Query 035064
Match_columns 74
No_of_seqs 158 out of 1130
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 14:35:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035064.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035064hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kzh_A Probable sugar kinase; 99.6 2.6E-16 9E-21 107.2 7.0 70 1-70 10-83 (328)
2 3ry7_A Ribokinase; transferase 99.6 3.6E-16 1.2E-20 105.0 6.7 70 1-70 6-81 (304)
3 3go6_A Ribokinase RBSK; phosph 99.6 4.1E-16 1.4E-20 106.2 7.0 70 1-70 23-97 (310)
4 3ikh_A Carbohydrate kinase; tr 99.6 4E-16 1.4E-20 105.3 6.7 70 1-70 6-80 (299)
5 1vm7_A Ribokinase; TM0960, str 99.6 5.1E-16 1.7E-20 105.5 6.9 70 1-70 18-93 (311)
6 1rkd_A Ribokinase; carbohydrat 99.6 4.5E-16 1.5E-20 104.9 6.5 70 1-70 8-82 (309)
7 2fv7_A Ribokinase; structural 99.6 5.6E-16 1.9E-20 105.9 7.1 70 1-70 28-102 (331)
8 2c4e_A Sugar kinase MJ0406; tr 99.6 6.7E-16 2.3E-20 104.1 7.2 71 1-71 9-84 (302)
9 2hlz_A Ketohexokinase; non-pro 99.6 1E-15 3.4E-20 103.9 7.4 70 1-70 21-95 (312)
10 2nwh_A AGR_C_3442P, carbohydra 99.6 6.6E-16 2.2E-20 104.9 6.5 70 1-70 7-80 (317)
11 2rbc_A Sugar kinase, AGR_C_456 99.6 1.8E-15 6.2E-20 104.3 6.8 70 1-70 33-107 (343)
12 3bf5_A Ribokinase related prot 99.6 3.8E-15 1.3E-19 101.2 6.8 68 1-70 24-96 (306)
13 2ajr_A Sugar kinase, PFKB fami 99.5 6.2E-15 2.1E-19 100.7 5.3 67 1-69 16-90 (331)
14 3ljs_A Fructokinase; fructokia 99.5 1.1E-14 3.8E-19 99.4 6.0 66 1-70 8-77 (338)
15 3h49_A Ribokinase; transferase 99.5 8.3E-15 2.8E-19 99.7 3.9 70 1-70 9-84 (325)
16 3vas_A Putative adenosine kina 99.5 7.8E-15 2.7E-19 102.0 2.9 70 1-70 28-125 (370)
17 3hj6_A Fructokinase, FRK; fruc 99.5 3.1E-14 1.1E-18 96.9 5.7 67 1-70 25-95 (327)
18 2dcn_A Hypothetical fructokina 99.5 4.3E-14 1.5E-18 95.3 6.1 65 1-70 5-74 (311)
19 2pkf_A Adenosine kinase; trans 99.5 2.9E-14 1E-18 97.6 5.2 69 1-70 14-96 (334)
20 2v78_A Fructokinase; transfera 99.5 6E-14 2.1E-18 94.7 6.5 65 1-70 5-74 (313)
21 3ktn_A Carbohydrate kinase, PF 99.5 4.3E-14 1.5E-18 96.6 5.7 65 1-70 6-75 (346)
22 3ie7_A LIN2199 protein; phosph 99.5 1E-13 3.6E-18 93.8 7.5 67 2-70 7-79 (320)
23 2qcv_A Putative 5-dehydro-2-de 99.5 7.6E-14 2.6E-18 94.8 6.6 67 1-70 15-85 (332)
24 3b1n_A Ribokinase, putative; r 99.5 4.5E-14 1.6E-18 96.5 5.4 69 1-70 4-87 (326)
25 2f02_A Tagatose-6-phosphate ki 99.5 8.6E-14 3E-18 94.6 6.7 68 1-70 6-78 (323)
26 3cqd_A 6-phosphofructokinase i 99.5 5.8E-14 2E-18 94.5 5.7 67 2-70 7-78 (309)
27 3umo_A 6-phosphofructokinase i 99.5 6.1E-14 2.1E-18 94.4 5.7 67 2-70 7-78 (309)
28 4gm6_A PFKB family carbohydrat 99.5 8.5E-14 2.9E-18 95.3 6.5 65 1-70 28-97 (351)
29 3ewm_A Uncharacterized sugar k 99.5 6.4E-14 2.2E-18 94.8 5.8 65 1-70 5-74 (313)
30 3pl2_A Sugar kinase, ribokinas 99.5 5.2E-14 1.8E-18 95.1 4.5 67 1-70 12-82 (319)
31 4du5_A PFKB; structural genomi 99.5 1E-13 3.5E-18 94.9 6.0 65 1-70 30-99 (336)
32 3iq0_A Putative ribokinase II; 99.4 1.1E-13 3.8E-18 94.3 5.9 67 1-70 7-78 (330)
33 1v1a_A 2-keto-3-deoxygluconate 99.4 1.2E-13 3.9E-18 93.2 6.0 65 1-70 5-74 (309)
34 3otx_A Adenosine kinase, putat 99.4 4.1E-14 1.4E-18 96.8 2.8 70 1-70 11-110 (347)
35 4e3a_A Sugar kinase protein; s 99.4 1.7E-13 5.9E-18 94.7 5.9 70 1-70 29-121 (352)
36 2jg5_A Fructose 1-phosphate ki 99.4 3.3E-13 1.1E-17 90.6 7.1 67 2-70 5-76 (306)
37 2jg1_A Tagatose-6-phosphate ki 99.4 2.6E-13 9E-18 92.7 6.3 67 2-70 25-96 (330)
38 1bx4_A Protein (adenosine kina 99.4 1.5E-13 5.2E-18 93.8 5.1 70 1-70 10-108 (345)
39 4e84_A D-beta-D-heptose 7-phos 99.4 2.8E-13 9.7E-18 93.8 5.7 70 1-71 57-135 (352)
40 2abs_A Adenosine kinase, AK; r 99.4 4E-13 1.4E-17 93.3 6.3 70 1-70 36-132 (383)
41 2abq_A Fructose 1-phosphate ki 99.4 6.5E-13 2.2E-17 89.4 7.0 67 2-70 5-76 (306)
42 1tyy_A Putative sugar kinase; 99.4 4.5E-13 1.5E-17 91.9 5.8 60 1-70 28-91 (339)
43 3lhx_A Ketodeoxygluconokinase; 99.4 3.4E-13 1.2E-17 91.4 4.0 59 1-70 8-74 (319)
44 4e69_A 2-dehydro-3-deoxyglucon 99.4 7.7E-13 2.6E-17 90.4 5.7 61 1-70 27-93 (328)
45 3kd6_A Carbohydrate kinase, PF 99.4 6.5E-13 2.2E-17 90.1 5.2 59 1-70 6-69 (313)
46 3loo_A Anopheles gambiae adeno 99.4 1.3E-13 4.6E-18 95.3 1.6 70 1-70 27-124 (365)
47 2qhp_A Fructokinase; NP_810670 99.3 1.5E-12 5.2E-17 87.0 5.3 55 1-70 7-65 (296)
48 3uq6_A Adenosine kinase, putat 99.3 9.1E-13 3.1E-17 91.5 3.7 70 1-70 30-127 (372)
49 2afb_A 2-keto-3-deoxygluconate 99.2 3.4E-11 1.2E-15 82.4 5.1 64 7-70 12-85 (351)
50 1vk4_A PFKB carbohydrate kinas 99.0 3.2E-10 1.1E-14 76.3 4.7 59 11-70 13-75 (298)
51 3fwy_A Light-independent proto 74.8 2.8 9.6E-05 28.3 3.3 19 36-54 65-83 (314)
52 2re2_A Uncharacterized protein 71.9 1.6 5.5E-05 26.1 1.4 39 33-73 65-103 (136)
53 3rp8_A Flavoprotein monooxygen 63.6 8.9 0.0003 25.7 3.9 29 27-55 25-54 (407)
54 1ua4_A Glucokinase, ADP-depend 61.6 2.7 9.1E-05 30.4 1.0 29 31-59 109-139 (455)
55 3drw_A ADP-specific phosphofru 55.7 4.2 0.00014 29.6 1.2 33 29-61 113-146 (474)
56 3kjh_A CO dehydrogenase/acetyl 55.2 7.4 0.00025 23.9 2.2 24 32-55 8-36 (254)
57 3end_A Light-independent proto 52.7 11 0.00037 24.6 2.8 28 27-55 45-77 (307)
58 3zq6_A Putative arsenical pump 52.4 12 0.00042 24.9 3.1 29 27-55 17-50 (324)
59 2afh_E Nitrogenase iron protei 51.5 12 0.0004 24.2 2.8 20 35-54 18-37 (289)
60 2woj_A ATPase GET3; tail-ancho 51.3 9.9 0.00034 25.9 2.5 29 27-55 21-56 (354)
61 1gc5_A ADP-dependent glucokina 50.8 6.4 0.00022 28.5 1.6 28 31-58 117-146 (467)
62 2gk4_A Conserved hypothetical 49.9 10 0.00036 24.9 2.3 29 29-57 25-53 (232)
63 1cp2_A CP2, nitrogenase iron p 49.6 12 0.00041 23.6 2.6 20 36-55 18-37 (269)
64 3kkj_A Amine oxidase, flavin-c 49.5 15 0.00051 21.5 2.9 20 35-54 13-32 (336)
65 3bfv_A CAPA1, CAPB2, membrane 49.4 13 0.00046 24.2 2.9 21 35-55 99-119 (271)
66 3ug7_A Arsenical pump-driving 49.3 14 0.00049 24.9 3.1 28 28-55 30-62 (349)
67 3q9l_A Septum site-determining 49.1 14 0.00047 23.0 2.8 19 36-54 20-38 (260)
68 2ph1_A Nucleotide-binding prot 49.1 14 0.00046 23.6 2.8 27 28-54 23-54 (262)
69 2woo_A ATPase GET3; tail-ancho 48.9 12 0.00042 25.0 2.7 28 28-55 23-55 (329)
70 1ryi_A Glycine oxidase; flavop 48.5 26 0.00088 23.0 4.2 29 27-55 19-48 (382)
71 3eme_A Rhodanese-like domain p 47.6 15 0.0005 20.0 2.5 25 28-52 61-85 (103)
72 4dzz_A Plasmid partitioning pr 47.0 16 0.00055 21.8 2.8 20 36-55 19-38 (206)
73 1g3q_A MIND ATPase, cell divis 46.8 16 0.00054 22.5 2.8 20 36-55 20-39 (237)
74 1wcv_1 SOJ, segregation protei 46.6 16 0.00054 23.1 2.8 24 31-54 14-42 (257)
75 3la6_A Tyrosine-protein kinase 46.0 15 0.0005 24.3 2.6 20 36-55 110-129 (286)
76 1rdu_A Conserved hypothetical 45.2 3.9 0.00013 23.3 -0.3 40 33-73 48-87 (116)
77 1byi_A Dethiobiotin synthase; 45.2 18 0.00062 22.0 2.9 20 35-54 18-37 (224)
78 3cio_A ETK, tyrosine-protein k 45.0 17 0.00058 24.0 2.9 20 35-54 121-140 (299)
79 4gcm_A TRXR, thioredoxin reduc 44.7 56 0.0019 20.7 5.3 27 28-54 9-36 (312)
80 2wfb_A Putative uncharacterize 44.6 5.4 0.00018 22.9 0.3 41 32-73 52-92 (120)
81 3ea0_A ATPase, para family; al 44.4 14 0.00048 22.8 2.3 20 36-55 22-42 (245)
82 1l2l_A ADP-dependent glucokina 44.2 7 0.00024 28.3 0.9 28 31-58 112-141 (457)
83 1hyq_A MIND, cell division inh 43.7 19 0.00063 22.6 2.8 19 36-54 20-38 (263)
84 3cwq_A Para family chromosome 43.6 16 0.00054 22.6 2.4 18 36-54 18-35 (209)
85 4a5l_A Thioredoxin reductase; 43.0 38 0.0013 21.4 4.2 27 28-54 7-34 (314)
86 2oze_A ORF delta'; para, walke 42.9 19 0.00065 23.1 2.8 24 32-55 45-73 (298)
87 3pg5_A Uncharacterized protein 41.4 20 0.0007 24.2 2.9 19 36-54 19-37 (361)
88 2xj4_A MIPZ; replication, cell 40.9 21 0.00073 23.0 2.8 18 36-53 22-39 (286)
89 1eo1_A Hypothetical protein MT 40.5 5.2 0.00018 23.1 -0.2 40 33-73 51-90 (124)
90 3foj_A Uncharacterized protein 40.3 16 0.00054 19.8 1.8 25 28-52 61-85 (100)
91 4fk1_A Putative thioredoxin re 40.3 42 0.0015 21.4 4.2 27 29-55 10-37 (304)
92 2yx6_A Hypothetical protein PH 40.1 6.4 0.00022 22.6 0.1 35 38-73 54-88 (121)
93 3iqw_A Tail-anchored protein t 39.1 19 0.00064 24.5 2.4 28 28-55 20-52 (334)
94 3ipr_A PTS system, IIA compone 36.7 25 0.00085 21.1 2.5 25 32-56 68-97 (150)
95 1jw9_B Molybdopterin biosynthe 35.5 28 0.00094 22.4 2.7 31 28-60 35-65 (249)
96 3fkq_A NTRC-like two-domain pr 35.5 26 0.00089 23.7 2.6 27 28-54 148-179 (373)
97 3ek2_A Enoyl-(acyl-carrier-pro 34.8 46 0.0016 20.7 3.6 24 33-56 26-49 (271)
98 1ihu_A Arsenical pump-driving 34.4 32 0.0011 24.7 3.1 21 35-55 24-44 (589)
99 3fbt_A Chorismate mutase and s 34.2 40 0.0014 22.4 3.4 28 28-55 126-154 (282)
100 2wdq_A Succinate dehydrogenase 34.2 32 0.0011 24.9 3.1 29 28-56 11-39 (588)
101 1wv9_A Rhodanese homolog TT165 33.6 37 0.0013 18.0 2.7 22 28-49 58-79 (94)
102 1u7z_A Coenzyme A biosynthesis 33.6 28 0.00095 22.6 2.4 25 31-55 32-56 (226)
103 2h88_A Succinate dehydrogenase 33.4 33 0.0011 25.2 3.1 29 28-56 22-50 (621)
104 3f9i_A 3-oxoacyl-[acyl-carrier 32.8 59 0.002 20.0 3.9 24 32-55 23-46 (249)
105 3cty_A Thioredoxin reductase; 32.1 70 0.0024 20.3 4.2 29 27-55 18-47 (319)
106 3cgv_A Geranylgeranyl reductas 31.9 68 0.0023 20.9 4.2 28 28-55 7-35 (397)
107 3igf_A ALL4481 protein; two-do 31.8 42 0.0014 23.2 3.2 23 36-59 19-41 (374)
108 1zud_1 Adenylyltransferase THI 31.6 56 0.0019 21.0 3.7 22 28-49 32-53 (251)
109 3i3l_A Alkylhalidase CMLS; fla 31.5 58 0.002 23.7 4.1 29 27-55 25-54 (591)
110 2oln_A NIKD protein; flavoprot 31.3 42 0.0014 22.2 3.1 26 30-55 10-35 (397)
111 3itj_A Thioredoxin reductase 1 31.2 57 0.0019 20.6 3.6 29 27-55 24-53 (338)
112 3iwh_A Rhodanese-like domain p 31.2 38 0.0013 18.8 2.5 38 28-70 61-98 (103)
113 3s2u_A UDP-N-acetylglucosamine 30.8 65 0.0022 21.4 4.0 29 27-55 4-38 (365)
114 3tnl_A Shikimate dehydrogenase 30.7 40 0.0014 22.8 2.9 29 28-56 158-187 (315)
115 3io3_A DEHA2D07832P; chaperone 30.3 34 0.0012 23.3 2.5 27 29-55 23-56 (348)
116 1o13_A Probable NIFB protein; 30.0 14 0.00047 21.9 0.5 35 38-73 67-101 (136)
117 3bed_A PTS system, IIA compone 29.3 49 0.0017 19.5 2.9 24 32-55 71-94 (142)
118 1pdo_A Mannose permease; phosp 29.0 59 0.002 18.9 3.2 25 32-56 68-92 (135)
119 3nhv_A BH2092 protein; alpha-b 28.5 88 0.003 18.1 3.9 19 35-53 86-104 (144)
120 3don_A Shikimate dehydrogenase 28.3 37 0.0013 22.5 2.4 29 28-56 121-150 (277)
121 3k9g_A PF-32 protein; ssgcid, 27.7 38 0.0013 21.3 2.3 26 29-55 33-63 (267)
122 3oz2_A Digeranylgeranylglycero 27.6 49 0.0017 21.3 2.9 25 30-54 9-34 (397)
123 1ihu_A Arsenical pump-driving 27.5 68 0.0023 23.0 3.8 28 27-54 330-362 (589)
124 2bs2_A Quinol-fumarate reducta 27.5 34 0.0012 25.4 2.3 29 28-56 9-37 (660)
125 3phh_A Shikimate dehydrogenase 27.4 36 0.0012 22.5 2.2 28 28-55 122-149 (269)
126 3iwt_A 178AA long hypothetical 27.3 56 0.0019 19.7 3.0 24 38-61 44-67 (178)
127 3dme_A Conserved exported prot 27.0 57 0.002 20.9 3.1 24 32-55 12-35 (369)
128 3dk9_A Grase, GR, glutathione 26.0 1.3E+02 0.0046 20.5 5.0 28 27-54 22-50 (478)
129 3f8d_A Thioredoxin reductase ( 25.9 1E+02 0.0034 19.2 4.1 29 27-55 17-46 (323)
130 3r9u_A Thioredoxin reductase; 25.7 77 0.0026 19.7 3.5 23 33-55 13-36 (315)
131 3eag_A UDP-N-acetylmuramate:L- 25.7 92 0.0031 20.6 4.0 42 29-70 9-51 (326)
132 1kf6_A Fumarate reductase flav 25.6 52 0.0018 23.9 2.9 28 29-56 10-39 (602)
133 4hb9_A Similarities with proba 25.6 89 0.0031 20.3 3.9 24 30-53 6-30 (412)
134 3t4e_A Quinate/shikimate dehyd 25.6 56 0.0019 22.0 2.9 28 28-55 152-180 (312)
135 1vl8_A Gluconate 5-dehydrogena 25.4 84 0.0029 19.8 3.7 24 32-55 30-53 (267)
136 2cul_A Glucose-inhibited divis 25.3 67 0.0023 19.8 3.1 24 32-55 11-34 (232)
137 3jyo_A Quinate/shikimate dehyd 25.1 42 0.0014 22.1 2.2 27 28-54 131-158 (283)
138 3cp8_A TRNA uridine 5-carboxym 25.1 57 0.0019 24.4 3.1 27 30-56 27-53 (641)
139 3ihm_A Styrene monooxygenase A 24.9 43 0.0015 22.9 2.3 29 27-55 24-53 (430)
140 2gf3_A MSOX, monomeric sarcosi 24.8 65 0.0022 21.0 3.1 24 32-55 11-34 (389)
141 1npy_A Hypothetical shikimate 24.3 67 0.0023 21.0 3.1 28 28-55 123-151 (271)
142 1fl2_A Alkyl hydroperoxide red 24.1 85 0.0029 19.7 3.5 21 33-53 10-30 (310)
143 1c0p_A D-amino acid oxidase; a 24.0 61 0.0021 21.1 2.8 26 30-55 12-37 (363)
144 3flh_A Uncharacterized protein 23.8 21 0.00072 20.2 0.5 22 28-49 76-99 (124)
145 1lu9_A Methylene tetrahydromet 23.8 46 0.0016 21.5 2.2 24 32-55 128-151 (287)
146 3kbq_A Protein TA0487; structu 23.7 92 0.0031 19.3 3.5 26 36-61 25-50 (172)
147 1chu_A Protein (L-aspartate ox 23.7 42 0.0014 24.0 2.1 29 28-57 12-40 (540)
148 2a87_A TRXR, TR, thioredoxin r 23.6 1E+02 0.0036 19.7 3.9 28 27-54 16-44 (335)
149 3pvc_A TRNA 5-methylaminomethy 23.6 89 0.0031 22.8 3.9 28 28-55 268-295 (689)
150 3gk5_A Uncharacterized rhodane 23.3 18 0.00062 20.0 0.1 26 28-53 60-85 (108)
151 2zxi_A TRNA uridine 5-carboxym 23.2 66 0.0022 24.1 3.1 26 30-55 33-58 (637)
152 3u62_A Shikimate dehydrogenase 23.2 74 0.0025 20.6 3.1 28 28-55 112-140 (253)
153 1nyt_A Shikimate 5-dehydrogena 23.2 49 0.0017 21.3 2.2 26 29-54 124-149 (271)
154 1p77_A Shikimate 5-dehydrogena 23.1 40 0.0014 21.8 1.8 28 28-55 123-150 (272)
155 1qo8_A Flavocytochrome C3 fuma 22.8 65 0.0022 22.9 3.0 26 30-55 127-152 (566)
156 4at0_A 3-ketosteroid-delta4-5a 22.8 71 0.0024 22.3 3.1 28 29-56 46-73 (510)
157 2uzz_A N-methyl-L-tryptophan o 22.4 60 0.0021 21.0 2.5 24 32-55 10-33 (372)
158 3g5s_A Methylenetetrahydrofola 22.1 74 0.0025 23.0 3.1 23 33-55 10-32 (443)
159 2p91_A Enoyl-[acyl-carrier-pro 21.9 72 0.0025 20.2 2.8 23 33-55 33-55 (285)
160 3o8q_A Shikimate 5-dehydrogena 21.8 64 0.0022 21.3 2.6 28 28-55 130-158 (281)
161 3asu_A Short-chain dehydrogena 21.8 71 0.0024 19.9 2.7 24 32-55 9-32 (248)
162 3o0h_A Glutathione reductase; 21.8 83 0.0028 21.7 3.3 28 28-55 29-57 (484)
163 3pwz_A Shikimate dehydrogenase 21.7 55 0.0019 21.5 2.2 28 28-55 124-152 (272)
164 1qsg_A Enoyl-[acyl-carrier-pro 21.7 74 0.0025 19.9 2.8 23 33-55 21-43 (265)
165 1y0p_A Fumarate reductase flav 21.7 75 0.0026 22.5 3.1 27 29-55 131-157 (571)
166 2wsb_A Galactitol dehydrogenas 21.7 56 0.0019 20.1 2.2 24 32-55 20-43 (254)
167 2dkn_A 3-alpha-hydroxysteroid 21.5 57 0.002 19.8 2.2 24 32-55 10-33 (255)
168 2yxt_A Pyridoxal kinase; beta 21.0 5.2 0.00018 26.3 -2.9 14 43-56 28-41 (312)
169 4b1b_A TRXR, thioredoxin reduc 20.9 73 0.0025 23.0 2.9 27 28-54 45-72 (542)
170 2wyu_A Enoyl-[acyl carrier pro 20.8 73 0.0025 19.9 2.6 23 33-55 20-42 (261)
171 2q0l_A TRXR, thioredoxin reduc 20.7 1.1E+02 0.0038 19.2 3.5 23 33-55 10-33 (311)
172 1mkz_A Molybdenum cofactor bio 20.7 1.2E+02 0.0041 18.3 3.5 25 37-61 31-55 (172)
173 2ekp_A 2-deoxy-D-gluconate 3-d 20.7 60 0.0021 20.0 2.2 24 32-55 11-34 (239)
174 2hmt_A YUAA protein; RCK, KTN, 20.6 1.1E+02 0.0037 16.7 3.1 27 29-55 11-37 (144)
175 2e5v_A L-aspartate oxidase; ar 20.6 84 0.0029 21.9 3.1 27 30-56 5-31 (472)
176 4gud_A Imidazole glycerol phos 20.6 64 0.0022 19.6 2.3 18 36-53 15-32 (211)
177 2zat_A Dehydrogenase/reductase 20.4 61 0.0021 20.2 2.2 24 32-55 23-46 (260)
No 1
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.65 E-value=2.6e-16 Score=107.24 Aligned_cols=70 Identities=27% Similarity=0.426 Sum_probs=65.0
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++.+++..|.++++.+.++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 10 ~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv 83 (328)
T 3kzh_A 10 LVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGY 83 (328)
T ss_dssp EEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTE
T ss_pred EEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCC
Confidence 589999999999999999888888878899999999999999999999999999999999998 5677777
No 2
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.64 E-value=3.6e-16 Score=105.04 Aligned_cols=70 Identities=21% Similarity=0.254 Sum_probs=64.0
Q ss_pred CEEcceeceeEeecCCCCCCCcce-ec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTT-LG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~-~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|+++++++.|.++++. .. +....+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.|+
T Consensus 6 ~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gv 81 (304)
T 3ry7_A 6 VILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHI 81 (304)
T ss_dssp EEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTTC
T ss_pred EEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcCC
Confidence 589999999999999998888776 65 7899999999999999999999999999999999998 6677787
No 3
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.64 E-value=4.1e-16 Score=106.18 Aligned_cols=70 Identities=20% Similarity=0.265 Sum_probs=64.5
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|+++++++.|.++++... ++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 23 ~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~~gV 97 (310)
T 3go6_A 23 CVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAV 97 (310)
T ss_dssp EEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHHHTTC
T ss_pred EEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCC
Confidence 58999999999999998888887776 8899999999999999999999999999999999998 6677787
No 4
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.63 E-value=4e-16 Score=105.34 Aligned_cols=70 Identities=21% Similarity=0.221 Sum_probs=64.4
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|+++++++.|.++++... +....+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.|+
T Consensus 6 ~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~~gv 80 (299)
T 3ikh_A 6 YVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPL 80 (299)
T ss_dssp EEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGGSSC
T ss_pred EEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCC
Confidence 58999999999999999999888776 7899999999999999999999999999999999998 5667777
No 5
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.63 E-value=5.1e-16 Score=105.47 Aligned_cols=70 Identities=21% Similarity=0.268 Sum_probs=62.4
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCC-cEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAK-PYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~-~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|++++|+++++++.|.++++... ++...+||+++|+|++++|||.+ +.+++.+|+|.+|+ .+++.|+
T Consensus 18 ~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~~gV 93 (311)
T 1vm7_A 18 SVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGI 93 (311)
T ss_dssp EEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTTE
T ss_pred EEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHHCCC
Confidence 58999999999999998888777665 78999999999999999999999 99999999999998 4455565
No 6
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.63 E-value=4.5e-16 Score=104.90 Aligned_cols=70 Identities=23% Similarity=0.232 Sum_probs=63.0
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++.++++.|.++++... ++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 8 ~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gv 82 (309)
T 1rkd_A 8 VVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNI 82 (309)
T ss_dssp EEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTTE
T ss_pred EEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHHcCC
Confidence 48999999999999998888777665 7889999999999999999999999999999999998 4556777
No 7
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.63 E-value=5.6e-16 Score=105.86 Aligned_cols=70 Identities=21% Similarity=0.254 Sum_probs=63.1
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++.++++.|.++++... ++...+||+++|+|++++|||.++.|++.+|+|.+|+ .+++.||
T Consensus 28 lviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~Gv 102 (331)
T 2fv7_A 28 VVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDI 102 (331)
T ss_dssp EEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTTTE
T ss_pred EEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHHHHHHHcCC
Confidence 48999999999999998888777666 7889999999999999999999999999999999998 4556777
No 8
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.63 E-value=6.7e-16 Score=104.07 Aligned_cols=71 Identities=24% Similarity=0.275 Sum_probs=63.6
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCcc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 71 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~~ 71 (74)
+|+|.+++|++.++++.|.++++... ++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||+
T Consensus 9 ~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 84 (302)
T 2c4e_A 9 TCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKNLDIN 84 (302)
T ss_dssp EEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHHHHTTCB
T ss_pred EEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHHHHcCCc
Confidence 47999999999999988888777665 7889999999999999999999999999999999997 56677873
No 9
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.62 E-value=1e-15 Score=103.90 Aligned_cols=70 Identities=17% Similarity=0.157 Sum_probs=62.4
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++..+++.|.+++.... +....+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 21 ~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~~L~~~GV 95 (312)
T 2hlz_A 21 LCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRYSV 95 (312)
T ss_dssp EEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHTTC
T ss_pred EEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHHHHHHcCC
Confidence 48999999999999988877776555 7788999999999999999999999999999999998 5667777
No 10
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=6.6e-16 Score=104.86 Aligned_cols=70 Identities=21% Similarity=0.269 Sum_probs=63.6
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++..+++.|.++++++.++...+||+++|+|++++|||.++.|++.+|+|.+|+ .+++.||
T Consensus 7 ~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV 80 (317)
T 2nwh_A 7 LVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGV 80 (317)
T ss_dssp EEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTC
T ss_pred EEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHHcCC
Confidence 589999999999998888888887777889999999999999999999999999999999998 5567777
No 11
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=1.8e-15 Score=104.28 Aligned_cols=70 Identities=17% Similarity=0.202 Sum_probs=62.1
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|+++++++.|.++++... ++...+||+++|+|++++|||.++.|++.+|+|.+|+ .+++.||
T Consensus 33 ~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~GV 107 (343)
T 2rbc_A 33 LCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGI 107 (343)
T ss_dssp EEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTE
T ss_pred EEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 48999999999999988877666554 7889999999999999999999999999999999998 5566777
No 12
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.57 E-value=3.8e-15 Score=101.21 Aligned_cols=68 Identities=16% Similarity=0.135 Sum_probs=61.2
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++.++++.| +++++.. +....+||+++|+|++++|||.++.+++.+|+| +|+ .+++.||
T Consensus 24 ~viG~~~iD~~~~~~~~p-~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV 96 (306)
T 3bf5_A 24 AYFGHLNIDVLISVDSIP-REGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIESMGI 96 (306)
T ss_dssp EEECCCEEEEEEECSCCC-SSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHHTTC
T ss_pred EEECCceEEEEEecCCCC-CCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHHcCC
Confidence 489999999999998888 7777766 688899999999999999999999999999999 998 5667777
No 13
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.54 E-value=6.2e-15 Score=100.69 Aligned_cols=67 Identities=18% Similarity=0.010 Sum_probs=59.0
Q ss_pred CEEcceeceeEeecCCCCCCCccee----ceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcC
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTL----GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGN 69 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~----~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~ 69 (74)
+|+|++++|+++++++ |.+++++. .++...+||+++|+|++++|||.++.+++.+|+| +|+ .+++.|
T Consensus 16 ~v~G~~~vD~~~~~~~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~~~g 90 (331)
T 2ajr_A 16 TVTLNPALDREIFIED-FQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRKIS 90 (331)
T ss_dssp EEESSCEEEEEEECTT-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHHHC
T ss_pred EEecchHHeEEEEcCC-ccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcC
Confidence 4899999999999998 67777655 4788999999999999999999999999999998 898 455667
No 14
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.53 E-value=1.1e-14 Score=99.37 Aligned_cols=66 Identities=23% Similarity=0.326 Sum_probs=58.1
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++...++.|.+ ..++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 8 ~viG~~~iD~~~~~~~~~~~----~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~~gV 77 (338)
T 3ljs_A 8 LCFGEALIDMLAQPLVKKGM----PRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGV 77 (338)
T ss_dssp EEESCCEEEEEECCCSSTTS----CCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHHHTC
T ss_pred EEEChhhhheeccCCCCccc----hhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHHcCC
Confidence 58999999999988876533 457888999999999999999999999999999999998 5667787
No 15
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.51 E-value=8.3e-15 Score=99.70 Aligned_cols=70 Identities=24% Similarity=0.291 Sum_probs=57.9
Q ss_pred CEEcceeceeEeecCCC-CCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIP-ANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~-~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++..+... +...+++|. ++...+||+++|+|++++|||.++.++|.+|+|.+|+ .+++.||
T Consensus 9 ~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~gV 84 (325)
T 3h49_A 9 ICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENI 84 (325)
T ss_dssp EEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHHTC
T ss_pred EEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHHHHHHHcCC
Confidence 58999999998776532 223445553 7788999999999999999999999999999999998 5677777
No 16
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.49 E-value=7.8e-15 Score=101.98 Aligned_cols=70 Identities=19% Similarity=0.182 Sum_probs=60.2
Q ss_pred CEEcceeceeEeecCC--------------------CCCCCcceec-eeEEecCChHHHHHHHHHHc---CCCcEEEEEe
Q 035064 1 MIIGGMVLDIHATPSI--------------------PANPRTTTLG-KANYVLGGVARNVAECMSKL---GAKPYMISAL 56 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~--------------------~~~~~~~~~~-~~~~~~GG~a~N~A~~larL---G~~~~lv~~v 56 (74)
+|+|+.++|+++.+++ .|.+++.... +....+||+++|+|++++|| |.++.|+|.|
T Consensus 28 ~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~~ig~v 107 (370)
T 3vas_A 28 FGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVGCI 107 (370)
T ss_dssp EEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEEEEEEE
T ss_pred EEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEEEEEEE
Confidence 5899999999999984 4445554443 78899999999999999999 9999999999
Q ss_pred cCChhcc----cHHhcCc
Q 035064 57 GLDMEIY----CWNTGNL 70 (74)
Q Consensus 57 G~D~~G~----~~~~~~~ 70 (74)
|+|.+|+ .+++.||
T Consensus 108 G~D~~G~~~~~~L~~~GV 125 (370)
T 3vas_A 108 GADIQGKYIKNDCSALDL 125 (370)
T ss_dssp CSSHHHHHHHHHHHHTTC
T ss_pred cCChhHHHHHHHHHHcCC
Confidence 9999998 6667787
No 17
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.49 E-value=3.1e-14 Score=96.91 Aligned_cols=67 Identities=24% Similarity=0.332 Sum_probs=57.7
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++...++.|.. ...++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 25 ~viG~~~~D~~~~~~~~p~~---~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv 95 (327)
T 3hj6_A 25 VSLGEILVDMISTEEVNSLS---QSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLDVLKGEQI 95 (327)
T ss_dssp EEESCCEEEEECCCCCSSGG---GCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHHHHHHHTTC
T ss_pred EEEccceEEEeccCCCCCcc---ccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 58999999999887765532 3347788999999999999999999999999999999998 5677787
No 18
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.49 E-value=4.3e-14 Score=95.25 Aligned_cols=65 Identities=17% Similarity=0.227 Sum_probs=54.5
Q ss_pred CEEcceeceeEeecCCCCCCCccee-ceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTL-GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~-~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++. +.+++... .++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 5 ~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~~gv 74 (311)
T 2dcn_A 5 ITLGEILIEFNA-----LSPGPLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGV 74 (311)
T ss_dssp EEESCCEEEEEE-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTC
T ss_pred EEECCceEEEec-----CCCCcccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 589999999987 22333333 47888999999999999999999999999999999998 5667777
No 19
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.48 E-value=2.9e-14 Score=97.57 Aligned_cols=69 Identities=20% Similarity=0.166 Sum_probs=58.9
Q ss_pred CEEcceeceeEeec----------CCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc---cHH
Q 035064 1 MIIGGMVLDIHATP----------SIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY---CWN 66 (74)
Q Consensus 1 ~vvG~~~~D~~~~~----------~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~---~~~ 66 (74)
+|+|.+++|++..+ ++.|.++++.+. ++...+||+++|+|++++|||.++.+++.+|+| +|+ .++
T Consensus 14 ~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~i~~~L~ 92 (334)
T 2pkf_A 14 AVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FADYRDWLK 92 (334)
T ss_dssp EEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHHHHHHHH
T ss_pred EEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHHHHHHHH
Confidence 48999999999998 666667666554 788899999999999999999999999999999 887 444
Q ss_pred hcCc
Q 035064 67 TGNL 70 (74)
Q Consensus 67 ~~~~ 70 (74)
+.||
T Consensus 93 ~~gV 96 (334)
T 2pkf_A 93 ARGV 96 (334)
T ss_dssp TTTE
T ss_pred HCCC
Confidence 5666
No 20
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.48 E-value=6e-14 Score=94.74 Aligned_cols=65 Identities=12% Similarity=0.121 Sum_probs=54.3
Q ss_pred CEEcceeceeEeecCCCCCCCccee-ceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTL-GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~-~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++. +.+++... .++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 5 ~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~~gv 74 (313)
T 2v78_A 5 IALGEPLIQFNS-----FNPGPLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGI 74 (313)
T ss_dssp EEECCCEEEEEE-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTC
T ss_pred EEECcceEEEec-----CCCCcccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 489999999985 22333333 37888999999999999999999999999999999998 5667777
No 21
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.48 E-value=4.3e-14 Score=96.57 Aligned_cols=65 Identities=9% Similarity=0.062 Sum_probs=54.6
Q ss_pred CEEcceeceeEeecCCCCCCCcce-eceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTT-LGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~-~~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++. +.+++.. ..++...+||+++|+|++++|||.++.+++.||+|.+|+ .+++.||
T Consensus 6 ~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv 75 (346)
T 3ktn_A 6 AAFGEVMLRFTP-----PEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGI 75 (346)
T ss_dssp EEECCCEEEEEC-----STTCCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHTTC
T ss_pred EEeChhhhhhcC-----CCCCcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHcCC
Confidence 589999999883 2333333 347889999999999999999999999999999999998 6777887
No 22
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.48 E-value=1e-13 Score=93.80 Aligned_cols=67 Identities=21% Similarity=0.214 Sum_probs=59.8
Q ss_pred EEcceecee-EeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 2 IIGGMVLDI-HATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 2 vvG~~~~D~-~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
|.++.++|+ +++++++ .+++++.. ++...+||+++|+|++++|||.++.+++.+|+| +|+ .+++.||
T Consensus 7 vt~np~iD~~~~~v~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv 79 (320)
T 3ie7_A 7 ITLNPAIDRLLFIRGEL-EKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHI 79 (320)
T ss_dssp EESSCEEEEEEEESSSC-CTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHHTTC
T ss_pred EecchHHeeeEEEcCCc-cCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCC
Confidence 567899999 9999877 77777776 889999999999999999999999999999999 998 6677787
No 23
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.47 E-value=7.6e-14 Score=94.75 Aligned_cols=67 Identities=21% Similarity=0.177 Sum_probs=56.0
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++......|. ....++...+||+++|+|++++|||.++.|++.+|+|.+|+ .+++.||
T Consensus 15 ~viG~~~~D~~~~~~~~~~---~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV 85 (332)
T 2qcv_A 15 IAIGRACIDLNAVEYNRPM---EETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGV 85 (332)
T ss_dssp EEESCCEEEEEESSCSSCG---GGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTC
T ss_pred EEECcceEEEecCCCCCCc---cccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 4899999999987654432 12246788899999999999999999999999999999998 5567777
No 24
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.47 E-value=4.5e-14 Score=96.47 Aligned_cols=69 Identities=25% Similarity=0.245 Sum_probs=59.1
Q ss_pred CEEcceeceeEeec----------CCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecC-Chhcc---cH
Q 035064 1 MIIGGMVLDIHATP----------SIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGL-DMEIY---CW 65 (74)
Q Consensus 1 ~vvG~~~~D~~~~~----------~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~-D~~G~---~~ 65 (74)
+|+|++++|+++++ ++.|.++++.+. ++...+||+++|+|++++|||.++.+++.+|+ | +|+ .+
T Consensus 4 ~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~i~~~L 82 (326)
T 3b1n_A 4 LICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQPYLDRM 82 (326)
T ss_dssp EEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHHHHHHH
T ss_pred EEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHHHHHHH
Confidence 48999999999998 667777776664 77888999999999999999999999999999 9 786 44
Q ss_pred HhcCc
Q 035064 66 NTGNL 70 (74)
Q Consensus 66 ~~~~~ 70 (74)
++.||
T Consensus 83 ~~~gV 87 (326)
T 3b1n_A 83 DALGL 87 (326)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 55666
No 25
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.47 E-value=8.6e-14 Score=94.59 Aligned_cols=68 Identities=18% Similarity=0.142 Sum_probs=60.6
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|+.++|+++++++ |.+++++.. +....+||+++|+|++++|||.++.+++.+|+ .+|+ .+++.||
T Consensus 6 ~v~g~~~~D~~~~v~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~-~~G~~i~~~L~~~gV 78 (323)
T 2f02_A 6 TVTMNPSIDISYLLDH-LKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGG-FHGAFIANELKKANI 78 (323)
T ss_dssp EEESSCEEEEEEECSC-CCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTC
T ss_pred EEecCceeEEEEecCC-cccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEecc-chHHHHHHHHHHCCC
Confidence 4789999999999998 677888776 78999999999999999999999999999997 5898 5567777
No 26
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.47 E-value=5.8e-14 Score=94.53 Aligned_cols=67 Identities=19% Similarity=0.133 Sum_probs=59.1
Q ss_pred EEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 2 IIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 2 vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
|.|+.++|+++++++ |.+++++.. +....+||+++|+|++++|||.++.+++.+|+| +|+ .+++.||
T Consensus 7 v~g~~~~D~~~~~~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv 78 (309)
T 3cqd_A 7 LTLAPSLDSATITPQ-IYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENV 78 (309)
T ss_dssp ECSSCEEEEEEEESC-CCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTC
T ss_pred EeccchheEEEEcCC-CcCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCC
Confidence 346999999999988 577887776 789999999999999999999999999999998 898 5567777
No 27
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.47 E-value=6.1e-14 Score=94.44 Aligned_cols=67 Identities=19% Similarity=0.124 Sum_probs=59.6
Q ss_pred EEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 2 IIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 2 vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
|.++.++|+++++++. .+++++.. +....+||+++|+|++++|||.++.++|.+|+| +|+ .+++.||
T Consensus 7 v~~n~~~D~~~~v~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv 78 (309)
T 3umo_A 7 LTLAPSLDSATITPQI-YPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENV 78 (309)
T ss_dssp ECSSCEEEEEEEESCC-CSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTC
T ss_pred EecchhheEEEEcCcc-cCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCC
Confidence 3466899999999988 67877776 889999999999999999999999999999999 898 6677777
No 28
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.47 E-value=8.5e-14 Score=95.27 Aligned_cols=65 Identities=17% Similarity=0.187 Sum_probs=51.0
Q ss_pred CEEcceeceeEeecCCCCCCCcc-eeceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTT-TLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~-~~~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+.+|+. ++ .+... ...+++..+||+++|+|++|+|||.++.|+|+||+|.+|+ .+++.||
T Consensus 28 ~~~GE~m~~l~--p~---~~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~GV 97 (351)
T 4gm6_A 28 VTIGELLMRLS--TQ---QGIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRHQV 97 (351)
T ss_dssp EEECCCEEEEE--CC---TTCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTE
T ss_pred EEEcceeEEec--CC---CCCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 46788888764 11 11111 2236889999999999999999999999999999999998 5777887
No 29
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.47 E-value=6.4e-14 Score=94.75 Aligned_cols=65 Identities=26% Similarity=0.251 Sum_probs=54.8
Q ss_pred CEEcceeceeEeecCCCCCCCccee-ceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTL-GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~-~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++...+ ++... .++...+||+++|+|++++|||.++.|++.+|+|.+|+ .+++.|+
T Consensus 5 ~viG~~~iD~~~~~~-----g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv 74 (313)
T 3ewm_A 5 ASIGELLIDLISVEE-----GDLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENV 74 (313)
T ss_dssp EEESCCEEEEEESSS-----SCTTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC
T ss_pred EEECceeeeeecCCC-----CCcccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 589999999986532 33333 37788999999999999999999999999999999998 5667777
No 30
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.45 E-value=5.2e-14 Score=95.12 Aligned_cols=67 Identities=22% Similarity=0.187 Sum_probs=55.9
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++...+..|.. ...++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.|+
T Consensus 12 ~~iG~~~~D~~~~~~~~p~~---~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv 82 (319)
T 3pl2_A 12 LAIGRLGVDIYPLQSGVGLA---DVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGV 82 (319)
T ss_dssp EEESCCEEEECBSSSSCCGG---GCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTE
T ss_pred EEEChhheeeecccCCCCcc---ccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 58999999998766554432 2236678899999999999999999999999999999998 5667777
No 31
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.45 E-value=1e-13 Score=94.91 Aligned_cols=65 Identities=22% Similarity=0.203 Sum_probs=55.3
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++... +++.... ++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 30 lviG~~~iD~~~~~-----~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~GV 99 (336)
T 4du5_A 30 ITFGEAMMLLVADR-----PGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGI 99 (336)
T ss_dssp EEECCCEEEEEESS-----SSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTC
T ss_pred EEEChhhhhccCCC-----CCccchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 58999999998654 2344443 7889999999999999999999999999999999998 5667777
No 32
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.45 E-value=1.1e-13 Score=94.31 Aligned_cols=67 Identities=18% Similarity=0.137 Sum_probs=54.8
Q ss_pred CEEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++...+. ++...+. .....+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 7 ~viG~~~~D~~~~~~~---~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv 78 (330)
T 3iq0_A 7 FTIGEILVEIMASKIG---QPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGV 78 (330)
T ss_dssp EEESCCEEEEEEEEET---CCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTC
T ss_pred EEEcceeEEEeccCCC---CCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHHcCC
Confidence 5899999999987322 2223333 4567899999999999999999999999999999998 5677787
No 33
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.45 E-value=1.2e-13 Score=93.21 Aligned_cols=65 Identities=18% Similarity=0.218 Sum_probs=53.6
Q ss_pred CEEcceeceeEeecCCCCCCCccee-ceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTL-GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~-~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++. +.+++... .++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.|+
T Consensus 5 ~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~~gv 74 (309)
T 1v1a_A 5 VTAGEPLVALVP-----QEPGHLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGV 74 (309)
T ss_dssp EEESCCEEEEEC-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHHTC
T ss_pred EEEccceEEEec-----CCCCcccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 589999999984 22333333 37788999999999999999999999999999999998 4556777
No 34
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.43 E-value=4.1e-14 Score=96.84 Aligned_cols=70 Identities=19% Similarity=0.101 Sum_probs=58.4
Q ss_pred CEEcceeceeEeecCC--------------------CCCCCcceec-eeEEecCChHHHHHHHHHHc----CCC-cEEEE
Q 035064 1 MIIGGMVLDIHATPSI--------------------PANPRTTTLG-KANYVLGGVARNVAECMSKL----GAK-PYMIS 54 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~--------------------~~~~~~~~~~-~~~~~~GG~a~N~A~~larL----G~~-~~lv~ 54 (74)
+++|+.++|+++.+++ .|.+++.... ++...+||+++|+|++++|| |.+ +.|+|
T Consensus 11 ~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~~~~ig 90 (347)
T 3otx_A 11 YVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKFVTYVG 90 (347)
T ss_dssp EEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSSEEEEC
T ss_pred EEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCeEEEEE
Confidence 4899999999999985 3333333333 67889999999999999999 999 99999
Q ss_pred EecCChhcc----cHHhcCc
Q 035064 55 ALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 55 ~vG~D~~G~----~~~~~~~ 70 (74)
+||+|.+|+ .+++.||
T Consensus 91 ~vG~D~~g~~~~~~l~~~GV 110 (347)
T 3otx_A 91 CIADDRYGKVLKEAAEHEGI 110 (347)
T ss_dssp EECSSHHHHHHHHHHHHHTC
T ss_pred EecCChHHHHHHHHHHHCCC
Confidence 999999998 5667777
No 35
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.43 E-value=1.7e-13 Score=94.67 Aligned_cols=70 Identities=19% Similarity=0.185 Sum_probs=56.8
Q ss_pred CEEcceeceeEeecCC-------CCCCCcceec------------eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChh
Q 035064 1 MIIGGMVLDIHATPSI-------PANPRTTTLG------------KANYVLGGVARNVAECMSKLGAKPYMISALGLDME 61 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~-------~~~~~~~~~~------------~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~ 61 (74)
+|+|+.++|++.++++ .++.+..... .....+||+++|+|++++|||.++.|+++||+|.+
T Consensus 29 ~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~vG~D~~ 108 (352)
T 4e3a_A 29 LTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNVAADQL 108 (352)
T ss_dssp EEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECCCCSSHH
T ss_pred EEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEEECCChH
Confidence 5899999999999986 2322322221 24678999999999999999999999999999999
Q ss_pred cc----cHHhcCc
Q 035064 62 IY----CWNTGNL 70 (74)
Q Consensus 62 G~----~~~~~~~ 70 (74)
|+ .+++.||
T Consensus 109 G~~l~~~l~~~GV 121 (352)
T 4e3a_A 109 GDIFTHDIRAQGV 121 (352)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 98 5667777
No 36
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.43 E-value=3.3e-13 Score=90.55 Aligned_cols=67 Identities=12% Similarity=0.041 Sum_probs=59.6
Q ss_pred EEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 2 IIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 2 vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
|.++.++|+++++++ +.+++++.. +....+||+++|+|++++|||.++.+++.+|+ .+|+ .+++.||
T Consensus 5 vt~n~~~D~~~~~~~-~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~~gv 76 (306)
T 2jg5_A 5 VTFNPSIDYVIFTND-FKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNNSAI 76 (306)
T ss_dssp EESSCEEEEEEECSS-CCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHHTTC
T ss_pred EecCceEEEEEEcCC-cccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHHCCC
Confidence 678999999999998 567888776 88999999999999999999999999999999 6897 5566777
No 37
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.42 E-value=2.6e-13 Score=92.69 Aligned_cols=67 Identities=12% Similarity=0.072 Sum_probs=59.4
Q ss_pred EEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 2 IIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 2 vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
|+|+.++|++++++++ .+++++.. ++...+||+++|+|++++|||.++.+++.+|+ .+|+ .+++.||
T Consensus 25 v~G~~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV 96 (330)
T 2jg1_A 25 LTLNPSVDISYPLTAL-KLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDHADI 96 (330)
T ss_dssp EESSCEEEEEEEESCC-CTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTC
T ss_pred EecchhheEEEecCCc-cCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHHCCC
Confidence 6799999999999975 67777776 78999999999999999999999999999996 6897 5567777
No 38
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.42 E-value=1.5e-13 Score=93.81 Aligned_cols=70 Identities=20% Similarity=0.218 Sum_probs=58.2
Q ss_pred CEEcceeceeEeecCCC------CCCCccee---------------ceeEEecCChHHHHHHHHHHcC----CCcEEEEE
Q 035064 1 MIIGGMVLDIHATPSIP------ANPRTTTL---------------GKANYVLGGVARNVAECMSKLG----AKPYMISA 55 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~------~~~~~~~~---------------~~~~~~~GG~a~N~A~~larLG----~~~~lv~~ 55 (74)
+|+|+.++|+++++++. +.+++.+. .+....+||+++|+|++++||| .++.|+|.
T Consensus 10 ~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~~ig~ 89 (345)
T 1bx4_A 10 FGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGC 89 (345)
T ss_dssp EEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEEEEEE
T ss_pred EEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEEEEEE
Confidence 58999999999998862 44444322 3678899999999999999996 99999999
Q ss_pred ecCChhcc----cHHhcCc
Q 035064 56 LGLDMEIY----CWNTGNL 70 (74)
Q Consensus 56 vG~D~~G~----~~~~~~~ 70 (74)
||+|.+|+ .+++.||
T Consensus 90 vG~D~~G~~i~~~L~~~gv 108 (345)
T 1bx4_A 90 IGIDKFGEILKRKAAEAHV 108 (345)
T ss_dssp EESSHHHHHHHHHHHHTTC
T ss_pred eCCChhHHHHHHHHHHcCC
Confidence 99999998 5567777
No 39
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.40 E-value=2.8e-13 Score=93.79 Aligned_cols=70 Identities=20% Similarity=0.256 Sum_probs=54.9
Q ss_pred CEEcceeceeEee--cCCC-C-CCCccee-ceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCcc
Q 035064 1 MIIGGMVLDIHAT--PSIP-A-NPRTTTL-GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 71 (74)
Q Consensus 1 ~vvG~~~~D~~~~--~~~~-~-~~~~~~~-~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~~ 71 (74)
+|+|.+++|++.+ +++. | .|..... .+....+||+ +|+|++++|||.++.++|.+|+|.+|+ .+++.||+
T Consensus 57 lvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~~i~~~L~~~GV~ 135 (352)
T 4e84_A 57 LVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGERIVELLGSSGVT 135 (352)
T ss_dssp EEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHTTTSCE
T ss_pred EEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHHHHHHHHHHcCCc
Confidence 5899999999987 3322 1 1222233 3788889998 899999999999999999999999998 56667763
No 40
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.40 E-value=4e-13 Score=93.33 Aligned_cols=70 Identities=23% Similarity=0.197 Sum_probs=58.7
Q ss_pred CEEcceeceeEeecCC-C-----CCCCcce--------------eceeEEecCChHHHHHHHHHHc---CCCcEEEEEec
Q 035064 1 MIIGGMVLDIHATPSI-P-----ANPRTTT--------------LGKANYVLGGVARNVAECMSKL---GAKPYMISALG 57 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~-~-----~~~~~~~--------------~~~~~~~~GG~a~N~A~~larL---G~~~~lv~~vG 57 (74)
+|+|.+++|++.++++ . |.++++. ..+....+||+++|+|++++|| |.++.|++.||
T Consensus 36 lviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~~ig~vG 115 (383)
T 2abs_A 36 FAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYMGAIG 115 (383)
T ss_dssp EEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEEEEEEC
T ss_pred EEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEEEEEEec
Confidence 5899999999999876 2 5555543 2367888999999999999999 89999999999
Q ss_pred CChhcc----cHHhcCc
Q 035064 58 LDMEIY----CWNTGNL 70 (74)
Q Consensus 58 ~D~~G~----~~~~~~~ 70 (74)
+|.+|+ .+++.||
T Consensus 116 ~D~~G~~i~~~L~~~GV 132 (383)
T 2abs_A 116 DDPRGQVLKELCDKEGL 132 (383)
T ss_dssp SSHHHHHHHHHHHHHTC
T ss_pred CChhHHHHHHHHHHcCC
Confidence 999998 5566777
No 41
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.40 E-value=6.5e-13 Score=89.42 Aligned_cols=67 Identities=13% Similarity=0.124 Sum_probs=59.8
Q ss_pred EEcceeceeEeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 2 IIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 2 vvG~~~~D~~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
|.|+.++|++++++++ .+++++.. +....+||+++|+|++++|||.++.+++.+|+ .+|+ .+++.|+
T Consensus 5 v~~n~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~~gv 76 (306)
T 2abq_A 5 VTLNPSIDYIVQVENF-QQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEKEEI 76 (306)
T ss_dssp EESSCEEEEEEECTTC-CSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHHTTC
T ss_pred EecCchheEEEEcCCc-ccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHHcCC
Confidence 6789999999999985 67888776 88999999999999999999999999999998 7898 5667777
No 42
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.39 E-value=4.5e-13 Score=91.92 Aligned_cols=60 Identities=23% Similarity=0.359 Sum_probs=52.1
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++... ..++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 28 lviG~~~~D~~~~~----------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~gV 91 (339)
T 1tyy_A 28 WVIGDASVDLVPEK----------QNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGV 91 (339)
T ss_dssp EEESCCEEEEEECS----------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTE
T ss_pred EEECcceeEEeccC----------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHHHHcCC
Confidence 48999999998863 235678899999999999999999999999999999998 4556776
No 43
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.36 E-value=3.4e-13 Score=91.39 Aligned_cols=59 Identities=19% Similarity=0.326 Sum_probs=50.5
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHcC----CCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLG----AKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larLG----~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++... .++...+||+++|+|++++||| .++.|++++|+|.+|+ .+++.||
T Consensus 8 ~viG~~~~D~~~~~-----------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV 74 (319)
T 3lhx_A 8 AVIGECMIELSEKG-----------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENV 74 (319)
T ss_dssp EEESCCEEEEEC--------------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHTTTE
T ss_pred eeechhhhhhccCC-----------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 58999999997542 2467889999999999999999 8999999999999998 5677777
No 44
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.36 E-value=7.7e-13 Score=90.43 Aligned_cols=61 Identities=18% Similarity=0.231 Sum_probs=53.3
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHc--CCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKL--GAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larL--G~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++..+ ++ .++...+||+++|+|++++|| |.++.+++.||+|.+|+ .+++.||
T Consensus 27 ~viG~~~iD~~~~~------~~---~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG~D~~G~~l~~~L~~~GV 93 (328)
T 4e69_A 27 LSIGECMAELAPAD------LP---GTYRLGFAGDTFNTAWYLARLRPESRISYFSAIGDDALSQQMRAAMSAAGI 93 (328)
T ss_dssp EEESCCEEEEEECS------ST---TEEEEEEECHHHHHHHHHHHHCTTSEEEEECEECSSHHHHHHHHHHHHTTE
T ss_pred EEecCcEEEEecCC------CC---CceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeCCCHHHHHHHHHHHHcCC
Confidence 58999999999862 11 567888999999999999999 89999999999999998 5677787
No 45
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.36 E-value=6.5e-13 Score=90.06 Aligned_cols=59 Identities=25% Similarity=0.374 Sum_probs=50.9
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHcCC-CcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGA-KPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larLG~-~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++..+. .+....+||+++|+|++++|||. ++.++|.||+| +|+ .+++.||
T Consensus 6 lviG~~~iD~~~~~~----------~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~~gV 69 (313)
T 3kd6_A 6 LVIGSLAFDDIETPF----------GRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNI 69 (313)
T ss_dssp EEESCCEEEEEECSS----------CEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHHTTE
T ss_pred EEEeEEEEeeecCCC----------CcccccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHHcCC
Confidence 589999999996321 24678899999999999999999 99999999999 997 5677777
No 46
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.36 E-value=1.3e-13 Score=95.35 Aligned_cols=70 Identities=19% Similarity=0.261 Sum_probs=56.7
Q ss_pred CEEcceeceeEeecCCC------CCCCcce--------------ec-eeEEecCChHHHHHHHHHHc---CCCcEEEEEe
Q 035064 1 MIIGGMVLDIHATPSIP------ANPRTTT--------------LG-KANYVLGGVARNVAECMSKL---GAKPYMISAL 56 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~------~~~~~~~--------------~~-~~~~~~GG~a~N~A~~larL---G~~~~lv~~v 56 (74)
+++|++++|+++.+++. +.++..+ .. +....+||+++|+|+++++| |.++.++|+|
T Consensus 27 ~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~ig~v 106 (365)
T 3loo_A 27 VGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIFFGCV 106 (365)
T ss_dssp EEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEEEEEE
T ss_pred EEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEEEEEe
Confidence 48999999999999872 3333222 22 56789999999999999987 9999999999
Q ss_pred cCChhcc----cHHhcCc
Q 035064 57 GLDMEIY----CWNTGNL 70 (74)
Q Consensus 57 G~D~~G~----~~~~~~~ 70 (74)
|+|.+|+ .+++.||
T Consensus 107 G~D~~g~~~~~~l~~~GV 124 (365)
T 3loo_A 107 GQDEYARILEERATSNGV 124 (365)
T ss_dssp ESBHHHHHHHHHHHHHTC
T ss_pred cCCchHHHHHHHHHHCCC
Confidence 9999998 5567777
No 47
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.33 E-value=1.5e-12 Score=86.99 Aligned_cols=55 Identities=24% Similarity=0.326 Sum_probs=47.9
Q ss_pred CEEcceeceeEeecCCCCCCCcceeceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 1 MIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
+|+|.+++|++ |. ...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.|+
T Consensus 7 ~viG~~~~D~~------p~---------~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv 65 (296)
T 2qhp_A 7 VGMGEALWDVL------PE---------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQL 65 (296)
T ss_dssp EEESCCEEEEE------TT---------EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC
T ss_pred EEEchhheEec------CC---------CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHHcCC
Confidence 48999999997 11 26799999999999999999999999999999998 4556776
No 48
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.31 E-value=9.1e-13 Score=91.48 Aligned_cols=70 Identities=20% Similarity=0.218 Sum_probs=54.5
Q ss_pred CEEcceeceeEeecCCC------CCCCc--------------ceec-eeEEecCChHHHHHHHHHHcCCC---cEEEEEe
Q 035064 1 MIIGGMVLDIHATPSIP------ANPRT--------------TTLG-KANYVLGGVARNVAECMSKLGAK---PYMISAL 56 (74)
Q Consensus 1 ~vvG~~~~D~~~~~~~~------~~~~~--------------~~~~-~~~~~~GG~a~N~A~~larLG~~---~~lv~~v 56 (74)
++||+..+|++..+++. .+.+. .... +.+..+||+++|+|++++|||.+ +.|+|+|
T Consensus 30 ~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fiG~V 109 (372)
T 3uq6_A 30 FGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVGCI 109 (372)
T ss_dssp EEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEEEEE
T ss_pred EEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEEeee
Confidence 47899999999998741 11111 1111 46678999999999999999976 8999999
Q ss_pred cCChhcc----cHHhcCc
Q 035064 57 GLDMEIY----CWNTGNL 70 (74)
Q Consensus 57 G~D~~G~----~~~~~~~ 70 (74)
|+|.+|+ .+++.||
T Consensus 110 G~D~~G~~l~~~L~~~GV 127 (372)
T 3uq6_A 110 GADIQGKYIKNDCSALDL 127 (372)
T ss_dssp CSSHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHcCC
Confidence 9999998 5667777
No 49
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.16 E-value=3.4e-11 Score=82.44 Aligned_cols=64 Identities=14% Similarity=0.161 Sum_probs=49.6
Q ss_pred eceeEeecC---CCCCCCc--cee-ceeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc----cHHhcCc
Q 035064 7 VLDIHATPS---IPANPRT--TTL-GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 70 (74)
Q Consensus 7 ~~D~~~~~~---~~~~~~~--~~~-~~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~----~~~~~~~ 70 (74)
.+|++...+ +.|++++ ... .++...+||+++|+|++++|||.++.+++.+|+|.+|+ .+++.||
T Consensus 12 ~~~~~~~ge~l~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv 85 (351)
T 2afb_A 12 HMKVVTFGEIMLRLSPPDHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGV 85 (351)
T ss_dssp CCEEEEESCCEEEEECSTTCCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHHTTC
T ss_pred cceEEEechhhheecCCCCccccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 455555544 3444443 232 37889999999999999999999999999999999998 4566777
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.01 E-value=3.2e-10 Score=76.31 Aligned_cols=59 Identities=17% Similarity=0.065 Sum_probs=48.0
Q ss_pred EeecCCCCCCCcceec-eeEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcc---cHHhcCc
Q 035064 11 HATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY---CWNTGNL 70 (74)
Q Consensus 11 ~~~~~~~~~~~~~~~~-~~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~---~~~~~~~ 70 (74)
.+++...|.+++.... +....+||+++|+|++++|||.++.+++.+|+|. .. .+++.||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~-~~~~~~L~~~gV 75 (298)
T 1vk4_A 13 MITFIGHVSKDVNVVDGKREIAYGGGVVMGAITSSLLGVKTKVITKCTRED-VSKFSFLRDNGV 75 (298)
T ss_dssp EEEEECCCEEEEEEETTEEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTT-GGGGTTTGGGTC
T ss_pred eEEEeccccCceEeecCeEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCH-HHHHHHHHHcCC
Confidence 3455566777776655 8889999999999999999999999999999998 32 5566666
No 51
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=74.76 E-value=2.8 Score=28.34 Aligned_cols=19 Identities=26% Similarity=0.427 Sum_probs=17.0
Q ss_pred HHHHHHHHHHcCCCcEEEE
Q 035064 36 ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~ 54 (74)
+.|.|.+|+++|.+|.++-
T Consensus 65 avNLA~aLA~~GkkVllID 83 (314)
T 3fwy_A 65 SSNLSAAFSILGKRVLQIG 83 (314)
T ss_dssp HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEe
Confidence 5899999999999988775
No 52
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=71.86 E-value=1.6 Score=26.14 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=32.0
Q ss_pred CChHHHHHHHHHHcCCCcEEEEEecCChhcccHHhcCcccc
Q 035064 33 GGVARNVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 73 (74)
Q Consensus 33 GG~a~N~A~~larLG~~~~lv~~vG~D~~G~~~~~~~~~~~ 73 (74)
+|.+...+..|+..|.++.+++.+|.-++ +.+++ ||+-|
T Consensus 65 ~g~g~~~~~~L~~~gv~~VI~g~iG~~a~-~~L~~-GI~v~ 103 (136)
T 2re2_A 65 AARGVFMLKSALDHGANALVLSEIGSPGF-NFIKN-KMDVY 103 (136)
T ss_dssp SCHHHHHHHHHHHTTCSEEEESCCBHHHH-HHHTT-TSEEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHhHH-HHHHC-CCEEE
Confidence 57777888889999999999999998877 45777 88654
No 53
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=63.63 E-value=8.9 Score=25.75 Aligned_cols=29 Identities=21% Similarity=0.198 Sum_probs=22.4
Q ss_pred eeEEecCCh-HHHHHHHHHHcCCCcEEEEE
Q 035064 27 KANYVLGGV-ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~~GG~-a~N~A~~larLG~~~~lv~~ 55 (74)
++-+.-||. +.-.|..|+|.|.++.++=+
T Consensus 25 dV~IVGaG~aGl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 25 KAIVIGAGIGGLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 555555665 57889999999999988854
No 54
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=61.56 E-value=2.7 Score=30.36 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=26.3
Q ss_pred ecCChHHHHHHHHHHcCCCcEE--EEEecCC
Q 035064 31 VLGGVARNVAECMSKLGAKPYM--ISALGLD 59 (74)
Q Consensus 31 ~~GG~a~N~A~~larLG~~~~l--v~~vG~D 59 (74)
..||.|..+|..++++|.++.+ ++.+|..
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~l~~~ 139 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQLSRL 139 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSCCCHH
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCCCCHH
Confidence 8999999999999999999998 7877753
No 55
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=55.65 E-value=4.2 Score=29.61 Aligned_cols=33 Identities=21% Similarity=0.140 Sum_probs=26.9
Q ss_pred EEecCChHHHHHHHHHHcCC-CcEEEEEecCChh
Q 035064 29 NYVLGGVARNVAECMSKLGA-KPYMISALGLDME 61 (74)
Q Consensus 29 ~~~~GG~a~N~A~~larLG~-~~~lv~~vG~D~~ 61 (74)
+...||.|.-+|..|+++|. ++.+.++......
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~sk~~ 146 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPKRL 146 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCCHHH
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCCHHH
Confidence 56799999999999999999 4777777765433
No 56
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=55.17 E-value=7.4 Score=23.95 Aligned_cols=24 Identities=25% Similarity=0.347 Sum_probs=19.5
Q ss_pred cCChH-----HHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVA-----RNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a-----~N~A~~larLG~~~~lv~~ 55 (74)
-||+| +|.|..+++.|.+|.++-.
T Consensus 8 kGGvGKTt~a~~LA~~la~~g~~VlliD~ 36 (254)
T 3kjh_A 8 KGGVGKTTVAAGLIKIMASDYDKIYAVDG 36 (254)
T ss_dssp SSSHHHHHHHHHHHHHHTTTCSCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 56654 8999999999999988753
No 57
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=52.74 E-value=11 Score=24.55 Aligned_cols=28 Identities=25% Similarity=0.406 Sum_probs=22.2
Q ss_pred eeEEecCCh-----HHHHHHHHHHcCCCcEEEEE
Q 035064 27 KANYVLGGV-----ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~~GG~-----a~N~A~~larLG~~~~lv~~ 55 (74)
.+. .-||+ ++|.|.++++.|.+|.++-.
T Consensus 45 ~v~-~KGGvGKTT~a~nLA~~La~~G~~VlliD~ 77 (307)
T 3end_A 45 AVY-GKGGIGKSTTSSNLSAAFSILGKRVLQIGC 77 (307)
T ss_dssp EEE-CSTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEE-CCCCccHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 344 57775 48999999999999998854
No 58
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=52.41 E-value=12 Score=24.86 Aligned_cols=29 Identities=31% Similarity=0.267 Sum_probs=23.1
Q ss_pred eeEEecCCh-----HHHHHHHHHHcCCCcEEEEE
Q 035064 27 KANYVLGGV-----ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~~GG~-----a~N~A~~larLG~~~~lv~~ 55 (74)
.+...-||+ ++|.|..+++.|.+|.++..
T Consensus 17 ~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~ 50 (324)
T 3zq6_A 17 VFIGGKGGVGKTTISAATALWMARSGKKTLVIST 50 (324)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 345556775 58999999999999999874
No 59
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=51.47 E-value=12 Score=24.15 Aligned_cols=20 Identities=15% Similarity=0.494 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHcCCCcEEEE
Q 035064 35 VARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 35 ~a~N~A~~larLG~~~~lv~ 54 (74)
.+.|.|..+++.|.+|.++=
T Consensus 18 ~a~nLA~~La~~G~rVlliD 37 (289)
T 2afh_E 18 TTQNLVAALAEMGKKVMIVG 37 (289)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEe
Confidence 36899999999999998874
No 60
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=51.33 E-value=9.9 Score=25.92 Aligned_cols=29 Identities=21% Similarity=0.098 Sum_probs=23.3
Q ss_pred eeEEecCC-----hHHHHHHHHH--HcCCCcEEEEE
Q 035064 27 KANYVLGG-----VARNVAECMS--KLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~~GG-----~a~N~A~~la--rLG~~~~lv~~ 55 (74)
.+...-|| .++|.|.+++ +.|.+|.++..
T Consensus 21 ~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~ 56 (354)
T 2woj_A 21 IFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLIST 56 (354)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEEC
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEEC
Confidence 44555677 4789999999 99999999875
No 61
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=50.84 E-value=6.4 Score=28.55 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=24.7
Q ss_pred ecCChHHHHHHHHHHcCCCcEE--EEEecC
Q 035064 31 VLGGVARNVAECMSKLGAKPYM--ISALGL 58 (74)
Q Consensus 31 ~~GG~a~N~A~~larLG~~~~l--v~~vG~ 58 (74)
..||.|.-+|..|+++|.++.+ ++.++.
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s~ 146 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNPK 146 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCCH
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCCH
Confidence 8999999999999999999988 666554
No 62
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=49.89 E-value=10 Score=24.86 Aligned_cols=29 Identities=17% Similarity=0.257 Sum_probs=24.9
Q ss_pred EEecCChHHHHHHHHHHcCCCcEEEEEec
Q 035064 29 NYVLGGVARNVAECMSKLGAKPYMISALG 57 (74)
Q Consensus 29 ~~~~GG~a~N~A~~larLG~~~~lv~~vG 57 (74)
..+.|+-|.-+|.++++.|.+|.+++.-.
T Consensus 25 N~SSG~mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 25 NHSTGHLGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp ECCCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 34578899999999999999999998643
No 63
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=49.58 E-value=12 Score=23.63 Aligned_cols=20 Identities=10% Similarity=0.345 Sum_probs=17.2
Q ss_pred HHHHHHHHHHcCCCcEEEEE
Q 035064 36 ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~~ 55 (74)
+.|.|..+++.|.+|.++-.
T Consensus 18 a~nLA~~la~~G~~VlliD~ 37 (269)
T 1cp2_A 18 TQNLTSGLHAMGKTIMVVGC 37 (269)
T ss_dssp HHHHHHHHHTTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCcEEEEcC
Confidence 58999999999999988743
No 64
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=49.51 E-value=15 Score=21.45 Aligned_cols=20 Identities=10% Similarity=0.240 Sum_probs=17.2
Q ss_pred hHHHHHHHHHHcCCCcEEEE
Q 035064 35 VARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 35 ~a~N~A~~larLG~~~~lv~ 54 (74)
++.-.|..|+|.|.+|.++=
T Consensus 13 aGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 13 AGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEE
Confidence 56788999999999999884
No 65
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=49.39 E-value=13 Score=24.15 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHcCCCcEEEEE
Q 035064 35 VARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 35 ~a~N~A~~larLG~~~~lv~~ 55 (74)
.++|.|..+++.|.+|.+|-.
T Consensus 99 ~a~nLA~~lA~~G~rVLLID~ 119 (271)
T 3bfv_A 99 IAANLAVAYAQAGYKTLIVDG 119 (271)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHhCCCeEEEEeC
Confidence 468999999999999998743
No 66
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=49.29 E-value=14 Score=24.92 Aligned_cols=28 Identities=21% Similarity=0.226 Sum_probs=22.0
Q ss_pred eEEecCCh-----HHHHHHHHHHcCCCcEEEEE
Q 035064 28 ANYVLGGV-----ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~-----a~N~A~~larLG~~~~lv~~ 55 (74)
+...-||+ ++|.|..+++.|.+|.++..
T Consensus 30 v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~ 62 (349)
T 3ug7_A 30 MFGGKGGVGKTTMSAATGVYLAEKGLKVVIVST 62 (349)
T ss_dssp EEECSSSTTHHHHHHHHHHHHHHSSCCEEEEEC
T ss_pred EEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 34445664 68999999999999999873
No 67
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=49.11 E-value=14 Score=23.05 Aligned_cols=19 Identities=21% Similarity=0.377 Sum_probs=16.9
Q ss_pred HHHHHHHHHHcCCCcEEEE
Q 035064 36 ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~ 54 (74)
++|.|..+++.|.+|.++-
T Consensus 20 a~~LA~~la~~g~~VlliD 38 (260)
T 3q9l_A 20 SAAIATGLAQKGKKTVVID 38 (260)
T ss_dssp HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEE
Confidence 5899999999999998875
No 68
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=49.07 E-value=14 Score=23.57 Aligned_cols=27 Identities=22% Similarity=0.207 Sum_probs=20.4
Q ss_pred eEEecCCh-----HHHHHHHHHHcCCCcEEEE
Q 035064 28 ANYVLGGV-----ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 28 ~~~~~GG~-----a~N~A~~larLG~~~~lv~ 54 (74)
+.-.-||+ +.|.|.++++.|.+|.++-
T Consensus 23 v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD 54 (262)
T 2ph1_A 23 VMSGKGGVGKSTVTALLAVHYARQGKKVGILD 54 (262)
T ss_dssp EECSSSCTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEe
Confidence 33445665 5899999999999988754
No 69
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=48.94 E-value=12 Score=25.00 Aligned_cols=28 Identities=29% Similarity=0.213 Sum_probs=21.9
Q ss_pred eEEecCC-----hHHHHHHHHHHcCCCcEEEEE
Q 035064 28 ANYVLGG-----VARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 28 ~~~~~GG-----~a~N~A~~larLG~~~~lv~~ 55 (74)
+...-|| .++|.|..+++.|.+|.++..
T Consensus 23 v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~ 55 (329)
T 2woo_A 23 FVGGKGGVGKTTTSCSLAIQMSKVRSSVLLIST 55 (329)
T ss_dssp EEECSSSSSHHHHHHHHHHHHHTSSSCEEEEEC
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 3444566 468999999999999998753
No 70
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=48.53 E-value=26 Score=22.95 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=22.0
Q ss_pred eeEEec-CChHHHHHHHHHHcCCCcEEEEE
Q 035064 27 KANYVL-GGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~~-GG~a~N~A~~larLG~~~~lv~~ 55 (74)
++-+.- |-.+.-.|..|++.|.+|.++-+
T Consensus 19 dvvIIGgG~~Gl~~A~~La~~G~~V~llE~ 48 (382)
T 1ryi_A 19 EAVVIGGGIIGSAIAYYLAKENKNTALFES 48 (382)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEeC
Confidence 444444 44677899999999999999865
No 71
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=47.58 E-value=15 Score=20.04 Aligned_cols=25 Identities=16% Similarity=0.060 Sum_probs=19.0
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEE
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYM 52 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~l 52 (74)
+.+..|..+..+|..|.++|.++..
T Consensus 61 ~yC~~g~rs~~a~~~L~~~G~~v~~ 85 (103)
T 3eme_A 61 IVCAGGVRSAKVVEYLEANGIDAVN 85 (103)
T ss_dssp EECSSSSHHHHHHHHHHTTTCEEEE
T ss_pred EECCCChHHHHHHHHHHHCCCCeEE
Confidence 3445677889999999999996543
No 72
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=47.00 E-value=16 Score=21.79 Aligned_cols=20 Identities=20% Similarity=0.321 Sum_probs=17.3
Q ss_pred HHHHHHHHHHcCCCcEEEEE
Q 035064 36 ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~~ 55 (74)
+.|.|..+++.|.+|.++-.
T Consensus 19 a~~la~~la~~g~~vlliD~ 38 (206)
T 4dzz_A 19 VINIATALSRSGYNIAVVDT 38 (206)
T ss_dssp HHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEEC
Confidence 58999999999999988753
No 73
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=46.82 E-value=16 Score=22.46 Aligned_cols=20 Identities=15% Similarity=0.295 Sum_probs=17.6
Q ss_pred HHHHHHHHHHcCCCcEEEEE
Q 035064 36 ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~~ 55 (74)
+.|.|..+++.|.+|.++-.
T Consensus 20 a~~LA~~la~~g~~VlliD~ 39 (237)
T 1g3q_A 20 TANLSVALGDRGRKVLAVDG 39 (237)
T ss_dssp HHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHhcCCeEEEEeC
Confidence 68999999999999998853
No 74
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=46.60 E-value=16 Score=23.14 Aligned_cols=24 Identities=29% Similarity=0.594 Sum_probs=19.8
Q ss_pred ecCChH-----HHHHHHHHHcCCCcEEEE
Q 035064 31 VLGGVA-----RNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 31 ~~GG~a-----~N~A~~larLG~~~~lv~ 54 (74)
.-||+| .|.|..+++.|.+|.++-
T Consensus 14 ~kGGvGKTt~a~~LA~~la~~g~~VlliD 42 (257)
T 1wcv_1 14 QKGGVGKTTTAINLAAYLARLGKRVLLVD 42 (257)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCchHHHHHHHHHHHHHHCCCCEEEEE
Confidence 456754 899999999999998874
No 75
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=46.03 E-value=15 Score=24.30 Aligned_cols=20 Identities=20% Similarity=0.360 Sum_probs=17.5
Q ss_pred HHHHHHHHHHcCCCcEEEEE
Q 035064 36 ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~~ 55 (74)
++|.|..+++.|.+|.+|-.
T Consensus 110 a~nLA~~lA~~G~rVLLID~ 129 (286)
T 3la6_A 110 CANLAAVISQTNKRVLLIDC 129 (286)
T ss_dssp HHHHHHHHHTTTCCEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEec
Confidence 58999999999999998753
No 76
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=45.23 E-value=3.9 Score=23.34 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=30.5
Q ss_pred CChHHHHHHHHHHcCCCcEEEEEecCChhcccHHhcCcccc
Q 035064 33 GGVARNVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 73 (74)
Q Consensus 33 GG~a~N~A~~larLG~~~~lv~~vG~D~~G~~~~~~~~~~~ 73 (74)
+|.+...+..++..|.++.+++.+|.-++- .+++.|++-|
T Consensus 48 ~g~g~~~~~~l~~~gv~~vi~~~iG~~a~~-~L~~~GI~v~ 87 (116)
T 1rdu_A 48 HGTGPKVVQSLVSKGVEYLIASNVGRNAFE-TLKAAGVKVY 87 (116)
T ss_dssp CCSSCSHHHHHHTTTCCEEECSSCCSSCHH-HHHTTTCEEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHhHHH-HHHHCCCEEE
Confidence 444446777888999999999999987754 5777787644
No 77
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=45.23 E-value=18 Score=22.03 Aligned_cols=20 Identities=5% Similarity=0.006 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHcCCCcEEEE
Q 035064 35 VARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 35 ~a~N~A~~larLG~~~~lv~ 54 (74)
.+.|.|.++++.|.+|.++=
T Consensus 18 ~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 18 ASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEc
Confidence 36899999999999999863
No 78
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=44.99 E-value=17 Score=24.00 Aligned_cols=20 Identities=20% Similarity=0.325 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHcCCCcEEEE
Q 035064 35 VARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 35 ~a~N~A~~larLG~~~~lv~ 54 (74)
.++|.|..+++.|.+|.+|-
T Consensus 121 va~nLA~~lA~~G~rVLLID 140 (299)
T 3cio_A 121 VSSTLAAVIAQSDQKVLFID 140 (299)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHhCCCcEEEEE
Confidence 56899999999999998875
No 79
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=44.66 E-value=56 Score=20.74 Aligned_cols=27 Identities=26% Similarity=0.204 Sum_probs=20.4
Q ss_pred eEEecCChH-HHHHHHHHHcCCCcEEEE
Q 035064 28 ANYVLGGVA-RNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 28 ~~~~~GG~a-~N~A~~larLG~~~~lv~ 54 (74)
+-+.-||.| ...|..++|+|.++.++=
T Consensus 9 vvIIG~GpAGl~aA~~l~~~g~~V~liE 36 (312)
T 4gcm_A 9 IAIIGAGPAGMTAAVYASRANLKTVMIE 36 (312)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 344455654 577899999999999985
No 80
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=44.57 E-value=5.4 Score=22.88 Aligned_cols=41 Identities=17% Similarity=0.164 Sum_probs=31.4
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEEecCChhcccHHhcCcccc
Q 035064 32 LGGVARNVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 73 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~~~~~~~~~~~ 73 (74)
..|.+...+-.|+..|.++.+++.+|.-++ +.+++.|++-|
T Consensus 52 ~~g~g~~~~~~l~~~gv~~vi~~~iG~~a~-~~L~~~GI~v~ 92 (120)
T 2wfb_A 52 SHGAGINAAQVLAKSGAGVLLTGYVGPKAF-QALQAAGIKVG 92 (120)
T ss_dssp SSCHHHHHHHHHHHHTEEEEECSCCCHHHH-HHHHHTTCEEE
T ss_pred CCCchHHHHHHHHHCCCCEEEECCCCHhHH-HHHHHCCCEEE
Confidence 356666788888889999999999987665 45777787644
No 81
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=44.39 E-value=14 Score=22.78 Aligned_cols=20 Identities=20% Similarity=0.145 Sum_probs=17.7
Q ss_pred HHHHHHHHHHc-CCCcEEEEE
Q 035064 36 ARNVAECMSKL-GAKPYMISA 55 (74)
Q Consensus 36 a~N~A~~larL-G~~~~lv~~ 55 (74)
++|.|..+++. |.+|.++-.
T Consensus 22 a~~LA~~la~~~g~~VlliD~ 42 (245)
T 3ea0_A 22 AANFAFALSQEPDIHVLAVDI 42 (245)
T ss_dssp HHHHHHHHTTSTTCCEEEEEC
T ss_pred HHHHHHHHHhCcCCCEEEEEC
Confidence 68999999999 999998864
No 82
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=44.23 E-value=7 Score=28.25 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=24.7
Q ss_pred ecCChHHHHHHHHHHcCCCcEE--EEEecC
Q 035064 31 VLGGVARNVAECMSKLGAKPYM--ISALGL 58 (74)
Q Consensus 31 ~~GG~a~N~A~~larLG~~~~l--v~~vG~ 58 (74)
..||.|.-+|..|+++|.++.+ ++.++.
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~ 141 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSE 141 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCH
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCH
Confidence 8999999999999999999988 566654
No 83
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=43.75 E-value=19 Score=22.62 Aligned_cols=19 Identities=16% Similarity=0.401 Sum_probs=17.0
Q ss_pred HHHHHHHHHHcCCCcEEEE
Q 035064 36 ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~ 54 (74)
+.|.|..+++.|.+|.++-
T Consensus 20 a~~LA~~la~~g~~VlliD 38 (263)
T 1hyq_A 20 TANLGVALAQLGHDVTIVD 38 (263)
T ss_dssp HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEE
Confidence 5899999999999998874
No 84
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=43.58 E-value=16 Score=22.60 Aligned_cols=18 Identities=17% Similarity=0.361 Sum_probs=15.7
Q ss_pred HHHHHHHHHHcCCCcEEEE
Q 035064 36 ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~ 54 (74)
+.|.|..+++.| +|.++-
T Consensus 18 a~~LA~~la~~g-~VlliD 35 (209)
T 3cwq_A 18 AVHLSAYLALQG-ETLLID 35 (209)
T ss_dssp HHHHHHHHHTTS-CEEEEE
T ss_pred HHHHHHHHHhcC-CEEEEE
Confidence 589999999999 988774
No 85
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=43.04 E-value=38 Score=21.40 Aligned_cols=27 Identities=22% Similarity=0.254 Sum_probs=20.1
Q ss_pred eEEecCChH-HHHHHHHHHcCCCcEEEE
Q 035064 28 ANYVLGGVA-RNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 28 ~~~~~GG~a-~N~A~~larLG~~~~lv~ 54 (74)
+-+.-||.| ...|..++|+|.++.++-
T Consensus 7 vvIIG~GpAGl~AA~~la~~g~~v~liE 34 (314)
T 4a5l_A 7 VVIIGSGPAAHTAAIYLGRSSLKPVMYE 34 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 344556654 467889999999999884
No 86
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=42.89 E-value=19 Score=23.12 Aligned_cols=24 Identities=38% Similarity=0.385 Sum_probs=19.4
Q ss_pred cCCh-----HHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGV-----ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~-----a~N~A~~larLG~~~~lv~~ 55 (74)
-||+ +.|.|..+++.|.+|.+|-.
T Consensus 45 KGGvGKTT~a~nLA~~la~~G~rVlliD~ 73 (298)
T 2oze_A 45 KGGVGKSKLSTMFAYLTDKLNLKVLMIDK 73 (298)
T ss_dssp SSSSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCchHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 5664 58999999999999888643
No 87
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=41.44 E-value=20 Score=24.19 Aligned_cols=19 Identities=21% Similarity=0.350 Sum_probs=17.1
Q ss_pred HHHHHHHHHHcCCCcEEEE
Q 035064 36 ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~ 54 (74)
++|.|..+++.|.+|.+|-
T Consensus 19 a~nLA~~LA~~G~rVLlID 37 (361)
T 3pg5_A 19 STNVAHYFALQGKRVLYVD 37 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEE
Confidence 4899999999999999884
No 88
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=40.94 E-value=21 Score=23.03 Aligned_cols=18 Identities=28% Similarity=0.222 Sum_probs=16.3
Q ss_pred HHHHHHHHHHcCCCcEEE
Q 035064 36 ARNVAECMSKLGAKPYMI 53 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv 53 (74)
+.|.|..+++.|.+|.++
T Consensus 22 a~nLA~~La~~G~~Vlli 39 (286)
T 2xj4_A 22 AVHLVTALLYGGAKVAVI 39 (286)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCcEEEE
Confidence 589999999999999876
No 89
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=40.51 E-value=5.2 Score=23.07 Aligned_cols=40 Identities=23% Similarity=0.283 Sum_probs=29.0
Q ss_pred CChHHHHHHHHHHcCCCcEEEEEecCChhcccHHhcCcccc
Q 035064 33 GGVARNVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 73 (74)
Q Consensus 33 GG~a~N~A~~larLG~~~~lv~~vG~D~~G~~~~~~~~~~~ 73 (74)
+|.+...+-.|+..|.++.+++.+|.-++ +.+++.||+-|
T Consensus 51 ~g~g~~~~~~l~~~gv~~vi~~~iG~~a~-~~L~~~GI~v~ 90 (124)
T 1eo1_A 51 GGAGIRTAQIIANNGVKAVIASSPGPNAF-EVLNELGIKIY 90 (124)
T ss_dssp SSCSTTHHHHHHHTTCCEEEECCSSHHHH-HHHHHHTCEEE
T ss_pred CCCCHHHHHHHHHCCCCEEEECCcCHHHH-HHHHHCCCEEE
Confidence 34444677788889999999999987655 34677777543
No 90
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=40.32 E-value=16 Score=19.84 Aligned_cols=25 Identities=16% Similarity=0.217 Sum_probs=18.2
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEE
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYM 52 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~l 52 (74)
+.+..|..+...|..|.++|.++..
T Consensus 61 vyC~~g~rs~~a~~~L~~~G~~v~~ 85 (100)
T 3foj_A 61 IICKAGGRSAQVVQYLEQNGVNAVN 85 (100)
T ss_dssp EECSSSHHHHHHHHHHHTTTCEEEE
T ss_pred EEcCCCchHHHHHHHHHHCCCCEEE
Confidence 3445677788888999999985443
No 91
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=40.27 E-value=42 Score=21.39 Aligned_cols=27 Identities=11% Similarity=0.113 Sum_probs=20.0
Q ss_pred EEecCChH-HHHHHHHHHcCCCcEEEEE
Q 035064 29 NYVLGGVA-RNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 29 ~~~~GG~a-~N~A~~larLG~~~~lv~~ 55 (74)
-+.-||.| ...|+.++|+|.++.++-+
T Consensus 10 vIIGaGpAGlsAA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 10 AVIGAGPAGLNASLVLGRARKQIALFDN 37 (304)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 44455544 4678899999999998864
No 92
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=40.05 E-value=6.4 Score=22.58 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=27.8
Q ss_pred HHHHHHHHcCCCcEEEEEecCChhcccHHhcCcccc
Q 035064 38 NVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 73 (74)
Q Consensus 38 N~A~~larLG~~~~lv~~vG~D~~G~~~~~~~~~~~ 73 (74)
..+-.|...|.++.+++.+|.-++ +.+++.|++-|
T Consensus 54 ~~~~~L~~~gv~~vi~~~iG~~a~-~~L~~~GI~v~ 88 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYGIGRRAI-EYFNSLGISVV 88 (121)
T ss_dssp HHHHHHHHTTCCEEECSBCCHHHH-HHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEECCCCHhHH-HHHHHCCCEEE
Confidence 777888889999999999987655 45777787644
No 93
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=39.13 E-value=19 Score=24.47 Aligned_cols=28 Identities=21% Similarity=0.188 Sum_probs=22.4
Q ss_pred eEEecCCh-----HHHHHHHHHHcCCCcEEEEE
Q 035064 28 ANYVLGGV-----ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~-----a~N~A~~larLG~~~~lv~~ 55 (74)
+...-||+ ++|.|..+++.|.+|.++..
T Consensus 20 ~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~ 52 (334)
T 3iqw_A 20 FVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLST 52 (334)
T ss_dssp EEECSTTSSHHHHHHHHHHHHTTSSSCEEEEEC
T ss_pred EEeCCCCccHHHHHHHHHHHHHhCCCcEEEEEC
Confidence 44446765 48999999999999999875
No 94
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=36.72 E-value=25 Score=21.14 Aligned_cols=25 Identities=20% Similarity=0.161 Sum_probs=19.5
Q ss_pred cCChHHHHHHHHHHc-----CCCcEEEEEe
Q 035064 32 LGGVARNVAECMSKL-----GAKPYMISAL 56 (74)
Q Consensus 32 ~GG~a~N~A~~larL-----G~~~~lv~~v 56 (74)
+||+..|+|..+..- +.++.+++-+
T Consensus 68 ~GGSp~n~a~~~~~~~~~~~~~~v~vI~Gv 97 (150)
T 3ipr_A 68 LSASPYNQAVLVINELEPALQKKIFVVSGT 97 (150)
T ss_dssp TTSHHHHHHHHHHTTSCHHHHTTEEEEESC
T ss_pred CCCCHHHHHHHHHHhhhhccCCCEEEEeCC
Confidence 899999999888754 5677777643
No 95
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=35.50 E-value=28 Score=22.40 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=22.5
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEEEEEecCCh
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYMISALGLDM 60 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~ 60 (74)
.-+..||.+..+|..|++.|.. -+..+-.|.
T Consensus 35 lVvG~Gg~G~~va~~La~~Gv~--~i~lvD~d~ 65 (249)
T 1jw9_B 35 LIVGLGGLGCAASQYLASAGVG--NLTLLDFDT 65 (249)
T ss_dssp EEECCSHHHHHHHHHHHHHTCS--EEEEECCCB
T ss_pred EEEeeCHHHHHHHHHHHHcCCC--eEEEEcCCC
Confidence 4556899999999999999973 223344454
No 96
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=35.50 E-value=26 Score=23.69 Aligned_cols=27 Identities=26% Similarity=0.383 Sum_probs=20.6
Q ss_pred eEEecCCh-----HHHHHHHHHHcCCCcEEEE
Q 035064 28 ANYVLGGV-----ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 28 ~~~~~GG~-----a~N~A~~larLG~~~~lv~ 54 (74)
+...-||+ ++|.|..+++.|.+|.++-
T Consensus 148 v~s~KGGvGKTT~a~nLA~~La~~g~rVlliD 179 (373)
T 3fkq_A 148 FTSPCGGVGTSTVAAACAIAHANMGKKVFYLN 179 (373)
T ss_dssp EECSSTTSSHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EECCCCCChHHHHHHHHHHHHHhCCCCEEEEE
Confidence 33335664 5799999999999999886
No 97
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=34.78 E-value=46 Score=20.70 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=20.4
Q ss_pred CChHHHHHHHHHHcCCCcEEEEEe
Q 035064 33 GGVARNVAECMSKLGAKPYMISAL 56 (74)
Q Consensus 33 GG~a~N~A~~larLG~~~~lv~~v 56 (74)
+|-+..+|..+++.|.++.++.+-
T Consensus 26 ~giG~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 26 RSIAYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp TSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcHHHHHHHHHHHcCCCEEEEecc
Confidence 567999999999999998887654
No 98
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=34.38 E-value=32 Score=24.66 Aligned_cols=21 Identities=14% Similarity=0.295 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHcCCCcEEEEE
Q 035064 35 VARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 35 ~a~N~A~~larLG~~~~lv~~ 55 (74)
.++|.|..+++.|.+|.+|+.
T Consensus 24 ~a~~lA~~lA~~G~rVLlvd~ 44 (589)
T 1ihu_A 24 ISCATAIRLAEQGKRVLLVST 44 (589)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHCCCcEEEEEC
Confidence 468999999999999999764
No 99
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=34.23 E-value=40 Score=22.43 Aligned_cols=28 Identities=25% Similarity=0.298 Sum_probs=22.4
Q ss_pred eEEecCChHHHHHHHHHHcCC-CcEEEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGA-KPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~-~~~lv~~ 55 (74)
..+..||.+.-++.+|.++|. ++.++.+
T Consensus 126 lvlGaGGaaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 126 VVLGSGGAARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEEEES
T ss_pred EEECCcHHHHHHHHHHHHcCCCEEEEEeC
Confidence 445689999999999999998 5666553
No 100
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=34.16 E-value=32 Score=24.91 Aligned_cols=29 Identities=21% Similarity=0.196 Sum_probs=24.1
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEEEEEe
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYMISAL 56 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~lv~~v 56 (74)
+.+..|..+.-.|+.+++.|.+|.++.+-
T Consensus 11 vVVGaG~AGl~AA~~la~~G~~V~vlEK~ 39 (588)
T 2wdq_A 11 VVIGAGGAGMRAALQISQSGQTCALLSKV 39 (588)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEECcCHHHHHHHHHHHHCCCcEEEEecC
Confidence 34556778889999999999999999884
No 101
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=33.60 E-value=37 Score=18.01 Aligned_cols=22 Identities=14% Similarity=0.019 Sum_probs=17.0
Q ss_pred eEEecCChHHHHHHHHHHcCCC
Q 035064 28 ANYVLGGVARNVAECMSKLGAK 49 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~ 49 (74)
+.+..|..+...|..|.++|.+
T Consensus 58 vyC~~g~rs~~a~~~L~~~G~~ 79 (94)
T 1wv9_A 58 LVCEKGLLSQVAALYLEAEGYE 79 (94)
T ss_dssp EECSSSHHHHHHHHHHHHHTCC
T ss_pred EEcCCCChHHHHHHHHHHcCCc
Confidence 3444577788888899999987
No 102
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=33.55 E-value=28 Score=22.63 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=22.0
Q ss_pred ecCChHHHHHHHHHHcCCCcEEEEE
Q 035064 31 VLGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 31 ~~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
+.||-|.-+|..+++.|.+|.+++.
T Consensus 32 SSg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 32 SSGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CccHHHHHHHHHHHHCCCEEEEEEC
Confidence 3578999999999999999999854
No 103
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=33.42 E-value=33 Score=25.22 Aligned_cols=29 Identities=21% Similarity=0.187 Sum_probs=24.6
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEEEEEe
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYMISAL 56 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~lv~~v 56 (74)
+.+..|..+.-.|+.+++.|.+|.++.+-
T Consensus 22 vVVG~G~AGl~AAl~aa~~G~~V~vlEK~ 50 (621)
T 2h88_A 22 VVVGAGGAGLRAAFGLSEAGFNTACVTKL 50 (621)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 44567778899999999999999999884
No 104
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=32.80 E-value=59 Score=20.02 Aligned_cols=24 Identities=25% Similarity=0.457 Sum_probs=19.7
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.||-+..+|..+++.|.++.++++
T Consensus 23 s~gIG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 23 SSGIGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CChHHHHHHHHHHHCCCEEEEEcC
Confidence 456688999999999999887764
No 105
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=32.14 E-value=70 Score=20.29 Aligned_cols=29 Identities=14% Similarity=0.106 Sum_probs=21.5
Q ss_pred eeEEecCC-hHHHHHHHHHHcCCCcEEEEE
Q 035064 27 KANYVLGG-VARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~~GG-~a~N~A~~larLG~~~~lv~~ 55 (74)
++-+.-|| .+...|..|++.|.++.++-+
T Consensus 18 dvvIIG~G~aGl~aA~~l~~~g~~v~lie~ 47 (319)
T 3cty_A 18 DVVIVGAGAAGFSAAVYAARSGFSVAILDK 47 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeC
Confidence 34444444 456788999999999999976
No 106
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=31.88 E-value=68 Score=20.89 Aligned_cols=28 Identities=32% Similarity=0.358 Sum_probs=21.0
Q ss_pred eEEecCCh-HHHHHHHHHHcCCCcEEEEE
Q 035064 28 ANYVLGGV-ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~-a~N~A~~larLG~~~~lv~~ 55 (74)
+-+.-||. +.-.|..|++.|.++.++=+
T Consensus 7 VvIvG~G~aGl~~A~~La~~G~~V~l~E~ 35 (397)
T 3cgv_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIEK 35 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEeC
Confidence 34444554 67889999999999988854
No 107
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=31.80 E-value=42 Score=23.25 Aligned_cols=23 Identities=13% Similarity=0.141 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCCcEEEEEecCC
Q 035064 36 ARNVAECMSKLGAKPYMISALGLD 59 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~~vG~D 59 (74)
++|.|..+++.|.+|.++.. -.-
T Consensus 19 a~~la~~la~~g~~vllvd~-~~~ 41 (374)
T 3igf_A 19 AIAAAKLLASQGKRVLLAGL-AEP 41 (374)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-SCS
T ss_pred HHHHHHHHHHCCCCeEEEeC-CCC
Confidence 58999999999999999998 443
No 108
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=31.62 E-value=56 Score=20.96 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=19.3
Q ss_pred eEEecCChHHHHHHHHHHcCCC
Q 035064 28 ANYVLGGVARNVAECMSKLGAK 49 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~ 49 (74)
.-...||.+..+|.+|++.|..
T Consensus 32 lvvG~GglG~~va~~La~~Gvg 53 (251)
T 1zud_1 32 LIIGLGGLGTPAALYLAGAGVG 53 (251)
T ss_dssp EEECCSTTHHHHHHHHHHTTCS
T ss_pred EEEccCHHHHHHHHHHHHcCCC
Confidence 4566999999999999999985
No 109
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=31.51 E-value=58 Score=23.68 Aligned_cols=29 Identities=21% Similarity=0.250 Sum_probs=21.3
Q ss_pred eeEEecCCh-HHHHHHHHHHcCCCcEEEEE
Q 035064 27 KANYVLGGV-ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~~GG~-a~N~A~~larLG~~~~lv~~ 55 (74)
++-+.-||. +.-.|..|+|.|.++.++-+
T Consensus 25 DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr 54 (591)
T 3i3l_A 25 KVAIIGGGPAGSVAGLTLHKLGHDVTIYER 54 (591)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHcCCCCEEEEcC
Confidence 455555554 56778899999999988854
No 110
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=31.30 E-value=42 Score=22.17 Aligned_cols=26 Identities=15% Similarity=0.076 Sum_probs=21.1
Q ss_pred EecCChHHHHHHHHHHcCCCcEEEEE
Q 035064 30 YVLGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 30 ~~~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
+..|-.+...|..|++.|.+|.++=+
T Consensus 10 IGaG~~Gl~~A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 10 VGGGPVGLATAWQVAERGHRVLVLER 35 (397)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred ECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 34555678999999999999998865
No 111
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=31.22 E-value=57 Score=20.64 Aligned_cols=29 Identities=21% Similarity=0.328 Sum_probs=21.9
Q ss_pred eeEEecCC-hHHHHHHHHHHcCCCcEEEEE
Q 035064 27 KANYVLGG-VARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~~GG-~a~N~A~~larLG~~~~lv~~ 55 (74)
++-+.-|| .+...|..|++.|.++.++-+
T Consensus 24 ~vvIIG~G~aGl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 24 KVTIIGSGPAAHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEec
Confidence 44444444 557889999999999999876
No 112
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=31.22 E-value=38 Score=18.78 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=25.4
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEEEEEecCChhcccHHhcCc
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYCWNTGNL 70 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~lv~~vG~D~~G~~~~~~~~ 70 (74)
+.+..|..+..+|..|.++|.++.. + .+.+ ..|+..|+
T Consensus 61 v~C~~G~rS~~aa~~L~~~G~~~~~---l-~GG~-~~W~~~g~ 98 (103)
T 3iwh_A 61 IVCAGGVRSAKVVEYLEANGIDAVN---V-EGGM-HAWGDEGL 98 (103)
T ss_dssp EECSSSSHHHHHHHHHHTTTCEEEE---E-TTHH-HHHCSSSC
T ss_pred EECCCCHHHHHHHHHHHHcCCCEEE---e-cChH-HHHHHCCC
Confidence 3445688889999999999997642 3 2211 25777665
No 113
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=30.80 E-value=65 Score=21.44 Aligned_cols=29 Identities=14% Similarity=0.124 Sum_probs=22.6
Q ss_pred eeEEecCChH------HHHHHHHHHcCCCcEEEEE
Q 035064 27 KANYVLGGVA------RNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~~GG~a------~N~A~~larLG~~~~lv~~ 55 (74)
++-+..||.| ..+|..|.+.|.++.|++.
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~ 38 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGT 38 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEEC
Confidence 4556778874 5678889999999999874
No 114
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=30.72 E-value=40 Score=22.79 Aligned_cols=29 Identities=14% Similarity=0.070 Sum_probs=23.0
Q ss_pred eEEecCChHHHHHHHHHHcCC-CcEEEEEe
Q 035064 28 ANYVLGGVARNVAECMSKLGA-KPYMISAL 56 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~-~~~lv~~v 56 (74)
..+..||.+.-+|.+|+++|. ++.++.+-
T Consensus 158 lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 158 TICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp EEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred EEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 344578999999999999998 67776654
No 115
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=30.34 E-value=34 Score=23.34 Aligned_cols=27 Identities=26% Similarity=0.238 Sum_probs=21.6
Q ss_pred EEecCCh-----HHHHHHHHH--HcCCCcEEEEE
Q 035064 29 NYVLGGV-----ARNVAECMS--KLGAKPYMISA 55 (74)
Q Consensus 29 ~~~~GG~-----a~N~A~~la--rLG~~~~lv~~ 55 (74)
...-||+ ++|.|..++ +.|.+|.++..
T Consensus 23 ~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~ 56 (348)
T 3io3_A 23 VGGKGGVGKTTTSSSVAVQLALAQPNEQFLLIST 56 (348)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEEC
T ss_pred EeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEEC
Confidence 3345664 589999999 89999999875
No 116
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=29.99 E-value=14 Score=21.90 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=27.2
Q ss_pred HHHHHHHHcCCCcEEEEEecCChhcccHHhcCcccc
Q 035064 38 NVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 73 (74)
Q Consensus 38 N~A~~larLG~~~~lv~~vG~D~~G~~~~~~~~~~~ 73 (74)
..+-.|+..|.++.+++.+|.-++ +.+++.||+-|
T Consensus 67 ~~a~~L~~~gv~vVI~g~IG~~a~-~~L~~~GI~v~ 101 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVRGIGRRAI-AAFEAMGVKVI 101 (136)
T ss_dssp CHHHHHHHTTCSEEECSCCCHHHH-HHHHHTTCEEE
T ss_pred HHHHHHHHCCCCEEEECCCCHHHH-HHHHHCCCEEE
Confidence 677778888999999999987655 45777787654
No 117
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=29.33 E-value=49 Score=19.47 Aligned_cols=24 Identities=21% Similarity=0.184 Sum_probs=18.1
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
+||+..|+|..+..-..++.+++-
T Consensus 71 ~GGSp~n~a~~~~~~~~~v~vi~G 94 (142)
T 3bed_A 71 XGGTPCNVAMMAMGTYPQLRVVAG 94 (142)
T ss_dssp TTSHHHHHHHHHTTTCTTEEEEES
T ss_pred CCCHHHHHHHHHhccCCCEEEEeC
Confidence 699999999888754446777753
No 118
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=28.98 E-value=59 Score=18.87 Aligned_cols=25 Identities=20% Similarity=0.154 Sum_probs=18.7
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEEe
Q 035064 32 LGGVARNVAECMSKLGAKPYMISAL 56 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~v 56 (74)
+||+..|+|..+..-..++.+++-+
T Consensus 68 ~GGSp~n~a~~~~~~~~~v~vi~Gv 92 (135)
T 1pdo_A 68 WGGSPFNAASRIVVDKEHYEVIAGV 92 (135)
T ss_dssp TTSHHHHHHHHHHTTCTTEEEEESC
T ss_pred CCCCHHHHHHHHHhccCCEEEEeCC
Confidence 6999999998887544467777543
No 119
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=28.48 E-value=88 Score=18.10 Aligned_cols=19 Identities=21% Similarity=0.204 Sum_probs=15.1
Q ss_pred hHHHHHHHHHHcCCCcEEE
Q 035064 35 VARNVAECMSKLGAKPYMI 53 (74)
Q Consensus 35 ~a~N~A~~larLG~~~~lv 53 (74)
.+...+..|.++|.++..+
T Consensus 86 rs~~aa~~L~~~G~~v~~l 104 (144)
T 3nhv_A 86 GATKAAAKFAQLGFRVKEL 104 (144)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEe
Confidence 6889999999999964433
No 120
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=28.34 E-value=37 Score=22.49 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=23.2
Q ss_pred eEEecCChHHHHHHHHHHcCC-CcEEEEEe
Q 035064 28 ANYVLGGVARNVAECMSKLGA-KPYMISAL 56 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~-~~~lv~~v 56 (74)
..+..||.+.-+|.+|.++|. ++.++.+-
T Consensus 121 lvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 121 LILGAGGASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp EEECCSHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred EEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 455689999999999999998 67766543
No 121
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=27.72 E-value=38 Score=21.29 Aligned_cols=26 Identities=31% Similarity=0.337 Sum_probs=19.9
Q ss_pred EEecCCh-----HHHHHHHHHHcCCCcEEEEE
Q 035064 29 NYVLGGV-----ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 29 ~~~~GG~-----a~N~A~~larLG~~~~lv~~ 55 (74)
.-.-||+ ++|.|.+++ .|.+|.++-.
T Consensus 33 ~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~ 63 (267)
T 3k9g_A 33 ASIKGGVGKSTSAIILATLLS-KNNKVLLIDM 63 (267)
T ss_dssp CCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEE
T ss_pred EeCCCCchHHHHHHHHHHHHH-CCCCEEEEEC
Confidence 3345665 589999999 8999988864
No 122
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=27.61 E-value=49 Score=21.34 Aligned_cols=25 Identities=36% Similarity=0.425 Sum_probs=19.1
Q ss_pred EecCC-hHHHHHHHHHHcCCCcEEEE
Q 035064 30 YVLGG-VARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 30 ~~~GG-~a~N~A~~larLG~~~~lv~ 54 (74)
+.-|| .+.-.|..|+|.|.+|.++=
T Consensus 9 IVGaGpaGl~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 9 VVGGGPGGSTAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EECcCHHHHHHHHHHHHCCCcEEEEe
Confidence 34444 45678899999999999883
No 123
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=27.52 E-value=68 Score=22.95 Aligned_cols=28 Identities=21% Similarity=0.237 Sum_probs=23.0
Q ss_pred eeEEecCCh-----HHHHHHHHHHcCCCcEEEE
Q 035064 27 KANYVLGGV-----ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 27 ~~~~~~GG~-----a~N~A~~larLG~~~~lv~ 54 (74)
.+....||+ ++|.|..+++.|.++.++.
T Consensus 330 ~~~~~~~g~Gktt~a~~lA~~l~~~g~~vllvD 362 (589)
T 1ihu_A 330 IMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTT 362 (589)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEecCCCCChhhHHHHHHHHHHHCCCcEEEEe
Confidence 355667887 7899999999999998873
No 124
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=27.49 E-value=34 Score=25.37 Aligned_cols=29 Identities=14% Similarity=0.029 Sum_probs=24.4
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEEEEEe
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYMISAL 56 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~lv~~v 56 (74)
+.+..|..+.-.|+.+++.|.+|.++.+-
T Consensus 9 vVIGgG~AGL~AAl~aae~G~~V~vlEK~ 37 (660)
T 2bs2_A 9 LVIGGGLAGLRAAVATQQKGLSTIVLSLI 37 (660)
T ss_dssp EEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEECchHHHHHHHHHHHHCCCcEEEEecc
Confidence 44557778899999999999999999874
No 125
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=27.42 E-value=36 Score=22.53 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=22.5
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEEEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
..+..||.+.-++.+|.++|.++.++.+
T Consensus 122 lvlGaGGaaraia~~L~~~G~~v~V~nR 149 (269)
T 3phh_A 122 LILGAGGSAKALACELKKQGLQVSVLNR 149 (269)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4567899999999999999966666544
No 126
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=27.28 E-value=56 Score=19.68 Aligned_cols=24 Identities=17% Similarity=-0.017 Sum_probs=21.1
Q ss_pred HHHHHHHHcCCCcEEEEEecCChh
Q 035064 38 NVAECMSKLGAKPYMISALGLDME 61 (74)
Q Consensus 38 N~A~~larLG~~~~lv~~vG~D~~ 61 (74)
=.+-.|..+|.++.....|+||..
T Consensus 44 ~L~~~L~~~G~~v~~~~iV~Dd~~ 67 (178)
T 3iwt_A 44 IIKQLLIENGHKIIGYSLVPDDKI 67 (178)
T ss_dssp HHHHHHHHTTCEEEEEEEECSCHH
T ss_pred HHHHHHHHCCCEEEEEEEeCCCHH
Confidence 367889999999999999999864
No 127
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=27.00 E-value=57 Score=20.86 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=20.0
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.|-.+.-.|..|++.|.+|.++-+
T Consensus 12 ~G~~Gl~~A~~La~~G~~V~vlE~ 35 (369)
T 3dme_A 12 AGVVGLAIARALAAGGHEVLVAEA 35 (369)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeC
Confidence 444678899999999999999865
No 128
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=26.04 E-value=1.3e+02 Score=20.55 Aligned_cols=28 Identities=21% Similarity=0.275 Sum_probs=21.2
Q ss_pred eeEEecCCh-HHHHHHHHHHcCCCcEEEE
Q 035064 27 KANYVLGGV-ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 27 ~~~~~~GG~-a~N~A~~larLG~~~~lv~ 54 (74)
++-+.-||. +...|..|+++|.++.++-
T Consensus 22 dVvIIGgG~aGl~aA~~la~~G~~V~liE 50 (478)
T 3dk9_A 22 DYLVIGGGSGGLASARRAAELGARAAVVE 50 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 444555554 4578899999999999997
No 129
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=25.88 E-value=1e+02 Score=19.23 Aligned_cols=29 Identities=24% Similarity=0.195 Sum_probs=21.1
Q ss_pred eeEEe-cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 27 KANYV-LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~-~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
++-+. .|-.+...|..|++.|.++.++-+
T Consensus 17 ~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 17 DVIIVGLGPAAYGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECccHHHHHHHHHHHHCCCcEEEEec
Confidence 33344 444556889999999999998876
No 130
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=25.73 E-value=77 Score=19.75 Aligned_cols=23 Identities=13% Similarity=0.143 Sum_probs=18.2
Q ss_pred CChHHHHHHHHHHcCCCcEE-EEE
Q 035064 33 GGVARNVAECMSKLGAKPYM-ISA 55 (74)
Q Consensus 33 GG~a~N~A~~larLG~~~~l-v~~ 55 (74)
|=.+...|..|++.|.++.+ +-+
T Consensus 13 G~aGl~aA~~l~~~g~~v~li~e~ 36 (315)
T 3r9u_A 13 GPAGLSAGLYATRGGLKNVVMFEK 36 (315)
T ss_dssp SHHHHHHHHHHHHHTCSCEEEECS
T ss_pred CHHHHHHHHHHHHCCCCeEEEEeC
Confidence 33456788899999999999 765
No 131
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=25.65 E-value=92 Score=20.56 Aligned_cols=42 Identities=12% Similarity=-0.069 Sum_probs=27.7
Q ss_pred EEecCChHHH-HHHHHHHcCCCcEEEEEecCChhcccHHhcCc
Q 035064 29 NYVLGGVARN-VAECMSKLGAKPYMISALGLDMEIYCWNTGNL 70 (74)
Q Consensus 29 ~~~~GG~a~N-~A~~larLG~~~~lv~~vG~D~~G~~~~~~~~ 70 (74)
.+..||.+.- +|..|.++|.+|...=.--....-+.+++.|+
T Consensus 9 ~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi 51 (326)
T 3eag_A 9 IIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGI 51 (326)
T ss_dssp EESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTC
T ss_pred EEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCC
Confidence 4668999994 89999999999875432111222335666665
No 132
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=25.62 E-value=52 Score=23.91 Aligned_cols=28 Identities=25% Similarity=0.194 Sum_probs=23.5
Q ss_pred EEecCChHHHHHHHHHHcC--CCcEEEEEe
Q 035064 29 NYVLGGVARNVAECMSKLG--AKPYMISAL 56 (74)
Q Consensus 29 ~~~~GG~a~N~A~~larLG--~~~~lv~~v 56 (74)
-+..|..+.-.|+.|++.| .+|.++.+-
T Consensus 10 IVG~G~AGl~aAl~la~~G~~~~V~vlEk~ 39 (602)
T 1kf6_A 10 IVGAGGAGLRAAIAAAQANPNAKIALISKV 39 (602)
T ss_dssp EECCSHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred EECCCHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 4556678889999999999 999999874
No 133
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=25.56 E-value=89 Score=20.27 Aligned_cols=24 Identities=21% Similarity=0.195 Sum_probs=18.7
Q ss_pred EecCC-hHHHHHHHHHHcCCCcEEE
Q 035064 30 YVLGG-VARNVAECMSKLGAKPYMI 53 (74)
Q Consensus 30 ~~~GG-~a~N~A~~larLG~~~~lv 53 (74)
+.-|| .+.-.|..|+|.|.++.++
T Consensus 6 IVGaGpaGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 6 IIGAGIGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred EECcCHHHHHHHHHHHhCCCCEEEE
Confidence 44444 5667899999999999887
No 134
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=25.56 E-value=56 Score=22.02 Aligned_cols=28 Identities=14% Similarity=0.132 Sum_probs=22.1
Q ss_pred eEEecCChHHHHHHHHHHcCC-CcEEEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGA-KPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~-~~~lv~~ 55 (74)
..+..||.+.-++.+|+++|. ++.++.+
T Consensus 152 lVlGAGGaaraia~~L~~~G~~~v~v~nR 180 (312)
T 3t4e_A 152 VLLGAGGAATAIGAQAAIEGIKEIKLFNR 180 (312)
T ss_dssp EEECCSHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred EEECcCHHHHHHHHHHHHcCCCEEEEEEC
Confidence 345679999999999999998 5666555
No 135
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=25.43 E-value=84 Score=19.84 Aligned_cols=24 Identities=17% Similarity=0.263 Sum_probs=19.9
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.||-+..+|..|++-|.++.++++
T Consensus 30 s~gIG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 30 SRGLGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 456788999999999999887754
No 136
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=25.28 E-value=67 Score=19.80 Aligned_cols=24 Identities=13% Similarity=0.159 Sum_probs=19.6
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.|=.+.-.|..|+++|.++.++-+
T Consensus 11 gG~aGl~aA~~la~~g~~v~lie~ 34 (232)
T 2cul_A 11 AGFSGAETAFWLAQKGVRVGLLTQ 34 (232)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCHHHHHHHHHHHHCCCCEEEEec
Confidence 334577889999999999999875
No 137
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=25.13 E-value=42 Score=22.15 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=21.2
Q ss_pred eEEecCChHHHHHHHHHHcCCC-cEEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGAK-PYMIS 54 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~-~~lv~ 54 (74)
..+..||.+.-++.+|+++|.+ +.++.
T Consensus 131 lVlGaGG~g~aia~~L~~~G~~~v~i~~ 158 (283)
T 3jyo_A 131 VQVGAGGVGNAVAYALVTHGVQKLQVAD 158 (283)
T ss_dssp EEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEECCcHHHHHHHHHHHHCCCCEEEEEE
Confidence 3456799999999999999985 65543
No 138
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=25.09 E-value=57 Score=24.42 Aligned_cols=27 Identities=15% Similarity=0.106 Sum_probs=21.6
Q ss_pred EecCChHHHHHHHHHHcCCCcEEEEEe
Q 035064 30 YVLGGVARNVAECMSKLGAKPYMISAL 56 (74)
Q Consensus 30 ~~~GG~a~N~A~~larLG~~~~lv~~v 56 (74)
+..|-.+.-.|.+++|.|.+|.++.+-
T Consensus 27 IGgG~AGl~AAlaLAr~G~kVlLIEk~ 53 (641)
T 3cp8_A 27 VGAGHAGCEAALAVARGGLHCLLITSD 53 (641)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred ECccHHHHHHHHHHHHCCCcEEEEEec
Confidence 344556778899999999999999863
No 139
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=24.94 E-value=43 Score=22.85 Aligned_cols=29 Identities=7% Similarity=0.085 Sum_probs=21.6
Q ss_pred eeEEecCCh-HHHHHHHHHHcCCCcEEEEE
Q 035064 27 KANYVLGGV-ARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 27 ~~~~~~GG~-a~N~A~~larLG~~~~lv~~ 55 (74)
++-+.-||. +.-.|..|++.|.+|.++-+
T Consensus 24 ~ViIVGaGpaGl~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 24 RIGIVGAGTAGLHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEECCcHHHHHHHHHHHHCCCeEEEEcC
Confidence 344444444 56789999999999999975
No 140
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=24.79 E-value=65 Score=20.95 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=19.6
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.|=.+..+|..|++.|.+|.++-+
T Consensus 11 aG~~Gl~~A~~La~~G~~V~vie~ 34 (389)
T 2gf3_A 11 AGSMGMAAGYQLAKQGVKTLLVDA 34 (389)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeC
Confidence 344678899999999999998854
No 141
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=24.28 E-value=67 Score=21.02 Aligned_cols=28 Identities=21% Similarity=0.226 Sum_probs=22.3
Q ss_pred eEEecCChHHHHHHHHHHcCC-CcEEEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGA-KPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~-~~~lv~~ 55 (74)
..+..||.+.-++.+|.++|. ++.++.+
T Consensus 123 lvlGaGgaarav~~~L~~~G~~~i~v~nR 151 (271)
T 1npy_A 123 IVHGSGGMAKAVVAAFKNSGFEKLKIYAR 151 (271)
T ss_dssp EEECSSTTHHHHHHHHHHTTCCCEEEECS
T ss_pred EEECCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence 456789999999999999997 5655543
No 142
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=24.09 E-value=85 Score=19.69 Aligned_cols=21 Identities=14% Similarity=0.227 Sum_probs=17.2
Q ss_pred CChHHHHHHHHHHcCCCcEEE
Q 035064 33 GGVARNVAECMSKLGAKPYMI 53 (74)
Q Consensus 33 GG~a~N~A~~larLG~~~~lv 53 (74)
|=.+...|..|++.|.++.++
T Consensus 10 G~aGl~aA~~l~~~g~~v~li 30 (310)
T 1fl2_A 10 GPAGAAAAIYSARKGIRTGLM 30 (310)
T ss_dssp SHHHHHHHHHHHTTTCCEEEE
T ss_pred CHHHHHHHHHHHHCCCcEEEE
Confidence 334568899999999999988
No 143
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=23.96 E-value=61 Score=21.13 Aligned_cols=26 Identities=12% Similarity=0.111 Sum_probs=21.5
Q ss_pred EecCChHHHHHHHHHHcCCCcEEEEE
Q 035064 30 YVLGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 30 ~~~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
+..|-.+.-+|..|++.|.+|.++-+
T Consensus 12 IG~Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 12 LGSGVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ECCCHHHHHHHHHHHhCCCEEEEEec
Confidence 44555788999999999999999865
No 144
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=23.83 E-value=21 Score=20.19 Aligned_cols=22 Identities=14% Similarity=0.155 Sum_probs=16.7
Q ss_pred eEEecCCh--HHHHHHHHHHcCCC
Q 035064 28 ANYVLGGV--ARNVAECMSKLGAK 49 (74)
Q Consensus 28 ~~~~~GG~--a~N~A~~larLG~~ 49 (74)
+.+..|.. +..+|..|.++|.+
T Consensus 76 vyC~~g~r~~s~~a~~~L~~~G~~ 99 (124)
T 3flh_A 76 VYDWTGGTTLGKTALLVLLSAGFE 99 (124)
T ss_dssp EECSSSSCSHHHHHHHHHHHHTCE
T ss_pred EEeCCCCchHHHHHHHHHHHcCCe
Confidence 33445665 78899999999996
No 145
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=23.83 E-value=46 Score=21.47 Aligned_cols=24 Identities=21% Similarity=0.209 Sum_probs=20.0
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.||.+..+|..|++.|.++.++.+
T Consensus 128 aGGiG~aia~~L~~~G~~V~i~~R 151 (287)
T 1lu9_A 128 TGPVGMRSAALLAGEGAEVVLCGR 151 (287)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcHHHHHHHHHHHHCcCEEEEEEC
Confidence 578899999999999998666554
No 146
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=23.73 E-value=92 Score=19.26 Aligned_cols=26 Identities=12% Similarity=0.010 Sum_probs=21.6
Q ss_pred HHHHHHHHHHcCCCcEEEEEecCChh
Q 035064 36 ARNVAECMSKLGAKPYMISALGLDME 61 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv~~vG~D~~ 61 (74)
+.-.+..|..+|.++.....|+||..
T Consensus 25 ~~~l~~~L~~~G~~v~~~~iv~Dd~~ 50 (172)
T 3kbq_A 25 AAFIGNFLTYHGYQVRRGFVVMDDLD 50 (172)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECSCHH
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHH
Confidence 34567788899999999999999864
No 147
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=23.66 E-value=42 Score=23.97 Aligned_cols=29 Identities=10% Similarity=-0.028 Sum_probs=23.1
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEEEEEec
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYMISALG 57 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~lv~~vG 57 (74)
+.+..|..+.-.|+.+++ |.+|.++.+-.
T Consensus 12 vVVG~G~AGl~aAl~la~-G~~V~vlEk~~ 40 (540)
T 1chu_A 12 LIIGSGAAGLSLALRLAD-QHQVIVLSKGP 40 (540)
T ss_dssp EEECCSHHHHHHHHHHTT-TSCEEEECSSC
T ss_pred EEECccHHHHHHHHHHhc-CCcEEEEECCC
Confidence 345567778899999999 99999998743
No 148
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=23.61 E-value=1e+02 Score=19.70 Aligned_cols=28 Identities=11% Similarity=0.106 Sum_probs=19.8
Q ss_pred eeEEecCCh-HHHHHHHHHHcCCCcEEEE
Q 035064 27 KANYVLGGV-ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 27 ~~~~~~GG~-a~N~A~~larLG~~~~lv~ 54 (74)
++-+.-||. +...|..|++.|.++.++-
T Consensus 16 ~vvIIG~G~aGl~aA~~l~~~g~~v~lie 44 (335)
T 2a87_A 16 DVIVIGSGPAGYTAALYAARAQLAPLVFE 44 (335)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCCCEEEC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 344444444 4577888999999999886
No 149
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=23.60 E-value=89 Score=22.82 Aligned_cols=28 Identities=25% Similarity=0.074 Sum_probs=22.8
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEEEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
+.+..|-.+.-+|..|++.|.+|.++-+
T Consensus 268 vIIGgGiaGlsaA~~La~~G~~V~vlEk 295 (689)
T 3pvc_A 268 AIIGGGIVSALTALALQRRGAVVTLYCA 295 (689)
T ss_dssp EEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred EEECCcHHHHHHHHHHHHCCCcEEEEeC
Confidence 3445666778999999999999999976
No 150
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=23.31 E-value=18 Score=20.00 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=18.7
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYMI 53 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~lv 53 (74)
+.+..|..+...|..|.++|.++..+
T Consensus 60 vyC~~G~rs~~aa~~L~~~G~~v~~l 85 (108)
T 3gk5_A 60 VICAHGNRSAAAVEFLSQLGLNIVDV 85 (108)
T ss_dssp EECSSSHHHHHHHHHHHTTTCCEEEE
T ss_pred EEcCCCcHHHHHHHHHHHcCCCEEEE
Confidence 33456667888889999999865543
No 151
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=23.21 E-value=66 Score=24.12 Aligned_cols=26 Identities=23% Similarity=0.197 Sum_probs=20.8
Q ss_pred EecCChHHHHHHHHHHcCCCcEEEEE
Q 035064 30 YVLGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 30 ~~~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
+..|-.+.-.|.+++|.|.+|.++.+
T Consensus 33 IGgG~AGl~AAlalAr~G~kVlLIEk 58 (637)
T 2zxi_A 33 IGGGHAGIEAALAAARMGAKTAMFVL 58 (637)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEEe
Confidence 33444667889999999999999975
No 152
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=23.21 E-value=74 Score=20.59 Aligned_cols=28 Identities=21% Similarity=0.376 Sum_probs=22.3
Q ss_pred eEEecCChHHHHHHHHHHcCC-CcEEEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGA-KPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~-~~~lv~~ 55 (74)
..+..||.+.-++.+|.++|. ++.++.+
T Consensus 112 liiGaGg~a~ai~~~L~~~G~~~I~v~nR 140 (253)
T 3u62_A 112 VVVGAGGAARAVIYALLQMGVKDIWVVNR 140 (253)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCCEEEEES
T ss_pred EEECcHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 345689999999999999998 6665554
No 153
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=23.20 E-value=49 Score=21.31 Aligned_cols=26 Identities=19% Similarity=0.152 Sum_probs=20.6
Q ss_pred EEecCChHHHHHHHHHHcCCCcEEEE
Q 035064 29 NYVLGGVARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 29 ~~~~GG~a~N~A~~larLG~~~~lv~ 54 (74)
.+..||.+.-+|..|++.|.++.++.
T Consensus 124 ViGaGg~g~a~a~~L~~~G~~V~v~~ 149 (271)
T 1nyt_A 124 LIGAGGASRGVLLPLLSLDCAVTITN 149 (271)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EECCcHHHHHHHHHHHHcCCEEEEEE
Confidence 45578999999999999997665543
No 154
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=23.08 E-value=40 Score=21.80 Aligned_cols=28 Identities=11% Similarity=0.050 Sum_probs=21.9
Q ss_pred eEEecCChHHHHHHHHHHcCCCcEEEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
..+..||.+.-+|.+|++.|.++.++.+
T Consensus 123 lvlGaGg~g~a~a~~L~~~G~~v~v~~R 150 (272)
T 1p77_A 123 LILGAGGATKGVLLPLLQAQQNIVLANR 150 (272)
T ss_dssp EEECCSHHHHTTHHHHHHTTCEEEEEES
T ss_pred EEECCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 3455789999999999999976666544
No 155
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=22.82 E-value=65 Score=22.90 Aligned_cols=26 Identities=19% Similarity=0.210 Sum_probs=21.3
Q ss_pred EecCChHHHHHHHHHHcCCCcEEEEE
Q 035064 30 YVLGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 30 ~~~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
+..|..+.-.|+.|++.|.+|.++-+
T Consensus 127 VG~G~aGl~aA~~la~~G~~V~vlEk 152 (566)
T 1qo8_A 127 VGAGSAGFNASLAAKKAGANVILVDK 152 (566)
T ss_dssp ECCSHHHHHHHHHHHHHTCCEEEECS
T ss_pred ECCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 44566788899999999999999865
No 156
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=22.77 E-value=71 Score=22.34 Aligned_cols=28 Identities=11% Similarity=0.009 Sum_probs=22.0
Q ss_pred EEecCChHHHHHHHHHHcCCCcEEEEEe
Q 035064 29 NYVLGGVARNVAECMSKLGAKPYMISAL 56 (74)
Q Consensus 29 ~~~~GG~a~N~A~~larLG~~~~lv~~v 56 (74)
.+..|..+.-.|+.+++.|.+|.++-+-
T Consensus 46 VVGaG~AGl~AA~~aa~~G~~V~vlEk~ 73 (510)
T 4at0_A 46 VAGYGIAGVAASIEAARAGADVLVLERT 73 (510)
T ss_dssp EECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3445567789999999999999998653
No 157
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=22.38 E-value=60 Score=21.03 Aligned_cols=24 Identities=21% Similarity=0.260 Sum_probs=19.7
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.|=.+..+|..|++.|.+|.++-+
T Consensus 10 ~Gi~Gl~~A~~La~~G~~V~vle~ 33 (372)
T 2uzz_A 10 SGSVGAAAGYYATRAGLNVLMTDA 33 (372)
T ss_dssp TTHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCHHHHHHHHHHHHCCCeEEEEec
Confidence 444678899999999999998854
No 158
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=22.15 E-value=74 Score=23.01 Aligned_cols=23 Identities=17% Similarity=0.211 Sum_probs=19.2
Q ss_pred CChHHHHHHHHHHcCCCcEEEEE
Q 035064 33 GGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 33 GG~a~N~A~~larLG~~~~lv~~ 55 (74)
|=.+...|..++|.|.+|.++-.
T Consensus 10 G~AG~~AA~~la~~G~~V~liE~ 32 (443)
T 3g5s_A 10 GLAGSEAAWTLLRLGVPVRLFEM 32 (443)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECC
T ss_pred hHHHHHHHHHHHHCCCcEEEEec
Confidence 34467889999999999999964
No 159
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=21.95 E-value=72 Score=20.24 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=19.8
Q ss_pred CChHHHHHHHHHHcCCCcEEEEE
Q 035064 33 GGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 33 GG~a~N~A~~larLG~~~~lv~~ 55 (74)
||-+..+|..+++.|.++.++++
T Consensus 33 ~gIG~~ia~~l~~~G~~V~~~~r 55 (285)
T 2p91_A 33 RSIAYGIAKSFHREGAQLAFTYA 55 (285)
T ss_dssp TSHHHHHHHHHHHTTCEEEEEES
T ss_pred CcHHHHHHHHHHHcCCEEEEEeC
Confidence 57799999999999999887764
No 160
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=21.84 E-value=64 Score=21.26 Aligned_cols=28 Identities=18% Similarity=0.092 Sum_probs=22.1
Q ss_pred eEEecCChHHHHHHHHHHcCC-CcEEEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGA-KPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~-~~~lv~~ 55 (74)
..+..||.+.-++.+|+++|. ++.++.+
T Consensus 130 lvlGaGg~g~aia~~L~~~G~~~v~v~~R 158 (281)
T 3o8q_A 130 LLIGAGGAARGVLKPLLDQQPASITVTNR 158 (281)
T ss_dssp EEECCSHHHHHHHHHHHTTCCSEEEEEES
T ss_pred EEECchHHHHHHHHHHHhcCCCeEEEEEC
Confidence 345678999999999999996 6766654
No 161
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=21.83 E-value=71 Score=19.93 Aligned_cols=24 Identities=13% Similarity=0.163 Sum_probs=20.5
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.||-+..+|..|++.|.++.++++
T Consensus 9 s~gIG~aia~~l~~~G~~V~~~~r 32 (248)
T 3asu_A 9 TAGFGECITRRFIQQGHKVIATGR 32 (248)
T ss_dssp TSTTHHHHHHHHHHTTCEEEEEES
T ss_pred CChHHHHHHHHHHHCCCEEEEEeC
Confidence 478899999999999999887754
No 162
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=21.81 E-value=83 Score=21.74 Aligned_cols=28 Identities=14% Similarity=0.089 Sum_probs=21.2
Q ss_pred eEEecCC-hHHHHHHHHHHcCCCcEEEEE
Q 035064 28 ANYVLGG-VARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 28 ~~~~~GG-~a~N~A~~larLG~~~~lv~~ 55 (74)
+-+.-|| .+...|..|+++|.++.++-+
T Consensus 29 VvVIGgG~aGl~aA~~la~~G~~V~liEk 57 (484)
T 3o0h_A 29 LFVIGSGSGGVRAARLAGALGKRVAIAEE 57 (484)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECcCHHHHHHHHHHHhCcCEEEEEeC
Confidence 3344444 456788999999999999987
No 163
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=21.73 E-value=55 Score=21.49 Aligned_cols=28 Identities=14% Similarity=0.113 Sum_probs=21.8
Q ss_pred eEEecCChHHHHHHHHHHcCC-CcEEEEE
Q 035064 28 ANYVLGGVARNVAECMSKLGA-KPYMISA 55 (74)
Q Consensus 28 ~~~~~GG~a~N~A~~larLG~-~~~lv~~ 55 (74)
..+..||.+.-++.+|+++|. ++.++.+
T Consensus 124 lvlGaGg~~~aia~~L~~~G~~~v~i~~R 152 (272)
T 3pwz_A 124 LLLGAGGAVRGALLPFLQAGPSELVIANR 152 (272)
T ss_dssp EEECCSHHHHHHHHHHHHTCCSEEEEECS
T ss_pred EEECccHHHHHHHHHHHHcCCCEEEEEeC
Confidence 345678999999999999996 6666544
No 164
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=21.72 E-value=74 Score=19.89 Aligned_cols=23 Identities=22% Similarity=0.239 Sum_probs=20.1
Q ss_pred CChHHHHHHHHHHcCCCcEEEEE
Q 035064 33 GGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 33 GG~a~N~A~~larLG~~~~lv~~ 55 (74)
||-+..+|..+++.|.++.++++
T Consensus 21 ~gIG~~ia~~l~~~G~~V~~~~r 43 (265)
T 1qsg_A 21 LSIAYGIAQAMHREGAELAFTYQ 43 (265)
T ss_dssp TSHHHHHHHHHHHTTCEEEEEES
T ss_pred CCHHHHHHHHHHHCCCEEEEEcC
Confidence 67899999999999999887764
No 165
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=21.70 E-value=75 Score=22.55 Aligned_cols=27 Identities=26% Similarity=0.226 Sum_probs=21.9
Q ss_pred EEecCChHHHHHHHHHHcCCCcEEEEE
Q 035064 29 NYVLGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 29 ~~~~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.+..|..+.-.|+.+++.|.+|.++-+
T Consensus 131 VVGaG~aGl~aA~~la~~G~~V~vlEk 157 (571)
T 1y0p_A 131 VVGSGGAGFSAAISATDSGAKVILIEK 157 (571)
T ss_dssp EECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred EECCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 444666788899999999999999854
No 166
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=21.70 E-value=56 Score=20.06 Aligned_cols=24 Identities=17% Similarity=0.349 Sum_probs=20.2
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.||.+..+|..|++.|.++.++++
T Consensus 20 sggiG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 20 GSGIGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 567789999999999999877754
No 167
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=21.45 E-value=57 Score=19.82 Aligned_cols=24 Identities=17% Similarity=0.296 Sum_probs=20.8
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.||.+..++..|++.|.++.++++
T Consensus 10 sg~iG~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 10 ASGIGAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcHHHHHHHHHHHhCCCEEEEEeC
Confidence 478899999999999999888765
No 168
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=20.99 E-value=5.2 Score=26.27 Aligned_cols=14 Identities=14% Similarity=0.278 Sum_probs=11.2
Q ss_pred HHHcCCCcEEEEEe
Q 035064 43 MSKLGAKPYMISAL 56 (74)
Q Consensus 43 larLG~~~~lv~~v 56 (74)
|.+.|.++.++-.+
T Consensus 28 L~~~GV~~~~v~~~ 41 (312)
T 2yxt_A 28 LQVLGFEIDAVNSV 41 (312)
T ss_dssp HHHTTCEEEEEEEE
T ss_pred HHHcCCeEEEEEEE
Confidence 88889988887665
No 169
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=20.85 E-value=73 Score=22.98 Aligned_cols=27 Identities=19% Similarity=0.187 Sum_probs=19.7
Q ss_pred eEEecCCh-HHHHHHHHHHcCCCcEEEE
Q 035064 28 ANYVLGGV-ARNVAECMSKLGAKPYMIS 54 (74)
Q Consensus 28 ~~~~~GG~-a~N~A~~larLG~~~~lv~ 54 (74)
+-+.-+|+ +...|..++++|.+|.+|=
T Consensus 45 viVIG~GpaG~~aA~~aa~~G~kValIE 72 (542)
T 4b1b_A 45 YVVIGGGPGGMASAKEAAAHGARVLLFD 72 (542)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 33444444 4577899999999999983
No 170
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=20.85 E-value=73 Score=19.92 Aligned_cols=23 Identities=13% Similarity=0.131 Sum_probs=20.1
Q ss_pred CChHHHHHHHHHHcCCCcEEEEE
Q 035064 33 GGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 33 GG~a~N~A~~larLG~~~~lv~~ 55 (74)
||-+..+|..|++.|.++.++++
T Consensus 20 ~gIG~~ia~~l~~~G~~V~~~~r 42 (261)
T 2wyu_A 20 RSLGFAIAAKLKEAGAEVALSYQ 42 (261)
T ss_dssp SSHHHHHHHHHHHHTCEEEEEES
T ss_pred CcHHHHHHHHHHHCCCEEEEEcC
Confidence 68899999999999999887764
No 171
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=20.72 E-value=1.1e+02 Score=19.16 Aligned_cols=23 Identities=9% Similarity=0.161 Sum_probs=18.3
Q ss_pred CChHHHHHHHHHHcCC-CcEEEEE
Q 035064 33 GGVARNVAECMSKLGA-KPYMISA 55 (74)
Q Consensus 33 GG~a~N~A~~larLG~-~~~lv~~ 55 (74)
|=.+...|..|++.|. ++.++-+
T Consensus 10 G~aGl~aA~~l~~~g~~~v~lie~ 33 (311)
T 2q0l_A 10 GPAGLSAGLYATRGGVKNAVLFEK 33 (311)
T ss_dssp SHHHHHHHHHHHHTTCSSEEEECS
T ss_pred cHHHHHHHHHHHHCCCCcEEEEcC
Confidence 3345678888999999 9999876
No 172
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=20.69 E-value=1.2e+02 Score=18.35 Aligned_cols=25 Identities=4% Similarity=-0.036 Sum_probs=20.9
Q ss_pred HHHHHHHHHcCCCcEEEEEecCChh
Q 035064 37 RNVAECMSKLGAKPYMISALGLDME 61 (74)
Q Consensus 37 ~N~A~~larLG~~~~lv~~vG~D~~ 61 (74)
.-.+..|.++|.++.....|+||..
T Consensus 31 ~~l~~~L~~~G~~v~~~~iv~Dd~~ 55 (172)
T 1mkz_A 31 HYLRDSAQEAGHHVVDKAIVKENRY 55 (172)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHH
T ss_pred HHHHHHHHHCCCeEeEEEEeCCCHH
Confidence 4467778888999999999999964
No 173
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=20.65 E-value=60 Score=19.98 Aligned_cols=24 Identities=25% Similarity=0.372 Sum_probs=20.3
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.||-+..+|..|++.|.++.++++
T Consensus 11 s~giG~~~a~~l~~~G~~V~~~~r 34 (239)
T 2ekp_A 11 SRGIGRAIAEALVARGYRVAIASR 34 (239)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 467889999999999999887754
No 174
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=20.61 E-value=1.1e+02 Score=16.67 Aligned_cols=27 Identities=11% Similarity=0.257 Sum_probs=21.7
Q ss_pred EEecCChHHHHHHHHHHcCCCcEEEEE
Q 035064 29 NYVLGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 29 ~~~~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
-+..|..+..+|..|.+.|.++.++..
T Consensus 11 I~G~G~iG~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 11 VIGLGRFGGSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp EECCSHHHHHHHHHHHHTTCCCEEEES
T ss_pred EECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 345688899999999999998887654
No 175
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=20.58 E-value=84 Score=21.87 Aligned_cols=27 Identities=19% Similarity=0.134 Sum_probs=22.5
Q ss_pred EecCChHHHHHHHHHHcCCCcEEEEEe
Q 035064 30 YVLGGVARNVAECMSKLGAKPYMISAL 56 (74)
Q Consensus 30 ~~~GG~a~N~A~~larLG~~~~lv~~v 56 (74)
+..|..+.-.|+.+++.|.+|.++.+-
T Consensus 5 IG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 5 IGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 445667888999999999999999875
No 176
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=20.57 E-value=64 Score=19.64 Aligned_cols=18 Identities=17% Similarity=0.185 Sum_probs=15.6
Q ss_pred HHHHHHHHHHcCCCcEEE
Q 035064 36 ARNVAECMSKLGAKPYMI 53 (74)
Q Consensus 36 a~N~A~~larLG~~~~lv 53 (74)
-.|++.++.+||.++.++
T Consensus 15 ~~si~~al~~~G~~~~v~ 32 (211)
T 4gud_A 15 ISSVKFAIERLGYAVTIS 32 (211)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEE
Confidence 378999999999998875
No 177
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=20.35 E-value=61 Score=20.18 Aligned_cols=24 Identities=21% Similarity=0.275 Sum_probs=20.2
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEE
Q 035064 32 LGGVARNVAECMSKLGAKPYMISA 55 (74)
Q Consensus 32 ~GG~a~N~A~~larLG~~~~lv~~ 55 (74)
.||-+..+|..|++-|.++.++++
T Consensus 23 s~gIG~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 23 TDGIGLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 467789999999999999887764
Done!