BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035101
(73 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2
Length = 914
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 63/73 (86%)
Query: 1 MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
M R+ DPEEELRW+SQ+V GYVEAVLNSLAANVPKA+VLCQVEKAKEDMLNQLYSS++A
Sbjct: 719 MVRKPIDPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISA 778
Query: 61 QSTAMIEELLQED 73
IE L+QED
Sbjct: 779 IGNERIESLIQED 791
>sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2
Length = 920
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 63/73 (86%)
Query: 1 MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
M R+ DPEEELRW+SQ+V GYVEAVLNSLAANVPKA+VLCQVEK+KEDMLNQLYSS++A
Sbjct: 726 MVRKPVDPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISA 785
Query: 61 QSTAMIEELLQED 73
IE L+QED
Sbjct: 786 IGNERIESLIQED 798
>sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1
SV=2
Length = 614
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 6 ADP--EEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQST 63
ADP + R I VS Y+ V ++L ++PKA+V CQV +AK +LN Y+ V +
Sbjct: 515 ADPYSDNHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEK 574
Query: 64 AMIEELLQED 73
+ +L ED
Sbjct: 575 EKLGAMLDED 584
>sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1
SV=1
Length = 624
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 9 EEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEE 68
+ R I+ VS YV V ++L +PKA V CQV +AK +LN YS ++ + + +
Sbjct: 529 DGHFRRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQ 588
Query: 69 LLQED 73
LL ED
Sbjct: 589 LLDED 593
>sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A OS=Glycine max PE=2 SV=1
Length = 610
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 12 LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
LR I + YV V +L ++PK+IV CQV +AK +L+ ++ + T + LL
Sbjct: 518 LRRIGTTILSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLN 577
Query: 72 ED 73
ED
Sbjct: 578 ED 579
>sp|Q8S3C9|DRP1D_ARATH Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2
SV=2
Length = 612
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 9 EEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEE 68
+ R I+ V+ Y++ V +L +PKA+V CQV +AK +LN Y+ ++ + +
Sbjct: 517 DGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQ 576
Query: 69 LLQED 73
LL E+
Sbjct: 577 LLDEN 581
>sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A OS=Glycine max PE=1 SV=1
Length = 610
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 12 LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
LR I + YV V +L ++PK+IV CQV +AK +L+ ++ + + LL
Sbjct: 518 LRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLN 577
Query: 72 ED 73
ED
Sbjct: 578 ED 579
>sp|P42697|DRP1A_ARATH Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1
SV=3
Length = 610
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 12 LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
LR I V YV V L ++PK+IV CQV +AK +L+ ++ + + LL
Sbjct: 518 LRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLN 577
Query: 72 ED 73
ED
Sbjct: 578 ED 579
>sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2
SV=1
Length = 610
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 12 LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
LR I V YV V L ++PK+IV CQV +AK +L+ ++ + + + + +LL
Sbjct: 518 LRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLD 577
Query: 72 ED 73
ED
Sbjct: 578 ED 579
>sp|C0M9F6|DTD_STRE4 D-tyrosyl-tRNA(Tyr) deacylase OS=Streptococcus equi subsp. equi
(strain 4047) GN=dtd PE=3 SV=1
Length = 147
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 3 RRLADPEEELRWISQKVSGYVEAVLN-SLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQ 61
R +DPE ++ Q + G V ++ +L A+ K AK D +QLY+S NAQ
Sbjct: 53 RIFSDPEGKMNRSIQDIEGSVLSISQFTLYADTKKGNRPAFTGAAKPDRASQLYNSFNAQ 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.124 0.328
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,177,610
Number of Sequences: 539616
Number of extensions: 628327
Number of successful extensions: 2325
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2315
Number of HSP's gapped (non-prelim): 19
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)