BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035100
(73 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6C0I0|SNU13_YARLI 13 kDa ribonucleoprotein-associated protein OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=SNU13 PE=3 SV=1
Length = 126
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 66/73 (90%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EP+EILLHLPLL EDKNVPY+FVPSK ALGRACGV+RPV++ SVTSN+ASQLK Q
Sbjct: 54 MAADAEPIEILLHLPLLCEDKNVPYIFVPSKVALGRACGVSRPVISASVTSNDASQLKDQ 113
Query: 61 IQQLKDAIEKLLI 73
I Q+KD IE+LLI
Sbjct: 114 IIQMKDKIERLLI 126
>sp|Q6BLQ3|SNU13_DEBHA 13 kDa ribonucleoprotein-associated protein OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=SNU13 PE=3 SV=1
Length = 126
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAADTEP+EILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPV+A SVT+NEAS +K Q
Sbjct: 54 MAADTEPIEILLHLPLLCEDKNVPYVFVPSKTALGRACGVSRPVIAASVTTNEASAMKNQ 113
Query: 61 IQQLKDAIEKLLI 73
I +KD IE LLI
Sbjct: 114 IYGIKDKIETLLI 126
>sp|Q5ANL6|SNU13_CANAL 13 kDa ribonucleoprotein-associated protein OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=SNU13 PE=3 SV=1
Length = 126
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAADTEP+EILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPV+A SVTSN+AS +K Q
Sbjct: 54 MAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASVTSNDASSIKNQ 113
Query: 61 IQQLKDAIEKLLI 73
I +KD IE LLI
Sbjct: 114 IYGIKDKIETLLI 126
>sp|Q5XH16|NH2L1_XENLA NHP2-like protein 1 OS=Xenopus laevis GN=nhp2l1 PE=2 SV=1
Length = 128
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EPLEI+LHLPLL EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKPQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ AIE+LL+
Sbjct: 116 IQSVQQAIERLLV 128
>sp|O74690|SNU13_SCHPO 13 kDa ribonucleoprotein-associated protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=snu13 PE=3 SV=1
Length = 125
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 65/73 (89%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAADTEP+EILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPV++ S+T+NEAS L Q
Sbjct: 53 MAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISASITTNEASDLLPQ 112
Query: 61 IQQLKDAIEKLLI 73
IQ +K AIEKLLI
Sbjct: 113 IQAIKLAIEKLLI 125
>sp|Q9U3Z7|NH2L1_DROME NHP2-like protein 1 homolog OS=Drosophila melanogaster GN=hoip PE=2
SV=1
Length = 127
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D EP+EILLHLPLL EDKNVPYVFV SKQALGRACGV+RP+VACSVT+NE SQLK+Q
Sbjct: 55 LAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQ 114
Query: 61 IQQLKDAIEKLLI 73
I ++ IE+LL+
Sbjct: 115 ITSIQQEIERLLV 127
>sp|Q6P8E9|NH2L1_XENTR NHP2-like protein 1 OS=Xenopus tropicalis GN=nhp2l1 PE=2 SV=1
Length = 128
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EPLEI+LHLPLL EDKNVPYVFV SKQALGRACGV+RPV+AC+VT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACAVTIKEGSQLKPQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ L+ +IE+LL+
Sbjct: 116 IQSLQQSIERLLV 128
>sp|Q4P0K3|SNU13_USTMA 13 kDa ribonucleoprotein-associated protein OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=SNU13 PE=3 SV=1
Length = 126
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 66/73 (90%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EP+EI+LHLPLL EDKNVPYVFVPSK ALGRACGV+RPVV+ SVT+NEA +L++Q
Sbjct: 54 MAADVEPIEIVLHLPLLCEDKNVPYVFVPSKTALGRACGVSRPVVSASVTTNEARELQSQ 113
Query: 61 IQQLKDAIEKLLI 73
IQ +K AIE+LLI
Sbjct: 114 IQTVKLAIERLLI 126
>sp|P39990|SNU13_YEAST 13 kDa ribonucleoprotein-associated protein OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SNU13 PE=1
SV=1
Length = 126
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EP+EILLHLPLL EDKNVPYVFVPS+ ALGRACGV+RPV+A S+T+N+AS +KTQ
Sbjct: 54 MAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKTQ 113
Query: 61 IQQLKDAIEKLLI 73
I +KD IE LLI
Sbjct: 114 IYAVKDKIETLLI 126
>sp|Q6CM69|SNU13_KLULA 13 kDa ribonucleoprotein-associated protein OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SNU13 PE=3 SV=1
Length = 126
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EP+EILLHLPLL EDKNVPYVFVPS+ ALGRACGV+RPV+A S+T+N+AS +K+Q
Sbjct: 54 MAADCEPIEILLHLPLLCEDKNVPYVFVPSRTALGRACGVSRPVIAASITTNDASAIKSQ 113
Query: 61 IQQLKDAIEKLLI 73
I +KD IE LLI
Sbjct: 114 IYAVKDKIETLLI 126
>sp|Q757T2|SNU13_ASHGO 13 kDa ribonucleoprotein-associated protein OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SNU13 PE=3 SV=1
Length = 127
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EP+EILLHLPLL EDKNVPYVFVPS+ ALGRACGV+RPV+A S+T+N+AS +K+Q
Sbjct: 55 MAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKSQ 114
Query: 61 IQQLKDAIEKLLI 73
I +KD IE LLI
Sbjct: 115 IYAVKDKIETLLI 127
>sp|P0CQ52|SNU13_CRYNJ 13 kDa ribonucleoprotein-associated protein OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=SNU13 PE=3 SV=1
Length = 127
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 63/73 (86%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
M AD EP+EI+LHLPLL EDKNVPYVF+PSK ALGRACGV+RPV+A SVT+NEA +L Q
Sbjct: 55 MTADVEPIEIVLHLPLLCEDKNVPYVFLPSKTALGRACGVSRPVIAASVTTNEARELNAQ 114
Query: 61 IQQLKDAIEKLLI 73
IQ +K+ IEKLLI
Sbjct: 115 IQAVKNEIEKLLI 127
>sp|P0CQ53|SNU13_CRYNB 13 kDa ribonucleoprotein-associated protein OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=SNU13 PE=3 SV=1
Length = 127
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 63/73 (86%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
M AD EP+EI+LHLPLL EDKNVPYVF+PSK ALGRACGV+RPV+A SVT+NEA +L Q
Sbjct: 55 MTADVEPIEIVLHLPLLCEDKNVPYVFLPSKTALGRACGVSRPVIAASVTTNEARELNAQ 114
Query: 61 IQQLKDAIEKLLI 73
IQ +K+ IEKLLI
Sbjct: 115 IQAVKNEIEKLLI 127
>sp|Q6FQV5|SNU13_CANGA 13 kDa ribonucleoprotein-associated protein OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SNU13 PE=3 SV=1
Length = 126
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 63/73 (86%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EP+EILLHLPLL EDKNVPYVFVPS+ ALGRACGV+RPV+A S+T+N+AS +K Q
Sbjct: 54 MAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKNQ 113
Query: 61 IQQLKDAIEKLLI 73
I +KD IE LLI
Sbjct: 114 IYAVKDKIETLLI 126
>sp|Q54ST0|NH2L1_DICDI NHP2-like protein 1 homolog OS=Dictyostelium discoideum
GN=DDB_G0282243 PE=3 SV=1
Length = 129
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 62/73 (84%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+AAD EPLEILLH+PLL EDKN+PYVFV SK LGRAC V+RPVVAC+VT ++ SQLK+Q
Sbjct: 56 LAADAEPLEILLHIPLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTVDDKSQLKSQ 115
Query: 61 IQQLKDAIEKLLI 73
I +KD++++L I
Sbjct: 116 ITNVKDSLDRLWI 128
>sp|P55770|NH2L1_RAT NHP2-like protein 1 OS=Rattus norvegicus GN=Nhp2l1 PE=2 SV=4
Length = 128
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EPLEI+LHLPLL EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>sp|Q9D0T1|NH2L1_MOUSE NHP2-like protein 1 OS=Mus musculus GN=Nhp2l1 PE=2 SV=4
Length = 128
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EPLEI+LHLPLL EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>sp|Q4R5C6|NH2L1_MACFA NHP2-like protein 1 OS=Macaca fascicularis GN=NHP2L1 PE=2 SV=1
Length = 128
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EPLEI+LHLPLL EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>sp|P55769|NH2L1_HUMAN NHP2-like protein 1 OS=Homo sapiens GN=NHP2L1 PE=1 SV=3
Length = 128
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EPLEI+LHLPLL EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>sp|Q3B8S0|NH2L1_BOVIN NHP2-like protein 1 OS=Bos taurus GN=NHP2L1 PE=2 SV=3
Length = 128
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 64/73 (87%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EPLEI+LHLPLL EDKNVPYVFV SKQALGRACGV+RPV+ACSVT E SQLK Q
Sbjct: 56 MAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ ++ +IE+LL+
Sbjct: 116 IQSIQQSIERLLV 128
>sp|Q21568|NH2L1_CAEEL NHP2-like protein 1 homolog OS=Caenorhabditis elegans GN=M28.5 PE=3
SV=1
Length = 128
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 65/73 (89%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
MAAD EPLEILLHLPLL EDKNVPYVFV SK ALGRACGVTRPV+A S+T NE SQLK+Q
Sbjct: 56 MAADAEPLEILLHLPLLCEDKNVPYVFVRSKAALGRACGVTRPVIAASITQNEGSQLKSQ 115
Query: 61 IQQLKDAIEKLLI 73
IQ++K+ +EKLLI
Sbjct: 116 IQKIKEDVEKLLI 128
>sp|Q971C9|RL7A_SULTO 50S ribosomal protein L7Ae OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl7ae PE=3 SV=1
Length = 126
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D +P EI+ HLPLL E+K +PYV+VPSK+ALG ACG+ V A S + + K
Sbjct: 53 IATDVQPEEIVAHLPLLCEEKKIPYVYVPSKKALGEACGLQ--VAAASAAIIDPGEAKDL 110
Query: 61 IQQLKDAIEKL 71
+ ++ +E+L
Sbjct: 111 LDEIVKRVEEL 121
>sp|Q9CRB2|NHP2_MOUSE H/ACA ribonucleoprotein complex subunit 2 OS=Mus musculus GN=Nhp2
PE=2 SV=1
Length = 153
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT P+E+ HLP+L ED+N+PYV++PSK LG A G RP V +E Q
Sbjct: 81 LAGDTLPIEVYCHLPVLCEDQNLPYVYIPSKTDLGAATGSKRPTCVIMVKPHEEYQ 136
>sp|Q9NX24|NHP2_HUMAN H/ACA ribonucleoprotein complex subunit 2 OS=Homo sapiens GN=NHP2
PE=1 SV=1
Length = 153
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT P+E+ HLP++ ED+N+PYV++PSK LG A G RP V +E Q
Sbjct: 81 LAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
>sp|Q5E950|NHP2_BOVIN H/ACA ribonucleoprotein complex subunit 2 OS=Bos taurus GN=NHP2
PE=2 SV=1
Length = 153
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT P+E+ HLP++ ED+N+PYV++PSK LG A G RP V +E Q
Sbjct: 81 LAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
>sp|O29494|RL7A_ARCFU 50S ribosomal protein L7Ae OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl7ae PE=1 SV=1
Length = 119
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D +P EI+ HLPLL E+KNVPY++V SK LGRA G+ P + ++ + +L+ +
Sbjct: 49 IAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEVPCASAAIINE--GELRKE 106
Query: 61 IQQLKDAIEKL 71
+ L + I+ L
Sbjct: 107 LGSLVEKIKGL 117
>sp|Q4J8P1|RL7A_SULAC 50S ribosomal protein L7Ae OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl7ae PE=3 SV=1
Length = 126
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D +P EI+ HLPLL E+K +PYV+VPSK++LG ACG+ V A SV + + K
Sbjct: 53 IAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKKSLGEACGLQ--VAAASVALMDPGEAKDL 110
Query: 61 IQQL 64
+ ++
Sbjct: 111 VDEI 114
>sp|Q9YAX7|RL7A_AERPE 50S ribosomal protein L7Ae OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl7ae
PE=1 SV=1
Length = 127
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D +P EI++HLPLL ++K +PYV+VPSK+ LG A G+ V A SV E +T
Sbjct: 53 IAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRLGEAAGIE--VAAASVAIIEPGDAETL 110
Query: 61 IQQLKDAIEKL 71
++++ + +++L
Sbjct: 111 VREIVEKVKEL 121
>sp|Q2NGM2|RL7A_METST 50S ribosomal protein L7Ae OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl7ae PE=3 SV=1
Length = 123
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVV-ACSVTSNEASQLKT 59
+A D EP EI+ HLP+LAE+K +PYV++P+K+ LG A G+ AC + + E +L
Sbjct: 53 IAEDIEPAEIVAHLPILAEEKEIPYVYLPTKEELGEAAGLNVGTASACIIDAGEGQELVD 112
Query: 60 QI 61
+I
Sbjct: 113 EI 114
>sp|Q8I7X7|NHP2_BRABE H/ACA ribonucleoprotein complex subunit 2-like protein
OS=Branchiostoma belcheri PE=2 SV=1
Length = 159
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT P+E+ HLP++ ED +PY +VP+KQ LG A G RP + NE+ Q
Sbjct: 87 IAGDTTPIEVYCHLPVVCEDAKIPYCYVPAKQDLGEAAGSKRPTCCVLLKPNESYQ 142
>sp|Q5RC65|NHP2_PONAB H/ACA ribonucleoprotein complex subunit 2 OS=Pongo abelii GN=NHP2
PE=2 SV=1
Length = 153
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
+A DT P+E+ HLP++ ED+N+PYV++PSK LG A G RP V ++ Q
Sbjct: 81 LAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHDEYQ 136
>sp|O26355|RL7A_METTH 50S ribosomal protein L7Ae OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl7ae PE=3 SV=2
Length = 123
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D EP EI+ HLPLLAE+K +PY+++P+K LG A G+ + ++ EA +
Sbjct: 53 IAEDVEPAEIVAHLPLLAEEKEIPYIYIPTKDELGAAAGLNVGTASSAIV--EAGDAEDL 110
Query: 61 IQQLKDAIEKL 71
I+++ + +E+L
Sbjct: 111 IKEIIEKVEEL 121
>sp|A2BK92|RL7A_HYPBU 50S ribosomal protein L7Ae OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGV-TRPVVACSVTSNEASQLKT 59
+A D +P EI+ HLPLL E+K +PYV+VPSK+ LG A G+ AC + EA L
Sbjct: 53 IAEDVDPPEIVAHLPLLCEEKKIPYVYVPSKKRLGEAAGIEVAAASACIIDPGEAKNLVE 112
Query: 60 QI 61
+I
Sbjct: 113 EI 114
>sp|P32495|NHP2_YEAST H/ACA ribonucleoprotein complex subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=NHP2 PE=1
SV=2
Length = 156
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRP--VVACSVTSNEASQLK 58
+A D P +++ H+P+L ED +VPY+F+PSKQ LG A RP VV SN+ K
Sbjct: 77 IAGDISPADVISHIPVLCEDHSVPYIFIPSKQDLGAAGATKRPTSVVFIVPGSNKKKDGK 136
Query: 59 TQIQQLKDAIEKLL 72
+ ++ K++ +++
Sbjct: 137 NKEEEYKESFNEVV 150
>sp|B8D6E8|RL7A_DESK1 50S ribosomal protein L7Ae OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D +P EI+ HLPLL ++K +PYV+VPSKQ LG+A G+ V A SV + K
Sbjct: 54 IAEDVDPPEIVAHLPLLCDEKKIPYVYVPSKQKLGQAAGIE--VSAASVAVIDVGGAKDL 111
Query: 61 IQQLKDAIEKL 71
I ++ +++++
Sbjct: 112 IDEIIKSVQQI 122
>sp|Q6P8C4|NHP2_XENTR H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus
tropicalis GN=nhp2 PE=2 SV=1
Length = 149
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
MA DT P+E+ H+P++ ED+ +PY +VPSK LG A G RP + +E Q
Sbjct: 77 MAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILIKPHEDYQ 132
>sp|Q6NTV9|NHP2_XENLA H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus
laevis GN=nhp2 PE=2 SV=1
Length = 149
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQ 56
MA DT P+E+ H+P++ ED+ +PY +VPSK LG A G RP + +E Q
Sbjct: 77 MAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILIKPHEDYQ 132
>sp|Q8ZTA5|RL7A_PYRAE 50S ribosomal protein L7Ae OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl7ae PE=3 SV=1
Length = 151
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D +P E++ HLPLL E+K VPYV+VPSK+ LG+A G+ V A + E Q +
Sbjct: 68 IAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLGKAAGIN--VSAAAAVVIEPGQAAGE 125
Query: 61 IQQLKDAIEKL 71
++ L I ++
Sbjct: 126 LEALVSKINEV 136
>sp|Q9LEY9|NHP2_ARATH H/ACA ribonucleoprotein complex subunit 2-like protein
OS=Arabidopsis thaliana GN=At5g08180 PE=1 SV=1
Length = 156
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSV---------TS 51
+A + P++++ HLP+L E+ VPYV+VPSK+ L +A RP V T+
Sbjct: 72 IAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCCVLVMLKPAKGDLTA 131
Query: 52 NEASQLKTQIQQLKDAIEKL 71
E ++LKT +Q+ D I++L
Sbjct: 132 EELAKLKTDYEQVSDDIKEL 151
>sp|B1Y9V4|RL7A_PYRNV 50S ribosomal protein L7Ae OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rpl7ae PE=3 SV=1
Length = 151
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D +P E++ HLPLL E+K VPYV+VPSK+ LG+A G+ V A + E Q +
Sbjct: 68 IAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLGKAAGIN--VSAAAAVVIEPGQAAGE 125
Query: 61 IQQL 64
++ L
Sbjct: 126 LEAL 129
>sp|P55858|RL7A_SULSO 50S ribosomal protein L7Ae OS=Sulfolobus solfataricus (strain
ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=rpl7ae PE=1
SV=2
Length = 127
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGV 40
+A D +P EI+ HLPLL ++K +PYV+V SK+ALG ACG+
Sbjct: 53 IAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGL 92
>sp|C3N8Q2|RL7A_SULIY 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGV 40
+A D +P EI+ HLPLL ++K +PYV+V SK+ALG ACG+
Sbjct: 53 IAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGL 92
>sp|C3NMR6|RL7A_SULIN 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGV 40
+A D +P EI+ HLPLL ++K +PYV+V SK+ALG ACG+
Sbjct: 53 IAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGL 92
>sp|C3MYY9|RL7A_SULIM 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGV 40
+A D +P EI+ HLPLL ++K +PYV+V SK+ALG ACG+
Sbjct: 53 IAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGL 92
>sp|C3MJN1|RL7A_SULIL 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGV 40
+A D +P EI+ HLPLL ++K +PYV+V SK+ALG ACG+
Sbjct: 53 IAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGL 92
>sp|C4KJ77|RL7A_SULIK 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGV 40
+A D +P EI+ HLPLL ++K +PYV+V SK+ALG ACG+
Sbjct: 53 IAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGL 92
>sp|C3N038|RL7A_SULIA 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
M.16.27) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGV 40
+A D +P EI+ HLPLL ++K +PYV+V SK+ALG ACG+
Sbjct: 53 IAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGL 92
>sp|A8A912|RL7A_IGNH4 50S ribosomal protein L7Ae OS=Ignicoccus hospitalis (strain KIN4/I
/ DSM 18386 / JCM 14125) GN=rpl7ae PE=3 SV=1
Length = 128
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEAS----- 55
+A D +P EI+ HLPLL E+K +PYV+VPSK+ LG A G+ A ++ A+
Sbjct: 54 IAEDVDPPEIVAHLPLLCEEKKIPYVYVPSKKKLGEAAGIEVQAAAAAIIDPGAAKDLVE 113
Query: 56 QLKTQIQQLK 65
++ +++Q+K
Sbjct: 114 EIIKEVEQIK 123
>sp|P12743|RL7A_HALMA 50S ribosomal protein L7Ae OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rpl7ae PE=1
SV=4
Length = 120
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D +P EI++H+P LA++K VP++FV + LG A G+ A +VT +A +
Sbjct: 51 VAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVT--DAGEADAD 108
Query: 61 IQQLKDAIEKL 71
++ + D +E+L
Sbjct: 109 VEDIADKVEEL 119
>sp|Q9P7H0|NHP2_SCHPO H/ACA ribonucleoprotein complex subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=nhp2 PE=1 SV=1
Length = 154
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%)
Query: 1 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVVACSVTSNEASQLKTQ 60
+A D P++++ H+P+L ED NVPY++ SK+ LG A RP + + ++
Sbjct: 75 LAGDISPMDVISHIPVLCEDNNVPYLYTVSKELLGEASNTKRPTSCVMIVPGGKKKDMSK 134
Query: 61 IQQLKDAIEKLL 72
+++ K++ E+++
Sbjct: 135 VEEYKESYEEII 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,636,434
Number of Sequences: 539616
Number of extensions: 703616
Number of successful extensions: 2520
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2411
Number of HSP's gapped (non-prelim): 116
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)