BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035101
(73 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2REX|A Chain A, Crystal Structure Of The Effector Domain Of Plxnb1 Bound
With Rnd1 Gtpase
pdb|2REX|C Chain C, Crystal Structure Of The Effector Domain Of Plxnb1 Bound
With Rnd1 Gtpase
Length = 121
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 31 AANVPKAIVLCQ-VEKAKEDMLNQLYSSV 58
A VP ++ C + +AKE ML+QLY V
Sbjct: 23 AQGVPVKVLDCDTISQAKEKMLDQLYKGV 51
>pdb|2JPH|A Chain A, Nmr Solution Structure Of The Rho Gtpase Binding Domain
Of Human Plexin-B1
Length = 123
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 31 AANVPKAIVLCQ-VEKAKEDMLNQLYSSV 58
A VP ++ C + +AKE ML+QLY V
Sbjct: 25 AQGVPVKVLDCDTISQAKEKMLDQLYKGV 53
>pdb|3SU8|X Chain X, Crystal Structure Of A Truncated Intracellular Domain Of
Plexin-B1 In Complex With Rac1
Length = 611
Score = 26.2 bits (56), Expect = 5.4, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 31 AANVPKAIVLCQ-VEKAKEDMLNQLYSSV 58
A VP ++ C + +AKE ML+QLY V
Sbjct: 240 AQGVPVKVLDCDTISQAKEKMLDQLYKGV 268
>pdb|3HM6|X Chain X, Crystal Structure Of The Cytoplasmic Domain Of Human
Plexin B1
Length = 644
Score = 25.8 bits (55), Expect = 5.7, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 31 AANVPKAIVLCQ-VEKAKEDMLNQLYSSV 58
A VP ++ C + +AKE ML+QLY V
Sbjct: 273 AQGVPVKVLDCDTISQAKEKMLDQLYKGV 301
>pdb|1Q2O|A Chain A, Bovine Endothelial Nitric Oxide Synthase N368d Mutant
Heme Domain Dimer With
L-N(Omega)-Nitroarginine-2,4-L-Diaminobutyramide Bound
pdb|1Q2O|B Chain B, Bovine Endothelial Nitric Oxide Synthase N368d Mutant
Heme Domain Dimer With
L-N(Omega)-Nitroarginine-2,4-L-Diaminobutyramide Bound
Length = 416
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 58 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 88
>pdb|1NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase
pdb|1NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase
pdb|2NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase Substrate Complex
pdb|2NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase Substrate Complex
pdb|3NSE|A Chain A, Bovine Enos, H4b-Free, Seitu Complex
pdb|3NSE|B Chain B, Bovine Enos, H4b-Free, Seitu Complex
pdb|4NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase, H4b-Free, L-Arg
Complex
pdb|4NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase, H4b-Free, L-Arg
Complex
pdb|1D1W|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 2- Aminothiazoline (h4b Bound)
pdb|1D1W|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 2- Aminothiazoline (h4b Bound)
pdb|1ED4|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Ipitu (H4b Free)
pdb|1ED4|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Ipitu (H4b Free)
pdb|9NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase,
Ethyl-Isoselenourea Complex
pdb|9NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase,
Ethyl-Isoselenourea Complex
pdb|1DMI|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 6s-H4b
pdb|1DMI|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 6s-H4b
pdb|1DMJ|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 5, 6-cyclic-tetrahydropteridine
pdb|1DMJ|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 5, 6-cyclic-tetrahydropteridine
pdb|1DMK|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 4- Amino-6-Phenyl-Tetrahydropteridine
pdb|1DMK|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 4- Amino-6-Phenyl-Tetrahydropteridine
pdb|1DM6|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With N- (4-Chlorophenyl)-N'-Hydroxyguanidine
(H4b Free)
pdb|1DM6|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With N- (4-Chlorophenyl)-N'-Hydroxyguanidine
(H4b Free)
pdb|1DM7|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Homoarginine (H4b Free)
pdb|1DM7|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Homoarginine (H4b Free)
pdb|1DM8|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 2,4-Triazole-Carboxamidine (H4b Bound)
pdb|1DM8|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 2,4-Triazole-Carboxamidine (H4b Bound)
pdb|1ED5|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Nna(H4b Free)
pdb|1ED5|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Nna(H4b Free)
pdb|1ED6|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Nio (H4b Free)
pdb|1ED6|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Nio (H4b Free)
pdb|1D1V|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With S- Ethyl-N-Phenyl-Isothiourea (H4b Bound)
pdb|1D1V|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With S- Ethyl-N-Phenyl-Isothiourea (H4b Bound)
pdb|1D1X|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 4-Pbitu (H4b Bound)
pdb|1D1X|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 4-Pbitu (H4b Bound)
pdb|1D1Y|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 3-Pbitu (H4b Free)
pdb|1D1Y|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 3-Pbitu (H4b Free)
pdb|1FOI|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1400w(H4b-Free)
pdb|1FOI|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1400w(H4b-Free)
pdb|1FOL|A Chain A, Reduced Bovine Endothelial Nitric Oxide Synthase Heme
Domain Complexed With L-Arg(H4b-Free)
pdb|1FOL|B Chain B, Reduced Bovine Endothelial Nitric Oxide Synthase Heme
Domain Complexed With L-Arg(H4b-Free)
pdb|1FOO|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Arg And No(H4b-Free)
pdb|1FOO|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Arg And No(H4b-Free)
pdb|1FOP|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Arg And No(H4b-Bound)
pdb|1FOP|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Arg And No(H4b-Bound)
pdb|1FOJ|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 7- Nitroindazole-2-carboxamidine (h4b
Present)
pdb|1FOJ|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 7- Nitroindazole-2-carboxamidine (h4b
Present)
pdb|8NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase, Nna Complex
pdb|8NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase, Nna Complex
pdb|1D0O|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 3- Bromo-7-Nitroindazole (H4b Present)
pdb|1D0O|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 3- Bromo-7-Nitroindazole (H4b Present)
pdb|1D0C|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 3- Bromo-7-Nitroindazole (H4b Free)
pdb|1D0C|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 3- Bromo-7-Nitroindazole (H4b Free)
pdb|5NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase, H4b-free,
Hydroxy-arg Complex
pdb|5NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase, H4b-free,
Hydroxy-arg Complex
pdb|6NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase, H4b-Free,
Canavanine Complex
pdb|6NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase, H4b-Free,
Canavanine Complex
pdb|7NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase, H4b-Free, Adma
Complex
pdb|7NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase, H4b-Free, Adma
Complex
pdb|3JWW|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-[(3's,4's)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)met
Pyrrolidin-3'-Yl]-N2-
(3'-Fluorophenethyl)ethane-1,2-Diamin Tetrahydrochloride
pdb|3JWW|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-[(3's,4's)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)met
Pyrrolidin-3'-Yl]-N2-
(3'-Fluorophenethyl)ethane-1,2-Diamin Tetrahydrochloride
pdb|3JWX|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-[(3'r,4'r)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)met
Pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane-1,
2-Diamine Tetrahydrochloride
pdb|3JWX|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-[(3'r,4'r)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)met
Pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane-1,
2-Diamine Tetrahydrochloride
pdb|3JWY|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-{(3'r,4's)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Fluorophenethyl)ethane-
1,2- Tetrahydrochloride
pdb|3JWY|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-{(3'r,4's)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Fluorophenethyl)ethane-
1,2- Tetrahydrochloride
pdb|3JWZ|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With N1-[(3' S,4'
R)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)m
Pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane-1,
2-Diamine Tetrahydrochloride
pdb|3JWZ|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With N1-[(3' S,4'
R)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)m
Pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane-1,
2-Diamine Tetrahydrochloride
pdb|3NLD|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3's,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLD|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3's,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLE|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3'r,4'r)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLE|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3'r,4'r)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLF|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3'r,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLF|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3'r,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLG|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3's,4'r)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLG|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3's,4'r)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLT|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1-{(3's,4's)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-
N2-(3'-Fluorophenethyl)ethane-1,2-Diamine
Tetrahydrochloride
pdb|3NLT|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1-{(3's,4's)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-
N2-(3'-Fluorophenethyl)ethane-1,2-Diamine
Tetrahydrochloride
pdb|3NLU|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1-{(3'r,4'r)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Fluorophenethyl)ethane-
1,2-Diamine Tetrahydrochloride
pdb|3NLU|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1-{(3'r,4'r)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Fluorophenethyl)ethane-
1,2-Diamine Tetrahydrochloride
pdb|3N5P|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(2-(6-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)pyridin-
2-Yl) Ethyl)-6-Methylpyridin-2-Amine
pdb|3N5P|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(2-(6-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)pyridin-
2-Yl) Ethyl)-6-Methylpyridin-2-Amine
pdb|3N5Q|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)bis(Ethane-2,
1-Diyl))bis(4- Methylpyridin-2-Amine)
pdb|3N5Q|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)bis(Ethane-2,
1-Diyl))bis(4- Methylpyridin-2-Amine)
pdb|3N5R|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(3-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)phenethyl)-
6- Methylpyridin-2-Amine
pdb|3N5R|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(3-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)phenethyl)-
6- Methylpyridin-2-Amine
pdb|3N5S|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(2-(5-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)pyridin-
3-Yl) Ethyl)-6-Methylpyridin-2-Amine
pdb|3N5S|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(2-(5-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)pyridin-
3-Yl) Ethyl)-6-Methylpyridin-2-Amine
pdb|3N5T|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-2,
1-Diyl))bis(4- Methylpyridin-2-Amine)
pdb|3N5T|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-2,
1-Diyl))bis(4- Methylpyridin-2-Amine)
Length = 444
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 86 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 116
>pdb|3RQO|A Chain A, Structure Of The Endothelial Nitric Oxide Synthase Heme
Domain In Complex With
6-(((3r,4r)-4-(2-((1s,2r1R,2S)-2-(3-Clorophenyl)
Cyclopropylamino)ethoxy)pyrrolidin-3-Yl)methyl)-4-
Methylpyridin-2- Amine
pdb|3RQO|B Chain B, Structure Of The Endothelial Nitric Oxide Synthase Heme
Domain In Complex With
6-(((3r,4r)-4-(2-((1s,2r1R,2S)-2-(3-Clorophenyl)
Cyclopropylamino)ethoxy)pyrrolidin-3-Yl)methyl)-4-
Methylpyridin-2- Amine
pdb|3RQP|A Chain A, Structure Of The Endothelial Nitric Oxide Synthase Heme
Domain In Complex With
6-{[(3r,4r)-4-(2-{[(2r2S)-1-(3-Fluorophenyl)propan-2-
Yl]amino}ethoxy)pyrrolidin-3-Yl]methyl}-4-Methylpyridin-
2-Amine
pdb|3RQP|B Chain B, Structure Of The Endothelial Nitric Oxide Synthase Heme
Domain In Complex With
6-{[(3r,4r)-4-(2-{[(2r2S)-1-(3-Fluorophenyl)propan-2-
Yl]amino}ethoxy)pyrrolidin-3-Yl]methyl}-4-Methylpyridin-
2-Amine
Length = 443
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 85 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 115
>pdb|3SUA|D Chain D, Crystal Structure Of The Intracellular Domain Of Plexin-B1
In Complex With Rac1
pdb|3SUA|E Chain E, Crystal Structure Of The Intracellular Domain Of Plexin-B1
In Complex With Rac1
pdb|3SUA|F Chain F, Crystal Structure Of The Intracellular Domain Of Plexin-B1
In Complex With Rac1
Length = 633
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 31 AANVPKAIVLCQ-VEKAKEDMLNQLYSSV 58
A VP ++ C + +AKE ML+QLY V
Sbjct: 262 AQGVPVKVLDCDTISQAKEKMLDQLYKGV 290
>pdb|3N67|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N67|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N68|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
N368dV106M Double Mutant Complexed With
4-(3-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)phenethyl)-6-Methylpyridin-2-Amine
pdb|3N68|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
N368dV106M Double Mutant Complexed With
4-(3-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)phenethyl)-6-Methylpyridin-2-Amine
pdb|3N69|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N69|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6A|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
4-(2-(5-(2-(6-Amino-4-
Methylpyridin-2-Yl)ethyl)pyridin-3-Yl)ethyl)-6-
Methylpyridin-2-Amine
pdb|3N6A|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
4-(2-(5-(2-(6-Amino-4-
Methylpyridin-2-Yl)ethyl)pyridin-3-Yl)ethyl)-6-
Methylpyridin-2-Amine
Length = 444
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 86 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 116
>pdb|3NLH|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
N368d Mutant Complexed With 6-{{(3's,4's)-3'-[2"-(3'''-
Fluorophenethylamino)ethoxy]pyrrolidin-4'-Yl}methyl}-4-
Methylpyridin- 2-Amine
pdb|3NLH|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
N368d Mutant Complexed With 6-{{(3's,4's)-3'-[2"-(3'''-
Fluorophenethylamino)ethoxy]pyrrolidin-4'-Yl}methyl}-4-
Methylpyridin- 2-Amine
pdb|3NLI|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368d
Mutant Heme Domain Complexed With
6-{{(3'r,4'r)-3'-[2"-(3'''-
Fluorophenethylamino)ethoxy]pyrrolidin-4'-Yl}methyl}-4-
Methylpyridin- 2-Amine
pdb|3NLI|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368d
Mutant Heme Domain Complexed With
6-{{(3'r,4'r)-3'-[2"-(3'''-
Fluorophenethylamino)ethoxy]pyrrolidin-4'-Yl}methyl}-4-
Methylpyridin- 2-Amine
pdb|3N6E|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368d
Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)bis(Ethane-2,
1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6E|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368d
Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)bis(Ethane-2,
1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6F|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368d
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-
2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6F|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368d
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-
2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6G|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368d
Single Mutant Heme Domain Complexed With
4-(2-(5-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)pyridin-3-Yl)ethyl)-6-Methylpyridin-2-Amine
pdb|3N6G|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368d
Single Mutant Heme Domain Complexed With
4-(2-(5-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)pyridin-3-Yl)ethyl)-6-Methylpyridin-2-Amine
Length = 444
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 86 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 116
>pdb|3E7S|A Chain A, Structure Of Bovine Enos Oxygenase Domain With Inhibitor
Ar- C95791
Length = 431
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 68 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 98
>pdb|1RS8|A Chain A, Bovine Endothelial Nos Heme Domain With
D-Lysine-D-Nitroarginine Amide Bound
pdb|1RS8|B Chain B, Bovine Endothelial Nos Heme Domain With
D-Lysine-D-Nitroarginine Amide Bound
pdb|1RS9|A Chain A, Bovine Endothelial Nos Heme Domain With
D-Phenylalanine-D- Nitroarginine Amide Bound
pdb|1RS9|B Chain B, Bovine Endothelial Nos Heme Domain With
D-Phenylalanine-D- Nitroarginine Amide Bound
pdb|2G6O|A Chain A, Structure Of Bovine Enos Heme Domain (Bh4-Free)
Complexed With Co
pdb|2G6O|B Chain B, Structure Of Bovine Enos Heme Domain (Bh4-Free)
Complexed With Co
pdb|2HX2|A Chain A, Bovine Enos Heme Domain Complexed With
(4s)-N-{4-Amino-5-[(2-
Aminoethyl)-Hydroxyamino]-Pentyl}-N'-Nitroguanidine
pdb|2HX2|B Chain B, Bovine Enos Heme Domain Complexed With
(4s)-N-{4-Amino-5-[(2-
Aminoethyl)-Hydroxyamino]-Pentyl}-N'-Nitroguanidine
pdb|3DQS|A Chain A, Structure Of Endothelial Nos Heme Domain In Complex With
A Inhibitor
(+-)-N1-{cis-4'-[(6"-Amino-4"-Methylpyridin-2"-
Yl)methyl]pyrrolidin-
3'-Yl}-N2-(4'-Chlorobenzyl)ethane-1,2-Diamine
pdb|3DQS|B Chain B, Structure Of Endothelial Nos Heme Domain In Complex With
A Inhibitor
(+-)-N1-{cis-4'-[(6"-Amino-4"-Methylpyridin-2"-
Yl)methyl]pyrrolidin-
3'-Yl}-N2-(4'-Chlorobenzyl)ethane-1,2-Diamine
pdb|3DQT|A Chain A, Structure Of Endothelial Nos Heme Domain In Complex With
A Inhibitor
(+-)-N1-{trans-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Chlorobenzyl)ethane-1,
2-Diamine
pdb|3DQT|B Chain B, Structure Of Endothelial Nos Heme Domain In Complex With
A Inhibitor
(+-)-N1-{trans-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Chlorobenzyl)ethane-1,
2-Diamine
pdb|3PNH|A Chain A, Structure Of Bovine Endothelial Nitric Oxide Synthase
Heme Domain In Complex With
6-(((3r,4r)-4-(2-((2-Fluoro-2-(3-Fluorophenyl) Ethyl)
Amino)ethoxy)pyrrolidin-3-Yl)methyl)-4-Methylpyridin-2-
Amine
pdb|3PNH|B Chain B, Structure Of Bovine Endothelial Nitric Oxide Synthase
Heme Domain In Complex With
6-(((3r,4r)-4-(2-((2-Fluoro-2-(3-Fluorophenyl) Ethyl)
Amino)ethoxy)pyrrolidin-3-Yl)methyl)-4-Methylpyridin-2-
Amine
Length = 416
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 58 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 88
>pdb|1ZZS|A Chain A, Bovine Enos N368d Single Mutant With
L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide
Bound
pdb|1ZZS|B Chain B, Bovine Enos N368d Single Mutant With
L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide
Bound
Length = 416
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 58 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 88
>pdb|1ZZT|A Chain A, Bovine Enos N368dV106M DOUBLE MUTANT WITH L-N(Omega)-
Nitroarginine-(4r)-Amino-L-Proline Amide Bound
pdb|1ZZT|B Chain B, Bovine Enos N368dV106M DOUBLE MUTANT WITH L-N(Omega)-
Nitroarginine-(4r)-Amino-L-Proline Amide Bound
Length = 416
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 58 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 88
>pdb|1P6L|A Chain A, Bovine Endothelial Nos Heme Domain With
L-N(Omega)-Nitroarginine-2,4- L-Diaminobutyric Amide
Bound
pdb|1P6L|B Chain B, Bovine Endothelial Nos Heme Domain With
L-N(Omega)-Nitroarginine-2,4- L-Diaminobutyric Amide
Bound
pdb|1P6M|A Chain A, Bovine Endothelial Nos Heme Domain With
(4s)-N-(4-Amino-5-
[aminoethyl]aminopentyl)-N'-Nitroguanidine Bound
pdb|1P6M|B Chain B, Bovine Endothelial Nos Heme Domain With
(4s)-N-(4-Amino-5-
[aminoethyl]aminopentyl)-N'-Nitroguanidine Bound
pdb|1P6N|A Chain A, Bovine Endothelial Nos Heme Domain With
L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide
Bound
pdb|1P6N|B Chain B, Bovine Endothelial Nos Heme Domain With
L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide
Bound
Length = 417
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 58 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 88
>pdb|1I83|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1,N14-Bis((S-Methyl)isothioureido)tetradecane (H4b
Free)
pdb|1I83|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1,N14-Bis((S-Methyl)isothioureido)tetradecane (H4b
Free)
Length = 444
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 86 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 116
>pdb|3E7S|B Chain B, Structure Of Bovine Enos Oxygenase Domain With Inhibitor
Ar- C95791
Length = 431
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 68 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 98
>pdb|3N6B|A Chain A, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-
2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6B|B Chain B, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-
2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6C|A Chain A, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
4-(2-(6-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)pyridin-2-Yl)ethyl)-6-Methylpyridin-2-Amine
pdb|3N6C|B Chain B, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
4-(2-(6-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)pyridin-2-Yl)ethyl)-6-Methylpyridin-2-Amine
pdb|3N6D|A Chain A, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6D|B Chain B, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
Length = 444
Score = 25.8 bits (55), Expect = 6.4, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 42 QVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
Q+ D +NQ YSS+ + EE LQE
Sbjct: 86 QLLSQARDFINQYYSSIKRSGSQAHEERLQE 116
>pdb|2DK9|A Chain A, Solution Structure Of Calponin Homology Domain Of Human
Mical-1
Length = 118
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 9 EEELRWISQKVSGYVEAVLNSLAANVPKAIVLC 41
EE LRW ++ +GY ++ L+++ + LC
Sbjct: 16 EELLRWCQEQTAGYPGVHVSDLSSSWADGLALC 48
>pdb|1WYL|A Chain A, Solution Structure Of The Ch Domain Of Human Nedd9
Interacting Protein With Calponin Homology And Lim
Domains
Length = 116
Score = 25.4 bits (54), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 9 EEELRWISQKVSGYVEAVLNSLAANVPKAIVLC 41
EE LRW ++ +GY ++ L+++ + LC
Sbjct: 10 EELLRWCQEQTAGYPGVHVSDLSSSWADGLALC 42
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.311 0.124 0.328
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,809,353
Number of Sequences: 62578
Number of extensions: 47063
Number of successful extensions: 146
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 129
Number of HSP's gapped (non-prelim): 22
length of query: 73
length of database: 14,973,337
effective HSP length: 43
effective length of query: 30
effective length of database: 12,282,483
effective search space: 368474490
effective search space used: 368474490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 45 (21.9 bits)