BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035132
(72 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYB4|CAAT3_ARATH Cationic amino acid transporter 3, mitochondrial OS=Arabidopsis
thaliana GN=CAT3 PE=2 SV=1
Length = 609
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 26/30 (86%)
Query: 4 SVDSTLGAGAYILVGTVAREHSGPALTLSF 33
V ST+GAG YILVGTVAREHSGPAL LSF
Sbjct: 42 GVGSTIGAGVYILVGTVAREHSGPALALSF 71
>sp|Q9ASS7|CAAT2_ARATH Cationic amino acid transporter 2, vacuolar OS=Arabidopsis
thaliana GN=CAT2 PE=1 SV=1
Length = 635
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 4 SVDSTLGAGAYILVGTVAREHSGPALTLSF 33
V +T+GAG YILVGTVAREHSGP+L LSF
Sbjct: 53 GVGATIGAGVYILVGTVAREHSGPSLALSF 82
>sp|Q8W4K3|CAAT4_ARATH Cationic amino acid transporter 4, vacuolar OS=Arabidopsis
thaliana GN=CAT4 PE=1 SV=1
Length = 600
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 4 SVDSTLGAGAYILVGTVAREHSGPALTLSF 33
V +T+GAG YILVGTVAREH+GPAL +SF
Sbjct: 37 GVGTTIGAGVYILVGTVAREHTGPALAVSF 66
>sp|Q09143|CTR1_MOUSE High affinity cationic amino acid transporter 1 OS=Mus musculus
GN=Slc7a1 PE=2 SV=1
Length = 622
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VARE++GPA+ +SF
Sbjct: 42 VGSTLGAGVYVLAGAVARENAGPAIVISF 70
>sp|P30823|CTR1_RAT High affinity cationic amino acid transporter 1 OS=Rattus
norvegicus GN=Slc7a1 PE=2 SV=1
Length = 624
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VARE++GPA+ +SF
Sbjct: 42 VGSTLGAGVYVLAGAVARENAGPAIVISF 70
>sp|P30825|CTR1_HUMAN High affinity cationic amino acid transporter 1 OS=Homo sapiens
GN=SLC7A1 PE=1 SV=1
Length = 629
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VARE++GPA+ +SF
Sbjct: 42 VGSTLGAGVYVLAGAVARENAGPAIVISF 70
>sp|B3TP03|CTR2_CHICK Low affinity cationic amino acid transporter 2 OS=Gallus gallus
GN=SLC7A2 PE=2 SV=1
Length = 654
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VA+ SGP++ +SF
Sbjct: 43 VGSTLGAGVYVLAGEVAKSDSGPSIVVSF 71
>sp|P18581|CTR2_MOUSE Low affinity cationic amino acid transporter 2 OS=Mus musculus
GN=Slc7a2 PE=1 SV=3
Length = 657
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VA+ SGP++ +SF
Sbjct: 44 VGSTLGAGVYVLAGEVAKADSGPSIVVSF 72
>sp|B5D5N9|CTR2_RAT Low affinity cationic amino acid transporter 2 OS=Rattus
norvegicus GN=Slc7a2 PE=2 SV=1
Length = 657
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VA+ SGP++ +SF
Sbjct: 44 VGSTLGAGVYVLAGEVAKADSGPSIVVSF 72
>sp|A8I499|CTR2_PIG Low affinity cationic amino acid transporter 2 OS=Sus scrofa
GN=SLC7A2 PE=2 SV=1
Length = 657
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VA+ SGP++ +SF
Sbjct: 44 VGSTLGAGVYVLAGEVAKADSGPSIVVSF 72
>sp|P52569|CTR2_HUMAN Low affinity cationic amino acid transporter 2 OS=Homo sapiens
GN=SLC7A2 PE=1 SV=2
Length = 658
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VA+ SGP++ +SF
Sbjct: 44 VGSTLGAGVYVLAGEVAKADSGPSIVVSF 72
>sp|Q6DCE8|CTR2_XENLA Low affinity cationic amino acid transporter 2 OS=Xenopus laevis
GN=slc7a2 PE=2 SV=1
Length = 622
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VA+ SGP++ +SF
Sbjct: 44 VGSTLGAGVYVLAGEVAKVDSGPSIIISF 72
>sp|Q5PR34|CTR2_DANRE Low affinity cationic amino acid transporter 2 OS=Danio rerio
GN=slc7a2 PE=2 SV=1
Length = 640
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VA+ SGP++ +SF
Sbjct: 42 VGSTLGAGVYVLAGEVAKGSSGPSIVVSF 70
>sp|O08812|CTR3_RAT Cationic amino acid transporter 3 OS=Rattus norvegicus GN=Slc7a3
PE=2 SV=1
Length = 619
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 4 SVDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VA+E +GP++ + F
Sbjct: 41 GVGSTLGAGVYVLAGEVAKEKAGPSIVICF 70
>sp|P70423|CTR3_MOUSE Cationic amino acid transporter 3 OS=Mus musculus GN=Slc7a3 PE=2
SV=1
Length = 618
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VA++ +GP++ + F
Sbjct: 42 VGSTLGAGVYVLAGEVAKDKAGPSIVICF 70
>sp|Q8WY07|CTR3_HUMAN Cationic amino acid transporter 3 OS=Homo sapiens GN=SLC7A3 PE=1
SV=1
Length = 619
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V STLGAG Y+L G VA++ +GP++ + F
Sbjct: 42 VGSTLGAGVYVLAGEVAKDKAGPSIVICF 70
>sp|Q8BLQ7|CTR4_MOUSE Cationic amino acid transporter 4 OS=Mus musculus GN=Slc7a4 PE=1
SV=1
Length = 635
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V +G+G Y+L GTVA++ +GPA+ LSF
Sbjct: 47 VGGMVGSGLYVLTGTVAKDMAGPAVLLSF 75
>sp|Q84MA5|CAAT1_ARATH Cationic amino acid transporter 1 OS=Arabidopsis thaliana GN=CAT1
PE=1 SV=1
Length = 594
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSFPYS 36
+ + +G+G ++L G AR HSGPA+ LS+ S
Sbjct: 84 IGAVIGSGIFVLTGLEARNHSGPAVVLSYVVS 115
>sp|O43246|CTR4_HUMAN Cationic amino acid transporter 4 OS=Homo sapiens GN=SLC7A4 PE=2
SV=3
Length = 635
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V +G+G Y+L G VA+E +GPA+ LSF
Sbjct: 47 VGGMVGSGLYVLTGAVAKEVAGPAVLLSF 75
>sp|Q9C5D6|CAAT9_ARATH Cationic amino acid transporter 9, chloroplastic OS=Arabidopsis
thaliana GN=CAT9 PE=2 SV=1
Length = 569
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 12/58 (20%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSFPYSWNSFCFFSLLLCRACKSLAICWECLS 62
V +++GAG +++ GTVAR+ +GP +T+SF LL +C A+C+ LS
Sbjct: 62 VGASIGAGVFVVTGTVARD-AGPGVTISF-----------LLAGASCVLNALCYAELS 107
>sp|O64759|CAAT5_ARATH Cationic amino acid transporter 5 OS=Arabidopsis thaliana GN=CAT5
PE=1 SV=1
Length = 569
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 7 STLGAGAYILVGTVAREHSGPALTLSF 33
S +GAG ++L G A E +GPA+ LS+
Sbjct: 80 SVIGAGIFVLTGQEAHEQAGPAIVLSY 106
>sp|A0JNI9|S7A14_BOVIN Probable cationic amino acid transporter OS=Bos taurus GN=SLC7A14
PE=2 SV=1
Length = 771
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V S +G G Y++ G VA+E +GP + +SF
Sbjct: 63 VGSCVGTGMYVVSGLVAKEMAGPGVIVSF 91
>sp|Q8TBB6|S7A14_HUMAN Probable cationic amino acid transporter OS=Homo sapiens
GN=SLC7A14 PE=2 SV=3
Length = 771
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V S +G G Y++ G VA+E +GP + +SF
Sbjct: 63 VGSCVGTGMYVVSGLVAKEMAGPGVIVSF 91
>sp|Q8BXR1|S7A14_MOUSE Probable cationic amino acid transporter OS=Mus musculus
GN=Slc7a14 PE=2 SV=1
Length = 771
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 5 VDSTLGAGAYILVGTVAREHSGPALTLSF 33
V S +G G Y++ G VA+E +GP + +SF
Sbjct: 63 VGSCVGTGMYVVSGLVAKEMAGPGVIVSF 91
>sp|Q797A7|YFNA_BACSU Uncharacterized amino acid permease YfnA OS=Bacillus subtilis
(strain 168) GN=yfnA PE=3 SV=1
Length = 461
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 8 TLGAGAYILVGTVAREHSGPALTLSF 33
+G G +++ GTVA +GPAL +SF
Sbjct: 39 VIGTGIFVITGTVAATGAGPALIISF 64
>sp|Q9SHH0|CAAT8_ARATH Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana
GN=CAT8 PE=1 SV=1
Length = 590
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 4 SVDSTLGAGAYILVGTVAREHSGPALTLSFPYS 36
S S +G+G +++ G AR +GPA+ LS+ S
Sbjct: 94 SFGSVVGSGVFVITGQEARVGAGPAVVLSYAIS 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.139 0.506
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,395,901
Number of Sequences: 539616
Number of extensions: 760265
Number of successful extensions: 2472
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2444
Number of HSP's gapped (non-prelim): 30
length of query: 72
length of database: 191,569,459
effective HSP length: 44
effective length of query: 28
effective length of database: 167,826,355
effective search space: 4699137940
effective search space used: 4699137940
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 55 (25.8 bits)