BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035089
(73 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359477919|ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
Length = 1139
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 52/62 (83%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
AALPF SKPKDI RK P ENRRAVVMEP ERKVHALVQHLQ+IRN+KMKK++ K+ K
Sbjct: 1039 AALPFASKPKDILKRKKPLLENRRAVVMEPHERKVHALVQHLQMIRNEKMKKRKLKETEK 1098
Query: 62 KK 63
+K
Sbjct: 1099 RK 1100
>gi|298205174|emb|CBI17233.3| unnamed protein product [Vitis vinifera]
Length = 1305
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 52/62 (83%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
AALPF SKPKDI RK P ENRRAVVMEP ERKVHALVQHLQ+IRN+KMKK++ K+ K
Sbjct: 1205 AALPFASKPKDILKRKKPLLENRRAVVMEPHERKVHALVQHLQMIRNEKMKKRKLKETEK 1264
Query: 62 KK 63
+K
Sbjct: 1265 RK 1266
>gi|147781739|emb|CAN69949.1| hypothetical protein VITISV_005397 [Vitis vinifera]
Length = 325
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 52/62 (83%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
AALPF SKPKDI RK P ENRRAVVMEP ERKVHALVQHLQ+IRN+KMKK++ K+ K
Sbjct: 225 AALPFASKPKDILKRKKPLLENRRAVVMEPHERKVHALVQHLQMIRNEKMKKRKLKETEK 284
Query: 62 KK 63
+K
Sbjct: 285 RK 286
>gi|147804779|emb|CAN76022.1| hypothetical protein VITISV_027071 [Vitis vinifera]
Length = 738
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 52/62 (83%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
AALPF SKPKDIP RK P EN+RAVVMEP +RKVHALV+HLQ+IRN+K+KK++ K K
Sbjct: 450 AALPFASKPKDIPKRKKPLLENQRAVVMEPHKRKVHALVRHLQMIRNEKIKKRKLKATEK 509
Query: 62 KK 63
+K
Sbjct: 510 RK 511
>gi|356541129|ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
Length = 1176
Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRA--VVMEPQERKVHALVQHLQLIRNKKMKKQQFKKV 59
A+LPF SKPKDI RK P E RRA VVMEP+ERKVH LVQHLQLI +KMKK++ K+
Sbjct: 1073 ASLPFASKPKDISKRKKPLLEERRARGVVMEPRERKVHTLVQHLQLIDREKMKKRKLKEE 1132
Query: 60 PKKK 63
K+K
Sbjct: 1133 NKRK 1136
>gi|356544500|ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
Length = 1181
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRA--VVMEPQERKVHALVQHLQLIRNKKMKKQQFKKV 59
A+LPF SKPKDI R P E RR VVMEP+ERKVHALVQHLQLI ++K+KK++ K+
Sbjct: 1078 ASLPFASKPKDISKRNKPLLEERRGRGVVMEPRERKVHALVQHLQLINSEKVKKRKLKEE 1137
Query: 60 PKKK 63
K+K
Sbjct: 1138 NKRK 1141
>gi|224133372|ref|XP_002328026.1| predicted protein [Populus trichocarpa]
gi|222837435|gb|EEE75814.1| predicted protein [Populus trichocarpa]
Length = 1181
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKK 58
A LPFESKPKDIP + E RRAVVMEP ERKVHALVQ L+LI N KM+K++ KK
Sbjct: 1080 ATLPFESKPKDIPKGRATL-ERRRAVVMEPDERKVHALVQQLRLITNDKMRKRKLKK 1135
>gi|255552533|ref|XP_002517310.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
gi|223543573|gb|EEF45103.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
Length = 284
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
AALPF SKPKDIP +K EN+RAVVMEP+ER++ L+QHLQ IR +KMKK++ K+ K
Sbjct: 183 AALPFASKPKDIPSQKRARLENKRAVVMEPRERQLSKLIQHLQRIRVEKMKKRKLKEEQK 242
Query: 62 KK 63
+K
Sbjct: 243 RK 244
>gi|449444194|ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis sativus]
Length = 1198
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIR 47
AALPF+SKPK+ P ++ P E RRAVVMEP++RKVHALVQ LQL+R
Sbjct: 1098 AALPFKSKPKNTPGQQRPLLEKRRAVVMEPRDRKVHALVQQLQLMR 1143
>gi|357473083|ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
gi|355507881|gb|AES89023.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
Length = 1175
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 2 AALPFESKPKDIPIRK-LPFPENR-RAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKV 59
A LPFESKPK P RK L F + R + VV+EP+ERK+HALVQHLQL++ +K+KK++ K+
Sbjct: 1074 ANLPFESKPKHTPKRKRLSFDDRRQKGVVVEPRERKIHALVQHLQLMKTEKIKKRKHKEG 1133
Query: 60 PKKKM 64
K+K+
Sbjct: 1134 EKRKV 1138
>gi|357473081|ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
gi|355507880|gb|AES89022.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
Length = 1200
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 2 AALPFESKPKDIPIRK-LPFPENR-RAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKV 59
A LPFESKPK P RK L F + R + VV+EP+ERK+HALVQHLQL++ +K+KK++ K+
Sbjct: 1074 ANLPFESKPKHTPKRKRLSFDDRRQKGVVVEPRERKIHALVQHLQLMKTEKIKKRKHKEG 1133
Query: 60 PKKKM 64
K+K+
Sbjct: 1134 EKRKV 1138
>gi|449502901|ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
sativus]
Length = 553
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRN 48
AALPF+SKPK+ P ++ P E RRAVVMEP++RKVHALVQ LQL+R+
Sbjct: 453 AALPFKSKPKNTPGQQRPLLEKRRAVVMEPRDRKVHALVQQLQLMRH 499
>gi|297848950|ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arabidopsis lyrata subsp.
lyrata]
gi|297338198|gb|EFH68615.1| hypothetical protein ARALYDRAFT_470695 [Arabidopsis lyrata subsp.
lyrata]
Length = 1148
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKM 51
LPF SKPKDIP RK +++RAV+MEP+ERK HA++Q QL++N KM
Sbjct: 1049 LPFTSKPKDIPKRKRASVDDKRAVIMEPKERKEHAIIQQFQLLQNYKM 1096
>gi|168041248|ref|XP_001773104.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675651|gb|EDQ62144.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1095
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 3 ALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPKK 62
ALPF+SKPKD RK P E +RAV+MEP ER V LV L LIRN+K KK++ ++ K+
Sbjct: 985 ALPFKSKPKDQKKRKNPLLETKRAVLMEPHERHVVTLVNQLSLIRNEKAKKRKVEQDKKR 1044
Query: 63 K 63
K
Sbjct: 1045 K 1045
>gi|7523707|gb|AAF63146.1|AC011001_16 Putative membrane protein [Arabidopsis thaliana]
Length = 1138
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKM 51
LPF SKPK+IP RK P E++RAV+MEP+ERK H ++Q QL+++ M
Sbjct: 1039 LPFMSKPKNIPKRKRPSLEDKRAVIMEPKERKEHTIIQQFQLLQHHTM 1086
>gi|302799593|ref|XP_002981555.1| hypothetical protein SELMODRAFT_179002 [Selaginella moellendorffii]
gi|300150721|gb|EFJ17370.1| hypothetical protein SELMODRAFT_179002 [Selaginella moellendorffii]
Length = 1113
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
AALPF+SKPK RK P E+ RAVV+EP ERKV +LVQ L I+N K KK++ ++ K
Sbjct: 1009 AALPFKSKPKLSAKRKKPLLESARAVVLEPNERKVVSLVQQLTTIQNDKAKKRKLEQRKK 1068
Query: 62 KK 63
K+
Sbjct: 1069 KE 1070
>gi|15222176|ref|NP_172157.1| BMS1 and NUC121 domain-containing protein [Arabidopsis thaliana]
gi|332189907|gb|AEE28028.1| BMS1 and NUC121 domain-containing protein [Arabidopsis thaliana]
Length = 1147
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKM 51
LPF SKPK+IP RK P E++RAV+MEP+ERK H ++Q QL+++ M
Sbjct: 1048 LPFMSKPKNIPKRKRPSLEDKRAVIMEPKERKEHTIIQQFQLLQHHTM 1095
>gi|302760207|ref|XP_002963526.1| hypothetical protein SELMODRAFT_165786 [Selaginella moellendorffii]
gi|300168794|gb|EFJ35397.1| hypothetical protein SELMODRAFT_165786 [Selaginella moellendorffii]
Length = 1120
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
AALPF+SKPK RK P E+ RAVV+EP ERKV +LVQ L I+N K KK++ ++ K
Sbjct: 1016 AALPFKSKPKLSAKRKKPVLESARAVVLEPNERKVVSLVQQLTTIQNDKAKKRKLEQRKK 1075
Query: 62 KK 63
K+
Sbjct: 1076 KE 1077
>gi|14596139|gb|AAK68797.1| Unknown protein [Arabidopsis thaliana]
gi|20148443|gb|AAM10112.1| unknown protein [Arabidopsis thaliana]
Length = 381
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKM 51
LPF SKPK+IP RK P E++RAV+MEP+ERK H ++Q QL+++ M
Sbjct: 282 LPFMSKPKNIPKRKRPSLEDKRAVIMEPKERKEHTIIQQFQLLQHHTM 329
>gi|302842371|ref|XP_002952729.1| hypothetical protein VOLCADRAFT_62777 [Volvox carteri f. nagariensis]
gi|300262073|gb|EFJ46282.1| hypothetical protein VOLCADRAFT_62777 [Volvox carteri f. nagariensis]
Length = 1162
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQ 55
AALPF++KPK P RK E +RAVV+EP E+K + L+Q L IRN+K +K++
Sbjct: 1043 AALPFKTKPKLEPARKRKTLEQKRAVVLEPGEKKAYTLLQQLNAIRNEKARKRR 1096
>gi|159480788|ref|XP_001698464.1| hypothetical protein CHLREDRAFT_113591 [Chlamydomonas reinhardtii]
gi|158282204|gb|EDP07957.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1139
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
AALPF+SKPK P RK E +RAVVM+ E+K + L+Q L IRN+K +K+ +
Sbjct: 1044 AALPFKSKPKLEPSRKRKTLEQKRAVVMDKDEKKAYTLLQQLNAIRNEKARKR------R 1097
Query: 62 KKMKKRHG 69
++ +RHG
Sbjct: 1098 EQSDRRHG 1105
>gi|328770630|gb|EGF80671.1| hypothetical protein BATDEDRAFT_29934 [Batrachochytrium dendrobatidis
JAM81]
Length = 1135
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A LPF SKPK + + P RRAVVMEP ERKV L+Q + I+N K++KQ+ K++ K
Sbjct: 1021 ARLPFASKPKLLEKQTEPSFLQRRAVVMEPHERKVATLIQAINTIKNDKLQKQKAKQMEK 1080
Query: 62 K 62
+
Sbjct: 1081 R 1081
>gi|303271067|ref|XP_003054895.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462869|gb|EEH60147.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1131
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 35/53 (66%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQ 54
A LPF+SKPK RK E RRAVVMEP+E+K+ LVQ L IRN K KQ
Sbjct: 1030 AQLPFKSKPKIEAPRKRETLEQRRAVVMEPEEKKLATLVQQLNTIRNDKAGKQ 1082
>gi|320165503|gb|EFW42402.1| ribosome biogenesis protein BMS1 [Capsaspora owczarzaki ATCC 30864]
Length = 1415
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A LP+ SKPK + R+ +RAVVMEP ERKV++L+Q +Q ++N+++KK + V +
Sbjct: 1305 AELPYASKPKLLAERQQKSYLTKRAVVMEPIERKVYSLMQQVQTVKNERIKK---RAVKQ 1361
Query: 62 KKMKKRHG 69
++ K RH
Sbjct: 1362 RESKARHA 1369
>gi|156380951|ref|XP_001632030.1| predicted protein [Nematostella vectensis]
gi|156219080|gb|EDO39967.1| predicted protein [Nematostella vectensis]
Length = 1038
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 46/61 (75%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPKKK 63
LPF+SKPKD R+ P E++RAVVMEPQE+KV++L+Q L +K++K++ K V K+K
Sbjct: 938 LPFKSKPKDAKKRQRPSLESKRAVVMEPQEKKVYSLMQQLYTANKEKLRKRKEKLVQKRK 997
Query: 64 M 64
+
Sbjct: 998 V 998
>gi|440804575|gb|ELR25452.1| Ribosome biogenesis protein [Acanthamoeba castellanii str. Neff]
Length = 1180
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMK 52
LPF SKPKD R P +R VVMEP E+KVH L+Q L ++N + K
Sbjct: 1067 LPFASKPKDSKKRSKPTLGTKRKVVMEPHEKKVHTLLQQLNTMKNDQTK 1115
>gi|424513564|emb|CCO66186.1| predicted protein [Bathycoccus prasinos]
Length = 1168
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 3 ALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPKK 62
ALPF+SKPK P RK E +RAVV + +E+K+ +VQ L IRN+KM K++ ++ ++
Sbjct: 1066 ALPFKSKPKLEPSRKRKTLEQKRAVVQDKEEKKMTTMVQQLNTIRNEKMAKRKAQQDVRR 1125
Query: 63 KMKKRHGGRES 73
+K + +++
Sbjct: 1126 AVKAKKDAKDN 1136
>gi|242041043|ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
gi|241921770|gb|EER94914.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
Length = 1184
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLI 46
LPF+SKPKD P +K ENR V+M+P E+K HA +Q L+LI
Sbjct: 1088 LPFKSKPKDTPKQKKVSVENRVPVIMQPSEKKTHAAIQQLRLI 1130
>gi|115452841|ref|NP_001050021.1| Os03g0333100 [Oryza sativa Japonica Group]
gi|113548492|dbj|BAF11935.1| Os03g0333100 [Oryza sativa Japonica Group]
Length = 1180
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 4 LPFESKPKDIP-IRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMK 52
LPF+SKPKD P RK P ENR V+M+P E+K HA +Q L+L++++K +
Sbjct: 1084 LPFKSKPKDTPKHRKTPV-ENRVPVLMQPSEKKTHAAIQQLRLLKHEKAR 1132
>gi|222624872|gb|EEE59004.1| hypothetical protein OsJ_10724 [Oryza sativa Japonica Group]
Length = 1130
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 4 LPFESKPKDIP-IRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMK 52
LPF+SKPKD P RK P ENR V+M+P E+K HA +Q L+L++++K +
Sbjct: 1034 LPFKSKPKDTPKHRKTPV-ENRVPVLMQPSEKKTHAAIQQLRLLKHEKAR 1082
>gi|218192763|gb|EEC75190.1| hypothetical protein OsI_11428 [Oryza sativa Indica Group]
Length = 1130
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 4 LPFESKPKDIP-IRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMK 52
LPF+SKPKD P RK P ENR V+M+P E+K HA +Q L+L++++K +
Sbjct: 1034 LPFKSKPKDTPKHRKTPV-ENRVPVLMQPSEKKTHAAIQQLRLLKHEKAR 1082
>gi|308810096|ref|XP_003082357.1| unnamed protein product [Ostreococcus tauri]
gi|116060825|emb|CAL57303.1| unnamed protein product [Ostreococcus tauri]
Length = 1161
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 3 ALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQ 54
ALPF+SKPK R+ E RRAVV + +E+K+ +VQ L IRN+KM+K+
Sbjct: 1046 ALPFKSKPKLEKARRHETLERRRAVVQDKEEKKLTTMVQQLNTIRNEKMEKR 1097
>gi|428174592|gb|EKX43487.1| hypothetical protein GUITHDRAFT_62130, partial [Guillardia theta
CCMP2712]
Length = 1132
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQ 55
LPF SKPK+ R+ ++RAVVMEP+E+++H L+ + IRN K KK++
Sbjct: 1039 LPFASKPKEEKQRRKKLYVHKRAVVMEPEEKRLHVLMHKINTIRNDKTKKRK 1090
>gi|307109440|gb|EFN57678.1| hypothetical protein CHLNCDRAFT_142849 [Chlorella variabilis]
Length = 955
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKK 50
AALPF++KPK RK E +RAVV+EP+ERK +L+ L IRN+K
Sbjct: 851 AALPFKTKPKVEGKRKRKTLEQKRAVVLEPEERKKVSLISQLNAIRNQK 899
>gi|384246911|gb|EIE20399.1| DUF663-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 1232
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKV 59
AALP++SKPK R+ E +RAVV+EP ER AL+ L +RN+K +K++ K+
Sbjct: 1126 AALPYKSKPKVPGARRRQTLEQKRAVVLEPAERISVALIDQLNALRNEKAEKKRAKQA 1183
>gi|255070221|ref|XP_002507192.1| predicted protein [Micromonas sp. RCC299]
gi|226522467|gb|ACO68450.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 1120
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 3 ALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPKK 62
ALPFESKPK R E +RAVV + +E+ + LVQ L IRN + K + K V K+
Sbjct: 1031 ALPFESKPKIETKRMQRTLEQKRAVVFDSEEKSLATLVQQLSTIRNDRAGKVRCKAVSKR 1090
Query: 63 K 63
+
Sbjct: 1091 E 1091
>gi|313747527|ref|NP_001186449.1| ribosome biogenesis protein BMS1 homolog [Gallus gallus]
Length = 1300
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 3 ALPFESKPKDIPIR-KLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFK 57
ALPF++KPK++ + K P + R AV+MEP E+K+ AL+ L + N K+KK + K
Sbjct: 1189 ALPFKNKPKNLEKKGKTPKDQWRPAVIMEPHEKKISALLNALSTVNNYKIKKAKVK 1244
>gi|145352670|ref|XP_001420661.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580896|gb|ABO98954.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1148
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 3 ALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQ 55
ALPF+SKPK R E RRAVV + +E K+ +VQ L IRN+K+ K++
Sbjct: 1036 ALPFKSKPKLEKARTRETLEQRRAVVQDKEENKLATMVQQLNTIRNEKLAKRE 1088
>gi|342321282|gb|EGU13216.1| GTP binding protein [Rhodotorula glutinis ATCC 204091]
Length = 1187
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 2 AALPFESKPK-DIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLI-RNKKMKKQQFKKV 59
AALPF SKPK +P + + + +RAVVMEP E+K +L+Q +Q I R+K K+++ K+
Sbjct: 1077 AALPFASKPKMQLPQKNKTYLQ-KRAVVMEPDEKKALSLLQQIQAISRDKDAKRKEAKQA 1135
Query: 60 PK 61
K
Sbjct: 1136 RK 1137
>gi|357112362|ref|XP_003557978.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Brachypodium
distachyon]
Length = 1178
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 2 AALPFESKPKDIPIRK---LPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKK 58
++LPF +KPKD P K PE +M+ ERK HA +Q L L++++K +K + K
Sbjct: 1082 SSLPFTTKPKDRPKSKKQPNSIPE-----LMDLDERKKHAAIQQLMLLKHEKTRKAKIKD 1136
Query: 59 VPKKKM 64
V KKK+
Sbjct: 1137 VQKKKI 1142
>gi|444519114|gb|ELV12588.1| Ribosome biogenesis protein BMS1 like protein [Tupaia chinensis]
Length = 995
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 3 ALPFESKPKDIPIRKLPFPENRR--AVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK I + P++RR AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 886 ALPFKNKPK-IQAKAGKIPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 937
>gi|449269321|gb|EMC80109.1| Ribosome biogenesis protein BMS1 like protein, partial [Columba
livia]
Length = 1312
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 3 ALPFESKPKDIPIR-KLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFK 57
ALPF++KPK++ + K P + R AV+ EP E+K+ AL+ L + N K+KK + K
Sbjct: 1202 ALPFKNKPKNLEKKGKTPKDQWRPAVIREPHEKKISALLSALSTVNNYKIKKAKVK 1257
>gi|164656342|ref|XP_001729299.1| hypothetical protein MGL_3766 [Malassezia globosa CBS 7966]
gi|159103189|gb|EDP42085.1| hypothetical protein MGL_3766 [Malassezia globosa CBS 7966]
Length = 1061
Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKK 58
AALPF SKP ++ P +RAVVME ER AL+Q +Q +++ K +K+ K+
Sbjct: 961 AALPFSSKPHTTRAQRKPTYLQKRAVVMEKDERDTVALLQQMQAVQHAKQQKRTQKR 1017
>gi|302689375|ref|XP_003034367.1| hypothetical protein SCHCODRAFT_106788 [Schizophyllum commune H4-8]
gi|300108062|gb|EFI99464.1| hypothetical protein SCHCODRAFT_106788, partial [Schizophyllum
commune H4-8]
Length = 1121
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A LP+ SKPK +K +RAVVMEP+E++ AL+Q ++ +R ++K+++ KK K
Sbjct: 1011 AELPYASKPKLTAPQKRQTYLQKRAVVMEPEEKRAIALLQQMRALRGDQVKRRREKKAEK 1070
Query: 62 KK 63
++
Sbjct: 1071 RE 1072
>gi|183986036|gb|AAI66492.1| Bms1 protein [Rattus norvegicus]
Length = 894
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERKV AL+ L I +KMKK
Sbjct: 787 ALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHGQKMKK 838
>gi|21410151|gb|AAH30906.1| Bms1 protein [Mus musculus]
Length = 938
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERKV AL+ L I ++KMKK
Sbjct: 831 ALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHSQKMKK 882
>gi|39930555|ref|NP_919320.1| ribosome biogenesis protein BMS1 homolog [Mus musculus]
gi|34785265|gb|AAH57054.1| BMS1 homolog, ribosome assembly protein (yeast) [Mus musculus]
gi|148667179|gb|EDK99595.1| BMS1-like, ribosome assembly protein (yeast) [Mus musculus]
Length = 1284
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERKV AL+ L I ++KMKK
Sbjct: 1177 ALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHSQKMKK 1228
>gi|449504942|ref|XP_002194810.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Taeniopygia
guttata]
Length = 1313
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 3 ALPFESKPKDIPIR-KLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFK 57
ALPF++KPK++ + K P + R AV+ EP E+K+ AL+ L + N K+KK + K
Sbjct: 1202 ALPFKNKPKNLEKKGKTPKDQWRPAVIREPHEKKISALLSALSTVNNYKIKKAKAK 1257
>gi|37359828|dbj|BAC97892.1| mKIAA0187 protein [Mus musculus]
Length = 1287
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERKV AL+ L I ++KMKK
Sbjct: 1180 ALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHSQKMKK 1231
>gi|281599335|ref|NP_001094221.1| BMS1 homolog, ribosome assembly protein [Rattus norvegicus]
Length = 1282
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERKV AL+ L I +KMKK
Sbjct: 1175 ALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHGQKMKK 1226
>gi|307109439|gb|EFN57677.1| hypothetical protein CHLNCDRAFT_142847 [Chlorella variabilis]
Length = 97
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKK 50
AALPF+ K RK E +RAVV+EP+ERK +L+ L IRN+K
Sbjct: 5 AALPFKGK------RKRKTLEQKRAVVLEPEERKKVSLISQLNAIRNQK 47
>gi|328867057|gb|EGG15440.1| BMS1-like ribosome biogenesis protein [Dictyostelium fasciculatum]
Length = 1243
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 2 AALPFESKPK--DIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQ 55
AALPF+ KPK + + + RAV+MEP E++V L+ L++I+ KK+ +Q
Sbjct: 1107 AALPFDLKPKRSHVITNEADALLSSRAVIMEPHEKRVQDLITRLEMIKQKKIHQQN 1162
>gi|402223134|gb|EJU03199.1| DUF663-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 1119
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 41/61 (67%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
AALP+ SKP+++ + P +RA+VMEP+E++ AL+Q ++ ++ + +++ K+ +
Sbjct: 1007 AALPYASKPREMKAQNRPTYLQKRAIVMEPEEKRAVALLQQIRALQKDQTARRKEKQAER 1066
Query: 62 K 62
+
Sbjct: 1067 R 1067
>gi|62531019|gb|AAH92659.1| Bms1 protein [Rattus norvegicus]
Length = 392
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERKV AL+ L I +KMKK
Sbjct: 285 ALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHGQKMKK 336
>gi|395847991|ref|XP_003796647.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Otolemur
garnettii]
Length = 1287
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK+ K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1178 ALPFKNKPKNQAKAGKVPKDRQRPAVIREPHERKILALLDALSTVHSQKMKK 1229
>gi|340382064|ref|XP_003389541.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Amphimedon
queenslandica]
Length = 1047
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFK 57
LPF+S+PK RK +RAVV+EP+E++V L+Q L I +K KK+ K
Sbjct: 946 LPFKSRPKLFAKRKKKSLAAKRAVVLEPEEKRVRTLMQQLTTIHREKAKKKLMK 999
>gi|354484279|ref|XP_003504317.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cricetulus
griseus]
gi|344252222|gb|EGW08326.1| Ribosome biogenesis protein BMS1-like [Cricetulus griseus]
Length = 1276
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERKV AL+ L I + KMKK
Sbjct: 1169 ALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHSHKMKK 1220
>gi|392566494|gb|EIW59670.1| DUF663-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 1152
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKM 51
AALP+ SKPK + P +RAVV+EP+E+K AL+Q ++ +R ++
Sbjct: 1041 AALPYASKPKVMKAAHRPTYMQKRAVVLEPEEKKAMALLQQVRALRKDQV 1090
>gi|219109997|ref|XP_002176751.1| ribosome biogenesis protein BMS1 [Phaeodactylum tricornutum CCAP
1055/1]
gi|217411286|gb|EEC51214.1| ribosome biogenesis protein BMS1 [Phaeodactylum tricornutum CCAP
1055/1]
Length = 1096
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 3 ALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKM 51
ALP+++KPK++ RK + RAVVME ERK +Q L IR +K+
Sbjct: 993 ALPYKNKPKNLEKRKKKGYVSNRAVVMEADERKKTTFIQALNTIRKEKV 1041
>gi|326435702|gb|EGD81272.1| hypothetical protein PTSG_11309 [Salpingoeca sp. ATCC 50818]
Length = 1064
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A LPF++KPK R+ E +RAVV+ +ERK +L+Q L IRN K++ ++ K
Sbjct: 948 ANLPFKTKPKLATKRRHATYETKRAVVLSEKERKRISLLQELATIRNDMNAKKKARRAQK 1007
Query: 62 KKMKKR 67
++ K+
Sbjct: 1008 REEAKK 1013
>gi|449548761|gb|EMD39727.1| hypothetical protein CERSUDRAFT_150396 [Ceriporiopsis subvermispora
B]
Length = 930
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKK 58
AALP+ SKPK + + +RAVV+EP+E+K AL+Q ++ +R ++ +++ K+
Sbjct: 819 AALPYASKPKIMKAQSRQTYMQKRAVVLEPEEKKAMALLQQMRALRKDQVARRKGKQ 875
>gi|440896335|gb|ELR48289.1| Ribosome biogenesis protein BMS1-like protein, partial [Bos
grunniens mutus]
Length = 886
Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF+SKPK K P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 777 ALPFKSKPKTQAKAGKTPKDRVRPAVIREPHERKILALLDALSTVHSEKMKK 828
>gi|73997955|ref|XP_534956.2| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform 1 [Canis
lupus familiaris]
Length = 1287
Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 3 ALPFESKPKDIPIRKLPFPENRR--AVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK + P++RR AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1178 ALPFKNKPK-TQAKAGKIPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1229
>gi|410975653|ref|XP_003994245.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Felis catus]
Length = 1284
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1175 ALPFKNKPKTQAKAGKIPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1226
>gi|409042076|gb|EKM51560.1| hypothetical protein PHACADRAFT_150036 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1164
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 3 ALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIR-----NKKMKKQQFK 57
ALP+ SKPK + + P +RAVVMEP+E+K AL+Q ++ +R +K K+ + K
Sbjct: 1055 ALPYASKPKLMKPQGKPTYMQKRAVVMEPEEKKAIALLQQIRALRKDQAARRKEKQNERK 1114
Query: 58 KVPKKKM 64
+V +KK+
Sbjct: 1115 EVHRKKV 1121
>gi|383423241|gb|AFH34834.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
Length = 1283
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 3 ALPFESKPKDIPIRKLPFPENRR--AVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK + P++RR AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1174 ALPFKNKPK-TQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1225
>gi|426255578|ref|XP_004021425.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Ovis aries]
Length = 1283
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF+SKPK K P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1174 ALPFKSKPKTQAKAGKTPKDRVRPAVIREPHERKILALLDALSTVHSEKMKK 1225
>gi|145530734|ref|XP_001451139.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418783|emb|CAK83742.1| unnamed protein product [Paramecium tetraurelia]
Length = 913
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 12/72 (16%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVV---------MEPQERKVHALVQHLQLIRNKKMKKQ 54
LPFESK K ++ L F E R V M +E++V++L+Q L I+N+K KK+
Sbjct: 807 LPFESKEK---VKSLSFRERLRQQVEKNLPVKSNMTDKEKEVYSLIQRLNTIKNEKEKKR 863
Query: 55 QFKKVPKKKMKK 66
+ K + K+K+KK
Sbjct: 864 EQKDIQKQKVKK 875
>gi|329663769|ref|NP_001193076.1| ribosome biogenesis protein BMS1 homolog [Bos taurus]
gi|296472215|tpg|DAA14330.1| TPA: CG7728-like [Bos taurus]
Length = 1284
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF+SKPK K P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1175 ALPFKSKPKTQAKAGKTPKDRVRPAVIREPHERKILALLDALSTVHSEKMKK 1226
>gi|380818408|gb|AFE81077.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
gi|380818410|gb|AFE81078.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
gi|380818412|gb|AFE81079.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
gi|380818416|gb|AFE81081.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
Length = 1283
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 3 ALPFESKPKDIPIRKLPFPENRR--AVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK + P++RR AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1174 ALPFKNKPK-TQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1225
>gi|410340949|gb|JAA39421.1| BMS1 homolog, ribosome assembly protein [Pan troglodytes]
Length = 1282
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1173 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1224
>gi|197101473|ref|NP_001127670.1| ribosome biogenesis protein BMS1 homolog [Pongo abelii]
gi|55733603|emb|CAH93478.1| hypothetical protein [Pongo abelii]
Length = 1283
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 3 ALPFESKPKDIPIRKLPFPENRR--AVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK + P++RR AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1174 ALPFKNKPK-TQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1225
>gi|114630270|ref|XP_001155329.1| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform 4 [Pan
troglodytes]
Length = 1282
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1173 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1224
>gi|403276777|ref|XP_003930062.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Saimiri
boliviensis boliviensis]
Length = 1282
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1173 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1224
>gi|327278786|ref|XP_003224141.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Anolis
carolinensis]
Length = 1292
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 3 ALPFESKPK-DIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFK 57
ALPF+SKPK RK+ + R A++ EP E+K+ AL+ L + N K+KK + K
Sbjct: 1183 ALPFKSKPKMQEGKRKVTRDKWRPAIIREPHEKKIAALLSALSTVHNDKLKKAKLK 1238
>gi|223999435|ref|XP_002289390.1| Conserved Hypothetical Protein [Thalassiosira pseudonana CCMP1335]
gi|220974598|gb|EED92927.1| Conserved Hypothetical Protein [Thalassiosira pseudonana CCMP1335]
Length = 1120
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
+ALPF SK KD RK ++RAV+ME E+K + +Q + IR K K++ K +
Sbjct: 1016 SALPFASKHKDDTKRKKKSYASKRAVMMEADEKKKYTFIQAVNTIRADKRSKRKEKNAER 1075
Query: 62 KKMK 65
+ K
Sbjct: 1076 RLAK 1079
>gi|332244090|ref|XP_003271205.1| PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1
homolog [Nomascus leucogenys]
Length = 1282
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1173 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1224
>gi|194042650|ref|XP_001928816.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Sus scrofa]
Length = 1282
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF+SKPK K P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1173 ALPFKSKPKTQAKAGKTPKDRLRPAVIREPHERKILALLDALSTVHSQKMKK 1224
>gi|426195607|gb|EKV45536.1| hypothetical protein AGABI2DRAFT_223611 [Agaricus bisporus var.
bisporus H97]
Length = 889
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKM 51
+ALP+ SKPK + ++ +RAVVMEP+ER+ AL+Q ++ +R K+
Sbjct: 777 SALPYASKPKLMKKQRSQTYLQKRAVVMEPEEREAVALLQQMRALRKDKV 826
>gi|194206075|ref|XP_001489995.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Equus caballus]
Length = 1599
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AVV EP ERK+ AL+ L + ++KMKK
Sbjct: 1170 ALPFKNKPKTQAKAGKVPKDRLRPAVVREPHERKILALLDALSTVHSQKMKK 1221
>gi|397491654|ref|XP_003816764.1| PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1
homolog [Pan paniscus]
Length = 1280
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1171 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1222
>gi|40788900|dbj|BAA11504.2| KIAA0187 [Homo sapiens]
Length = 1285
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1176 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1227
>gi|224589071|ref|NP_055568.3| ribosome biogenesis protein BMS1 homolog [Homo sapiens]
gi|27151474|sp|Q14692.1|BMS1_HUMAN RecName: Full=Ribosome biogenesis protein BMS1 homolog; AltName:
Full=Ribosome assembly protein BMS1 homolog
gi|119606977|gb|EAW86571.1| BMS1-like, ribosome assembly protein (yeast), isoform CRA_a [Homo
sapiens]
gi|152013040|gb|AAI50253.1| BMS1 homolog, ribosome assembly protein (yeast) [Homo sapiens]
gi|168278541|dbj|BAG11150.1| ribosome biogenesis protein BMS1 homolog [synthetic construct]
Length = 1282
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1173 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1224
>gi|27696627|gb|AAH43345.1| BMS1 homolog, ribosome assembly protein (yeast) [Homo sapiens]
Length = 1282
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1173 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1224
>gi|297300829|ref|XP_001097761.2| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
[Macaca mulatta]
Length = 497
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 388 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 439
>gi|426364541|ref|XP_004049361.1| PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1
homolog [Gorilla gorilla gorilla]
Length = 1145
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1036 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 1087
>gi|343962165|dbj|BAK62670.1| ribosome biogenesis protein BMS1 homolog [Pan troglodytes]
Length = 428
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 319 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 370
>gi|297698653|ref|XP_002826431.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Pongo abelii]
Length = 529
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 420 ALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKK 471
>gi|409078701|gb|EKM79063.1| hypothetical protein AGABI1DRAFT_73822 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1094
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKM 51
+ALP+ SKPK + ++ +RAVVMEP+ER+ AL+Q ++ +R K+
Sbjct: 982 SALPYASKPKLMKKQRSQTYLQKRAVVMEPEEREAVALLQQMRALRKDKV 1031
>gi|335773252|gb|AEH58330.1| ribosome biogenesis protein BMS1-like protein, partial [Equus
caballus]
Length = 515
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AVV EP ERK+ AL+ L + ++KMKK
Sbjct: 406 ALPFKNKPKTQAKAGKVPKDRLRPAVVREPHERKILALLDALSTVHSQKMKK 457
>gi|334313904|ref|XP_003339962.1| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform 2
[Monodelphis domestica]
Length = 1303
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKDIP-IRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF+SKPK+ K+P R AV+ EP E+K+ +L+ L + + KMKK
Sbjct: 1191 ALPFKSKPKNQEKAAKIPRDRVRAAVIREPHEKKIFSLLTALGTVHSYKMKK 1242
>gi|126272884|ref|XP_001369831.1| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform 1
[Monodelphis domestica]
Length = 1301
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKDIP-IRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF+SKPK+ K+P R AV+ EP E+K+ +L+ L + + KMKK
Sbjct: 1189 ALPFKSKPKNQEKAAKIPRDRVRAAVIREPHEKKIFSLLTALGTVHSYKMKK 1240
>gi|281338540|gb|EFB14124.1| hypothetical protein PANDA_005543 [Ailuropoda melanoleuca]
Length = 1276
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1171 ALPFKNKPKTQAKAGKMPKDRLRPAVIREPHERKILALLDALSTVHSQKMKK 1222
>gi|301763821|ref|XP_002917327.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Ailuropoda
melanoleuca]
Length = 1278
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1169 ALPFKNKPKTQAKAGKMPKDRLRPAVIREPHERKILALLDALSTVHSQKMKK 1220
>gi|351704261|gb|EHB07180.1| Ribosome biogenesis protein BMS1-like protein [Heterocephalus glaber]
Length = 1206
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPK-DIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P + R AV+ EP ERK+ AL+ L + ++K+KK
Sbjct: 1099 ALPFKNKPKLQAKAGKVPRDKWRPAVIREPHERKILALLDALSTVNSQKLKK 1150
>gi|401882956|gb|EJT47195.1| hypothetical protein A1Q1_04053 [Trichosporon asahii var. asahii CBS
2479]
Length = 1131
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A LP+ SKPK + +K P RAVVM +E+K AL+Q +Q ++ K+ +++ +
Sbjct: 1020 ADLPYASKPKVMNAQKKPTYLQSRAVVMGDEEKKAVALLQQIQSLKKDKVARRK-----E 1074
Query: 62 KKMKKRHGGRE 72
K+ ++R G RE
Sbjct: 1075 KQEERRKGHRE 1085
>gi|291412557|ref|XP_002722545.1| PREDICTED: BMS1-like, ribosome assembly protein [Oryctolagus
cuniculus]
Length = 1275
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + ++KM+K
Sbjct: 1168 ALPFKNKPKTQAKAGKVPKDRVRPAVIREPHERKIRALLDALSTVHSQKMRK 1219
>gi|406700395|gb|EKD03566.1| hypothetical protein A1Q2_02149 [Trichosporon asahii var. asahii CBS
8904]
Length = 1130
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A LP+ SKPK + +K P RAVVM +E+K AL+Q +Q ++ K+ +++ +
Sbjct: 1019 ADLPYASKPKVMNAQKKPTYLQSRAVVMGDEEKKAVALLQQIQSLKKDKVARRK-----E 1073
Query: 62 KKMKKRHGGRE 72
K+ ++R G RE
Sbjct: 1074 KQEERRKGHRE 1084
>gi|395328672|gb|EJF61063.1| hypothetical protein DICSQDRAFT_106731 [Dichomitus squalens LYAD-421
SS1]
Length = 1168
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A+LP+ SKPK + + +RAVVMEP+E+K AL+Q ++ +R ++ +++ K+ +
Sbjct: 1057 ASLPYASKPKLMRAQHRATYMQKRAVVMEPEEKKAMALLQQVRALRKDQVARRREKQEER 1116
Query: 62 K 62
K
Sbjct: 1117 K 1117
>gi|145498088|ref|XP_001435032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402161|emb|CAK67635.1| unnamed protein product [Paramecium tetraurelia]
Length = 913
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 12/72 (16%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVV---------MEPQERKVHALVQHLQLIRNKKMKKQ 54
LPFESK K ++ L F E R V M +E++V++L+Q L I+N+K KK+
Sbjct: 808 LPFESKEK---VKSLSFRERLRQQVEKNLPVKSNMTDKEKEVYSLIQRLNTIKNEKEKKR 864
Query: 55 QFKKVPKKKMKK 66
+ K + K+K+K+
Sbjct: 865 EQKDIQKQKVKE 876
>gi|299743930|ref|XP_002910724.1| GTP binding protein [Coprinopsis cinerea okayama7#130]
gi|298405884|gb|EFI27230.1| GTP binding protein [Coprinopsis cinerea okayama7#130]
Length = 1163
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIR 47
AALP+ SKPK + + +RAVVMEP+E+K AL+Q ++ +R
Sbjct: 1053 AALPYASKPKLMKPQSNQTYMQKRAVVMEPEEKKAVALLQQIRALR 1098
>gi|403419427|emb|CCM06127.1| predicted protein [Fibroporia radiculosa]
Length = 1112
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
AALP+ SKPK + + +RAVVMEP+E+K AL+Q ++ +R ++ +
Sbjct: 1000 AALPYASKPKLVKQQHRRTYLQKRAVVMEPEEKKAIALLQQIRALRKDQVAR 1051
>gi|60552298|gb|AAH91626.1| Unknown (protein for IMAGE:7198352), partial [Xenopus laevis]
Length = 1228
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERKV AL+ L I ++K KK
Sbjct: 1177 ALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHSQKKKK 1228
>gi|355672808|gb|AER95115.1| BMS1-like protein, ribosome assembly protein [Mustela putorius furo]
Length = 1204
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K P R AV+ EP ERK+ AL+ L + ++KMKK
Sbjct: 1123 ALPFKNKPKTQAKAGKTPKDRLRPAVIREPHERKILALLDALSTVHSQKMKK 1174
>gi|343426053|emb|CBQ69585.1| probable BMS1-GTP-binding protein, required for distinct steps of 40S
ribosome biogenesis [Sporisorium reilianum SRZ2]
Length = 1145
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A LPF+SKPK + + +RAVV+E E+K AL+Q ++ ++ +K +K++ K K
Sbjct: 1042 AELPFKSKPKQMARARATSYLAKRAVVLEGDEKKALALLQQMKTVQREKDEKRKRKNTEK 1101
Query: 62 KKMK 65
K K
Sbjct: 1102 KGEK 1105
>gi|378731920|gb|EHY58379.1| hypothetical protein HMPREF1120_06390 [Exophiala dermatitidis
NIH/UT8656]
Length = 1182
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
A LPF+S+ RK P +RAVV+ +E+K L+Q LQ +RN+K +K
Sbjct: 1072 AELPFKSQITQQKARKAPTYLQKRAVVLGGEEKKARDLMQKLQTMRNEKAEK 1123
>gi|388579243|gb|EIM19569.1| DUF663-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 1108
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A LP+ SKPK +K +RAVVMEP+++K A++Q ++ I K K+ KK K
Sbjct: 1000 AELPYASKPKLTKPQKNETYMQKRAVVMEPEQKKAIAIIQQMRAIDKDKGAKRAAKKDEK 1059
Query: 62 KKMKKRH 68
++ ++++
Sbjct: 1060 REERQKN 1066
>gi|389744651|gb|EIM85833.1| DUF663-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1164
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A+LP+ SKPK + + +RAVV+EP+E+K A++Q ++ IR ++ +++ K+ +
Sbjct: 1054 ASLPYASKPKLMKPQSHQTYLQKRAVVLEPEEKKALAVMQQIRAIRKDQVIRRREKQDAR 1113
Query: 62 KKMKK 66
K +K+
Sbjct: 1114 KDVKR 1118
>gi|344293842|ref|XP_003418629.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Loxodonta
africana]
Length = 1282
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 3 ALPFESKPKDIPIRKLPFPENRR--AVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK + P++RR V+ EP ERKV AL+ L + + KMKK
Sbjct: 1178 ALPFKNKPK-TQAKAGKVPKDRRRPVVIREPHERKVLALLDALSTVHSHKMKK 1229
>gi|395501611|ref|XP_003755185.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Sarcophilus
harrisii]
Length = 1377
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKDIP-IRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF+SKPK+ K+P R AV+ EP E+K+ +L+ L + + KMKK
Sbjct: 1264 ALPFKSKPKNQEKAAKVPRDRVRPAVIREPHEKKIFSLLAALGTVHSYKMKK 1315
>gi|392591906|gb|EIW81233.1| DUF663-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 1132
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKM-----KKQQF 56
A LP+ SKPK + ++ +RAV+MEP+E+K AL+Q ++ +R ++ K+++
Sbjct: 1022 ADLPYASKPKLMKPQQRQTYMQKRAVIMEPEEKKAVALLQQVRALRKDQVARRREKQKER 1081
Query: 57 KKVPKKKMKK 66
K+V +KK++K
Sbjct: 1082 KEVHRKKIEK 1091
>gi|302191608|ref|NP_001104620.2| ribosome biogenesis protein BMS1 homolog [Danio rerio]
Length = 1221
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKDIPIR-KLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF+SKPK + + K P R AV+ EP E+KV AL+ L + + K KK
Sbjct: 1113 ALPFKSKPKYMQSKGKTPRDLQRPAVIREPHEKKVAALLDALTTVYSYKTKK 1164
>gi|336369762|gb|EGN98103.1| hypothetical protein SERLA73DRAFT_169159 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1129
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
Query: 2 AALPFESKPKDI-PIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVP 60
AALP+ SKPK + P R+ + + +RAV+ EP+E+K AL+Q ++ +R K Q +
Sbjct: 1019 AALPYASKPKIMKPQRRQTYLQ-KRAVIREPEEKKAVALLQQIRALR-----KDQVARRK 1072
Query: 61 KKKMKKRHG 69
+K+ ++R G
Sbjct: 1073 EKQHERREG 1081
>gi|431914597|gb|ELK15785.1| Ribosome biogenesis protein BMS1 like protein [Pteropus alecto]
Length = 1236
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K+P R AV+ EP ERK+ AL+ L + +K+KK
Sbjct: 1127 ALPFKNKPKTQAKAGKMPKDRLRPAVIREPHERKILALLDALSTVHCQKLKK 1178
>gi|326500420|dbj|BAK06299.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 167
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPKKK 63
LPF+SKPKD P K + +M E+K+H +Q L L++++K +K++ K+ +KK
Sbjct: 71 LPFKSKPKDRPKGKKGSAVDMIPEIMNIGEKKIHGALQQLHLLKHEKTRKEKIKRGLQKK 130
>gi|260837443|ref|XP_002613713.1| hypothetical protein BRAFLDRAFT_286746 [Branchiostoma floridae]
gi|229299102|gb|EEN69722.1| hypothetical protein BRAFLDRAFT_286746 [Branchiostoma floridae]
Length = 1243
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPKKK 63
LPF++KPK P + + +R AV+MEP ERKV AL++ L+ + K ++ K+K
Sbjct: 1133 LPFKTKPKQNPAKPVKVM-DRPAVIMEPHERKVAALMKALRSVHKDKKSQE------KQK 1185
Query: 64 MKKRH 68
+K+R+
Sbjct: 1186 VKERY 1190
>gi|432925926|ref|XP_004080782.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Oryzias latipes]
Length = 1187
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKDIPIR-KLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF+SKPK + K P R V+ EP ERKV AL+ L+ + N K KK
Sbjct: 1079 ALPFKSKPKQQQAKGKTPRDLQRPKVIREPHERKVAALLHALRTVHNHKRKK 1130
>gi|157137085|ref|XP_001663880.1| ribosome biogenesis protein [Aedes aegypti]
gi|108880923|gb|EAT45148.1| AAEL003555-PA [Aedes aegypti]
Length = 1160
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 3 ALPFESKPKDIPIR-KLPFPENRRAVVMEPQERKVHALVQHLQL-IRNKKMKKQQFKKVP 60
ALP++ KPK PI K P R AVV P E+KV+ +++ ++ NK+ K++Q K
Sbjct: 1052 ALPYKDKPKLGPINPKKPLDSGRVAVVHSPHEQKVNKMMKMIKTNFENKEEKRKQLNKQK 1111
Query: 61 KKKMKKR 67
+K KK+
Sbjct: 1112 SEKYKKQ 1118
>gi|348560706|ref|XP_003466154.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cavia porcellus]
Length = 1277
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 3 ALPFESKPKDIPIRKLPFPENRR--AVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK + + P++R AV+ EP ERK+ AL+ L + ++K+KK
Sbjct: 1170 ALPFKNKPK-LQAKAGQVPKDRLRPAVIREPHERKILALLDALSTVNSQKVKK 1221
>gi|330842852|ref|XP_003293383.1| hypothetical protein DICPUDRAFT_158216 [Dictyostelium purpureum]
gi|325076298|gb|EGC30096.1| hypothetical protein DICPUDRAFT_158216 [Dictyostelium purpureum]
Length = 1183
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 2 AALPFESKPKDIPIR-KLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQ 55
+ LPFE+KPK I+ + + R ++EP E++V L++ LQ I++KK++K+Q
Sbjct: 1081 SQLPFEAKPKQRVIKNQDDILLSSRVNIVEPHEQQVADLMKRLQTIKDKKIEKEQ 1135
>gi|392579654|gb|EIW72781.1| hypothetical protein TREMEDRAFT_25428 [Tremella mesenterica DSM 1558]
Length = 1114
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 40/62 (64%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
A+LP+ +K + +K +RAVV++P+E+K AL+Q +Q +R K+ +++ K+ +
Sbjct: 1006 ASLPYATKTAQLLKQKKKTYLQKRAVVLQPEEKKAVALLQQIQALRKDKVARRRAKQTER 1065
Query: 62 KK 63
++
Sbjct: 1066 RQ 1067
>gi|308275365|ref|NP_001184133.1| BMS1 homolog, ribosome assembly protein [Xenopus (Silurana)
tropicalis]
Length = 1264
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKDIPIR-KLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF+SKPK + + K+ + R AV+ EP ERK+ AL+ L + N K K
Sbjct: 1156 ALPFKSKPKFMEKKGKVTRDQVRPAVIREPHERKISALLNALGTVNNYKKAK 1207
>gi|348533229|ref|XP_003454108.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Oreochromis
niloticus]
Length = 1245
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 3 ALPFESKPKDI-PIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQ 55
ALPF+SKPK + P K+P R +V+ EP ERKV L++ L + + K K Q
Sbjct: 1137 ALPFKSKPKLLQPKGKVPRDLKRASVIREPHERKVAELLRALSTVHHHKKKVAQ 1190
>gi|393212461|gb|EJC97961.1| GTP binding protein [Fomitiporia mediterranea MF3/22]
Length = 1162
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIR 47
AALP+ SKPK + + +RAVV+EP+E++ AL+Q + +R
Sbjct: 1051 AALPYASKPKLMKAQHRQTYMQKRAVVLEPEEKRAIALLQQARALR 1096
>gi|71023279|ref|XP_761869.1| hypothetical protein UM05722.1 [Ustilago maydis 521]
gi|46100744|gb|EAK85977.1| hypothetical protein UM05722.1 [Ustilago maydis 521]
Length = 1165
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKK 58
A LPF+SKPK + +RAVV+E E+K AL+Q ++ ++ +K K++ K
Sbjct: 1061 AQLPFKSKPKQMSASNNTSYLAKRAVVLEGDEKKALALLQQMKTVQREKEDKRKAKN 1117
>gi|390602961|gb|EIN12353.1| GTP binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 1157
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 2 AALPFESKPK-DIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVP 60
AALP+ SKPK P K + + +RAVV+EP+E+K AL+Q ++ +R ++ +++ K+
Sbjct: 1048 AALPYASKPKIQKPQGKQTYLQ-KRAVVLEPEEKKAIALLQQVRALRKDQVARRRQKQDE 1106
Query: 61 KK 62
+K
Sbjct: 1107 RK 1108
>gi|417406302|gb|JAA49815.1| Putative ribosome bioproteinsis protein bms1 [Desmodus rotundus]
Length = 1292
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K P R V+ EP ERK+ AL+ L + KMKK
Sbjct: 1183 ALPFKNKPKTQAKAGKTPRDRLRPTVIREPHERKILALLDALSTVHGHKMKK 1234
>gi|417406290|gb|JAA49809.1| Putative ribosome bioproteinsis protein bms1 [Desmodus rotundus]
Length = 1284
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKK 53
ALPF++KPK K P R V+ EP ERK+ AL+ L + KMKK
Sbjct: 1175 ALPFKNKPKTQAKAGKTPRDRLRPTVIREPHERKILALLDALSTVHGHKMKK 1226
>gi|452824836|gb|EME31836.1| hypothetical protein Gasu_09100 [Galdieria sulphuraria]
Length = 1082
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAV---VMEPQERKVHALVQHLQLIRNKKMKKQQ 55
A LPF SKPK I ++ N V V +P+ERK Q L IRN++ KK++
Sbjct: 979 ATLPFSSKPKQISAKEKQRRSNLEKVMSAVTDPEERKEQKTFQMLNTIRNERTKKRE 1035
>gi|449672005|ref|XP_004207611.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
[Hydra magnipapillata]
Length = 126
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 4 LPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHL 43
LPF++KPK+ RK E +RAVV+EP E+KV L++ +
Sbjct: 22 LPFKTKPKNQVKRKQKTYETKRAVVLEPDEKKVVRLMKGI 61
>gi|66806703|ref|XP_637074.1| BMS1-like ribosome biogenesis protein [Dictyostelium discoideum AX4]
gi|60465507|gb|EAL63592.1| BMS1-like ribosome biogenesis protein [Dictyostelium discoideum AX4]
Length = 1205
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 2 AALPFESKPKDIPIRKLPFPE--NRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQ 55
+ LPF+ KPK I K + R ++EP E++V L++ L+ I+NKK++K+Q
Sbjct: 1102 SQLPFDLKPKGTKIIKNADDALLSSRVNIIEPHEKQVADLMRRLESIKNKKIEKEQ 1157
>gi|170088861|ref|XP_001875653.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648913|gb|EDR13155.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1094
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIR 47
A+LP+ SKPK + ++ +R VVMEP+E+K AL+Q ++ +R
Sbjct: 983 ASLPYASKPKLMKPQQNQTYLQKRVVVMEPEEKKAVALLQQIRALR 1028
>gi|388857027|emb|CCF49447.1| probable BMS1-GTP-binding protein, required for distinct steps of 40S
ribosome biogenesis [Ustilago hordei]
Length = 1154
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIR 47
A LPF+SKPK + K +RAVV+E E+K AL+Q ++ ++
Sbjct: 1051 AELPFKSKPKQMQAAKGTCYLAKRAVVLEGDEKKALALLQQMKTVQ 1096
>gi|326923220|ref|XP_003207837.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Meleagris
gallopavo]
Length = 1452
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 3 ALPFESKPKDIPIR-KLPFPENRRAVVMEPQERKVHALVQHLQLI 46
ALPF++KPK++ + K P + R AV+ EP E+K+ AL+ L +
Sbjct: 1341 ALPFKNKPKNLEKKGKTPKDQWRPAVIREPHEKKISALLDALSTV 1385
>gi|74221473|dbj|BAE21470.1| unnamed protein product [Mus musculus]
Length = 1223
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 3 ALPFESKPKD-IPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRN 48
ALPF++KPK K+P R AV+ EP ERKV AL+ L I +
Sbjct: 1177 ALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHS 1223
>gi|393243106|gb|EJD50622.1| DUF663-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1132
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 2 AALPFESKPKDI-PIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKK 58
A+LP+ SKP+ + P R+ + + +RAVV+EP+E++ L+Q ++ +R ++ +++ K+
Sbjct: 1018 ASLPYASKPRVMKPQRRQTYLQ-KRAVVLEPEEKRAITLLQQMRALRKDQVARRKDKQ 1074
>gi|403171810|ref|XP_003331002.2| hypothetical protein PGTG_12965 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169585|gb|EFP86583.2| hypothetical protein PGTG_12965 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1182
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 2 AALPFESKPKDIPIRKLPFPENRRAVVMEPQERKVHALVQHLQLIRNKKMKKQQFKKVPK 61
++LPF SKPK + P +R V+++P+ERK +Q Q + +++K++ K K
Sbjct: 1063 SSLPFASKPKYQKPQSKPTYLQQRTVLLQPEERKTLGALQQAQAVTKVRIEKRKETKAKK 1122
Query: 62 -----KKMKKRH--GGR 71
KK+++ H GGR
Sbjct: 1123 NAERIKKIERSHEAGGR 1139
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,133,047,468
Number of Sequences: 23463169
Number of extensions: 36241193
Number of successful extensions: 155016
Number of sequences better than 100.0: 263
Number of HSP's better than 100.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 154718
Number of HSP's gapped (non-prelim): 316
length of query: 73
length of database: 8,064,228,071
effective HSP length: 44
effective length of query: 29
effective length of database: 7,031,848,635
effective search space: 203923610415
effective search space used: 203923610415
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)