BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035104
(73 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 1 MASSSSFSSCRYDVFLSFRGEDTRDNFLSHLVEALRQKKIKSFIDNEELSRGDGISPSLL 60
M +SS S RYDVF SFRGED RD+FLSHL++ LR K I +FID+ E+ R I P LL
Sbjct: 1 MEIASSSGSRRYDVFPSFRGEDVRDSFLSHLLKELRGKAI-TFIDD-EIERSRSIGPELL 58
Query: 61 KAIKESKISVIIF 73
AIKES+I+++IF
Sbjct: 59 SAIKESRIAIVIF 71
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 50/73 (68%)
Query: 1 MASSSSFSSCRYDVFLSFRGEDTRDNFLSHLVEALRQKKIKSFIDNEELSRGDGISPSLL 60
MASSSS S YDVFLSFRGEDTR F SHL E L K IK+F D++ L G I L
Sbjct: 1 MASSSSSSRWSYDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELC 60
Query: 61 KAIKESKISVIIF 73
KAI+ES+ ++++F
Sbjct: 61 KAIEESQFAIVVF 73
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 1 MASSSSFSSCRYDVFLSFRGEDTRDNFLSHLVEALRQKKIKSFIDNEELSRGDGISPSLL 60
MASSSS +S RYDVF SFRGED R+NFLSHL++ K I +F D+ + R I L
Sbjct: 1 MASSSS-NSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDD-HIKRSHTIGHELR 58
Query: 61 KAIKESKISVIIF 73
AI+ESKISV++F
Sbjct: 59 AAIRESKISVVLF 71
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 1 MASSSSF--SSCRYDVFLSFRGEDTRDNFLSHLVEALRQKKIKSFIDNEELSRGDGISPS 58
MA+SSS + VF++FRG+D R+ FLS L A+R+ I FID +E+ D + +
Sbjct: 1 MAASSSVRPTPTGPQVFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDLV--N 58
Query: 59 LLKAIKESKISVIIF 73
L I+ES+++V+IF
Sbjct: 59 LFVRIQESRVAVVIF 73
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 1 MASSSSF---SSCRYDVFLSFRGEDTRDNFLSHLVEALRQKKIKSFIDNEELSRGDGISP 57
MASSSS + VF+ FRG D R +F+S LV ALR+ I FID E +
Sbjct: 1 MASSSSVVKPTPTGPQVFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSE--MA 58
Query: 58 SLLKAIKESKISVIIF 73
+LL I+ES+++++IF
Sbjct: 59 NLLTRIEESELALVIF 74
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 14 VFLSFRGEDTRDNFLSHLVEALRQKKIKSFIDNEELSRGDGISPSLLKAIKESKISVIIF 73
VF++FRG+D R F+S L AL+++KI FID +E RG + SL I ESKI+++IF
Sbjct: 24 VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQE-ERGKYLI-SLFDTIGESKIALVIF 81
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 11 RYDVFLSFRGEDTRDNFLSHLVEALRQKKIKSFIDNEELSRGDGISPSLLKAIKESKISV 70
+Y VF++FRG++ R++F+ LV+A+R +KI F D EL RG ++ L + I+ES+++V
Sbjct: 357 QYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVEL-RGTNLN-YLFRRIEESRVAV 414
Query: 71 IIF 73
IF
Sbjct: 415 AIF 417
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 21 EDTRDNFLSHLVEALRQKKIKSFIDNEELSRGDGISPSLLKAIKESKISVIIF 73
ED ++ L L+ K I FID EE+ RG G+ +L K I++SKIS+ IF
Sbjct: 51 EDVSKGLINFLEPVLQNKNINVFIDEEEV-RGKGLK-NLFKRIQDSKISLAIF 101
>sp|Q27655|ENO_FASHE Enolase OS=Fasciola hepatica GN=ENO PE=2 SV=1
Length = 431
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Query: 4 SSSFSSCR------YDVFLSFRGEDTRDNFLSHLVEALRQKKIKS 42
S S +C+ + V +S R +T DNF++ LV LR +IK+
Sbjct: 351 SESIKACKMAQEAGWGVMVSHRSGETEDNFIADLVVGLRTGQIKT 395
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,944,600
Number of Sequences: 539616
Number of extensions: 771847
Number of successful extensions: 2621
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2611
Number of HSP's gapped (non-prelim): 9
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)