BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035119
MGHTGEFFRRRDGWRKHPLLTSNLRQATPGLGIALVAFGIYLVGEQVYNRVIAPSPSHSH
HTHHQHSAASSSH

High Scoring Gene Products

Symbol, full name Information P value
AT1G14450 protein from Arabidopsis thaliana 1.3e-15
AT2G02510 protein from Arabidopsis thaliana 1.4e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035119
        (73 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2012592 - symbol:AT1G14450 species:3702 "Arabi...   196  1.3e-15   1
TAIR|locus:2065243 - symbol:AT2G02510 species:3702 "Arabi...   186  1.4e-14   1


>TAIR|locus:2012592 [details] [associations]
            symbol:AT1G14450 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM;IEA] [GO:0008137 "NADH
            dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0009853
            "photorespiration" evidence=RCA;TAS] [GO:0031966 "mitochondrial
            membrane" evidence=IDA] [GO:0045271 "respiratory chain complex I"
            evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=RCA] [GO:0051788 "response to misfolded protein"
            evidence=RCA] [GO:0080129 "proteasome core complex assembly"
            evidence=RCA] InterPro:IPR012576 Pfam:PF08122 GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005743 GO:GO:0031966
            GO:GO:0022900 GO:GO:0008137 GO:GO:0009853 EMBL:AC012188
            UniGene:At.21766 HOGENOM:HOG000239168 ProtClustDB:CLSN2683692
            EMBL:AF332453 EMBL:BT008330 EMBL:AK228233 EMBL:AY087079
            IPI:IPI00529667 PIR:B86279 RefSeq:NP_563952.1 UniGene:At.12047
            STRING:Q9M9R9 PaxDb:Q9M9R9 PRIDE:Q9M9R9 GeneID:838007
            KEGG:ath:AT1G14450 TAIR:At1g14450 eggNOG:NOG306691
            InParanoid:Q9M9R9 OMA:NATGEFF PhylomeDB:Q9M9R9
            Genevestigator:Q9M9R9 GO:GO:0045271 Uniprot:Q9M9R9
        Length = 73

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 33/52 (63%), Positives = 43/52 (82%)

Query:     1 MGHTGEFFRRRDGWRKHPLLTSNLRQATPGLGIALVAFGIYLVGEQVYNRVI 52
             +G TGEFFRRRD WRKHP+L++ +R A PGLGI + AF +YLVGEQ+YN+ +
Sbjct:     5 LGTTGEFFRRRDEWRKHPMLSNQMRHALPGLGIGVAAFCVYLVGEQIYNKAL 56


>TAIR|locus:2065243 [details] [associations]
            symbol:AT2G02510 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008137 "NADH
            dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0005747
            "mitochondrial respiratory chain complex I" evidence=IDA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0051788 "response to misfolded protein" evidence=RCA]
            [GO:0080129 "proteasome core complex assembly" evidence=RCA]
            InterPro:IPR012576 Pfam:PF08122 GO:GO:0016021 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0022900 GO:GO:0005747 GO:GO:0008137
            EMBL:AC004136 EMBL:AY065171 EMBL:AY114592 EMBL:AK176744
            IPI:IPI00542004 PIR:T00612 RefSeq:NP_178355.1 UniGene:At.28574
            IntAct:O64725 STRING:O64725 PRIDE:O64725 GeneID:814780
            KEGG:ath:AT2G02510 TAIR:At2g02510 eggNOG:NOG322929
            HOGENOM:HOG000239168 InParanoid:O64725 OMA:QIYSKLM PhylomeDB:O64725
            ProtClustDB:CLSN2683692 Genevestigator:O64725 Uniprot:O64725
        Length = 72

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 31/52 (59%), Positives = 44/52 (84%)

Query:     1 MGHTGEFFRRRDGWRKHPLLTSNLRQATPGLGIALVAFGIYLVGEQVYNRVI 52
             +G TGEFFRRRD WRKHP+L++ +R A PG+GI + AF +YLVGEQ+Y++++
Sbjct:     5 LGTTGEFFRRRDEWRKHPMLSNQMRHALPGIGIGVGAFCVYLVGEQIYSKLM 56


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.146   0.462    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       73        52   0.00091  102 3  11 22  0.39    27
                                                     29  0.47    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  474 (50 KB)
  Total size of DFA:  80 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.73u 0.14s 6.87t   Elapsed:  00:00:00
  Total cpu time:  6.73u 0.14s 6.87t   Elapsed:  00:00:00
  Start:  Fri May 10 05:45:46 2013   End:  Fri May 10 05:45:46 2013

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