Your job contains 1 sequence.
>035140
MNFRHTLYPSYKNNRPPTPDTMVQGLQYLKASIKAMSIKVIEIQVVSPNKDSQILSHSLC
LLRIAPRGFELV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035140
(72 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083775 - symbol:AT3G52050 species:3702 "Arabi... 211 4.2e-23 2
TIGR_CMR|ECH_0080 - symbol:ECH_0080 "DNA polymerase I" sp... 107 8.1e-05 1
TIGR_CMR|GSU_0541 - symbol:GSU_0541 "DNA polymerase I" sp... 90 0.00022 2
>TAIR|locus:2083775 [details] [associations]
symbol:AT3G52050 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA]
InterPro:IPR002421 InterPro:IPR008918 InterPro:IPR020045
InterPro:IPR020046 Pfam:PF01367 Pfam:PF02739 SMART:SM00279
SMART:SM00475 EMBL:CP002686 GO:GO:0003677 GO:GO:0008152
EMBL:AL049711 GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807
IPI:IPI00846770 RefSeq:NP_001078270.1 UniGene:At.50269
ProteinModelPortal:A8MQG8 SMR:A8MQG8 STRING:A8MQG8 PaxDb:A8MQG8
PRIDE:A8MQG8 EnsemblPlants:AT3G52050.3 GeneID:824368
KEGG:ath:AT3G52050 TAIR:At3g52050 HOGENOM:HOG000015113 OMA:HDGVPYG
PhylomeDB:A8MQG8 ProtClustDB:CLSN2680900 Genevestigator:A8MQG8
Uniprot:A8MQG8
Length = 448
Score = 211 (79.3 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 39/43 (90%), Positives = 43/43 (100%)
Query: 1 MNFRHTLYPSYKNNRPPTPDTMVQGLQYLKASIKAMSIKVIEI 43
MNFRHTLYP+YK+NRPPTPDT+VQGLQYLKASIKAMSIKVIE+
Sbjct: 202 MNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEV 244
Score = 83 (34.3 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 42 EIQVVSPNKDS-QILSHSLCLLRIAPRGFEL 71
+++VVSP+KD QILS SL LLR+ PRG E+
Sbjct: 266 KVRVVSPDKDFFQILSPSLRLLRLTPRGSEM 296
>TIGR_CMR|ECH_0080 [details] [associations]
symbol:ECH_0080 "DNA polymerase I" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR003583 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447 SMART:SM00278
SMART:SM00279 SMART:SM00475 SMART:SM00482 GO:GO:0003677
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 GO:GO:0003887 GO:GO:0008409 eggNOG:COG0258
SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK TIGRFAMs:TIGR00593
HOGENOM:HOG000020999 RefSeq:YP_506910.1 ProteinModelPortal:Q2GI23
STRING:Q2GI23 GeneID:3927608 KEGG:ech:ECH_0080 PATRIC:20575721
BioCyc:ECHA205920:GJNR-80-MONOMER Uniprot:Q2GI23
Length = 944
Score = 107 (42.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 25/64 (39%), Positives = 33/64 (51%)
Query: 2 NFRHTLYPSYKNNRPPTPDTMVQGLQYLKASIKAMSIKVIEIQVVSPNKDSQI--LSHSL 59
NFRH +YP YK NRP PD ++ L+ ++ A +I E VV D I LS
Sbjct: 63 NFRHNIYPEYKGNRPKLPDDLIPQFSLLREAVNAFNIASEE--VVGYEADDVIATLSKKY 120
Query: 60 CLLR 63
C L+
Sbjct: 121 CKLQ 124
>TIGR_CMR|GSU_0541 [details] [associations]
symbol:GSU_0541 "DNA polymerase I" species:243231
"Geobacter sulfurreducens PCA" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0006308 "DNA catabolic process" evidence=ISS]
[GO:0008409 "5'-3' exonuclease activity" evidence=ISS]
InterPro:IPR001098 InterPro:IPR002298 InterPro:IPR002421
InterPro:IPR002562 InterPro:IPR003583 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00278 SMART:SM00279 SMART:SM00474 SMART:SM00475
SMART:SM00482 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003887 GO:GO:0008409
SUPFAM:SSF47807 HOGENOM:HOG000020998 KO:K02335 OMA:EQRRYAK
ProtClustDB:PRK05755 TIGRFAMs:TIGR00593 HSSP:P00582
RefSeq:NP_951599.1 ProteinModelPortal:Q74FR5 SMR:Q74FR5
GeneID:2685802 KEGG:gsu:GSU0541 PATRIC:22023837
BioCyc:GSUL243231:GH27-525-MONOMER Uniprot:Q74FR5
Length = 891
Score = 90 (36.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 3 FRHTLYPSYKNNRPPTPDTMVQGLQYLKASIKAMSIKVIEIQ 44
FR +YP YK NR PD +V + +K ++A SI V+E++
Sbjct: 66 FRTEIYPDYKANRAAMPDDLVPQIGPIKEMVRAFSIPVLELE 107
Score = 36 (17.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 51 DSQILSHSLCLLRIAPRGFE 70
D+ L H L L R+A G E
Sbjct: 465 DAAWLLHRLFLPRVAEAGME 484
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 72 72 0.00091 102 3 11 22 0.46 28
29 0.43 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 470 (50 KB)
Total size of DFA: 84 KB (2065 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.41u 0.11s 9.52t Elapsed: 00:00:01
Total cpu time: 9.41u 0.11s 9.52t Elapsed: 00:00:01
Start: Fri May 10 05:54:36 2013 End: Fri May 10 05:54:37 2013