tqja_ 28 GADWIHVDVMD--GRFV 42 (221)
T ss_dssp TCSEEEEEEEB--SSSS
T ss_pred CCCEEEEECcc--CCcc
Confidence 47899999999 5543
No 3
>d1tqxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Plasmodium falciparum [TaxId: 5833]}
Probab=31.72 E-value=8.9 Score=23.40 Aligned_cols=15 Identities=20% Similarity=0.271 Sum_probs=11.7
Q ss_pred cceeeeeeeeecCCcee
Q 035056 44 PCEFASIDVSNVLGTVS 60 (74)
Q Consensus 44 pC~~lsvDv~D~~G~~~ 60 (74)
-++++|+|++| |.-.
T Consensus 28 ~~d~iHiDimD--G~Fv 42 (221)
T d1tqxa_ 28 GAEWIHLDVMD--MHFV 42 (221)
T ss_dssp TCSEEEEEEEB--SSSS
T ss_pred CCCEEEEECcc--CcCc
Confidence 47899999999 6533
No 4
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=31.65 E-value=8.2 Score=23.95 Aligned_cols=15 Identities=27% Similarity=0.727 Sum_probs=11.7
Q ss_pred cceeeeeeeeecCCcee
Q 035056 44 PCEFASIDVSNVLGTVS 60 (74)
Q Consensus 44 pC~~lsvDv~D~~G~~~ 60 (74)
-+.++|+|++| |.-.
T Consensus 36 g~d~iHiDImD--G~Fv 50 (230)
T d1rpxa_ 36 GCDWIHVDVMD--GRFV 50 (230)
T ss_dssp TCCCEEEEEEB--SSSS
T ss_pred CCCEEEEeCcc--CCcC
Confidence 47899999999 5543
No 5
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=29.24 E-value=10 Score=23.09 Aligned_cols=15 Identities=13% Similarity=0.452 Sum_probs=11.6
Q ss_pred cceeeeeeeeecCCcee
Q 035056 44 PCEFASIDVSNVLGTVS 60 (74)
Q Consensus 44 pC~~lsvDv~D~~G~~~ 60 (74)
-+.++|+|++| |.-.
T Consensus 27 ~~d~iHiDimD--g~Fv 41 (220)
T d1h1ya_ 27 GADWLHMDIMD--GHFV 41 (220)
T ss_dssp TCSEEEEEEEB--SSSS
T ss_pred CCCEEEEeeec--Cccc
Confidence 47889999999 5443
No 6
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=28.67 E-value=11 Score=22.95 Aligned_cols=11 Identities=27% Similarity=0.637 Sum_probs=9.8
Q ss_pred cceeeeeeeee
Q 035056 44 PCEFASIDVSN 54 (74)
Q Consensus 44 pC~~lsvDv~D 54 (74)
-+.++|+|++|
T Consensus 27 g~d~iHiDimD 37 (217)
T d2flia1 27 DAEYVHIDIMD 37 (217)
T ss_dssp TCCEEEEEEEB
T ss_pred CCCEEEEEccc
Confidence 47899999999
No 7
>d2a9da1 b.1.18.6 (A:344-466) Sulfite oxidase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=23.64 E-value=48 Score=18.24 Aligned_cols=29 Identities=3% Similarity=-0.196 Sum_probs=21.0
Q ss_pred EEEEeEEEccccceeeeeeeeecCCceee
Q 035056 33 RIDFNMSFPSLPCEFASIDVSNVLGTVSY 61 (74)
Q Consensus 33 ~In~DItfp~~pC~~lsvDv~D~~G~~~~ 61 (74)
.=.+++.+|..-..-+-+.+.|..|+.|.
T Consensus 69 ~W~~~~~~~~~~~~~i~~RA~D~~G~~QP 97 (123)
T d2a9da1 69 LWELTVPVEAGTELEIVCKAVDSSYNVQP 97 (123)
T ss_dssp EEEEEEEECTTCEEEEEEEEEETTCCBCC
T ss_pred EEEEEEEcCCCCeEEEEEEEEcCCCCcCC
Confidence 34566666666344588899999999875
No 8
>d1ogpa1 b.1.18.6 (A:263-389) Sulfite oxidase, C-terminal domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=17.96 E-value=57 Score=17.95 Aligned_cols=28 Identities=7% Similarity=-0.010 Sum_probs=22.0
Q ss_pred EEEeEEEccccceeeeeeeeecCCceee
Q 035056 34 IDFNMSFPSLPCEFASIDVSNVLGTVSY 61 (74)
Q Consensus 34 In~DItfp~~pC~~lsvDv~D~~G~~~~ 61 (74)
-.+..+.|.-.+..+-+.+.|.+|..|.
T Consensus 75 ~~~~~~~~~~g~~~i~~RA~D~~g~~QP 102 (127)
T d1ogpa1 75 VLFEATIDVSQTTEVIAKAVDSAANVQP 102 (127)
T ss_dssp EEEEEEEEESSCEEEEEEEEETTCCBCC
T ss_pred EEEEEEecCCCceEEEEEEECCCCCCCC
Confidence 4556666666788899999999998875
No 9
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}
Probab=17.32 E-value=42 Score=19.41 Aligned_cols=29 Identities=17% Similarity=0.204 Sum_probs=22.9
Q ss_pred cccceeeeeeeeecCCceeecccCCEEEE
Q 035056 42 SLPCEFASIDVSNVLGTVSYSSCQFLCSM 70 (74)
Q Consensus 42 ~~pC~~lsvDv~D~~G~~~~~i~~~i~k~ 70 (74)
.+.|+++|.+.-|.+|.....-.-.+++|
T Consensus 33 ~V~lqLVS~~~~d~~g~gk~~~~a~l~~~ 61 (143)
T d3bnea2 33 SVSLQLISATKADAHGKGKVGKDTFLEGI 61 (143)
T ss_dssp SEEEEEEEEEEECTTSCEEECCCEECCEE
T ss_pred cEEEEEEEeeccCCCCCcccccceEeccc
Confidence 56789999999999998776665566665
No 10
>d1t2sa_ b.34.14.1 (A:) Argonaute 2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=12.45 E-value=8.6 Score=21.94 Aligned_cols=15 Identities=27% Similarity=0.736 Sum_probs=11.1
Q ss_pred EEeEEEccccceeee
Q 035056 35 DFNMSFPSLPCEFAS 49 (74)
Q Consensus 35 n~DItfp~~pC~~ls 49 (74)
|..+.+|++||-.++
T Consensus 89 ~~~Lk~p~lPcl~vG 103 (123)
T d1t2sa_ 89 NYPLKFPQLHCLNVG 103 (123)
T ss_dssp TCCCSCTTSEEEEEE
T ss_pred CccccCCCCcEEEeC
Confidence 566779999996543
Done!