Query 035132
Match_columns 72
No_of_seqs 115 out of 1101
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 15:33:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035132.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035132hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gsia_ c.37.1.1 (A:) Thymidyl 11.1 35 0.0026 19.5 0.8 13 1-13 1-13 (208)
2 d1uf9a_ c.37.1.1 (A:) Dephosph 8.5 39 0.0029 19.3 0.2 12 2-13 5-16 (191)
3 d1woqa2 c.55.1.10 (A:140-263) 7.8 40 0.0029 18.8 0.0 14 2-15 7-20 (124)
4 d1jboa_ a.1.1.3 (A:) Phycocyan 7.6 22 0.0016 21.7 -1.4 18 55-72 71-88 (162)
5 d1vhta_ c.37.1.1 (A:) Dephosph 5.9 77 0.0056 18.6 0.6 12 2-13 5-16 (208)
6 d1kifa1 c.4.1.2 (A:1-194,A:288 5.6 73 0.0053 18.0 0.4 8 7-14 4-11 (246)
7 d1q20a_ c.37.1.5 (A:) Choleste 5.5 79 0.0058 19.4 0.5 13 51-65 51-63 (294)
8 d2vp4a1 c.37.1.1 (A:12-208) De 5.5 70 0.0051 18.0 0.2 12 1-12 10-21 (197)
9 d1rz3a_ c.37.1.6 (A:) Hypothet 5.4 72 0.0052 17.5 0.2 12 1-12 23-34 (198)
10 d1alla_ a.1.1.3 (A:) Allophyco 5.4 51 0.0037 19.7 -0.5 13 60-72 72-84 (160)
No 1
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=11.14 E-value=35 Score=19.54 Aligned_cols=13 Identities=31% Similarity=0.455 Sum_probs=9.5
Q ss_pred CeEeecceecchh
Q 035132 1 MNKSVDSTLGAGA 13 (72)
Q Consensus 1 ~~l~vG~~IGsGI 13 (72)
+++++-+++|||=
T Consensus 1 mlI~ieG~dGsGK 13 (208)
T d1gsia_ 1 MLIAIEGVDGAGK 13 (208)
T ss_dssp CEEEEECSTTSSH
T ss_pred CEEEEECCCCCCH
Confidence 4677778888885
No 2
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=8.51 E-value=39 Score=19.28 Aligned_cols=12 Identities=17% Similarity=0.451 Sum_probs=9.2
Q ss_pred eEeecceecchh
Q 035132 2 NKSVDSTLGAGA 13 (72)
Q Consensus 2 ~l~vG~~IGsGI 13 (72)
.+++.+.+|||=
T Consensus 5 IIgitG~~gSGK 16 (191)
T d1uf9a_ 5 IIGITGNIGSGK 16 (191)
T ss_dssp EEEEEECTTSCH
T ss_pred EEEEECCCCCCH
Confidence 467778888886
No 3
>d1woqa2 c.55.1.10 (A:140-263) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]}
Probab=7.76 E-value=40 Score=18.81 Aligned_cols=14 Identities=7% Similarity=0.204 Sum_probs=10.6
Q ss_pred eEeecceecchhhh
Q 035132 2 NKSVDSTLGAGAYI 15 (72)
Q Consensus 2 ~l~vG~~IGsGIF~ 15 (72)
++.+|+=||+||++
T Consensus 7 ~ltlGTGiG~gii~ 20 (124)
T d1woqa2 7 VITLGTGIGSAFIF 20 (124)
T ss_dssp EEEESSSEEEEEEE
T ss_pred EEEEcCCeeEEEEE
Confidence 56788888888854
No 4
>d1jboa_ a.1.1.3 (A:) Phycocyanin alpha subunit {Synechococcus elongatus [TaxId: 32046]}
Probab=7.55 E-value=22 Score=21.70 Aligned_cols=18 Identities=11% Similarity=-0.025 Sum_probs=12.5
Q ss_pred CcHHHHHHHHHHHhhhcC
Q 035132 55 AICWECLSLFIHMCWRRC 72 (72)
Q Consensus 55 Gg~~~~~~~~~~~~~~~~ 72 (72)
|..|-+-.....+|||.|
T Consensus 71 G~~y~~~~~r~~~C~RD~ 88 (162)
T d1jboa_ 71 GSQYASTPEGKAKCARDI 88 (162)
T ss_dssp STTSSSSHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHH
Confidence 444555677788999964
No 5
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=5.86 E-value=77 Score=18.55 Aligned_cols=12 Identities=17% Similarity=0.401 Sum_probs=8.4
Q ss_pred eEeecceecchh
Q 035132 2 NKSVDSTLGAGA 13 (72)
Q Consensus 2 ~l~vG~~IGsGI 13 (72)
.+++.+.||||=
T Consensus 5 iIgitG~igSGK 16 (208)
T d1vhta_ 5 IVALTGGIGSGK 16 (208)
T ss_dssp EEEEECCTTSCH
T ss_pred EEEEECCCcCCH
Confidence 356777788884
No 6
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=5.58 E-value=73 Score=17.99 Aligned_cols=8 Identities=38% Similarity=0.700 Sum_probs=5.5
Q ss_pred ceecchhh
Q 035132 7 STLGAGAY 14 (72)
Q Consensus 7 ~~IGsGIF 14 (72)
.+||+||.
T Consensus 4 ~VIGaGi~ 11 (246)
T d1kifa1 4 VVIGAGVI 11 (246)
T ss_dssp EEECCSHH
T ss_pred EEECchHH
Confidence 36788875
No 7
>d1q20a_ c.37.1.5 (A:) Cholesterol sulfotransferase sult2b1b {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.48 E-value=79 Score=19.39 Aligned_cols=13 Identities=15% Similarity=0.353 Sum_probs=9.4
Q ss_pred CCCCCcHHHHHHHHH
Q 035132 51 CKSLAICWECLSLFI 65 (72)
Q Consensus 51 ~P~~Gg~~~~~~~~~ 65 (72)
+|++|..| ++..+
T Consensus 51 yPKSGtTW--l~~iL 63 (294)
T d1q20a_ 51 YPKSGTTW--MIEII 63 (294)
T ss_dssp STTSSHHH--HHHHH
T ss_pred CCCChHHH--HHHHH
Confidence 99999986 44444
No 8
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=5.48 E-value=70 Score=18.01 Aligned_cols=12 Identities=17% Similarity=0.614 Sum_probs=0.0
Q ss_pred CeEeecceecch
Q 035132 1 MNKSVDSTLGAG 12 (72)
Q Consensus 1 ~~l~vG~~IGsG 12 (72)
+.+++-+.+|||
T Consensus 10 ~~I~ieG~~GsG 21 (197)
T d2vp4a1 10 FTVLIEGNIGSG 21 (197)
T ss_dssp EEEEEECSTTSC
T ss_pred eEEEEECCCCCC
No 9
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=5.42 E-value=72 Score=17.51 Aligned_cols=12 Identities=17% Similarity=0.291 Sum_probs=0.0
Q ss_pred CeEeecceecch
Q 035132 1 MNKSVDSTLGAG 12 (72)
Q Consensus 1 ~~l~vG~~IGsG 12 (72)
+.+++.+-.|||
T Consensus 23 ~iIgI~G~~GSG 34 (198)
T d1rz3a_ 23 LVLGIDGLSRSG 34 (198)
T ss_dssp EEEEEEECTTSS
T ss_pred EEEEEECCCCCC
No 10
>d1alla_ a.1.1.3 (A:) Allophycocyanin alpha subunit {Spirulina platensis [TaxId: 118562]}
Probab=5.37 E-value=51 Score=19.73 Aligned_cols=13 Identities=15% Similarity=0.143 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhcC
Q 035132 60 CLSLFIHMCWRRC 72 (72)
Q Consensus 60 ~~~~~~~~~~~~~ 72 (72)
|...-..+|||.|
T Consensus 72 y~~~r~~~C~RD~ 84 (160)
T d1alla_ 72 YGADMTATCLRDL 84 (160)
T ss_dssp CSHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHH
Done!