BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035110
MGAEEDQQSEEPRGKSISQAQFVSWKRQKDADASARKEEAARKRAEDIAAGTVQMNGREL
FLHEPWVFDNTHY

High Scoring Gene Products

Symbol, full name Information P value
AT1G22140 protein from Arabidopsis thaliana 3.5e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035110
        (73 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030596 - symbol:AT1G22140 "AT1G22140" species...   154  3.5e-11   1


>TAIR|locus:2030596 [details] [associations]
            symbol:AT1G22140 "AT1G22140" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AY058114
            EMBL:AY094050 EMBL:AY088493 IPI:IPI00519122 RefSeq:NP_564158.1
            UniGene:At.26621 EnsemblPlants:AT1G22140.1 GeneID:838819
            KEGG:ath:AT1G22140 TAIR:At1g22140 HOGENOM:HOG000005680
            InParanoid:Q93Z58 OMA:AVQMNGR PhylomeDB:Q93Z58
            ProtClustDB:CLSN2687907 Genevestigator:Q93Z58 Uniprot:Q93Z58
        Length = 72

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 32/73 (43%), Positives = 40/73 (54%)

Query:     1 MGAEEDQQSEEPRGKSISQAQFVSWKRQXXXXXXXXXXXXXXXXXXXXXXGTVQMNGREL 60
             MGA   + + +P   SIS+ QF++WKRQ                      G V MNGREL
Sbjct:     1 MGAGNGE-TPKPTQISISKDQFLAWKRQKDAELLAKQAEAARKRQEDIASGRVPMNGREL 59

Query:    61 FLHEPWVFDNTHY 73
             FLHEPWVFD+TH+
Sbjct:    60 FLHEPWVFDDTHH 72


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.129   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       73        51   0.00091  102 3  11 23  0.44    27
                                                     29  0.44    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  510 (54 KB)
  Total size of DFA:  94 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.49u 0.12s 5.61t   Elapsed:  00:00:00
  Total cpu time:  5.49u 0.12s 5.61t   Elapsed:  00:00:00
  Start:  Fri May 10 05:43:14 2013   End:  Fri May 10 05:43:14 2013

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