BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035086
(73 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65583|UKL4_ARATH Uridine kinase-like protein 4 OS=Arabidopsis thaliana GN=UKL4 PE=1
SV=2
Length = 469
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/49 (91%), Positives = 47/49 (95%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDD 64
APQGVHVVCK FPR+KIVTSEID GLNE+FRVIPGMGEFGDRYFGTDDD
Sbjct: 421 APQGVHVVCKKFPRIKIVTSEIDNGLNEEFRVIPGMGEFGDRYFGTDDD 469
>sp|Q8VYB2|UKL3_ARATH Uridine kinase-like protein 3 OS=Arabidopsis thaliana GN=UKL3 PE=1
SV=1
Length = 466
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 48/49 (97%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDD 64
AP+GV+VVCK FPR+KIVTSEI++GLN++FRV+PGMGEFGDRYFGTDD+
Sbjct: 418 APEGVNVVCKKFPRIKIVTSEIELGLNDEFRVVPGMGEFGDRYFGTDDE 466
>sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic OS=Arabidopsis
thaliana GN=UKL1 PE=1 SV=1
Length = 486
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 46/51 (90%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDDQ 66
AP+G+H VCK FP LKIVTSEID LN++FRVIPG+GEFGDRYFGTD++DQ
Sbjct: 436 APEGIHCVCKRFPALKIVTSEIDQCLNQEFRVIPGLGEFGDRYFGTDEEDQ 486
>sp|Q9LK34|UKL2_ARATH Uridine kinase-like protein 2, chloroplastic OS=Arabidopsis
thaliana GN=UKL2 PE=1 SV=1
Length = 483
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDD 63
AP+G+H VCK FP+LKIVTSEID LNE+FRVIPG+GEFGDRYFGTD+
Sbjct: 436 APEGIHCVCKRFPKLKIVTSEIDQCLNEEFRVIPGLGEFGDRYFGTDE 483
>sp|Q9LTY6|UKL5_ARATH Uridine kinase-like protein 5 OS=Arabidopsis thaliana GN=UKL5 PE=2
SV=1
Length = 465
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 7/66 (10%)
Query: 10 VSESH-------QAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTD 62
V ESH APQG+H +CK FP LKIVTSEID LNED RVIPG+GEF DRYFGT+
Sbjct: 389 VPESHIIFLNLIAAPQGIHALCKKFPMLKIVTSEIDSSLNEDSRVIPGLGEFADRYFGTN 448
Query: 63 DDDQQV 68
+ + +V
Sbjct: 449 NINSKV 454
>sp|Q91YL3|UCKL1_MOUSE Uridine-cytidine kinase-like 1 OS=Mus musculus GN=Uckl1 PE=1 SV=1
Length = 548
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 11/74 (14%)
Query: 3 IFSSALCVSESHQAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTD 62
IF +L ++E GVH V +FPR++I+T+ +D +N+ FR+IPG+G FGDRYFGTD
Sbjct: 479 IFLLSLLMAE-----MGVHSVAYAFPRVRIITTAVDKRVNDLFRIIPGIGNFGDRYFGTD 533
Query: 63 ------DDDQQVVI 70
DDD+ +
Sbjct: 534 AVPDGSDDDEAATV 547
>sp|Q9NWZ5|UCKL1_HUMAN Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2
Length = 548
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 3 IFSSALCVSESHQAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTD 62
IF +L ++E GVH V +FPR++I+T+ +D +N+ FR+IPG+G FGDRYFGTD
Sbjct: 479 IFLLSLLMAE-----MGVHSVAYAFPRVRIITTAVDKRVNDLFRIIPGIGNFGDRYFGTD 533
>sp|Q26998|UPP_TOXGO Uracil phosphoribosyltransferase OS=Toxoplasma gondii GN=uprt PE=1
SV=1
Length = 244
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 37/46 (80%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
APQG+ V K +P++++VT+ +DI LN + ++PG+G+FGDRYFGT
Sbjct: 198 APQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGT 243
>sp|Q55GQ6|UPP_DICDI Uracil phosphoribosyltransferase OS=Dictyostelium discoideum
GN=uprt PE=3 SV=1
Length = 216
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDD 63
+P+G+ V +PR+K+VT EID LNE +IPG+G+FG+ YFGT+D
Sbjct: 169 SPEGIKVFTDKYPRVKVVTGEIDSHLNEKKYIIPGLGDFGNLYFGTED 216
>sp|Q7VZ79|UPP_BORPE Uracil phosphoribosyltransferase OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=upp PE=3 SV=1
Length = 213
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ V K+ P ++I T+ ID GLNE+ ++PG+G+ GDR FGT
Sbjct: 162 APEGIDAVLKAHPDVQIYTASIDQGLNENGYIMPGLGDAGDRIFGT 207
>sp|Q9HE15|UPP2_SCHPO Uracil phosphoribosyltransferase 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1399.04c PE=3 SV=1
Length = 220
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 18 QGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
+G+ V FP+L++VT+ ID LN + V+PG G+FGDRYFGT
Sbjct: 176 EGITNVFAKFPKLRMVTASIDPELNANKYVVPGCGDFGDRYFGT 219
>sp|Q88PV2|UPP_PSEPK Uracil phosphoribosyltransferase OS=Pseudomonas putida (strain
KT2440) GN=upp PE=3 SV=1
Length = 212
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDD 65
AP+G+ VV K+ P +KI T+ ID LNE ++PG+G+ GD+ FGT D
Sbjct: 162 APEGIEVVEKAHPDVKIYTASIDQRLNEHGYIVPGLGDAGDKIFGTKQKD 211
>sp|B0KNF7|UPP_PSEPG Uracil phosphoribosyltransferase OS=Pseudomonas putida (strain
GB-1) GN=upp PE=3 SV=1
Length = 212
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDD 65
AP+G+ VV K+ P +KI T+ ID LNE ++PG+G+ GD+ FGT D
Sbjct: 162 APEGIEVVEKAHPDVKIYTASIDQRLNEHGYIVPGLGDAGDKIFGTKQKD 211
>sp|A5VYH8|UPP_PSEP1 Uracil phosphoribosyltransferase OS=Pseudomonas putida (strain F1 /
ATCC 700007) GN=upp PE=3 SV=1
Length = 212
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDD 65
AP+G+ VV K+ P +KI T+ ID LNE ++PG+G+ GD+ FGT D
Sbjct: 162 APEGIEVVEKAHPDVKIYTASIDQRLNEHGYIVPGLGDAGDKIFGTKQKD 211
>sp|Q7WB58|UPP_BORPA Uracil phosphoribosyltransferase OS=Bordetella parapertussis
(strain 12822 / ATCC BAA-587 / NCTC 13253) GN=upp PE=3
SV=1
Length = 213
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ V + P ++I T+ ID GLNE+ ++PG+G+ GDR FGT
Sbjct: 162 APEGIDAVLTAHPDVQIYTASIDQGLNENGYIMPGLGDAGDRIFGT 207
>sp|Q7WMM5|UPP_BORBR Uracil phosphoribosyltransferase OS=Bordetella bronchiseptica
(strain ATCC BAA-588 / NCTC 13252 / RB50) GN=upp PE=3
SV=1
Length = 213
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ V + P ++I T+ ID GLNE+ ++PG+G+ GDR FGT
Sbjct: 162 APEGIDAVLTAHPDVQIYTASIDQGLNENGYIMPGLGDAGDRIFGT 207
>sp|Q1IEV9|UPP_PSEE4 Uracil phosphoribosyltransferase OS=Pseudomonas entomophila (strain
L48) GN=upp PE=3 SV=1
Length = 212
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDD 65
AP+G+ VV K+ P ++I T+ ID LNE ++PG+G+ GD+ FGT D
Sbjct: 162 APEGIEVVEKAHPDVQIYTASIDQRLNEHGYIVPGLGDAGDKIFGTKQKD 211
>sp|B2HDV9|UPP_MYCMM Uracil phosphoribosyltransferase OS=Mycobacterium marinum (strain
ATCC BAA-535 / M) GN=upp PE=3 SV=1
Length = 207
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 6 SALCVSESHQAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFG 60
+ LCV APQGV + K+ P ++ T ID GLNE+ ++PG+G+ GDR FG
Sbjct: 154 TVLCVV---AAPQGVAALEKAAPNARLFTVAIDDGLNEEAYIVPGLGDAGDRQFG 205
>sp|O13867|UPP1_SCHPO Uracil phosphoribosyltransferase 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1B3.01c PE=3 SV=1
Length = 219
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
+P+G+ V FP ++IVT+ ID GL+ + ++PG+G+FGD YFGT
Sbjct: 172 SPEGLKNVHDRFPNIRIVTAVIDEGLDNNGYIVPGLGDFGDIYFGT 217
>sp|B2GAT5|UPP_LACF3 Uracil phosphoribosyltransferase OS=Lactobacillus fermentum (strain
NBRC 3956 / LMG 18251) GN=upp PE=3 SV=1
Length = 211
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+GV V ++FP + I T+ +D LNED ++PG+G+ GDR FGT
Sbjct: 165 APEGVKAVQEAFPDVDIYTAGLDERLNEDGYIVPGLGDAGDRLFGT 210
>sp|B1JEN1|UPP_PSEPW Uracil phosphoribosyltransferase OS=Pseudomonas putida (strain
W619) GN=upp PE=3 SV=1
Length = 212
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDD 65
AP+G+ VV K+ P ++I T+ ID LNE ++PG+G+ GD+ FGT D
Sbjct: 162 APEGIDVVEKAHPDVQIYTASIDQRLNEHGYIVPGLGDAGDKIFGTKQKD 211
>sp|Q2KWB3|UPP_BORA1 Uracil phosphoribosyltransferase OS=Bordetella avium (strain 197N)
GN=upp PE=3 SV=1
Length = 212
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ V + P + I T+ ID GLNE ++PG+G+ GDR FGT
Sbjct: 162 APEGIKAVLDAHPDVNIYTASIDQGLNEQGYIMPGLGDAGDRIFGT 207
>sp|C3KAJ8|UPP_PSEFS Uracil phosphoribosyltransferase OS=Pseudomonas fluorescens (strain
SBW25) GN=upp PE=3 SV=1
Length = 212
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDD 65
AP+G+ V K+ P ++I T+ ID LNE +IPG+G+ GD+ FGT D
Sbjct: 162 APEGIAAVEKAHPDVQIYTASIDERLNEHGYIIPGLGDAGDKIFGTKQKD 211
>sp|B5XNQ4|UPP_KLEP3 Uracil phosphoribosyltransferase OS=Klebsiella pneumoniae (strain
342) GN=upp PE=3 SV=1
Length = 208
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 1 MDIFSSALCVSESH----QAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGD 56
+D+ +A C S AP+G+ + K+ P +++ T+ +D GLNE +IPG+G+ GD
Sbjct: 143 IDLLKNAGCTSIKVLVLVAAPEGIAALEKAHPDVELYTASVDKGLNEHGYIIPGLGDAGD 202
Query: 57 RYFGT 61
+ FGT
Sbjct: 203 KIFGT 207
>sp|A6TCB0|UPP_KLEP7 Uracil phosphoribosyltransferase OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=upp PE=3
SV=1
Length = 208
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 1 MDIFSSALCVSESH----QAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGD 56
+D+ +A C S AP+G+ + K+ P +++ T+ +D GLNE +IPG+G+ GD
Sbjct: 143 IDLLKNAGCTSIKVLVLVAAPEGIAALEKAHPDVELYTASVDKGLNEHGYIIPGLGDAGD 202
Query: 57 RYFGT 61
+ FGT
Sbjct: 203 KIFGT 207
>sp|Q8RD94|UPP_THETN Uracil phosphoribosyltransferase OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=upp PE=3 SV=1
Length = 210
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ V K P + I + ID GLNE ++PG+G+ GDR FGT
Sbjct: 164 APEGIKAVHKDHPEVPIYVASIDQGLNEHGYIVPGLGDAGDRLFGT 209
>sp|P0A658|UPP_MYCTU Uracil phosphoribosyltransferase OS=Mycobacterium tuberculosis
GN=upp PE=3 SV=1
Length = 207
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 6 SALCVSESHQAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFG 60
+ LCV AP+G+ + K+ P +++ T+ ID GLNE ++PG+G+ GDR FG
Sbjct: 154 TVLCVV---AAPEGIAALQKAAPNVRLFTAAIDEGLNEVAYIVPGLGDAGDRQFG 205
>sp|A5U7Y3|UPP_MYCTA Uracil phosphoribosyltransferase OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=upp PE=3 SV=1
Length = 207
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 6 SALCVSESHQAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFG 60
+ LCV AP+G+ + K+ P +++ T+ ID GLNE ++PG+G+ GDR FG
Sbjct: 154 TVLCVV---AAPEGIAALQKAAPNVRLFTAAIDEGLNEVAYIVPGLGDAGDRQFG 205
>sp|A1KNZ5|UPP_MYCBP Uracil phosphoribosyltransferase OS=Mycobacterium bovis (strain BCG
/ Pasteur 1173P2) GN=upp PE=3 SV=1
Length = 207
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 6 SALCVSESHQAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFG 60
+ LCV AP+G+ + K+ P +++ T+ ID GLNE ++PG+G+ GDR FG
Sbjct: 154 TVLCVV---AAPEGIAALQKAAPNVRLFTAAIDEGLNEVAYIVPGLGDAGDRQFG 205
>sp|P0A659|UPP_MYCBO Uracil phosphoribosyltransferase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=upp PE=3 SV=1
Length = 207
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 6 SALCVSESHQAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFG 60
+ LCV AP+G+ + K+ P +++ T+ ID GLNE ++PG+G+ GDR FG
Sbjct: 154 TVLCVV---AAPEGIAALQKAAPNVRLFTAAIDEGLNEVAYIVPGLGDAGDRQFG 205
>sp|A8AD93|UPP_CITK8 Uracil phosphoribosyltransferase OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=upp PE=3 SV=1
Length = 208
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDKGLNEHGYIIPGLGDAGDKIFGT 207
>sp|A6USD4|UPP_METVS Uracil phosphoribosyltransferase OS=Methanococcus vannielii (strain
SB / ATCC 35089 / DSM 1224) GN=upp PE=3 SV=1
Length = 232
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFG 60
AP+G+ + K+FP ++I ++ID LN+D ++PG+G+ GDR FG
Sbjct: 173 APEGIDSIKKAFPDVEIFVTKIDRELNKDGYIVPGLGDAGDRAFG 217
>sp|P0A8F3|UPP_SHIFL Uracil phosphoribosyltransferase OS=Shigella flexneri GN=upp PE=3
SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|Q0T222|UPP_SHIF8 Uracil phosphoribosyltransferase OS=Shigella flexneri serotype 5b
(strain 8401) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|B2TXS3|UPP_SHIB3 Uracil phosphoribosyltransferase OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|A4WD70|UPP_ENT38 Uracil phosphoribosyltransferase OS=Enterobacter sp. (strain 638)
GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|B1LNE8|UPP_ECOSM Uracil phosphoribosyltransferase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|B6I570|UPP_ECOSE Uracil phosphoribosyltransferase OS=Escherichia coli (strain SE11)
GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|B7N680|UPP_ECOLU Uracil phosphoribosyltransferase OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|P0A8F0|UPP_ECOLI Uracil phosphoribosyltransferase OS=Escherichia coli (strain K12)
GN=upp PE=1 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|B1IWG2|UPP_ECOLC Uracil phosphoribosyltransferase OS=Escherichia coli (strain ATCC
8739 / DSM 1576 / Crooks) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|P0A8F1|UPP_ECOL6 Uracil phosphoribosyltransferase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|Q0TEZ0|UPP_ECOL5 Uracil phosphoribosyltransferase OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|A1ADZ1|UPP_ECOK1 Uracil phosphoribosyltransferase OS=Escherichia coli O1:K1 / APEC
GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|A8A2Z0|UPP_ECOHS Uracil phosphoribosyltransferase OS=Escherichia coli O9:H4 (strain
HS) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|B1XAX3|UPP_ECODH Uracil phosphoribosyltransferase OS=Escherichia coli (strain K12 /
DH10B) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|C4ZX73|UPP_ECOBW Uracil phosphoribosyltransferase OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|B7M7K2|UPP_ECO8A Uracil phosphoribosyltransferase OS=Escherichia coli O8 (strain
IAI1) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|B7MYC5|UPP_ECO81 Uracil phosphoribosyltransferase OS=Escherichia coli O81 (strain
ED1a) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
>sp|B7NQN7|UPP_ECO7I Uracil phosphoribosyltransferase OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=upp PE=3 SV=1
Length = 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 16 APQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGT 61
AP+G+ + K+ P +++ T+ ID GLNE +IPG+G+ GD+ FGT
Sbjct: 162 APEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,232,090
Number of Sequences: 539616
Number of extensions: 1053382
Number of successful extensions: 2355
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1832
Number of HSP's gapped (non-prelim): 523
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)