Your job contains 1 sequence.
>035100
MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ
IQQLKDAIEKLLI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035100
(73 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2127455 - symbol:AT4G22380 species:3702 "Arabi... 273 8.7e-24 1
TAIR|locus:2149269 - symbol:AT5G20160 species:3702 "Arabi... 273 8.7e-24 1
WB|WBGene00010896 - symbol:M28.5 species:6239 "Caenorhabd... 224 1.4e-18 1
CGD|CAL0002459 - symbol:orf19.5885 species:5476 "Candida ... 223 1.7e-18 1
POMBASE|SPAC607.03c - symbol:snu13 "U3 snoRNP-associated ... 221 2.8e-18 1
UNIPROTKB|F1NII6 - symbol:NHP2L1 "Uncharacterized protein... 220 3.6e-18 1
UNIPROTKB|Q3B8S0 - symbol:NHP2L1 "NHP2-like protein 1" sp... 219 4.6e-18 1
UNIPROTKB|E2RRM7 - symbol:NHP2L1 "Uncharacterized protein... 219 4.6e-18 1
UNIPROTKB|J9P8E9 - symbol:LOC609886 "Uncharacterized prot... 219 4.6e-18 1
UNIPROTKB|B1AHD1 - symbol:NHP2L1 "NHP2-like protein 1" sp... 219 4.6e-18 1
UNIPROTKB|P55769 - symbol:NHP2L1 "NHP2-like protein 1" sp... 219 4.6e-18 1
UNIPROTKB|F2Z5V3 - symbol:NHP2L1 "Uncharacterized protein... 219 4.6e-18 1
RGD|1303103 - symbol:Nhp2l1 "NHP2 non-histone chromosome ... 219 4.6e-18 1
FB|FBgn0015393 - symbol:hoip "hoi-polloi" species:7227 "D... 217 7.5e-18 1
SGD|S000000752 - symbol:SNU13 "RNA binding protein" speci... 213 2.0e-17 1
ZFIN|ZDB-GENE-030131-9670 - symbol:nhp2l1b "NHP2 non-hist... 208 6.7e-17 1
ZFIN|ZDB-GENE-040426-879 - symbol:nhp2l1a "NHP2 non-histo... 208 6.7e-17 1
UNIPROTKB|G4MRY0 - symbol:MGG_02467 "Ribonucleoprotein-as... 206 1.1e-16 1
RGD|1566078 - symbol:RGD1566078 "similar to NHP2-like pro... 206 1.1e-16 1
ASPGD|ASPL0000057404 - symbol:AN1319 species:162425 "Emer... 194 2.0e-15 1
DICTYBASE|DDB_G0282243 - symbol:nhp2l1 "non-histone chrom... 189 6.9e-15 1
GENEDB_PFALCIPARUM|PF11_0250 - symbol:PF11_0250 "high mob... 180 6.2e-14 1
UNIPROTKB|Q8IIC4 - symbol:PF11_0250 "High mobility group-... 180 6.2e-14 1
UNIPROTKB|J9NTQ4 - symbol:NHP2L1 "Uncharacterized protein... 178 1.0e-13 1
UNIPROTKB|Q5E950 - symbol:NHP2 "H/ACA ribonucleoprotein c... 94 8.1e-05 1
UNIPROTKB|E2QYZ9 - symbol:NHP2 "Uncharacterized protein" ... 94 8.1e-05 1
UNIPROTKB|Q9NX24 - symbol:NHP2 "H/ACA ribonucleoprotein c... 94 8.1e-05 1
UNIPROTKB|F1S3E3 - symbol:NHP2 "Uncharacterized protein" ... 94 8.1e-05 1
MGI|MGI:1098547 - symbol:Nhp2 "NHP2 ribonucleoprotein" sp... 92 0.00013 1
SGD|S000002367 - symbol:NHP2 "Protein related to mammalia... 92 0.00013 1
UNIPROTKB|Q5RC65 - symbol:NHP2 "H/ACA ribonucleoprotein c... 91 0.00017 1
RGD|1309435 - symbol:Nhp2 "NHP2 ribonucleoprotein" specie... 91 0.00017 1
FB|FBgn0029148 - symbol:NHP2 "NHP2" species:7227 "Drosoph... 91 0.00018 1
TAIR|locus:2181514 - symbol:AT5G08180 species:3702 "Arabi... 90 0.00022 1
UNIPROTKB|Q8I7X7 - symbol:Q8I7X7 "H/ACA ribonucleoprotein... 90 0.00024 1
UNIPROTKB|F1NNP9 - symbol:NHP2 "Uncharacterized protein" ... 88 0.00040 1
UNIPROTKB|Q6XIP0 - symbol:NHP2 "H/ACA ribonucleoprotein c... 88 0.00042 1
POMBASE|SPAC1782.10c - symbol:nhp2 "box H/ACA snoRNP comp... 87 0.00048 1
UNIPROTKB|Q6NTV9 - symbol:nhp2 "H/ACA ribonucleoprotein c... 86 0.00057 1
UNIPROTKB|Q6P8C4 - symbol:nhp2 "H/ACA ribonucleoprotein c... 86 0.00057 1
>TAIR|locus:2127455 [details] [associations]
symbol:AT4G22380 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0042254
GO:GO:0003723 GO:GO:0005840 eggNOG:COG1358 HOGENOM:HOG000055226
KO:K12845 OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 HSSP:P55769
EMBL:AY086674 EMBL:BT024580 IPI:IPI00546422 RefSeq:NP_193969.1
UniGene:At.70128 ProteinModelPortal:Q8LCC7 SMR:Q8LCC7 STRING:Q8LCC7
PRIDE:Q8LCC7 ProMEX:Q8LCC7 EnsemblPlants:AT4G22380.1 GeneID:828333
KEGG:ath:AT4G22380 TAIR:At4g22380 InParanoid:Q8LCC7
PhylomeDB:Q8LCC7 ProtClustDB:CLSN2685756 Genevestigator:Q8LCC7
Uniprot:Q8LCC7
Length = 128
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 57/73 (78%), Positives = 59/73 (80%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD AEDKNVPYVFVPSKQALGRACGVTRPV+ACSVTSNEASQLK+Q
Sbjct: 56 MAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ LKDAIEKLLI
Sbjct: 116 IQHLKDAIEKLLI 128
>TAIR|locus:2149269 [details] [associations]
symbol:AT5G20160 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 EMBL:CP002688
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529 KO:K12845
OMA:ANEGIRL IPI:IPI00533115 RefSeq:NP_850856.1 UniGene:At.23318
ProteinModelPortal:F4K455 SMR:F4K455 EnsemblPlants:AT5G20160.2
GeneID:832138 KEGG:ath:AT5G20160 PhylomeDB:F4K455 Uniprot:F4K455
Length = 160
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 57/73 (78%), Positives = 59/73 (80%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD AEDKNVPYVFVPSKQALGRACGVTRPV+ACSVTSNEASQLK+Q
Sbjct: 88 MAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQ 147
Query: 61 IQQLKDAIEKLLI 73
IQ LKDAIEKLLI
Sbjct: 148 IQHLKDAIEKLLI 160
>WB|WBGene00010896 [details] [associations]
symbol:M28.5 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0005730 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0000003 GO:GO:0005681
GO:GO:0042254 GO:GO:0003723 eggNOG:COG1358
GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 EMBL:Z49911
PIR:T23808 RefSeq:NP_496300.1 ProteinModelPortal:Q21568 SMR:Q21568
STRING:Q21568 PaxDb:Q21568 EnsemblMetazoa:M28.5.1
EnsemblMetazoa:M28.5.2 GeneID:174645 KEGG:cel:CELE_M28.5
UCSC:M28.5.1 CTD:174645 WormBase:M28.5 InParanoid:Q21568
NextBio:884890 Uniprot:Q21568
Length = 128
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 46/73 (63%), Positives = 53/73 (72%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SK ALGRACGVTRPV+A S+T NE SQLK+Q
Sbjct: 56 MAADAEPLEILLHLPLLCEDKNVPYVFVRSKAALGRACGVTRPVIAASITQNEGSQLKSQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ++K+ +EKLLI
Sbjct: 116 IQKIKEDVEKLLI 128
>CGD|CAL0002459 [details] [associations]
symbol:orf19.5885 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 CGD:CAL0002459 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 EMBL:AACQ01000003 EMBL:AACQ01000004 GO:GO:0006364
HSSP:P39990 eggNOG:COG1358 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_722954.1 RefSeq:XP_723101.1
ProteinModelPortal:Q5ANL6 SMR:Q5ANL6 STRING:Q5ANL6 GeneID:3635173
GeneID:3635369 KEGG:cal:CaO19.13306 KEGG:cal:CaO19.5885
Uniprot:Q5ANL6
Length = 126
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 47/73 (64%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAADT EDKNVPYVFVPSK ALGRACGV+RPV+A SVTSN+AS +K Q
Sbjct: 54 MAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASVTSNDASSIKNQ 113
Query: 61 IQQLKDAIEKLLI 73
I +KD IE LLI
Sbjct: 114 IYGIKDKIETLLI 126
>POMBASE|SPAC607.03c [details] [associations]
symbol:snu13 "U3 snoRNP-associated protein Snu13"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0032040 "small-subunit processome"
evidence=ISO] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 PomBase:SPAC607.03c
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0005681
GO:GO:0003723 GO:GO:0046540 GO:GO:0032040 GO:GO:0030490
GO:GO:0045292 HSSP:P39990 eggNOG:COG1358 HOGENOM:HOG000055226
KO:K12845 OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881
EMBL:AF087136 PIR:T50223 RefSeq:NP_593592.1
ProteinModelPortal:O74690 SMR:O74690 STRING:O74690
EnsemblFungi:SPAC607.03c.1 GeneID:2542663 KEGG:spo:SPAC607.03c
OrthoDB:EOG4VQDZT NextBio:20803711 Uniprot:O74690
Length = 125
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 47/73 (64%), Positives = 53/73 (72%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAADT EDKNVPYVFVPSK ALGRACGV+RPV++ S+T+NEAS L Q
Sbjct: 53 MAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISASITTNEASDLLPQ 112
Query: 61 IQQLKDAIEKLLI 73
IQ +K AIEKLLI
Sbjct: 113 IQAIKLAIEKLLI 125
>UNIPROTKB|F1NII6 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0030515 GO:GO:0042254 GO:GO:0030529
GeneTree:ENSGT00550000074840 OMA:QASNYKQ InterPro:IPR018492
PRINTS:PR00881 EMBL:AADN02006063 IPI:IPI00571358
Ensembl:ENSGALT00000019461 Uniprot:F1NII6
Length = 144
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRACGV+RPV+ACS+T E SQLK Q
Sbjct: 72 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSITIKEGSQLKPQ 131
Query: 61 IQQLKDAIEKLLI 73
IQ ++ AIE+LL+
Sbjct: 132 IQSVQQAIERLLV 144
>UNIPROTKB|Q3B8S0 [details] [associations]
symbol:NHP2L1 "NHP2-like protein 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0008380 GO:GO:0030515 GO:GO:0006397
GO:GO:0005681 GO:GO:0042254 EMBL:BC103317 IPI:IPI00696455
RefSeq:NP_001070472.1 UniGene:Bt.4185 HSSP:P39990
ProteinModelPortal:Q3B8S0 SMR:Q3B8S0 STRING:Q3B8S0 PRIDE:Q3B8S0
Ensembl:ENSBTAT00000008022 GeneID:767931 KEGG:bta:767931 CTD:4809
eggNOG:COG1358 GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226
HOVERGEN:HBG000328 InParanoid:Q3B8S0 KO:K12845 OMA:QASNYKQ
OrthoDB:EOG4M91T0 NextBio:20918288 InterPro:IPR018492
PRINTS:PR00881 Uniprot:Q3B8S0
Length = 128
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>UNIPROTKB|E2RRM7 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074840 OMA:QASNYKQ InterPro:IPR018492
PRINTS:PR00881 EMBL:AAEX03007292 UniGene:Cfa.9295
ProteinModelPortal:E2RRM7 PRIDE:E2RRM7 Ensembl:ENSCAFT00000001595
NextBio:20850489 Uniprot:E2RRM7
Length = 128
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>UNIPROTKB|J9P8E9 [details] [associations]
symbol:LOC609886 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074840 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 EMBL:AAEX03026883 RefSeq:XP_852208.2
Ensembl:ENSCAFT00000029620 GeneID:609886 KEGG:cfa:609886
OMA:ANEGIRL Uniprot:J9P8E9
Length = 128
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAKPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>UNIPROTKB|B1AHD1 [details] [associations]
symbol:NHP2L1 "NHP2-like protein 1" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0042254 GO:GO:0003723 GO:GO:0030529 EMBL:Z83840
HOGENOM:HOG000055226 HOVERGEN:HBG000328 OMA:QASNYKQ
OrthoDB:EOG4M91T0 InterPro:IPR018492 PRINTS:PR00881
UniGene:Hs.182255 HGNC:HGNC:7819 ChiTaRS:NHP2L1 IPI:IPI00893746
SMR:B1AHD1 STRING:B1AHD1 Ensembl:ENST00000402458 Uniprot:B1AHD1
Length = 132
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 60 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 119
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 120 IQSIQQSIERLLV 132
>UNIPROTKB|P55769 [details] [associations]
symbol:NHP2L1 "NHP2-like protein 1" species:9606 "Homo
sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005730 "nucleolus" evidence=TAS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0030515 "snoRNA binding" evidence=IDA] Reactome:REACT_71
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005654
Reactome:REACT_1675 GO:GO:0005681 GO:GO:0042254 GO:GO:0003723
GO:GO:0000398 EMBL:Z83840 GO:GO:0031428 CTD:4809 eggNOG:COG1358
HOGENOM:HOG000055226 HOVERGEN:HBG000328 KO:K12845 OrthoDB:EOG4M91T0
InterPro:IPR018492 PRINTS:PR00881 EMBL:D50420 EMBL:AF155235
EMBL:AF091076 EMBL:CR456531 EMBL:BC005358 EMBL:BC019282
IPI:IPI00026167 RefSeq:NP_001003796.1 RefSeq:NP_004999.1
UniGene:Hs.182255 PDB:1E7K PDB:2JNB PDB:2OZB PDB:3SIU PDB:3SIV
PDBsum:1E7K PDBsum:2JNB PDBsum:2OZB PDBsum:3SIU PDBsum:3SIV
ProteinModelPortal:P55769 SMR:P55769 IntAct:P55769
MINT:MINT-1382515 STRING:P55769 PhosphoSite:P55769 DMDM:2500345
SWISS-2DPAGE:P55769 PaxDb:P55769 PeptideAtlas:P55769 PRIDE:P55769
DNASU:4809 Ensembl:ENST00000215956 Ensembl:ENST00000355257
Ensembl:ENST00000401959 GeneID:4809 KEGG:hsa:4809 UCSC:uc003bat.3
GeneCards:GC22M042069 HGNC:HGNC:7819 HPA:HPA029199 MIM:601304
MIM:601876 neXtProt:NX_P55769 PharmGKB:PA31621 PhylomeDB:P55769
ChiTaRS:NHP2L1 EvolutionaryTrace:P55769 GenomeRNAi:4809
NextBio:18532 ArrayExpress:P55769 Bgee:P55769 CleanEx:HS_NHP2L1
Genevestigator:P55769 GermOnline:ENSG00000100138 Uniprot:P55769
Length = 128
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>UNIPROTKB|F2Z5V3 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030515 "snoRNA binding" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0030515 GO:GO:0042254 GO:GO:0030529 CTD:4809
GeneTree:ENSGT00550000074840 KO:K12845 OMA:QASNYKQ
InterPro:IPR018492 PRINTS:PR00881 EMBL:CU633382
RefSeq:NP_001177155.1 RefSeq:NP_001177156.1 UniGene:Ssc.21604
SMR:F2Z5V3 Ensembl:ENSSSCT00000000064 Ensembl:ENSSSCT00000023171
GeneID:100155420 KEGG:ssc:100155420 Uniprot:F2Z5V3
Length = 128
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>RGD|1303103 [details] [associations]
symbol:Nhp2l1 "NHP2 non-histone chromosome protein 2-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0007338 "single fertilization"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=ISO] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 RGD:1303103
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0042254 GO:GO:0003723 CTD:4809 eggNOG:COG1358
GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226
HOVERGEN:HBG000328 KO:K12845 OMA:QASNYKQ OrthoDB:EOG4M91T0
InterPro:IPR018492 PRINTS:PR00881 EMBL:BC058493 EMBL:H35080
IPI:IPI00191895 RefSeq:NP_997680.1 RefSeq:XP_003749200.1
RefSeq:XP_003753481.1 UniGene:Rn.1293 ProteinModelPortal:P55770
SMR:P55770 STRING:P55770 PRIDE:P55770 Ensembl:ENSRNOT00000009152
Ensembl:ENSRNOT00000030108 GeneID:100359574 GeneID:300092
KEGG:rno:100359574 KEGG:rno:300092 UCSC:RGD:1303103
InParanoid:P55770 NextBio:646327 Genevestigator:P55770
GermOnline:ENSRNOG00000006762 GermOnline:ENSRNOG00000025154
Uniprot:P55770
Length = 128
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>FB|FBgn0015393 [details] [associations]
symbol:hoip "hoi-polloi" species:7227 "Drosophila
melanogaster" [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=TAS] [GO:0003729
"mRNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
EMBL:AE014134 GO:GO:0007422 GO:GO:0042254 GO:GO:0003723
GO:GO:0071011 GO:GO:0000398 GO:GO:0030532 eggNOG:COG1358
GeneTree:ENSGT00550000074840 KO:K12845 OMA:QASNYKQ
InterPro:IPR018492 PRINTS:PR00881 EMBL:AF208396 RefSeq:NP_524714.1
UniGene:Dm.20299 ProteinModelPortal:Q9U3Z7 SMR:Q9U3Z7
DIP:DIP-21473N IntAct:Q9U3Z7 MINT:MINT-966432 STRING:Q9U3Z7
PaxDb:Q9U3Z7 PRIDE:Q9U3Z7 EnsemblMetazoa:FBtr0079846 GeneID:44173
KEGG:dme:Dmel_CG3949 UCSC:CG3949-RA CTD:44173 FlyBase:FBgn0015393
InParanoid:Q9U3Z7 OrthoDB:EOG46WWRZ PhylomeDB:Q9U3Z7
GenomeRNAi:44173 NextBio:836941 Bgee:Q9U3Z7 GermOnline:CG3949
Uniprot:Q9U3Z7
Length = 127
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 41/55 (74%), Positives = 49/55 (89%)
Query: 19 EDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQIQQLKDAIEKLLI 73
EDKNVPYVFV SKQALGRACGV+RP+VACSVT+NE SQLK+QI ++ IE+LL+
Sbjct: 73 EDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIERLLV 127
>SGD|S000000752 [details] [associations]
symbol:SNU13 "RNA binding protein" species:4932
"Saccharomyces cerevisiae" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP;IPI] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0031428 "box C/D snoRNP complex" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS;IMP;IDA;IPI] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0032040
"small-subunit processome" evidence=IDA] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082 SGD:S000000752
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005681 GO:GO:0003723
EMBL:BK006939 GO:GO:0000398 EMBL:U18530 GO:GO:0046540 GO:GO:0032040
GO:GO:0000462 GO:GO:0031428 eggNOG:COG1358
GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 OrthoDB:EOG4VQDZT
EMBL:AY558377 PIR:S50433 RefSeq:NP_010888.1 PDB:1ZWZ PDB:2ALE
PDBsum:1ZWZ PDBsum:2ALE ProteinModelPortal:P39990 SMR:P39990
DIP:DIP-2870N IntAct:P39990 MINT:MINT-627070 STRING:P39990
PaxDb:P39990 PeptideAtlas:P39990 EnsemblFungi:YEL026W GeneID:856687
KEGG:sce:YEL026W CYGD:YEL026w EvolutionaryTrace:P39990
NextBio:982724 Genevestigator:P39990 GermOnline:YEL026W
Uniprot:P39990
Length = 126
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFVPS+ ALGRACGV+RPV+A S+T+N+AS +KTQ
Sbjct: 54 MAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKTQ 113
Query: 61 IQQLKDAIEKLLI 73
I +KD IE LLI
Sbjct: 114 IYAVKDKIETLLI 126
>ZFIN|ZDB-GENE-030131-9670 [details] [associations]
symbol:nhp2l1b "NHP2 non-histone chromosome
protein 2-like 1b (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
ZFIN:ZDB-GENE-030131-9670 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0030529 eggNOG:COG1358 GeneTree:ENSGT00550000074840
HOGENOM:HOG000055226 HOVERGEN:HBG000328 KO:K12845 OMA:QASNYKQ
OrthoDB:EOG4M91T0 InterPro:IPR018492 PRINTS:PR00881 HSSP:P55769
EMBL:CU104767 EMBL:BC046034 IPI:IPI00497597 RefSeq:NP_955829.1
UniGene:Dr.106039 SMR:Q7ZV23 STRING:Q7ZV23
Ensembl:ENSDART00000029133 GeneID:321114 KEGG:dre:321114 CTD:321114
InParanoid:Q7ZV23 NextBio:20807238 Uniprot:Q7ZV23
Length = 128
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 45/73 (61%), Positives = 51/73 (69%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRACGV+RPV+A SVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLKPQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ AIE+LL+
Sbjct: 116 IQSVQMAIERLLV 128
>ZFIN|ZDB-GENE-040426-879 [details] [associations]
symbol:nhp2l1a "NHP2 non-histone chromosome protein
2-like 1a (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003723
"RNA binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 ZFIN:ZDB-GENE-040426-879
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
eggNOG:COG1358 GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226
HOVERGEN:HBG000328 KO:K12845 OrthoDB:EOG4M91T0 InterPro:IPR018492
PRINTS:PR00881 HSSP:P55769 OMA:ANEGIRL EMBL:CT583687 EMBL:BC050495
EMBL:BC066453 IPI:IPI00492489 RefSeq:NP_956606.1 UniGene:Dr.77772
SMR:Q7ZU93 STRING:Q7ZU93 Ensembl:ENSDART00000093031 GeneID:393282
KEGG:dre:393282 CTD:393282 InParanoid:Q7ZU93 NextBio:20814339
Uniprot:Q7ZU93
Length = 128
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 45/73 (61%), Positives = 51/73 (69%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRACGV+RPV+A SVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLKPQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ AIE+LL+
Sbjct: 116 IQSVQMAIERLLV 128
>UNIPROTKB|G4MRY0 [details] [associations]
symbol:MGG_02467 "Ribonucleoprotein-associated protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
EMBL:CM001231 GO:GO:0043581 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_003709261.1 ProteinModelPortal:G4MRY0
SMR:G4MRY0 EnsemblFungi:MGG_02467T0 GeneID:2681564
KEGG:mgr:MGG_02467 Uniprot:G4MRY0
Length = 126
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 43/73 (58%), Positives = 52/73 (71%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+AAD AEDKNVPYVFVPSK ALGRACGV+R V+A S+TSNEAS L+ Q
Sbjct: 54 LAADCEPLAILLHIPLLAEDKNVPYVFVPSKIALGRACGVSRAVIAASITSNEASDLQGQ 113
Query: 61 IQQLKDAIEKLLI 73
I+ L+D +E+L I
Sbjct: 114 IRTLRDKVERLAI 126
>RGD|1566078 [details] [associations]
symbol:RGD1566078 "similar to NHP2-like protein 1 (High mobility
group-like nuclear protein 2 homolog 1) (Sperm specific antigen 1)"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
RGD:1566078 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074840 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_001053559.1 RefSeq:XP_343838.3
Ensembl:ENSRNOT00000013187 GeneID:363514 KEGG:rno:363514 CTD:363514
OMA:RISNAVD Uniprot:H7C5X3
Length = 128
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/73 (60%), Positives = 51/73 (69%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EDKNVPYVFV SKQALGRA GV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVHSKQALGRARGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIEQLLV 128
>ASPGD|ASPL0000057404 [details] [associations]
symbol:AN1319 species:162425 "Emericella nidulans"
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0031428
"box C/D snoRNP complex" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
EMBL:BN001308 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
EMBL:AACD01000018 eggNOG:COG1358 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 OrthoDB:EOG4VQDZT
RefSeq:XP_658923.1 ProteinModelPortal:Q5BDR1 SMR:Q5BDR1
STRING:Q5BDR1 EnsemblFungi:CADANIAT00001295 GeneID:2877096
KEGG:ani:AN1319.2 Uniprot:Q5BDR1
Length = 126
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 40/73 (54%), Positives = 51/73 (69%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+AADT EDKNVPYV+VPSK ALGRA GV+RPV+A S+T+NEAS L Q
Sbjct: 54 LAADTTPLPIILHLPLLCEDKNVPYVYVPSKLALGRATGVSRPVIAASITTNEASDLMPQ 113
Query: 61 IQQLKDAIEKLLI 73
I+ +K +E+L+I
Sbjct: 114 IRAIKVQVERLMI 126
>DICTYBASE|DDB_G0282243 [details] [associations]
symbol:nhp2l1 "non-histone chromosome protein 2-like
1" species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA;ISS] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 dictyBase:DDB_G0282243 InterPro:IPR004038
Pfam:PF01248 GO:GO:0005730 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0042254 GO:GO:0003723 EMBL:AAFI02000046
eggNOG:COG1358 KO:K12845 OMA:QASNYKQ InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_640305.1 HSSP:P55769
ProteinModelPortal:Q54ST0 SMR:Q54ST0 STRING:Q54ST0 PRIDE:Q54ST0
EnsemblProtists:DDB0233512 GeneID:8623481 KEGG:ddi:DDB_G0282243
Uniprot:Q54ST0
Length = 129
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+AAD EDKN+PYVFV SK LGRAC V+RPVVAC+VT ++ SQLK+Q
Sbjct: 56 LAADAEPLEILLHIPLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTVDDKSQLKSQ 115
Query: 61 IQQLKDAIEKLLI 73
I +KD++++L I
Sbjct: 116 ITNVKDSLDRLWI 128
>GENEDB_PFALCIPARUM|PF11_0250 [details] [associations]
symbol:PF11_0250 "high mobility group-like
protein NHP2, putative" species:5833 "Plasmodium falciparum"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005634 GO:GO:0005730
GO:GO:0003723 EMBL:AE014186 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 HSSP:P55769
RefSeq:XP_001347921.1 ProteinModelPortal:Q8IIC4 SMR:Q8IIC4
IntAct:Q8IIC4 MINT:MINT-1604866 PRIDE:Q8IIC4
EnsemblProtists:PF11_0250:mRNA GeneID:810797 KEGG:pfa:PF11_0250
EuPathDB:PlasmoDB:PF3D7_1123900 ProtClustDB:CLSZ2432250
Uniprot:Q8IIC4
Length = 145
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 36/73 (49%), Positives = 48/73 (65%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+AAD EDKN PYV+V SK ALGRACG++R V+A S+ + + S L+TQ
Sbjct: 73 LAADAKPLEIISHIPLVCEDKNTPYVYVRSKMALGRACGISRSVIATSIVTKDGSPLETQ 132
Query: 61 IQQLKDAIEKLLI 73
I +LKD IE++LI
Sbjct: 133 ITELKDLIEQMLI 145
>UNIPROTKB|Q8IIC4 [details] [associations]
symbol:PF11_0250 "High mobility group-like protein NHP2,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR002415 PRINTS:PR00883 InterPro:IPR004038
Pfam:PF01248 GO:GO:0005634 GO:GO:0005730 GO:GO:0003723
EMBL:AE014186 HOGENOM:HOG000055226 KO:K12845 OMA:QASNYKQ
InterPro:IPR018492 PRINTS:PR00881 HSSP:P55769 RefSeq:XP_001347921.1
ProteinModelPortal:Q8IIC4 SMR:Q8IIC4 IntAct:Q8IIC4
MINT:MINT-1604866 PRIDE:Q8IIC4 EnsemblProtists:PF11_0250:mRNA
GeneID:810797 KEGG:pfa:PF11_0250 EuPathDB:PlasmoDB:PF3D7_1123900
ProtClustDB:CLSZ2432250 Uniprot:Q8IIC4
Length = 145
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 36/73 (49%), Positives = 48/73 (65%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+AAD EDKN PYV+V SK ALGRACG++R V+A S+ + + S L+TQ
Sbjct: 73 LAADAKPLEIISHIPLVCEDKNTPYVYVRSKMALGRACGISRSVIATSIVTKDGSPLETQ 132
Query: 61 IQQLKDAIEKLLI 73
I +LKD IE++LI
Sbjct: 133 ITELKDLIEQMLI 145
>UNIPROTKB|J9NTQ4 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
GeneTree:ENSGT00550000074840 InterPro:IPR018492 PRINTS:PR00881
Ensembl:ENSCAFT00000037180 Uniprot:J9NTQ4
Length = 126
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 19 EDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQIQQLKDAIEKLLI 73
E+KNVPYVFV SKQALGRACGV+ PV+AC VT SQ K QIQ ++ +IE+L +
Sbjct: 72 EEKNVPYVFVRSKQALGRACGVSGPVLACPVTIQGGSQPKPQIQSIQQSIERLFV 126
>UNIPROTKB|Q5E950 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9913 "Bos taurus" [GO:0015030 "Cajal body" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002415 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
GO:GO:0030529 GO:GO:0015030 GO:GO:0006364 eggNOG:COG1358
HOVERGEN:HBG000328 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000055227 KO:K11129 EMBL:BT021070 EMBL:BC103161
IPI:IPI00698988 RefSeq:NP_001015626.1 UniGene:Bt.12966
ProteinModelPortal:Q5E950 STRING:Q5E950 PRIDE:Q5E950
Ensembl:ENSBTAT00000008363 GeneID:520891 KEGG:bta:520891 CTD:55651
GeneTree:ENSGT00550000074939 InParanoid:Q5E950 OMA:HLPAVCE
OrthoDB:EOG4W3SP7 NextBio:20873195 Uniprot:Q5E950
Length = 153
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT ED+N+PYV++PSK LG A G RP V +E Q
Sbjct: 81 LAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
>UNIPROTKB|E2QYZ9 [details] [associations]
symbol:NHP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
InterPro:IPR018492 PRINTS:PR00881 KO:K11129 CTD:55651
GeneTree:ENSGT00550000074939 OMA:HLPAVCE EMBL:AAEX03007697
EMBL:AAEX03007698 RefSeq:XP_531874.1 Ensembl:ENSCAFT00000000376
GeneID:474644 KEGG:cfa:474644 NextBio:20850627 Uniprot:E2QYZ9
Length = 153
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT ED+N+PYV++PSK LG A G RP V +E Q
Sbjct: 81 LAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
>UNIPROTKB|Q9NX24 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9606 "Homo sapiens" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0031118 "rRNA pseudouridine synthesis"
evidence=ISS] InterPro:IPR002415 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0030515
GO:GO:0015030 GO:GO:0031118 Orphanet:1775 GO:GO:0005732
eggNOG:COG1358 HOVERGEN:HBG000328 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000055227 KO:K11129 CTD:55651 OMA:HLPAVCE
OrthoDB:EOG4W3SP7 EMBL:AJ293309 EMBL:AF401219 EMBL:AF161404
EMBL:AK000486 EMBL:CR457238 EMBL:AC136632 EMBL:BC000009
EMBL:BC006387 IPI:IPI00041325 RefSeq:NP_001030005.1
RefSeq:NP_060308.1 UniGene:Hs.728908 ProteinModelPortal:Q9NX24
SMR:Q9NX24 IntAct:Q9NX24 STRING:Q9NX24 PhosphoSite:Q9NX24
DMDM:68565945 SWISS-2DPAGE:Q9NX24 PaxDb:Q9NX24 PeptideAtlas:Q9NX24
PRIDE:Q9NX24 Ensembl:ENST00000274606 GeneID:55651 KEGG:hsa:55651
UCSC:uc003mir.2 GeneCards:GC05M177510 HGNC:HGNC:14377 HPA:HPA044171
MIM:606470 MIM:613987 neXtProt:NX_Q9NX24 PharmGKB:PA164723898
InParanoid:Q9NX24 PhylomeDB:Q9NX24 ChiTaRS:NHP2 GenomeRNAi:55651
NextBio:60350 ArrayExpress:Q9NX24 Bgee:Q9NX24 CleanEx:HS_NHP2
Genevestigator:Q9NX24 GermOnline:ENSG00000145912 Uniprot:Q9NX24
Length = 153
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT ED+N+PYV++PSK LG A G RP V +E Q
Sbjct: 81 LAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
>UNIPROTKB|F1S3E3 [details] [associations]
symbol:NHP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
InterPro:IPR018492 PRINTS:PR00881 GeneTree:ENSGT00550000074939
OMA:HLPAVCE EMBL:CU914278 Ensembl:ENSSSCT00000015328 Uniprot:F1S3E3
Length = 153
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT ED+N+PYV++PSK LG A G RP V +E Q
Sbjct: 81 LAGDTLPVEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
>MGI|MGI:1098547 [details] [associations]
symbol:Nhp2 "NHP2 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR002415
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
MGI:MGI:1098547 GO:GO:0005730 GO:GO:0030515 GO:GO:0015030
GO:GO:0031118 GO:GO:0005732 eggNOG:COG1358 HOVERGEN:HBG000328
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000055227 KO:K11129
CTD:55651 GeneTree:ENSGT00550000074939 OMA:HLPAVCE
OrthoDB:EOG4W3SP7 EMBL:AK007340 EMBL:AK008766 EMBL:AK019134
EMBL:BC024944 IPI:IPI00133550 RefSeq:NP_080907.1 UniGene:Mm.28203
ProteinModelPortal:Q9CRB2 SMR:Q9CRB2 STRING:Q9CRB2
PhosphoSite:Q9CRB2 PaxDb:Q9CRB2 PRIDE:Q9CRB2
Ensembl:ENSMUST00000127405 GeneID:52530 KEGG:mmu:52530
InParanoid:Q9CRB2 NextBio:309089 Bgee:Q9CRB2 Genevestigator:Q9CRB2
GermOnline:ENSMUSG00000001056 Uniprot:Q9CRB2
Length = 153
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT ED+N+PYV++PSK LG A G RP V +E Q
Sbjct: 81 LAGDTLPIEVYCHLPVLCEDQNLPYVYIPSKTDLGAATGSKRPTCVIMVKPHEEYQ 136
>SGD|S000002367 [details] [associations]
symbol:NHP2 "Protein related to mammalian high mobility group
(HMG) proteins" species:4932 "Saccharomyces cerevisiae" [GO:0000469
"cleavage involved in rRNA processing" evidence=IMP] [GO:0031118
"rRNA pseudouridine synthesis" evidence=IMP] [GO:0031120 "snRNA
pseudouridine synthesis" evidence=IMP;IDA] [GO:0030515 "snoRNA
binding" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031429 "box H/ACA snoRNP
complex" evidence=IPI] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 SGD:S000002367 InterPro:IPR004038
Pfam:PF01248 GO:GO:0030515 EMBL:BK006938 EMBL:X99000 GO:GO:0031429
GO:GO:0031118 GO:GO:0031120 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000055227 KO:K11129
GeneTree:ENSGT00550000074939 OMA:HLPAVCE OrthoDB:EOG473T1W
EMBL:X57714 EMBL:Z74256 PIR:S67767 RefSeq:NP_010073.2 PDB:2LBW
PDB:2LBX PDBsum:2LBW PDBsum:2LBX ProteinModelPortal:P32495
SMR:P32495 DIP:DIP-5134N IntAct:P32495 MINT:MINT-501968
STRING:P32495 PaxDb:P32495 PeptideAtlas:P32495 EnsemblFungi:YDL208W
GeneID:851319 KEGG:sce:YDL208W CYGD:YDL208w
EvolutionaryTrace:P32495 NextBio:968357 Genevestigator:P32495
GermOnline:YDL208W GO:GO:0000469 Uniprot:P32495
Length = 156
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 19 EDKNVPYVFVPSKQALGRACGVTRP--VVACSVTSNEASQLKTQIQQLKDAIEKLL 72
ED +VPY+F+PSKQ LG A RP VV SN+ K + ++ K++ +++
Sbjct: 95 EDHSVPYIFIPSKQDLGAAGATKRPTSVVFIVPGSNKKKDGKNKEEEYKESFNEVV 150
>UNIPROTKB|Q5RC65 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9601 "Pongo abelii" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0031118 "rRNA pseudouridine synthesis"
evidence=ISS] InterPro:IPR002415 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0030515
GO:GO:0015030 GO:GO:0031118 GO:GO:0005732 HOVERGEN:HBG000328
InterPro:IPR018492 PRINTS:PR00881 KO:K11129 CTD:55651
GeneTree:ENSGT00550000074939 OMA:HLPAVCE OrthoDB:EOG4W3SP7
EMBL:CR858415 RefSeq:NP_001125348.1 UniGene:Pab.14448
ProteinModelPortal:Q5RC65 PRIDE:Q5RC65 Ensembl:ENSPPYT00000018740
GeneID:100172250 KEGG:pon:100172250 InParanoid:Q5RC65
Uniprot:Q5RC65
Length = 153
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT ED+N+PYV++PSK LG A G RP V ++ Q
Sbjct: 81 LAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHDEYQ 136
>RGD|1309435 [details] [associations]
symbol:Nhp2 "NHP2 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 RGD:1309435 GO:GO:0005730
GO:GO:0003723 EMBL:CH473948 InterPro:IPR018492 PRINTS:PR00881
KO:K11129 CTD:55651 GeneTree:ENSGT00550000074939 OrthoDB:EOG4W3SP7
EMBL:AC105470 IPI:IPI00952476 RefSeq:NP_001099249.1 UniGene:Rn.4216
Ensembl:ENSRNOT00000064984 GeneID:287273 KEGG:rno:287273
UCSC:RGD:1309435 NextBio:625772 Uniprot:D3ZVC6
Length = 121
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT ED+N+PYV++PSK LG A G RP V +E Q
Sbjct: 49 LAGDTLPIEVYCHLPVMCEDQNLPYVYIPSKTDLGAATGSKRPTCVIMVKPHEDYQ 104
>FB|FBgn0029148 [details] [associations]
symbol:NHP2 "NHP2" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=NAS] [GO:0031118 "rRNA
pseudouridine synthesis" evidence=ISS] [GO:0030559 "rRNA
pseudouridylation guide activity" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0006364
"rRNA processing" evidence=ISS] [GO:0030515 "snoRNA binding"
evidence=ISS] PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
EMBL:AE014296 GO:GO:0005730 GO:GO:0030515 GO:GO:0031118
GO:GO:0005732 eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
KO:K11129 CTD:55651 GeneTree:ENSGT00550000074939 OMA:HLPAVCE
EMBL:AF217228 EMBL:BT023752 RefSeq:NP_651965.1 UniGene:Dm.7234
ProteinModelPortal:Q9V3U2 SMR:Q9V3U2 IntAct:Q9V3U2 MINT:MINT-306292
STRING:Q9V3U2 PaxDb:Q9V3U2 PRIDE:Q9V3U2 EnsemblMetazoa:FBtr0075698
EnsemblMetazoa:FBtr0333076 GeneID:44005 KEGG:dme:Dmel_CG5258
UCSC:CG5258-RA FlyBase:FBgn0029148 InParanoid:Q9V3U2
OrthoDB:EOG408KRC PhylomeDB:Q9V3U2 GenomeRNAi:44005 NextBio:836568
Bgee:Q9V3U2 GermOnline:CG5258 Uniprot:Q9V3U2
Length = 160
Score = 91 (37.1 bits), Expect = 0.00018, P = 0.00018
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 19 EDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQIQQLKDAIEKLLI 73
E+K +PY + PS+ LG A GV R VA V NE + K ++K+ + L I
Sbjct: 106 EEKGIPYTYTPSRADLGAAMGVKRGTVALLVRQNE--EYKDLYDEVKEELSALNI 158
>TAIR|locus:2181514 [details] [associations]
symbol:AT5G08180 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0001510
"RNA methylation" evidence=RCA] [GO:0009165 "nucleotide
biosynthetic process" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] InterPro:IPR002415 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0030515 EMBL:AL357612
GO:GO:0031118 GO:GO:0005732 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 EMBL:AY050477 EMBL:AF378885 IPI:IPI00539022
PIR:T50503 RefSeq:NP_001190260.1 RefSeq:NP_196435.1 UniGene:At.5453
ProteinModelPortal:Q9LEY9 SMR:Q9LEY9 STRING:Q9LEY9 PaxDb:Q9LEY9
PRIDE:Q9LEY9 EnsemblPlants:AT5G08180.1 EnsemblPlants:AT5G08180.2
GeneID:830714 KEGG:ath:AT5G08180 TAIR:At5g08180
HOGENOM:HOG000055227 InParanoid:Q9LEY9 KO:K11129 OMA:TCCVLVM
PhylomeDB:Q9LEY9 ProtClustDB:CLSN2687267 Genevestigator:Q9LEY9
GermOnline:AT5G08180 Uniprot:Q9LEY9
Length = 156
Score = 90 (36.7 bits), Expect = 0.00022, P = 0.00022
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 19 EDKNVPYVFVPSKQALGRACGVTRPVVACSV---------TSNEASQLKTQIQQLKDAIE 69
E+ VPYV+VPSK+ L +A RP V T+ E ++LKT +Q+ D I+
Sbjct: 90 EEAGVPYVYVPSKEDLAQAGATKRPTCCVLVMLKPAKGDLTAEELAKLKTDYEQVSDDIK 149
Query: 70 KL 71
+L
Sbjct: 150 EL 151
>UNIPROTKB|Q8I7X7 [details] [associations]
symbol:Q8I7X7 "H/ACA ribonucleoprotein complex subunit
2-like protein" species:7741 "Branchiostoma belcheri" [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0031118 "rRNA
pseudouridine synthesis" evidence=ISS] InterPro:IPR002415
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0030515 GO:GO:0031118 GO:GO:0005732
HOVERGEN:HBG000328 InterPro:IPR018492 PRINTS:PR00881 EMBL:AY168452
EMBL:AY043319 ProteinModelPortal:Q8I7X7 Uniprot:Q8I7X7
Length = 159
Score = 90 (36.7 bits), Expect = 0.00024, P = 0.00024
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT ED +PY +VP+KQ LG A G RP + NE+ Q
Sbjct: 87 IAGDTTPIEVYCHLPVVCEDAKIPYCYVPAKQDLGEAAGSKRPTCCVLLKPNESYQ 142
>UNIPROTKB|F1NNP9 [details] [associations]
symbol:NHP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
InterPro:IPR018492 PRINTS:PR00881 GeneTree:ENSGT00550000074939
OMA:HLPAVCE EMBL:AADN02028772 IPI:IPI00583712
Ensembl:ENSGALT00000005042 Uniprot:F1NNP9
Length = 158
Score = 88 (36.0 bits), Expect = 0.00040, P = 0.00040
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT ED+N+PY +VPSK LG A G RP + +E Q
Sbjct: 86 LAGDTLPIDVYCHIPIMCEDRNLPYAYVPSKSDLGAAAGSKRPTCVILLKPHEEYQ 141
>UNIPROTKB|Q6XIP0 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2-like
protein" species:7245 "Drosophila yakuba" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0030515
"snoRNA binding" evidence=ISS] [GO:0031118 "rRNA pseudouridine
synthesis" evidence=ISS] PROSITE:PS01082 InterPro:IPR004038
Pfam:PF01248 GO:GO:0005730 GO:GO:0030515 GO:GO:0031118
EMBL:CM000159 GO:GO:0005732 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 KO:K11129 OrthoDB:EOG408KRC EMBL:AY231789
RefSeq:XP_002094819.1 ProteinModelPortal:Q6XIP0 STRING:Q6XIP0
EnsemblMetazoa:FBtr0266518 GeneID:6534135 KEGG:dya:Dyak_GE20000
FlyBase:FBgn0068118 Uniprot:Q6XIP0
Length = 160
Score = 88 (36.0 bits), Expect = 0.00042, P = 0.00042
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 19 EDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQIQQLKDAIEKLLI 73
E+K +PY + PS+ LG A GV R VA V N+ + K ++K+ + L I
Sbjct: 106 EEKGIPYAYTPSRADLGAAMGVKRGTVALLVRQND--EYKDLYDEVKEELSALNI 158
>POMBASE|SPAC1782.10c [details] [associations]
symbol:nhp2 "box H/ACA snoRNP complex subunit Nhp2"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0019843 "rRNA
binding" evidence=IC] [GO:0030515 "snoRNA binding" evidence=ISS]
[GO:0031118 "rRNA pseudouridine synthesis" evidence=IGI;ISS]
[GO:0031120 "snRNA pseudouridine synthesis" evidence=IGI]
[GO:0031429 "box H/ACA snoRNP complex" evidence=IGI] [GO:0034513
"box H/ACA snoRNA binding" evidence=IGI] InterPro:IPR002415
PRINTS:PR00883 PROSITE:PS01082 PomBase:SPAC1782.10c
InterPro:IPR004038 Pfam:PF01248 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0019843 GO:GO:0031429 GO:GO:0031118
GO:GO:0031120 GO:GO:0034513 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000055227 KO:K11129 OMA:TCCVLVM
EMBL:AJ010068 PIR:T43644 PIR:T50100 RefSeq:NP_594717.1
ProteinModelPortal:Q9P7H0 STRING:Q9P7H0 EnsemblFungi:SPAC1782.10c.1
GeneID:2542369 KEGG:spo:SPAC1782.10c OrthoDB:EOG473T1W
NextBio:20803428 Uniprot:Q9P7H0
Length = 154
Score = 87 (35.7 bits), Expect = 0.00048, P = 0.00048
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 19 EDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQIQQLKDAIEKLL 72
ED NVPY++ SK+ LG A RP + + +++++ K++ E+++
Sbjct: 93 EDNNVPYLYTVSKELLGEASNTKRPTSCVMIVPGGKKKDMSKVEEYKESYEEII 146
>UNIPROTKB|Q6NTV9 [details] [associations]
symbol:nhp2 "H/ACA ribonucleoprotein complex subunit 2-like
protein" species:8355 "Xenopus laevis" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0031118 "rRNA pseudouridine synthesis"
evidence=ISS] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0030515 GO:GO:0031118 GO:GO:0005732 HOVERGEN:HBG000328
InterPro:IPR018492 PRINTS:PR00881 KO:K11129 CTD:55651 EMBL:BC068845
RefSeq:NP_001084534.1 UniGene:Xl.44669 ProteinModelPortal:Q6NTV9
GeneID:414481 KEGG:xla:414481 Xenbase:XB-GENE-6252839
Uniprot:Q6NTV9
Length = 149
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 20/56 (35%), Positives = 25/56 (44%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
MA DT ED+ +PY +VPSK LG A G RP + +E Q
Sbjct: 77 MAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILIKPHEDYQ 132
>UNIPROTKB|Q6P8C4 [details] [associations]
symbol:nhp2 "H/ACA ribonucleoprotein complex subunit 2-like
protein" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0031118 "rRNA
pseudouridine synthesis" evidence=ISS] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0030515
GO:GO:0031118 GO:GO:0005732 eggNOG:COG1358 HOVERGEN:HBG000328
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000055227 KO:K11129
OMA:TCCVLVM CTD:55651 GeneTree:ENSGT00550000074939
OrthoDB:EOG4W3SP7 EMBL:BC061305 RefSeq:NP_988989.1 UniGene:Str.1896
ProteinModelPortal:Q6P8C4 STRING:Q6P8C4 Ensembl:ENSXETT00000014709
GeneID:394586 KEGG:xtr:394586 Xenbase:XB-GENE-973261
InParanoid:Q6P8C4 Bgee:Q6P8C4 Uniprot:Q6P8C4
Length = 149
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 20/56 (35%), Positives = 25/56 (44%)
Query: 1 MAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
MA DT ED+ +PY +VPSK LG A G RP + +E Q
Sbjct: 77 MAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILIKPHEDYQ 132
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.127 0.347 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 73 61 0.00091 102 3 10 23 0.37 28
29 0.39 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 507 (54 KB)
Total size of DFA: 93 KB (2068 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.03u 0.12s 10.15t Elapsed: 00:00:01
Total cpu time: 10.04u 0.12s 10.16t Elapsed: 00:00:01
Start: Fri May 10 05:34:28 2013 End: Fri May 10 05:34:29 2013