Your job contains 1 sequence.
>035093
MLSLTFQLIMKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEE
KDVVVFISTLHGG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035093
(73 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:4515103292 - symbol:AT3G61113 "AT3G61113" spec... 324 3.4e-29 1
TAIR|locus:4010713712 - symbol:AT2G45695 "AT2G45695" spec... 308 1.7e-27 1
ZFIN|ZDB-GENE-091204-300 - symbol:urm1 "ubiquitin related... 252 1.5e-21 1
RGD|1306599 - symbol:Urm1 "ubiquitin related modifier 1" ... 243 1.3e-20 1
UNIPROTKB|Q5ZJU4 - symbol:URM1 "Ubiquitin-related modifie... 240 2.7e-20 1
UNIPROTKB|Q148F0 - symbol:URM1 "Ubiquitin-related modifie... 238 4.4e-20 1
UNIPROTKB|Q9BTM9 - symbol:URM1 "Ubiquitin-related modifie... 238 4.4e-20 1
UNIPROTKB|A9YUB5 - symbol:URM1 "Ubiquitin-related modifie... 238 4.4e-20 1
UNIPROTKB|E2QUA4 - symbol:URM1 "Uncharacterized protein" ... 237 5.7e-20 1
UNIPROTKB|F1RR84 - symbol:URM1 "Uncharacterized protein" ... 237 5.7e-20 1
MGI|MGI:1915455 - symbol:Urm1 "ubiquitin related modifier... 237 5.7e-20 1
FB|FBgn0053276 - symbol:CG33276 species:7227 "Drosophila ... 220 3.6e-18 1
DICTYBASE|DDB_G0283737 - symbol:urm1 "ubiquitin-related m... 210 4.1e-17 1
SGD|S000001270 - symbol:URM1 "Ubiquitin-like protein invo... 158 1.3e-11 1
CGD|CAL0006418 - symbol:orf19.2299 species:5476 "Candida ... 157 1.7e-11 1
POMBASE|SPCC548.04 - symbol:urm1 "ubiquitin family protei... 145 3.2e-10 1
WB|WBGene00185048 - symbol:urm-1 species:6239 "Caenorhabd... 122 8.7e-08 1
GENEDB_PFALCIPARUM|PF11_0393 - symbol:PF11_0393 "hypothet... 107 3.4e-06 1
UNIPROTKB|Q8IHY3 - symbol:PF11_0393 "Ubiquitin related mo... 107 3.4e-06 1
>TAIR|locus:4515103292 [details] [associations]
symbol:AT3G61113 "AT3G61113" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IEA] [GO:0034227 "tRNA thio-modification"
evidence=IEA] UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL137898 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
eggNOG:COG5131 HOGENOM:HOG000280990 KO:K12161
ProtClustDB:CLSN2696720 PANTHER:PTHR14986 IPI:IPI00891147
RefSeq:NP_001118872.1 UniGene:At.73553 ProteinModelPortal:B3H7G2
SMR:B3H7G2 STRING:B3H7G2 EnsemblPlants:AT3G61113.1 GeneID:6241165
KEGG:ath:AT3G61113 TAIR:At3g61113 OMA:WELMGEL PhylomeDB:B3H7G2
Genevestigator:B3H7G2 Uniprot:B3H7G2
Length = 99
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 61/66 (92%), Positives = 64/66 (96%)
Query: 8 LIMKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFI 67
L MKDLLSWV TNLIKERPEMFMKGD+VRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFI
Sbjct: 34 LTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEDKDVIVFI 93
Query: 68 STLHGG 73
STLHGG
Sbjct: 94 STLHGG 99
>TAIR|locus:4010713712 [details] [associations]
symbol:AT2G45695 "AT2G45695" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IEA] [GO:0034227 "tRNA thio-modification"
evidence=IEA] UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.10.20.30 InterPro:IPR012675
EMBL:AC003680 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
EMBL:DQ487520 EMBL:DQ652667 EMBL:AK220657 IPI:IPI00570394
RefSeq:NP_001078064.1 UniGene:At.47809 ProteinModelPortal:A0MDQ1
SMR:A0MDQ1 PaxDb:A0MDQ1 PRIDE:A0MDQ1 EnsemblPlants:AT2G45695.1
GeneID:5007965 KEGG:ath:AT2G45695 TAIR:At2g45695 eggNOG:COG5131
HOGENOM:HOG000280990 KO:K12161 OMA:EYDTVIE PhylomeDB:A0MDQ1
ProtClustDB:CLSN2696720 Genevestigator:A0MDQ1 PANTHER:PTHR14986
Uniprot:A0MDQ1
Length = 101
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 58/64 (90%), Positives = 61/64 (95%)
Query: 10 MKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
MK LLSWV TNLIKERPEMFMKGD+VRPGVLVLVNDCDWELSGQLDT +E+KDVVVFIST
Sbjct: 38 MKHLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTVIEDKDVVVFIST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>ZFIN|ZDB-GENE-091204-300 [details] [associations]
symbol:urm1 "ubiquitin related modifier 1"
species:7955 "Danio rerio" [GO:0034227 "tRNA thio-modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379
ZFIN:ZDB-GENE-091204-300 GO:GO:0005737 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
PANTHER:PTHR14986 GeneTree:ENSGT00390000005101 EMBL:BX323065
IPI:IPI00995913 Ensembl:ENSDART00000142895 ArrayExpress:F2Z4T6
Bgee:F2Z4T6 Uniprot:F2Z4T6
Length = 101
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 44/64 (68%), Positives = 56/64 (87%)
Query: 10 MKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
MK LL+W+ N++KERPE+FM+GD+VRPG+LVL+ND DWEL G+LD L++KD VVFIST
Sbjct: 38 MKQLLAWIRGNMLKERPELFMQGDTVRPGILVLINDADWELMGELDYQLQDKDNVVFIST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>RGD|1306599 [details] [associations]
symbol:Urm1 "ubiquitin related modifier 1" species:10116 "Rattus
norvegicus" [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016783
"sulfurtransferase activity" evidence=IEA] [GO:0034227 "tRNA
thio-modification" evidence=IEA] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379 RGD:1306599
GO:GO:0005737 Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0002098
GO:GO:0016783 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
eggNOG:COG5131 HOGENOM:HOG000280990 KO:K12161 PANTHER:PTHR14986
OMA:WELMGEL CTD:81605 GeneTree:ENSGT00390000005101
HOVERGEN:HBG059837 OrthoDB:EOG4H4658 EMBL:BC169094 IPI:IPI00372071
RefSeq:NP_001131034.2 UniGene:Rn.6516 STRING:B6ID11
Ensembl:ENSRNOT00000037494 GeneID:311840 KEGG:rno:311840
NextBio:664273 Genevestigator:B6ID11 Uniprot:B6ID11
Length = 101
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 41/64 (64%), Positives = 57/64 (89%)
Query: 10 MKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
+++LL W+ TNL+KERPE+F++GDSVRPG+LVL+ND DWEL G+LD L+++D ++FIST
Sbjct: 38 IRNLLVWIKTNLLKERPELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSILFIST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>UNIPROTKB|Q5ZJU4 [details] [associations]
symbol:URM1 "Ubiquitin-related modifier 1 homolog"
species:9031 "Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016783 "sulfurtransferase activity" evidence=IEA] [GO:0002098
"tRNA wobble uridine modification" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379 GO:GO:0005737
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0002098 GO:GO:0016783
GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285 eggNOG:COG5131
HOGENOM:HOG000280990 KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL
CTD:81605 GeneTree:ENSGT00390000005101 HOVERGEN:HBG059837
OrthoDB:EOG4H4658 EMBL:AJ720340 IPI:IPI00582291
RefSeq:NP_001007844.1 UniGene:Gga.7515 HSSP:Q9D2P4
ProteinModelPortal:Q5ZJU4 SMR:Q5ZJU4 STRING:Q5ZJU4
Ensembl:ENSGALT00000007972 GeneID:417221 KEGG:gga:417221
InParanoid:Q5ZJU4 NextBio:20820564 Uniprot:Q5ZJU4
Length = 101
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 41/64 (64%), Positives = 56/64 (87%)
Query: 10 MKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
+++LL W+ NL+KERPE+FM+G+SVRPG+LVL+ND DWEL G+LD L+++D V+FIST
Sbjct: 38 IRNLLKWIKQNLLKERPELFMQGESVRPGILVLINDADWELMGELDYKLQDQDNVLFIST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>UNIPROTKB|Q148F0 [details] [associations]
symbol:URM1 "Ubiquitin-related modifier 1 homolog"
species:9913 "Bos taurus" [GO:0034227 "tRNA thio-modification"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016783
"sulfurtransferase activity" evidence=IEA] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379 GO:GO:0005737
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0002098 GO:GO:0016783
GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285 eggNOG:COG5131
HOGENOM:HOG000280990 KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL
EMBL:BC118391 IPI:IPI00699527 RefSeq:NP_001069197.1
RefSeq:NP_001178049.1 UniGene:Bt.87900 ProteinModelPortal:Q148F0
SMR:Q148F0 Ensembl:ENSBTAT00000036128 GeneID:515890 GeneID:781062
KEGG:bta:515890 KEGG:bta:781062 CTD:81605
GeneTree:ENSGT00390000005101 HOVERGEN:HBG059837 InParanoid:Q148F0
OrthoDB:EOG4H4658 NextBio:20872042 Uniprot:Q148F0
Length = 101
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 42/64 (65%), Positives = 55/64 (85%)
Query: 10 MKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
++ LL W+ NL+KERPE+F++GDSVRPG+LVLVND DWEL G+LD L+++D V+FIST
Sbjct: 38 IRSLLVWIKKNLLKERPELFIQGDSVRPGILVLVNDADWELLGELDYQLQDQDSVLFIST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>UNIPROTKB|Q9BTM9 [details] [associations]
symbol:URM1 "Ubiquitin-related modifier 1 homolog"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0002098 "tRNA wobble uridine modification"
evidence=IMP] [GO:0005829 "cytosol" evidence=IC] [GO:0034227 "tRNA
thio-modification" evidence=IMP] [GO:0016783 "sulfurtransferase
activity" evidence=IDA] UniPathway:UPA00988 InterPro:IPR015221
Pfam:PF09138 PIRSF:PIRSF037379 GO:GO:0005829 EMBL:CH471090
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0002098 EMBL:AL359091
GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
HOGENOM:HOG000280990 KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL
CTD:81605 HOVERGEN:HBG059837 OrthoDB:EOG4H4658 EMBL:AK001880
EMBL:AK300877 EMBL:BC003581 IPI:IPI00008445 IPI:IPI00910850
RefSeq:NP_001129419.1 RefSeq:NP_001252511.1 RefSeq:NP_112176.1
UniGene:Hs.495229 ProteinModelPortal:Q9BTM9 SMR:Q9BTM9
DIP:DIP-48631N IntAct:Q9BTM9 MINT:MINT-1401016 STRING:Q9BTM9
DMDM:68565265 PRIDE:Q9BTM9 Ensembl:ENST00000372850
Ensembl:ENST00000372853 Ensembl:ENST00000452446 GeneID:81605
KEGG:hsa:81605 UCSC:uc004buv.2 UCSC:uc011may.1
GeneCards:GC09P131133 HGNC:HGNC:28378 MIM:612693 neXtProt:NX_Q9BTM9
PharmGKB:PA162408677 eggNOG:NOG282764 InParanoid:Q9BTM9
PhylomeDB:Q9BTM9 ChiTaRS:URM1 GenomeRNAi:81605 NextBio:71912
ArrayExpress:Q9BTM9 Bgee:Q9BTM9 CleanEx:HS_URM1
Genevestigator:Q9BTM9 GermOnline:ENSG00000167118 Uniprot:Q9BTM9
Length = 101
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 41/64 (64%), Positives = 56/64 (87%)
Query: 10 MKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
+++LL W+ NL+KERPE+F++GDSVRPG+LVL+ND DWEL G+LD L+++D V+FIST
Sbjct: 38 IRNLLIWIKKNLLKERPELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSVLFIST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>UNIPROTKB|A9YUB5 [details] [associations]
symbol:URM1 "Ubiquitin-related modifier 1 homolog"
species:9925 "Capra hircus" [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0034227 "tRNA thio-modification"
evidence=ISS] UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 GO:GO:0005737 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0002098 GO:GO:0034227 InterPro:IPR016155
SUPFAM:SSF54285 PANTHER:PTHR14986 HOVERGEN:HBG059837 EMBL:EU295697
UniGene:Chi.20340 ProteinModelPortal:A9YUB5 SMR:A9YUB5
Uniprot:A9YUB5
Length = 101
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 42/64 (65%), Positives = 55/64 (85%)
Query: 10 MKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
++ LL W+ NL+KERPE+F++GDSVRPG+LVLVND DWEL G+LD L+++D V+FIST
Sbjct: 38 IRSLLVWIKKNLLKERPELFIQGDSVRPGILVLVNDADWELLGELDYQLQDQDSVLFIST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>UNIPROTKB|E2QUA4 [details] [associations]
symbol:URM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034227 "tRNA thio-modification"
evidence=IEA] [GO:0016783 "sulfurtransferase activity"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 GO:GO:0005737 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0002098 GO:GO:0016783 GO:GO:0034227
InterPro:IPR016155 SUPFAM:SSF54285 KO:K12161 PANTHER:PTHR14986
OMA:WELMGEL CTD:81605 GeneTree:ENSGT00390000005101
EMBL:AAEX03006856 RefSeq:XP_850726.1 Ensembl:ENSCAFT00000036436
GeneID:608549 KEGG:cfa:608549 NextBio:20894194 Uniprot:E2QUA4
Length = 101
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 41/64 (64%), Positives = 55/64 (85%)
Query: 10 MKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
++ LL W+ NL+KERPE+F++GDSVRPG+LVLVND DWEL G+LD L+++D ++FIST
Sbjct: 38 IRSLLVWIKKNLLKERPELFIQGDSVRPGILVLVNDADWELLGELDYQLQDQDSILFIST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>UNIPROTKB|F1RR84 [details] [associations]
symbol:URM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034227 "tRNA thio-modification" evidence=IEA]
[GO:0016783 "sulfurtransferase activity" evidence=IEA] [GO:0002098
"tRNA wobble uridine modification" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] UniPathway:UPA00988 InterPro:IPR015221
Pfam:PF09138 PIRSF:PIRSF037379 GO:GO:0005737 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0002098 GO:GO:0016783 GO:GO:0034227
InterPro:IPR016155 SUPFAM:SSF54285 KO:K12161 PANTHER:PTHR14986
OMA:WELMGEL CTD:81605 GeneTree:ENSGT00390000005101 EMBL:CU234126
RefSeq:NP_001230416.1 UniGene:Ssc.2196 UniGene:Ssc.59342
UniGene:Ssc.94767 Ensembl:ENSSSCT00000006211 GeneID:100154341
KEGG:ssc:100154341 Uniprot:F1RR84
Length = 101
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 40/64 (62%), Positives = 56/64 (87%)
Query: 10 MKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
+++LL W+ NL+KERPE+F++GDSVRPG+LVL+ND DWEL G+LD L+++D ++FIST
Sbjct: 38 VRNLLVWIKKNLLKERPELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSILFIST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>MGI|MGI:1915455 [details] [associations]
symbol:Urm1 "ubiquitin related modifier 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0002098 "tRNA wobble
uridine modification" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0034227 "tRNA
thio-modification" evidence=ISO] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379 MGI:MGI:1915455
GO:GO:0005737 Gene3D:3.10.20.30 InterPro:IPR012675 EMBL:CH466542
GO:GO:0002098 GO:GO:0016783 GO:GO:0034227 InterPro:IPR016155
SUPFAM:SSF54285 EMBL:AL928926 eggNOG:COG5131 HOGENOM:HOG000280990
KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL CTD:81605
GeneTree:ENSGT00390000005101 HOVERGEN:HBG059837 OrthoDB:EOG4H4658
ChiTaRS:URM1 EMBL:AK019352 EMBL:AK049227 EMBL:AK049849
EMBL:BC026994 IPI:IPI00457538 RefSeq:NP_080891.1 UniGene:Mm.20273
PDB:1WGK PDB:1XO3 PDBsum:1WGK PDBsum:1XO3 ProteinModelPortal:Q9D2P4
SMR:Q9D2P4 STRING:Q9D2P4 PaxDb:Q9D2P4 PRIDE:Q9D2P4 DNASU:68205
Ensembl:ENSMUST00000091142 GeneID:68205 KEGG:mmu:68205
UCSC:uc008jag.1 InParanoid:A3KGW2 EvolutionaryTrace:Q9D2P4
NextBio:326704 Bgee:Q9D2P4 Genevestigator:Q9D2P4
GermOnline:ENSMUSG00000069020 Uniprot:Q9D2P4
Length = 101
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 40/64 (62%), Positives = 56/64 (87%)
Query: 10 MKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
+++LL W+ NL+KERPE+F++GDSVRPG+LVL+ND DWEL G+LD L+++D ++FIST
Sbjct: 38 IRNLLVWIKKNLLKERPELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSILFIST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>FB|FBgn0053276 [details] [associations]
symbol:CG33276 species:7227 "Drosophila melanogaster"
[GO:0004252 "serine-type endopeptidase activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0034227 "tRNA thio-modification" evidence=IEA]
UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 GO:GO:0005737 EMBL:AE014296 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
eggNOG:COG5131 KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL
GeneTree:ENSGT00390000005101 HSSP:Q9D2P4 EMBL:BT030919
RefSeq:NP_996018.2 ProteinModelPortal:Q7KU86 SMR:Q7KU86
STRING:Q7KU86 EnsemblMetazoa:FBtr0114530 GeneID:2768949
KEGG:dme:Dmel_CG33276 UCSC:CG33276-RB FlyBase:FBgn0053276
InParanoid:Q7KU86 OrthoDB:EOG44J11M PhylomeDB:Q7KU86
GenomeRNAi:2768949 NextBio:848773 Bgee:Q7KU86 Uniprot:Q7KU86
Length = 101
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 38/62 (61%), Positives = 51/62 (82%)
Query: 12 DLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLH 71
+LL W+ N++ ERPE+F++GD+VRPG+LVL+ND DWEL G+LD L+ D V+FISTLH
Sbjct: 40 NLLKWMHANILTERPELFLQGDTVRPGILVLINDTDWELLGELDYELQPNDNVLFISTLH 99
Query: 72 GG 73
GG
Sbjct: 100 GG 101
>DICTYBASE|DDB_G0283737 [details] [associations]
symbol:urm1 "ubiquitin-related modifier 1"
species:44689 "Dictyostelium discoideum" [GO:0034227 "tRNA
thio-modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 dictyBase:DDB_G0283737 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
eggNOG:COG5131 KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL HSSP:Q9D2P4
RefSeq:XP_638993.1 ProteinModelPortal:Q54QN0 STRING:Q54QN0
EnsemblProtists:DDB0185658 GeneID:8624239 KEGG:ddi:DDB_G0283737
ProtClustDB:CLSZ2497189 Uniprot:Q54QN0
Length = 96
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 36/67 (53%), Positives = 53/67 (79%)
Query: 7 QLIMKDLLSWVGTNLIKERPEMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVF 66
++ +KDL+ ++ NL+KER E+F+ D+VRPG+LVL+ND DWEL G + +E+KD ++F
Sbjct: 30 EIPLKDLILYMRDNLLKERSELFVVDDTVRPGILVLINDADWELFGGISYNVEDKDTIIF 89
Query: 67 ISTLHGG 73
ISTLHGG
Sbjct: 90 ISTLHGG 96
>SGD|S000001270 [details] [associations]
symbol:URM1 "Ubiquitin-like protein involved in thiolation of
cytoplasmic tRNAs" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0031386 "protein tag"
evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0034599 "cellular response to oxidative stress"
evidence=IMP;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0002143
"tRNA wobble position uridine thiolation" evidence=IMP] [GO:0034227
"tRNA thio-modification" evidence=IEA] [GO:0002098 "tRNA wobble
uridine modification" evidence=IMP] [GO:0007114 "cell budding"
evidence=IGI] [GO:0001403 "invasive growth in response to glucose
limitation" evidence=IGI;IMP] [GO:0032447 "protein urmylation"
evidence=IDA] [GO:0008033 "tRNA processing" evidence=IEA]
UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 SGD:S000001270 GO:GO:0005829 GO:GO:0005634
EMBL:BK006942 GO:GO:0034599 Gene3D:3.10.20.30 InterPro:IPR012675
GO:GO:0001403 GO:GO:0031386 EMBL:Z38113 GO:GO:0007114 GO:GO:0032447
GO:GO:0002143 InterPro:IPR016155 SUPFAM:SSF54285 RefSeq:NP_012264.3
GeneID:854815 KEGG:sce:YIL002C eggNOG:COG5131 HOGENOM:HOG000280990
KO:K12161 OMA:EYDTVIE PANTHER:PTHR14986
GeneTree:ENSGT00390000005101 OrthoDB:EOG4XPTRH EMBL:AY558295
PIR:S48449 RefSeq:NP_012258.3 PDB:2AX5 PDB:2PKO PDB:2QJL
PDBsum:2AX5 PDBsum:2PKO PDBsum:2QJL ProteinModelPortal:P40554
SMR:P40554 DIP:DIP-1894N IntAct:P40554 MINT:MINT-395676
STRING:P40554 PaxDb:P40554 PeptideAtlas:P40554 EnsemblFungi:YIL008W
GeneID:854809 KEGG:sce:YIL008W CYGD:YIL008w
EvolutionaryTrace:P40554 NextBio:977633 Genevestigator:P40554
GermOnline:YIL008W Uniprot:P40554
Length = 99
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 12 DLLSWVGTNLIKERPEM--FMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
DL+ + + +I ++ F++ DS+RPG++ L+ND DWEL G+ D LE+ D++ F ST
Sbjct: 36 DLIDHIVSTMINNPNDVSIFIEDDSIRPGIITLINDTDWELEGEKDYILEDGDIISFTST 95
Query: 70 LHGG 73
LHGG
Sbjct: 96 LHGG 99
>CGD|CAL0006418 [details] [associations]
symbol:orf19.2299 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031386 "protein tag" evidence=IEA] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IEA] [GO:0007114
"cell budding" evidence=IEA] [GO:0032447 "protein urmylation"
evidence=IEA] [GO:0034599 "cellular response to oxidative stress"
evidence=IEA] [GO:0002143 "tRNA wobble position uridine thiolation"
evidence=IEA] UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 CGD:CAL0006418 GO:GO:0005737 Gene3D:3.10.20.30
InterPro:IPR012675 EMBL:AACQ01000114 EMBL:AACQ01000113
GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285 eggNOG:COG5131
KO:K12161 PANTHER:PTHR14986 RefSeq:XP_713904.1 RefSeq:XP_713962.1
HSSP:P40554 ProteinModelPortal:Q59WK2 SMR:Q59WK2 STRING:Q59WK2
GeneID:3644361 GeneID:3644399 KEGG:cal:CaO19.2299
KEGG:cal:CaO19.9835 Uniprot:Q59WK2
Length = 101
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 12 DLLSWVGTNLIKERPEM--FMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFIST 69
DL++++ N+I + ++ F++ +VRPG+LVL+ND DWEL G + +E DV F ST
Sbjct: 38 DLITYITKNIISDPKDIPVFIEDGTVRPGILVLINDTDWELEGMEEYVIESGDVFTFTST 97
Query: 70 LHGG 73
LHGG
Sbjct: 98 LHGG 101
>POMBASE|SPCC548.04 [details] [associations]
symbol:urm1 "ubiquitin family protein Urm1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0031386 "protein tag" evidence=ISO]
[GO:0032447 "protein urmylation" evidence=ISO] [GO:0034227 "tRNA
thio-modification" evidence=IEA] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379
PomBase:SPCC548.04 GO:GO:0005829 GO:GO:0005634 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:3.10.20.30 InterPro:IPR012675
GO:GO:0031386 GO:GO:0034227 GO:GO:0032447 InterPro:IPR016155
SUPFAM:SSF54285 eggNOG:COG5131 HOGENOM:HOG000280990 KO:K12161
PANTHER:PTHR14986 HSSP:P40554 RefSeq:NP_587744.2 STRING:Q9P3U9
EnsemblFungi:SPCC548.04.1 GeneID:2538765 KEGG:spo:SPCC548.04
OMA:HEMNDGR OrthoDB:EOG4XPTRH NextBio:20799949 Uniprot:Q9P3U9
Length = 97
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 22 IKERP---EMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 73
I E+P ++F+ +VRPG++VLVND DWEL + + LEE D VVF+STLHGG
Sbjct: 43 IIEKPSQKDLFILNGTVRPGIIVLVNDQDWELLEKEEYNLEEGDEVVFVSTLHGG 97
>WB|WBGene00185048 [details] [associations]
symbol:urm-1 species:6239 "Caenorhabditis elegans"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0034227 "tRNA
thio-modification" evidence=IEA] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 GO:GO:0005737 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
EMBL:Z35640 OMA:EYDTVIE PANTHER:PTHR14986
GeneTree:ENSGT00390000005101 RefSeq:NP_001255080.1
UniGene:Cel.36366 ProteinModelPortal:C0P277 SMR:C0P277
EnsemblMetazoa:F43D9.6 GeneID:13191153 KEGG:cel:CELE_F43D9.6
CTD:13191153 WormBase:F43D9.6 Uniprot:C0P277
Length = 100
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 10 MKDLLSWVGTNLIKE--RPEMFMKGDS--VRPGVLVLVNDCDWELSGQLDTTLEEKDVVV 65
++D+L +V NL+ + R M + D+ V GV+ L+ND D L + DT +E D +
Sbjct: 33 LRDVLKFVRDNLVTDVHRINMLLNDDASEVAHGVITLINDTDTGLLLEYDTVIEAGDTIT 92
Query: 66 FISTLHGG 73
F+STLHGG
Sbjct: 93 FVSTLHGG 100
>GENEDB_PFALCIPARUM|PF11_0393 [details] [associations]
symbol:PF11_0393 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138 GO:GO:0005737
Gene3D:3.10.20.30 InterPro:IPR012675 EMBL:AE014186 GO:GO:0034227
InterPro:IPR016155 SUPFAM:SSF54285 HOGENOM:HOG000280990 KO:K12161
PANTHER:PTHR14986 RefSeq:XP_001348063.1 ProteinModelPortal:Q8IHY3
PRIDE:Q8IHY3 EnsemblProtists:PF11_0393:mRNA GeneID:810939
KEGG:pfa:PF11_0393 EuPathDB:PlasmoDB:PF3D7_1138100
ProtClustDB:CLSZ2500918 Uniprot:Q8IHY3
Length = 126
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 31 KGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 73
KG ++PG++VL+N+ DWE+ ++ D + F+STLHGG
Sbjct: 85 KG-KIKPGIIVLINEYDWEILDTYTYKIKNNDKICFLSTLHGG 126
>UNIPROTKB|Q8IHY3 [details] [associations]
symbol:PF11_0393 "Ubiquitin related modifier homologue"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138 GO:GO:0005737
Gene3D:3.10.20.30 InterPro:IPR012675 EMBL:AE014186 GO:GO:0034227
InterPro:IPR016155 SUPFAM:SSF54285 HOGENOM:HOG000280990 KO:K12161
PANTHER:PTHR14986 RefSeq:XP_001348063.1 ProteinModelPortal:Q8IHY3
PRIDE:Q8IHY3 EnsemblProtists:PF11_0393:mRNA GeneID:810939
KEGG:pfa:PF11_0393 EuPathDB:PlasmoDB:PF3D7_1138100
ProtClustDB:CLSZ2500918 Uniprot:Q8IHY3
Length = 126
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 31 KGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 73
KG ++PG++VL+N+ DWE+ ++ D + F+STLHGG
Sbjct: 85 KG-KIKPGIIVLINEYDWEILDTYTYKIKNNDKICFLSTLHGG 126
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.140 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 73 73 0.00091 102 3 11 22 0.50 28
29 0.45 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 528 (56 KB)
Total size of DFA: 101 KB (2071 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.50u 0.10s 8.60t Elapsed: 00:00:01
Total cpu time: 8.50u 0.10s 8.60t Elapsed: 00:00:01
Start: Fri May 10 05:28:54 2013 End: Fri May 10 05:28:55 2013