Your job contains 1 sequence.
>035092
MHFYFINAGVEGTGDVCAVQLITKFGSLENLLQCVYQVEEERTRKALITFADQAVLSKNL
VIIIAFSSTCYLV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035092
(73 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083775 - symbol:AT3G52050 species:3702 "Arabi... 150 6.9e-10 1
TIGR_CMR|ECH_0080 - symbol:ECH_0080 "DNA polymerase I" sp... 115 1.1e-05 1
TIGR_CMR|APH_0001 - symbol:APH_0001 "DNA polymerase I" sp... 112 2.1e-05 1
TIGR_CMR|BA_4831 - symbol:BA_4831 "DNA polymerase I" spec... 105 0.00012 1
UNIPROTKB|Q0C2B4 - symbol:polA "DNA polymerase I" species... 100 0.00044 1
>TAIR|locus:2083775 [details] [associations]
symbol:AT3G52050 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA]
InterPro:IPR002421 InterPro:IPR008918 InterPro:IPR020045
InterPro:IPR020046 Pfam:PF01367 Pfam:PF02739 SMART:SM00279
SMART:SM00475 EMBL:CP002686 GO:GO:0003677 GO:GO:0008152
EMBL:AL049711 GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807
IPI:IPI00846770 RefSeq:NP_001078270.1 UniGene:At.50269
ProteinModelPortal:A8MQG8 SMR:A8MQG8 STRING:A8MQG8 PaxDb:A8MQG8
PRIDE:A8MQG8 EnsemblPlants:AT3G52050.3 GeneID:824368
KEGG:ath:AT3G52050 TAIR:At3g52050 HOGENOM:HOG000015113 OMA:HDGVPYG
PhylomeDB:A8MQG8 ProtClustDB:CLSN2680900 Genevestigator:A8MQG8
Uniprot:A8MQG8
Length = 448
Score = 150 (57.9 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 29/55 (52%), Positives = 45/55 (81%)
Query: 9 GVEGTGDVCAVQLITKFGSLENLLQCVYQVEEERTRKALITFADQAVLSKNLVII 63
GV+G G+V AV+LI++FG+LENLLQ V +++E + +++LI ADQA+LSK L ++
Sbjct: 332 GVDGIGNVHAVELISRFGTLENLLQSVDEIKEGKIKESLIASADQAILSKKLALL 386
>TIGR_CMR|ECH_0080 [details] [associations]
symbol:ECH_0080 "DNA polymerase I" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR003583 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447 SMART:SM00278
SMART:SM00279 SMART:SM00475 SMART:SM00482 GO:GO:0003677
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 GO:GO:0003887 GO:GO:0008409 eggNOG:COG0258
SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK TIGRFAMs:TIGR00593
HOGENOM:HOG000020999 RefSeq:YP_506910.1 ProteinModelPortal:Q2GI23
STRING:Q2GI23 GeneID:3927608 KEGG:ech:ECH_0080 PATRIC:20575721
BioCyc:ECHA205920:GJNR-80-MONOMER Uniprot:Q2GI23
Length = 944
Score = 115 (45.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 9 GVEGTGDVCAVQLITKFGSLENLLQCVYQVEEERTRKALITFADQAVLSKNLVII 63
G+ G G A +L+ FGSL+NLL V++V+ + R+++ ++DQA+LS+ LV +
Sbjct: 188 GIPGIGVKTAAKLLNDFGSLDNLLLHVHEVKTNKCRESITQYSDQAILSRQLVTL 242
>TIGR_CMR|APH_0001 [details] [associations]
symbol:APH_0001 "DNA polymerase I" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR008918 InterPro:IPR012337
InterPro:IPR018320 InterPro:IPR019760 InterPro:IPR020045
InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367 Pfam:PF02739
PRINTS:PR00868 PROSITE:PS00447 SMART:SM00279 SMART:SM00475
SMART:SM00482 GO:GO:0003677 GO:GO:0006260 EMBL:CP000235
GenomeReviews:CP000235_GR SUPFAM:SSF53098 GO:GO:0003887
GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK
ProtClustDB:PRK05755 TIGRFAMs:TIGR00593 HOGENOM:HOG000020999
RefSeq:YP_504640.1 ProteinModelPortal:Q2GLW1 STRING:Q2GLW1
GeneID:3930741 KEGG:aph:APH_0001 PATRIC:20948540
BioCyc:APHA212042:GHPM-43-MONOMER Uniprot:Q2GLW1
Length = 853
Score = 112 (44.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 9 GVEGTGDVCAVQLITKFGSLENLLQCVYQVEEERTRKALITFADQAVLSKNLV 61
GV G A +LI +FGSL+N+L V QV +++ R L +AD+A+LS++L+
Sbjct: 190 GVPSIGVKTAAKLINEFGSLDNVLNSVEQVAQKKCRDMLTEYADRAILSRDLI 242
>TIGR_CMR|BA_4831 [details] [associations]
symbol:BA_4831 "DNA polymerase I" species:198094 "Bacillus
anthracis str. Ames" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
InterPro:IPR001098 InterPro:IPR002298 InterPro:IPR002421
InterPro:IPR002562 InterPro:IPR008918 InterPro:IPR012337
InterPro:IPR018320 InterPro:IPR019760 InterPro:IPR020045
InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367 Pfam:PF02739
PRINTS:PR00868 PROSITE:PS00447 SMART:SM00279 SMART:SM00474
SMART:SM00475 SMART:SM00482 EMBL:AE016879 EMBL:AE017334
GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0006260 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GO:GO:0003887 GO:GO:0008409 SUPFAM:SSF47807 HOGENOM:HOG000020998
KO:K02335 OMA:EQRRYAK ProtClustDB:PRK05755 TIGRFAMs:TIGR00593
RefSeq:NP_847034.1 RefSeq:YP_021476.2 HSSP:P52026
ProteinModelPortal:Q81L03 SMR:Q81L03 IntAct:Q81L03
EnsemblBacteria:EBBACT00000010925 EnsemblBacteria:EBBACT00000018409
GeneID:1083984 GeneID:2815024 KEGG:ban:BA_4831 KEGG:bar:GBAA_4831
PATRIC:18787240 BioCyc:BANT261594:GJ7F-4693-MONOMER Uniprot:Q81L03
Length = 877
Score = 105 (42.0 bits), Expect = 0.00012, P = 0.00012
Identities = 21/56 (37%), Positives = 38/56 (67%)
Query: 9 GVEGTGDVCAVQLITKFGSLENLLQCVYQVEEERTRKALITFADQAVLSKNLVIII 64
GV G G+ A++L+T+FG++E + + + QV ++ ++ L DQA++SK+L II
Sbjct: 192 GVPGVGEKTAIKLLTQFGTVEEVYENIDQVSGKKLKEKLEANKDQALMSKDLATII 247
>UNIPROTKB|Q0C2B4 [details] [associations]
symbol:polA "DNA polymerase I" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR002562 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00279 SMART:SM00474 SMART:SM00475 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:CP000158 GenomeReviews:CP000158_GR GO:GO:0003887
GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK
TIGRFAMs:TIGR00593 RefSeq:YP_760129.1 ProteinModelPortal:Q0C2B4
STRING:Q0C2B4 GeneID:4289511 KEGG:hne:HNE_1412 PATRIC:32215643
HOGENOM:HOG000020999 BioCyc:HNEP228405:GI69-1446-MONOMER
Uniprot:Q0C2B4
Length = 929
Score = 100 (40.3 bits), Expect = 0.00044, P = 0.00044
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 9 GVEGTGDVCAVQLITKFGSLENLLQCVYQVEEERTRKALITFADQAVLSKNLV 61
G G G A QL+ ++G++E LL+ ++++ + R+ LI FADQ +SK LV
Sbjct: 200 GAPGIGIKTAAQLLGEYGTVEALLERAGEIKQPKRRETLINFADQVRVSKQLV 252
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.139 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 73 73 0.00091 102 3 11 22 0.40 28
29 0.45 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 471 (50 KB)
Total size of DFA: 84 KB (2065 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.40u 0.23s 8.63t Elapsed: 00:00:01
Total cpu time: 8.41u 0.23s 8.64t Elapsed: 00:00:01
Start: Fri May 10 05:28:35 2013 End: Fri May 10 05:28:36 2013