BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035110
(73 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54DA5|ZC3HF_DICDI Zinc finger CCCH domain-containing protein 15 homolog
OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1
Length = 373
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 17 ISQAQFVSWKRQKDADASARKEEAARKRAEDIAAGTVQMNGRELFLHEPWVF 68
++ F+ WK +K ++A KR DI AG M+GRE+F+ P +F
Sbjct: 243 VTLETFLRWKEEKRLQKEKAAKDAQDKRLADIKAGKTSMSGREMFVFNPDLF 294
>sp|Q6DD06|ZC3HF_XENLA Zinc finger CCCH domain-containing protein 15 OS=Xenopus laevis
GN=zc3h15 PE=2 SV=1
Length = 426
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 12 PRGKSISQAQFVSWKRQKDADASARKEEAARKRAEDIAAG-TVQMNGRELFLHEPWVFD 69
P I+ F+ WK++K AD + EE KR ED +G ++ ++GRE+F P + +
Sbjct: 246 PNVTRITLESFLQWKKRKRADRILKLEEEMEKRKEDFKSGKSLGVSGREVFEFRPELIN 304
>sp|A4IGY3|ZC3HF_XENTR Zinc finger CCCH domain-containing protein 15 OS=Xenopus tropicalis
GN=zc3h15 PE=2 SV=1
Length = 426
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 17 ISQAQFVSWKRQKDADASARKEEAARKRAEDIAAG-TVQMNGRELFLHEPWVFD 69
I+ F+ WK++K D + EE KR D AG ++ ++GRE+F P + +
Sbjct: 251 ITLESFLEWKKRKRQDRIVKLEEEMEKRKADFKAGKSLGISGREVFEFRPELIN 304
>sp|Q5H7N8|ZC3HF_CHICK Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus
GN=ZC3H15 PE=1 SV=1
Length = 429
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 12 PRGKSISQAQFVSWKRQKDADASARKEEAARKRAEDIAAG-TVQMNGRELFLHEP 65
P I+ F++WKR+K + + E+ +R D AG + ++GRE+F P
Sbjct: 246 PNVTKITLECFIAWKRRKRQEKIDKAEQDMERRKADFKAGKALVISGREVFEFRP 300
>sp|Q0KL00|PIEZ1_RAT Piezo-type mechanosensitive ion channel component 1 OS=Rattus
norvegicus GN=Piezo1 PE=2 SV=3
Length = 2535
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 10 EEPR--GKSISQAQFVSWKRQKDADASARKEEAARKRAEDIAAG 51
E+PR +S Q + +W R+E+A R RAE +A+G
Sbjct: 1415 EDPRPAAQSAFQMAYQAWVTNAQTVLRQRREQARRDRAEQLASG 1458
>sp|Q8WU90|ZC3HF_HUMAN Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens
GN=ZC3H15 PE=1 SV=1
Length = 426
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 12 PRGKSISQAQFVSWKRQKDADASARKEEAARKRAEDIAAG-TVQMNGRELFLHEPWVFDN 70
P I+ F++WK++K + + E+ +R D AG + ++GRE+F P + ++
Sbjct: 245 PNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFEFRPELVND 304
>sp|Q6U6G5|ZC3HF_RAT Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus
GN=Zc3h15 PE=2 SV=1
Length = 426
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 12 PRGKSISQAQFVSWKRQKDADASARKEEAARKRAEDIAAG-TVQMNGRELFLHEPWVFDN 70
P I+ F++WK++K + + E+ +R D AG + ++GRE+F P + ++
Sbjct: 245 PNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFEFRPELVND 304
>sp|Q3TIV5|ZC3HF_MOUSE Zinc finger CCCH domain-containing protein 15 OS=Mus musculus
GN=Zc3h15 PE=1 SV=2
Length = 426
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 12 PRGKSISQAQFVSWKRQKDADASARKEEAARKRAEDIAAG-TVQMNGRELFLHEPWVFDN 70
P I+ F++WK++K + + E+ +R D AG + ++GRE+F P + ++
Sbjct: 245 PNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFEFRPELVND 304
>sp|Q1RMM1|ZC3HF_BOVIN Zinc finger CCCH domain-containing protein 15 OS=Bos taurus
GN=ZC3H15 PE=2 SV=1
Length = 426
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 12 PRGKSISQAQFVSWKRQKDADASARKEEAARKRAEDIAAG-TVQMNGRELFLHEP 65
P I+ F++WK++K + + E+ +R D AG + ++GRE+F P
Sbjct: 245 PNVTKITLESFLAWKKRKRQEKIDKLEQDIERRKADFKAGKALVISGREVFEFRP 299
>sp|Q0JHZ2|C3H11_ORYSJ Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa
subsp. japonica GN=Os01g0834700 PE=2 SV=2
Length = 366
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 5 EDQQSEEPRGKSISQAQFVSWKRQKDADASARKEEAARKRAEDIAAGTVQMNGRELFLHE 64
EDQ+ + ++ F+ WKR+K A R+ A RAE A +M+GRELF+ +
Sbjct: 225 EDQRKKVKTTTPMTTDLFMEWKRKK---AEEREAGLAALRAE--RAKNDRMSGRELFMAD 279
Query: 65 PWVF 68
VF
Sbjct: 280 SSVF 283
>sp|Q803J8|ZC3HF_DANRE Zinc finger CCCH domain-containing protein 15 OS=Danio rerio
GN=zc3h15 PE=2 SV=1
Length = 433
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 17 ISQAQFVSWKRQKDADASARKEEAARKRAEDIAAG-TVQMNGRELFLHEP 65
I+ F++WK++K + A+ E+ ++ D AG + ++GRE+F P
Sbjct: 252 ITLETFLAWKKRKRQEKLAKAEQDMERKKADFKAGRALGVSGREVFEFRP 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.124 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,737,023
Number of Sequences: 539616
Number of extensions: 780949
Number of successful extensions: 3335
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 3280
Number of HSP's gapped (non-prelim): 79
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)