BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035087
(73 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NLY8|HA22K_ARATH HVA22-like protein k OS=Arabidopsis thaliana GN=HVA22K PE=2 SV=1
Length = 200
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 7/71 (9%)
Query: 9 SQVGLRLLFCPLGSNIILRTACCSVVVALPVYSTFKAIERKDEDEQQKWLI-------FS 61
+VGLR+LF PL SNI+LRTACCS+ + LPVYSTFKAIE DE+EQQK LI FS
Sbjct: 20 GEVGLRVLFSPLSSNIVLRTACCSIGIGLPVYSTFKAIESGDENEQQKMLIYWAAYGSFS 79
Query: 62 IAEVFADKFLT 72
+ EVF DK ++
Sbjct: 80 LVEVFTDKIIS 90
>sp|B2RZ37|REEP5_RAT Receptor expression-enhancing protein 5 OS=Rattus norvegicus
GN=Reep5 PE=1 SV=1
Length = 189
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 11 VGLRLLFCPLGSNIILRTACCSVVVALPVYSTFKAIERKDEDEQQKWL-------IFSIA 63
+GL L+ G L C + P Y + KAIE ++D+ +WL +FSIA
Sbjct: 42 IGLVALYLVFGYGASL--LCNLIGFGYPAYISMKAIESPNKDDDTQWLTYWVVYGVFSIA 99
Query: 64 EVFADKFLT 72
E F+D FL+
Sbjct: 100 EFFSDLFLS 108
>sp|Q60870|REEP5_MOUSE Receptor expression-enhancing protein 5 OS=Mus musculus GN=Reep5
PE=1 SV=1
Length = 185
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 11 VGLRLLFCPLGSNIILRTACCSVVVALPVYSTFKAIERKDEDEQQKWL-------IFSIA 63
+GL L+ G L C + P Y + KAIE ++D+ +WL +FSIA
Sbjct: 38 IGLVALYLVFGYGASL--LCNLIGFGYPAYISMKAIESPNKDDDTQWLTYWVVYGVFSIA 95
Query: 64 EVFADKFLT 72
E F+D FL+
Sbjct: 96 EFFSDLFLS 104
>sp|Q00765|REEP5_HUMAN Receptor expression-enhancing protein 5 OS=Homo sapiens GN=REEP5
PE=1 SV=3
Length = 189
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 11 VGLRLLFCPLGSNIILRTACCSVVVALPVYSTFKAIERKDEDEQQKWL-------IFSIA 63
+GL L+ G L C + P Y + KAIE ++++ +WL +FSIA
Sbjct: 42 IGLVALYLVFGYGASL--LCNLIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIA 99
Query: 64 EVFADKFLT 72
E F+D FL+
Sbjct: 100 EFFSDIFLS 108
>sp|Q5RE33|REEP5_PONAB Receptor expression-enhancing protein 5 OS=Pongo abelii GN=REEP5
PE=2 SV=1
Length = 189
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 11 VGLRLLFCPLGSNIILRTACCSVVVALPVYSTFKAIERKDEDEQQKWL-------IFSIA 63
+GL L+ G L C + P Y + KAIE ++++ +WL +FSIA
Sbjct: 42 IGLVALYLVFGYGASL--LCNLIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIA 99
Query: 64 EVFADKFLT 72
E F+D FL+
Sbjct: 100 EFFSDIFLS 108
>sp|Q29RM3|REEP5_BOVIN Receptor expression-enhancing protein 5 OS=Bos taurus GN=REEP5 PE=2
SV=1
Length = 189
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 11 VGLRLLFCPLGSNIILRTACCSVVVALPVYSTFKAIERKDEDEQQKWL-------IFSIA 63
+GL L+ G L C + P Y + KAIE ++++ +WL +FSI
Sbjct: 42 IGLLALYLVFGYGASL--LCNLIGFGYPAYVSIKAIESPNKEDDTQWLTYWVVYGVFSIV 99
Query: 64 EVFADKFLT 72
E F+D FL+
Sbjct: 100 EFFSDLFLS 108
>sp|Q9H902|REEP1_HUMAN Receptor expression-enhancing protein 1 OS=Homo sapiens GN=REEP1
PE=1 SV=1
Length = 201
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 22 SNIILRTACCSVVVALPVYSTFKAIERKDEDEQQKWL-------IFSIAEVFADKFL 71
S II R P Y ++KA++ KD E KW+ +F+ AE F D FL
Sbjct: 3 SWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFL 59
>sp|Q8BGH4|REEP1_MOUSE Receptor expression-enhancing protein 1 OS=Mus musculus GN=Reep1
PE=1 SV=1
Length = 201
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 22 SNIILRTACCSVVVALPVYSTFKAIERKDEDEQQKWL-------IFSIAEVFADKFL 71
S II R P Y ++KA++ KD E KW+ +F+ AE F D FL
Sbjct: 3 SWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFL 59
>sp|Q32LG5|REEP6_BOVIN Receptor expression-enhancing protein 6 OS=Bos taurus GN=REEP6 PE=2
SV=1
Length = 185
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Query: 30 CCSVVVALPVYSTFKAIERKDEDEQQKWL-------IFSIAEVFADKFLT 72
C + A P Y++ KAIE +++ WL +F +AE F+D L+
Sbjct: 58 CSLIGFAYPAYASIKAIESPSKEDDTVWLTYWVVYGLFGLAEFFSDLLLS 107
>sp|Q4KMI4|REEP2_DANRE Receptor expression-enhancing protein 2 OS=Danio rerio GN=reep2
PE=2 SV=1
Length = 268
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 22 SNIILRTACCSVVVALPVYSTFKAIERKDEDEQQKWL-------IFSIAEVFADKFLT 72
S II R + P YS++KA++ K+ E KW+ +F+ AE D L+
Sbjct: 3 SWIISRMVVLAFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFALFTTAETITDMLLS 60
>sp|Q4QQW1|REEP4_RAT Receptor expression-enhancing protein 4 OS=Rattus norvegicus
GN=Reep4 PE=2 SV=1
Length = 257
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 12/54 (22%)
Query: 31 CSVVVAL-----PVYSTFKAIERKDEDEQQKWL-------IFSIAEVFADKFLT 72
C +VV + P Y+++KA++ K+ E +W+ IF AE F D F++
Sbjct: 7 CRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFIS 60
>sp|Q8K072|REEP4_MOUSE Receptor expression-enhancing protein 4 OS=Mus musculus GN=Reep4
PE=2 SV=1
Length = 257
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 12/54 (22%)
Query: 31 CSVVVAL-----PVYSTFKAIERKDEDEQQKWL-------IFSIAEVFADKFLT 72
C +VV + P Y+++KA++ K+ E +W+ IF AE F D F++
Sbjct: 7 CRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFIS 60
>sp|Q96HR9|REEP6_HUMAN Receptor expression-enhancing protein 6 OS=Homo sapiens GN=REEP6
PE=1 SV=1
Length = 184
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 30 CCSVVVALPVYSTFKAIERKDEDEQQKWL-------IFSIAEVFADKFLT 72
C + P Y++ KAIE +D+ WL +F +AE F+D L+
Sbjct: 58 CNLIGFVYPAYASIKAIESPSKDDDTVWLTYWVVYALFGLAEFFSDLLLS 107
>sp|Q8VCD6|REEP2_MOUSE Receptor expression-enhancing protein 2 OS=Mus musculus GN=Reep2
PE=2 SV=2
Length = 254
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Query: 38 PVYSTFKAIERKDEDEQQKWLI-------FSIAEVFADKFLT 72
P YS++KA++ K+ E KW++ F+ AE D L+
Sbjct: 19 PAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIILS 60
>sp|Q9BRK0|REEP2_HUMAN Receptor expression-enhancing protein 2 OS=Homo sapiens GN=REEP2
PE=2 SV=2
Length = 252
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Query: 38 PVYSTFKAIERKDEDEQQKWLI-------FSIAEVFADKFLT 72
P YS++KA++ K+ E KW++ F+ AE D L+
Sbjct: 19 PAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLS 60
>sp|Q2KI30|REEP2_BOVIN Receptor expression-enhancing protein 2 OS=Bos taurus GN=REEP2
PE=2 SV=1
Length = 254
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Query: 38 PVYSTFKAIERKDEDEQQKWLI-------FSIAEVFADKFLT 72
P YS++KA++ K+ E KW++ F+ AE D L+
Sbjct: 19 PAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLS 60
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.333 0.144 0.469
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,881,367
Number of Sequences: 539616
Number of extensions: 752459
Number of successful extensions: 2546
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2535
Number of HSP's gapped (non-prelim): 18
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 55 (25.8 bits)