Query 035136
Match_columns 72
No_of_seqs 149 out of 1010
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 15:37:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i0o_A Ser/Thr phosphatase; be 99.8 6.4E-21 2.2E-25 130.6 5.5 71 1-71 2-72 (304)
2 2p8e_A PPM1B beta isoform vari 99.8 1.2E-20 4E-25 129.6 4.2 71 1-71 3-76 (307)
3 1a6q_A Phosphatase 2C; catalyt 99.8 2.3E-20 7.8E-25 132.5 4.4 71 1-71 1-74 (382)
4 2isn_A NYSGXRC-8828Z, phosphat 99.6 5E-16 1.7E-20 109.5 4.1 53 19-71 10-64 (364)
5 3qn1_B Protein phosphatase 2C 99.5 1.6E-15 5.5E-20 105.5 2.6 52 20-71 12-83 (337)
6 2i44_A Serine-threonine phosph 99.5 3.6E-14 1.2E-18 97.3 4.6 52 20-71 20-74 (324)
7 3kdj_B Protein phosphatase 2C 99.5 3.5E-14 1.2E-18 97.6 3.8 51 21-71 8-73 (316)
8 2j4o_A Mitogen-activated prote 99.4 8.6E-14 3E-18 99.0 4.1 52 19-71 24-83 (401)
9 2iq1_A Protein phosphatase 2C 99.3 1.6E-12 5.4E-17 87.6 3.8 51 19-70 5-55 (274)
10 3d8k_A PP2C, protein phosphata 99.3 2E-13 7E-18 96.7 -1.0 54 18-71 9-69 (377)
11 2pnq_A [pyruvate dehydrogenase 99.2 4.7E-12 1.6E-16 92.0 4.3 44 28-71 44-87 (467)
12 2irm_A Mitogen-activated prote 99.2 6.4E-12 2.2E-16 87.9 4.6 44 27-71 25-71 (358)
13 2pk0_A Serine/threonine protei 99.1 3.8E-11 1.3E-15 79.0 4.3 50 20-70 4-54 (250)
14 4da1_A Protein phosphatase 1K, 99.1 2.8E-11 9.5E-16 85.6 3.4 49 22-71 122-170 (389)
15 1txo_A Putative bacterial enzy 99.1 3.4E-11 1.2E-15 78.7 3.3 44 21-70 4-48 (237)
16 2j82_A TPPHA, protein serine-t 99.0 2.5E-10 8.6E-15 74.5 4.3 46 22-70 1-47 (240)
17 2jfr_A Ser-Thr phosphatase MSP 98.9 7.6E-10 2.6E-14 72.1 3.2 44 21-70 5-51 (234)
18 3rnr_A Stage II sporulation E 96.4 0.00094 3.2E-08 43.0 1.4 23 48-70 8-30 (211)
19 3t91_A Stage II sporulation pr 37.5 73 0.0025 19.8 5.2 43 19-62 5-48 (242)
20 2b7l_A Glycerol-3-phosphate cy 27.7 30 0.001 19.8 1.7 13 50-62 4-17 (132)
21 3out_A Glutamate racemase; str 27.3 43 0.0015 22.2 2.6 19 52-70 9-28 (268)
22 1u5x_A Tumor necrosis factor l 24.5 26 0.00089 21.1 1.0 25 32-56 107-138 (140)
No 1
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=99.82 E-value=6.4e-21 Score=130.58 Aligned_cols=71 Identities=49% Similarity=0.741 Sum_probs=66.4
Q ss_pred CCCCCCCcceeeeeecCCCCceEEEEEcccccccccccceeEeccCCCCeeEEEEecCCCcHHHHHHHhhc
Q 035136 1 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 1 mg~~L~~p~~~k~~~~~~~~~~~~g~~s~~G~R~~mED~~~~~~~~~~~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
||++|++|.++|.++.+++..+.+|.++++|+|+.|||++.+..++.....+|+|||||||..+|+|++++
T Consensus 2 mg~~l~~p~~~~~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~ 72 (304)
T 2i0o_A 2 LGAYLSEPLTTKDSSDESNEFLASGSSSMQGWRISQEDAHNCILNFDDQCSFFAVYDGHGGAEVAQYCSLH 72 (304)
T ss_dssp CGGGTTCCCEEEEEEEEECSSEEEEEEEEEESSSCCCEEEEEEEEEETTEEEEEEEECSSCSHHHHHHHHH
T ss_pred cccccCCCcccccccccCCCceEEEEeecCCCCCCccCEEEEEeccCCCeEEEEEEcCCCCHHHHHHHHHH
Confidence 99999999999999999899999999999999999999999877666688999999999999999999864
No 2
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.81 E-value=1.2e-20 Score=129.62 Aligned_cols=71 Identities=49% Similarity=0.858 Sum_probs=62.5
Q ss_pred CCCCCCCcceeeeeecCCCCceEEEEEcccccccccccceeEeccCCC---CeeEEEEecCCCcHHHHHHHhhc
Q 035136 1 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDS---STSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 1 mg~~L~~p~~~k~~~~~~~~~~~~g~~s~~G~R~~mED~~~~~~~~~~---~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
||++|++|.++|.++.+....++||.++++|+|+.|||++.+..+++. ...||+|||||||..+|+|++++
T Consensus 3 mg~~l~~p~~~~~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~ 76 (307)
T 2p8e_A 3 LGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTH 76 (307)
T ss_dssp ---CCSSCEEEEEEEEEEETTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHH
T ss_pred cccccCCCccccccccCCCCCeeEEEEecCCCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHH
Confidence 999999999999999998899999999999999999999999776543 67999999999999999999864
No 3
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.80 E-value=2.3e-20 Score=132.53 Aligned_cols=71 Identities=55% Similarity=0.892 Sum_probs=64.6
Q ss_pred CCCCCCCcceeeeeecCCCCceEEEEEcccccccccccceeEeccCCC---CeeEEEEecCCCcHHHHHHHhhc
Q 035136 1 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDS---STSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 1 mg~~L~~p~~~k~~~~~~~~~~~~g~~s~~G~R~~mED~~~~~~~~~~---~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
||+||++|.++|.++.++...++||.++++|+|+.|||++.+..+++. ...||+|||||||..+|+|++++
T Consensus 1 mg~~l~~p~~~k~~~~~~~~~l~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~ 74 (382)
T 1a6q_A 1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEH 74 (382)
T ss_dssp -CCCCSSCEEEEEEEEEEETTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHH
T ss_pred CCccccCCccccccccCCCCceEEEEEecCCCCCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHH
Confidence 999999999999999988899999999999999999999999776543 67999999999999999999864
No 4
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.59 E-value=5e-16 Score=109.51 Aligned_cols=53 Identities=23% Similarity=0.240 Sum_probs=45.9
Q ss_pred CCceEEEEEcccccccccccceeEeccCC--CCeeEEEEecCCCcHHHHHHHhhc
Q 035136 19 NENVRYGLSSMQGWRATMEDAHAAYPDLD--SSTSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 19 ~~~~~~g~~s~~G~R~~mED~~~~~~~~~--~~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
...+.++.++++|+|++|||++++..++. .+..||||||||||..||+||+++
T Consensus 10 ~~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~ 64 (364)
T 2isn_A 10 EWYTTTVAATMLGRRPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKH 64 (364)
T ss_dssp ETTEEEEEEEECTTSSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHH
T ss_pred CCceEEEEEEcCCCCCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHH
Confidence 34488999999999999999999987663 478999999999999999999875
No 5
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.54 E-value=1.6e-15 Score=105.45 Aligned_cols=52 Identities=40% Similarity=0.601 Sum_probs=44.8
Q ss_pred CceEEEEEcccccccccccceeEeccCC--------------------CCeeEEEEecCCCcHHHHHHHhhc
Q 035136 20 ENVRYGLSSMQGWRATMEDAHAAYPDLD--------------------SSTSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 20 ~~~~~g~~s~~G~R~~mED~~~~~~~~~--------------------~~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
....||.++++|||+.|||+|.+..++. .+..||||||||||..+++|++++
T Consensus 12 ~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~ 83 (337)
T 3qn1_B 12 CIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDR 83 (337)
T ss_dssp CSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHH
T ss_pred ccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHH
Confidence 3456999999999999999999976632 167899999999999999999874
No 6
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.47 E-value=3.6e-14 Score=97.34 Aligned_cols=52 Identities=25% Similarity=0.474 Sum_probs=45.9
Q ss_pred CceEEEEEcccccccccccceeEeccC---CCCeeEEEEecCCCcHHHHHHHhhc
Q 035136 20 ENVRYGLSSMQGWRATMEDAHAAYPDL---DSSTSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 20 ~~~~~g~~s~~G~R~~mED~~~~~~~~---~~~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
..+.++.++++|+|++|||++.+..+. ..+..||+|||||||..+++|++++
T Consensus 20 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~ 74 (324)
T 2i44_A 20 PAFDAAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDL 74 (324)
T ss_dssp TTEEEEEEEECTTSSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHH
T ss_pred cceEEEEEECCCCCCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHH
Confidence 568899999999999999999998654 3478999999999999999999864
No 7
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.45 E-value=3.5e-14 Score=97.63 Aligned_cols=51 Identities=43% Similarity=0.703 Sum_probs=43.5
Q ss_pred ceEEEEEcccccccccccceeEeccCC---------------CCeeEEEEecCCCcHHHHHHHhhc
Q 035136 21 NVRYGLSSMQGWRATMEDAHAAYPDLD---------------SSTSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 21 ~~~~g~~s~~G~R~~mED~~~~~~~~~---------------~~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
...||+++++|+|+.|||++.+..++. ....||+|||||||..+++|++++
T Consensus 8 ~~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~ 73 (316)
T 3kdj_B 8 VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRER 73 (316)
T ss_dssp --CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHH
T ss_pred CCeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHH
Confidence 357999999999999999999977642 267899999999999999999864
No 8
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.42 E-value=8.6e-14 Score=99.02 Aligned_cols=52 Identities=17% Similarity=0.346 Sum_probs=45.1
Q ss_pred CCceEEEEEcccccccc--------cccceeEeccCCCCeeEEEEecCCCcHHHHHHHhhc
Q 035136 19 NENVRYGLSSMQGWRAT--------MEDAHAAYPDLDSSTSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 19 ~~~~~~g~~s~~G~R~~--------mED~~~~~~~~~~~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
...+.+|++++||||+. |||+|++.. ...+..||||||||||..||+|++++
T Consensus 24 ~~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~-~~~~~~lf~V~DGhGG~~aa~~as~~ 83 (401)
T 2j4o_A 24 CHLSGVGSASNRSYSADGKGTESHPPEDSWLKFR-SENNCFLYGVFNGYDGNRVTNFVAQR 83 (401)
T ss_dssp CTTEEEEEECCEEECSSSSCEECCCCCEEEEEEE-ETTTEEEEEEEEEESSSHHHHHHHHH
T ss_pred cccCceeEEecccccccccccCCCCCCceEEEec-CCCCeEEEEEEcCCCCHHHHHHHHHH
Confidence 45789999999999994 999999864 24578999999999999999999874
No 9
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.29 E-value=1.6e-12 Score=87.61 Aligned_cols=51 Identities=29% Similarity=0.373 Sum_probs=43.9
Q ss_pred CCceEEEEEcccccccccccceeEeccCCCCeeEEEEecCCCcHHHHHHHhh
Q 035136 19 NENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKYMRSVISE 70 (72)
Q Consensus 19 ~~~~~~g~~s~~G~R~~mED~~~~~~~~~~~~~~fgVfDGHgG~~~a~~~~~ 70 (72)
.....+|.++.+|+|+.|||++.+.. +.++..+|+|||||||..+|+++++
T Consensus 5 ~~~~~~g~~s~~G~R~~nED~~~~~~-~~~~~~l~~V~DG~GG~~~a~~as~ 55 (274)
T 2iq1_A 5 ISLENVGCASQIGKRKENEDRFDFAQ-LTDEVLYFAVYDGHGGPAAADFCHT 55 (274)
T ss_dssp CCGGGCEEEEECCSSSSCCEEEEEEE-CSSSEEEEEEEEEESSTHHHHHHHH
T ss_pred ccCCeEEEEecccCCCCccceEEEee-CCCCeEEEEEECCCCCHHHHHHHHH
Confidence 34467899999999999999998864 3457899999999999999999876
No 10
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.28 E-value=2e-13 Score=96.72 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=42.5
Q ss_pred CCCceEEEEEcccccccccccce-----eEeccC--CCCeeEEEEecCCCcHHHHHHHhhc
Q 035136 18 QNENVRYGLSSMQGWRATMEDAH-----AAYPDL--DSSTSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 18 ~~~~~~~g~~s~~G~R~~mED~~-----~~~~~~--~~~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
+...+.++.++++|+|++|||++ ++...+ ..+..||||||||||..+|+|++++
T Consensus 9 ~~~~~~~~~~s~~G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~ 69 (377)
T 3d8k_A 9 EEGRTVCASATSRNRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQN 69 (377)
T ss_dssp THHHHHHHHTTTCEEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHH
T ss_pred cCCcEEEEEEEccCCCCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHH
Confidence 45567889999999999997766 343333 3578999999999999999999874
No 11
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.24 E-value=4.7e-12 Score=92.04 Aligned_cols=44 Identities=30% Similarity=0.392 Sum_probs=38.2
Q ss_pred cccccccccccceeEeccCCCCeeEEEEecCCCcHHHHHHHhhc
Q 035136 28 SMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 28 s~~G~R~~mED~~~~~~~~~~~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
...+.|..|||++.+..++.....||||||||||..||+|++++
T Consensus 44 ~~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~ 87 (467)
T 2pnq_A 44 NRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSER 87 (467)
T ss_dssp EEECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHH
T ss_pred eccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHH
Confidence 34557999999999877776678999999999999999999875
No 12
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.23 E-value=6.4e-12 Score=87.87 Aligned_cols=44 Identities=20% Similarity=0.278 Sum_probs=37.9
Q ss_pred Ecccccccc---cccceeEeccCCCCeeEEEEecCCCcHHHHHHHhhc
Q 035136 27 SSMQGWRAT---MEDAHAAYPDLDSSTSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 27 ~s~~G~R~~---mED~~~~~~~~~~~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
++.+|+|+. |||++++.. ...+..||||||||||..||+|++++
T Consensus 25 ~~~~G~r~~~~~nED~~~~~~-~~~~~~lf~V~DGhGG~~aa~~as~~ 71 (358)
T 2irm_A 25 YKDDGRRCEGYESRDKKCLCI-SDNNTSLYAILSGHNGVTVAENALQE 71 (358)
T ss_dssp ECSSSCEEECSSCCEEEEEEE-CSSSEEEEEEEEEESCSHHHHHHHHH
T ss_pred eecCCCCCCCCCCCceEEEEE-CCCCEEEEEEEcCCCCHHHHHHHHHH
Confidence 667999985 999998864 34578999999999999999999864
No 13
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.13 E-value=3.8e-11 Score=79.02 Aligned_cols=50 Identities=20% Similarity=0.291 Sum_probs=42.5
Q ss_pred CceEEEEEccccc-ccccccceeEeccCCCCeeEEEEecCCCcHHHHHHHhh
Q 035136 20 ENVRYGLSSMQGW-RATMEDAHAAYPDLDSSTSFFGVYDGHGGKYMRSVISE 70 (72)
Q Consensus 20 ~~~~~g~~s~~G~-R~~mED~~~~~~~~~~~~~~fgVfDGHgG~~~a~~~~~ 70 (72)
..+.++..+.+|+ |+.|||++.+.... .+..+|+|||||||..+++++++
T Consensus 4 ~~~~~~~~s~~G~~r~~neD~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~ 54 (250)
T 2pk0_A 4 KYMEISLLTDIGQRRSNNQDFINQFENK-AGVPLIILADGMGGHRAGNIASE 54 (250)
T ss_dssp CCEEEEEEEECCTTCSCCCEEEEEEECT-TCCEEEEEEEEECTTTHHHHHHH
T ss_pred ceEEEEEecCCCCCCCcCCCceEeccCC-CCcEEEEEEeCCCCcHHHHHHHH
Confidence 4578999999999 99999999986543 46799999999999988877764
No 14
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.12 E-value=2.8e-11 Score=85.62 Aligned_cols=49 Identities=31% Similarity=0.426 Sum_probs=42.1
Q ss_pred eEEEEEcccccccccccceeEeccCCCCeeEEEEecCCCcHHHHHHHhhc
Q 035136 22 VRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKYMRSVISEF 71 (72)
Q Consensus 22 ~~~g~~s~~G~R~~mED~~~~~~~~~~~~~~fgVfDGHgG~~~a~~~~~~ 71 (72)
..+|.++.+|+|+.|||++.+.. +..+..+|+|||||||..++++++++
T Consensus 122 ~~~g~~s~~G~R~~NED~~~~~~-~~~~~~l~~VaDG~GG~~~g~~as~~ 170 (389)
T 4da1_A 122 ENVGCASQIGKRKENEDRFDFAQ-LTDEVLYFAVYDGHGGPAAADFCHTH 170 (389)
T ss_dssp GGCEEEEECTTSSSCCEEEEEEE-CSSSEEEEEEEEEESSTHHHHHHHHH
T ss_pred eeEEEecCCCCCCCCcceeeeee-cCCCEEEEEEEECCCCHHHHHHHHHH
Confidence 45678999999999999998853 34678999999999999999999863
No 15
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.11 E-value=3.4e-11 Score=78.70 Aligned_cols=44 Identities=34% Similarity=0.473 Sum_probs=38.8
Q ss_pred ceEEEEEccccc-ccccccceeEeccCCCCeeEEEEecCCCcHHHHHHHhh
Q 035136 21 NVRYGLSSMQGW-RATMEDAHAAYPDLDSSTSFFGVYDGHGGKYMRSVISE 70 (72)
Q Consensus 21 ~~~~g~~s~~G~-R~~mED~~~~~~~~~~~~~~fgVfDGHgG~~~a~~~~~ 70 (72)
.+.++..+.+|+ |+.|||++.+ ...+|+|||||||..+++++++
T Consensus 4 ~~~~~~~s~~G~~r~~nED~~~~------~~~~~~V~DG~Gg~~~~~~as~ 48 (237)
T 1txo_A 4 VLRYAARSDRGLVRANNEDSVYA------GARLLALADGMGGHAAGEVASQ 48 (237)
T ss_dssp EEEEEEEEECCSSCSSCCEEEEE------CSSEEEEEEEECTTTHHHHHHH
T ss_pred EEEEEEecCCCCCCCcCCCcccc------CCCEEEEEeCCCCcHHHHHHHH
Confidence 478999999997 9999999976 3479999999999999998875
No 16
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.01 E-value=2.5e-10 Score=74.54 Aligned_cols=46 Identities=26% Similarity=0.261 Sum_probs=34.0
Q ss_pred eEEEEEccccc-ccccccceeEeccCCCCeeEEEEecCCCcHHHHHHHhh
Q 035136 22 VRYGLSSMQGW-RATMEDAHAAYPDLDSSTSFFGVYDGHGGKYMRSVISE 70 (72)
Q Consensus 22 ~~~g~~s~~G~-R~~mED~~~~~~~~~~~~~~fgVfDGHgG~~~a~~~~~ 70 (72)
++++..+.+|+ |+.|||++ +... +... +|+|||||||..+++++++
T Consensus 1 ~~~~~~s~~G~~r~~neD~~-~~~~-~~~~-~~~V~DG~Gg~~~~~~as~ 47 (240)
T 2j82_A 1 MDVAGLTDCGLIRKSNQDAF-YIDE-KHQR-FFIVADGMGGHAGGEEASR 47 (240)
T ss_dssp CEEEEEEECCSSCSSCCEEE-EECT-TTCC-EEEEEEBC---CHHHHHHH
T ss_pred CeEEEeCCCCCCCCcCCCcc-EecC-CCCe-EEEEEcCCCCchHHHHHHH
Confidence 46899999999 99999999 6543 2344 9999999999877776654
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=98.89 E-value=7.6e-10 Score=72.13 Aligned_cols=44 Identities=23% Similarity=0.256 Sum_probs=37.9
Q ss_pred ceEEEEEccccc-ccccccceeEeccCCCCeeEEEEecCCCc--HHHHHHHhh
Q 035136 21 NVRYGLSSMQGW-RATMEDAHAAYPDLDSSTSFFGVYDGHGG--KYMRSVISE 70 (72)
Q Consensus 21 ~~~~g~~s~~G~-R~~mED~~~~~~~~~~~~~~fgVfDGHgG--~~~a~~~~~ 70 (72)
.+.++..+.+|+ |+.|||++.+ +..+|+||||||| ..||+++.+
T Consensus 5 ~~~~~~~s~~G~~r~~neD~~~~------~~~~~~V~DG~Gg~G~~as~~~~~ 51 (234)
T 2jfr_A 5 VLSAATATDQGPVRENNQDACLA------DGILYAVADGFGARGHHASATALK 51 (234)
T ss_dssp EEEEEEEEECCSSCSSCCEEEEE------ETTEEEEEEEESTTHHHHHHHHHH
T ss_pred eEEEEEecCCCCCCCcCCCccee------CCcEEEEEeCCCccHHHHHHHHHH
Confidence 578999999999 9999999965 4589999999995 488888764
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=96.44 E-value=0.00094 Score=42.96 Aligned_cols=23 Identities=22% Similarity=0.355 Sum_probs=18.3
Q ss_pred CCeeEEEEecCCCcHHHHHHHhh
Q 035136 48 SSTSFFGVYDGHGGKYMRSVISE 70 (72)
Q Consensus 48 ~~~~~fgVfDGHgG~~~a~~~~~ 70 (72)
++..+|+|+|||||..+++.+++
T Consensus 8 ~~~~l~~VaDG~GG~~~g~~AS~ 30 (211)
T 3rnr_A 8 GDKAYCVVVDGMGGMIRGDEAAQ 30 (211)
T ss_dssp TTEEEEEEEEECTTSTTHHHHHH
T ss_pred CCccEEEEEeCCcCcHHHHHHHH
Confidence 46789999999998777666653
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=37.49 E-value=73 Score=19.78 Aligned_cols=43 Identities=16% Similarity=0.131 Sum_probs=27.6
Q ss_pred CCceEEEEEcc-cccccccccceeEeccCCCCeeEEEEecCCCcH
Q 035136 19 NENVRYGLSSM-QGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGK 62 (72)
Q Consensus 19 ~~~~~~g~~s~-~G~R~~mED~~~~~~~~~~~~~~fgVfDGHgG~ 62 (72)
...+.+++++. +..+.--.|.|.+... +....+|.|.||-|+-
T Consensus 5 ~~~i~~~~~~~~~p~~~v~GD~y~~~~~-~~~~~~~~vaDg~G~G 48 (242)
T 3t91_A 5 SYRVSTGAAHAAKGGGLVSGDSYSMMEL-GARKYAAAISDGMGNG 48 (242)
T ss_dssp CCEEEEEEEEECTTSCSCCSCEEEEEEE-TTTEEEEEEECC----
T ss_pred eEEEEEEeehhcCCccccCCcEEEEEEe-CCCeEEEEEEeeCCCC
Confidence 45677888776 3346678899887542 4456779999987754
No 20
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=27.67 E-value=30 Score=19.82 Aligned_cols=13 Identities=38% Similarity=0.641 Sum_probs=10.1
Q ss_pred eeEEEEecC-CCcH
Q 035136 50 TSFFGVYDG-HGGK 62 (72)
Q Consensus 50 ~~~fgVfDG-HgG~ 62 (72)
..+.|.||| |.|.
T Consensus 4 ~~~~G~FDp~H~GH 17 (132)
T 2b7l_A 4 VITYGTYDLLHYGH 17 (132)
T ss_dssp EEEEECCCSCCHHH
T ss_pred EEEeeecCcCCHHH
Confidence 357889998 8776
No 21
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=27.27 E-value=43 Score=22.17 Aligned_cols=19 Identities=32% Similarity=0.538 Sum_probs=15.7
Q ss_pred EEEEec-CCCcHHHHHHHhh
Q 035136 52 FFGVYD-GHGGKYMRSVISE 70 (72)
Q Consensus 52 ~fgVfD-GHgG~~~a~~~~~ 70 (72)
-.|||| |=||-.+++-+.+
T Consensus 9 pIgvfDSGvGGLtv~~~i~~ 28 (268)
T 3out_A 9 PIGVFDSGIGGLTIVKNLMS 28 (268)
T ss_dssp CEEEEESSSTTHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHH
Confidence 479999 9999999887654
No 22
>1u5x_A Tumor necrosis factor ligand superfamily member 1; TNFSF, cytokine, jelly-roll, trimer, hormone-growth factor C; 1.80A {Mus musculus} SCOP: b.22.1.1 PDB: 1u5y_A 1u5z_A 3k48_A 1xu1_A 1xu2_A
Probab=24.49 E-value=26 Score=21.05 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=15.5
Q ss_pred cccccccceeEec-------cCCCCeeEEEEe
Q 035136 32 WRATMEDAHAAYP-------DLDSSTSFFGVY 56 (72)
Q Consensus 32 ~R~~mED~~~~~~-------~~~~~~~~fgVf 56 (72)
.+....|+..+.. ++.+...|||+|
T Consensus 107 f~L~~GD~l~v~v~~~~~~v~~~~~~TfFG~f 138 (140)
T 1u5x_A 107 FHLHQGDIITVKIPRANAKLSLSPHGTFLGFV 138 (140)
T ss_dssp EEECTTCEEEEEESSTTCCBCCCTTTSEEEEE
T ss_pred EEeCCCCEEEEEecCCCcEEecCCCCEEEEEE
Confidence 3445566666533 223578999997
Done!