Query 035150
Match_columns 72
No_of_seqs 21 out of 23
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 15:48:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035150.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035150hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d0c_A Dihydrodipicolinate syn 73.6 3.7 0.00013 29.4 3.9 40 11-56 109-148 (314)
2 1xky_A Dihydrodipicolinate syn 60.5 12 0.00042 26.5 4.3 37 10-46 109-145 (301)
3 4az3_B Lysosomal protective pr 58.1 5.8 0.0002 25.3 2.1 22 31-52 55-76 (155)
4 3fkr_A L-2-keto-3-deoxyarabona 55.7 11 0.00039 26.8 3.5 38 8-47 104-145 (309)
5 2vc6_A MOSA, dihydrodipicolina 55.6 15 0.0005 25.8 4.0 37 10-46 97-133 (292)
6 1o5k_A DHDPS, dihydrodipicolin 52.6 19 0.00065 25.5 4.3 36 11-46 110-145 (306)
7 3eb2_A Putative dihydrodipicol 51.3 19 0.00066 25.4 4.1 36 11-46 102-137 (300)
8 2ojp_A DHDPS, dihydrodipicolin 51.0 28 0.00096 24.3 4.9 36 11-46 99-134 (292)
9 3l21_A DHDPS, dihydrodipicolin 50.7 21 0.00073 25.3 4.3 36 11-46 113-148 (304)
10 2yxg_A DHDPS, dihydrodipicolin 50.2 20 0.00069 25.0 4.0 36 11-46 98-133 (289)
11 2ehh_A DHDPS, dihydrodipicolin 49.4 21 0.00071 25.0 4.0 36 11-46 98-133 (294)
12 3cpr_A Dihydrodipicolinate syn 49.3 21 0.00071 25.3 4.0 36 11-46 114-149 (304)
13 3flu_A DHDPS, dihydrodipicolin 48.8 21 0.00073 25.1 4.0 37 9-46 104-140 (297)
14 3tak_A DHDPS, dihydrodipicolin 48.8 22 0.00074 24.9 4.0 36 11-46 99-134 (291)
15 2r91_A 2-keto-3-deoxy-(6-phosp 48.8 20 0.00068 25.0 3.8 36 11-46 93-129 (286)
16 3m5v_A DHDPS, dihydrodipicolin 48.8 22 0.00074 25.1 4.0 36 11-46 106-141 (301)
17 1f6k_A N-acetylneuraminate lya 48.5 19 0.00064 25.3 3.6 36 11-46 102-137 (293)
18 3qze_A DHDPS, dihydrodipicolin 48.2 22 0.00075 25.4 4.0 37 9-46 120-156 (314)
19 1w3i_A EDA, 2-keto-3-deoxy glu 48.0 23 0.0008 24.8 4.1 35 11-46 94-130 (293)
20 3si9_A DHDPS, dihydrodipicolin 47.8 22 0.00076 25.5 4.0 37 9-46 119-155 (315)
21 2r8w_A AGR_C_1641P; APC7498, d 46.8 21 0.00073 25.8 3.8 36 11-46 132-167 (332)
22 3s5o_A 4-hydroxy-2-oxoglutarat 46.5 30 0.001 24.5 4.5 36 10-46 111-149 (307)
23 3h5d_A DHDPS, dihydrodipicolin 46.5 28 0.00095 24.8 4.3 37 9-46 105-141 (311)
24 2v9d_A YAGE; dihydrodipicolini 45.9 28 0.00095 25.3 4.3 36 11-46 129-164 (343)
25 2hmc_A AGR_L_411P, dihydrodipi 45.8 26 0.00088 25.6 4.2 38 11-48 121-160 (344)
26 2rfg_A Dihydrodipicolinate syn 45.2 22 0.00077 25.0 3.6 36 11-46 98-133 (297)
27 2nuw_A 2-keto-3-deoxygluconate 45.2 28 0.00095 24.4 4.1 36 11-46 94-130 (288)
28 3e96_A Dihydrodipicolinate syn 44.4 19 0.00067 25.6 3.2 36 11-46 109-144 (316)
29 3daq_A DHDPS, dihydrodipicolin 44.2 24 0.00081 24.8 3.6 36 11-46 100-135 (292)
30 3na8_A Putative dihydrodipicol 42.6 26 0.00088 25.1 3.7 36 11-46 122-157 (315)
31 2wkj_A N-acetylneuraminate lya 41.0 28 0.00096 24.6 3.6 36 11-46 109-145 (303)
32 1gxs_B P-(S)-hydroxymandelonit 40.4 12 0.0004 24.2 1.4 17 36-52 63-79 (158)
33 1uhe_A Aspartate 1-decarboxyla 40.1 46 0.0016 21.6 4.2 23 2-24 50-72 (97)
34 3oug_A Aspartate 1-decarboxyla 39.7 23 0.00078 23.7 2.8 34 2-48 79-112 (114)
35 3ktb_A Arsenical resistance op 39.5 14 0.00049 23.9 1.8 22 37-60 73-94 (106)
36 3a5f_A Dihydrodipicolinate syn 39.4 21 0.00071 25.0 2.7 36 11-46 99-134 (291)
37 1whs_B Serine carboxypeptidase 39.2 13 0.00043 23.9 1.4 17 36-52 61-77 (153)
38 3b4u_A Dihydrodipicolinate syn 37.5 30 0.001 24.3 3.3 36 11-46 101-140 (294)
39 3ipz_A Monothiol glutaredoxin- 36.9 22 0.00075 21.0 2.2 34 16-49 50-83 (109)
40 3kgk_A Arsenical resistance op 36.9 17 0.00057 23.8 1.7 22 37-60 70-91 (110)
41 2ayi_A Aminopeptidase T; metal 36.8 72 0.0024 24.0 5.4 41 3-47 20-60 (408)
42 3l7v_A Putative uncharacterize 35.0 25 0.00084 26.0 2.6 42 8-54 64-105 (295)
43 1zjc_A Aminopeptidase AMPS; me 35.0 60 0.0021 24.5 4.8 41 3-47 23-63 (418)
44 1vc3_B L-aspartate-alpha-decar 32.6 28 0.00097 22.5 2.3 23 2-24 52-74 (96)
45 2a33_A Hypothetical protein; s 30.9 36 0.0012 23.4 2.8 23 26-48 122-148 (215)
46 3un7_A PBPA, penicillin-bindin 30.5 59 0.002 24.0 4.0 39 4-42 137-180 (462)
47 3hju_A Monoglyceride lipase; a 29.8 54 0.0019 20.7 3.3 21 32-52 239-259 (342)
48 3dkr_A Esterase D; alpha beta 29.1 61 0.0021 18.8 3.2 20 34-53 179-198 (251)
49 3pe6_A Monoglyceride lipase; a 28.8 63 0.0021 19.2 3.3 20 33-52 222-241 (303)
50 3rm3_A MGLP, thermostable mono 28.3 61 0.0021 19.6 3.2 21 32-52 198-218 (270)
51 4fbl_A LIPS lipolytic enzyme; 27.8 58 0.002 20.8 3.2 21 32-52 211-231 (281)
52 1ydh_A AT5G11950; structural g 27.1 58 0.002 22.5 3.3 22 27-48 119-144 (216)
53 1st7_A ACBP, acyl-COA-binding 26.0 62 0.0021 19.4 2.9 19 19-37 19-37 (86)
54 3plx_B Aspartate 1-decarboxyla 25.6 33 0.0011 22.5 1.7 23 2-24 51-73 (102)
55 1mj5_A 1,3,4,6-tetrachloro-1,4 25.6 73 0.0025 19.3 3.2 22 32-53 228-249 (302)
56 1jcu_A Conserved protein MTH16 25.4 56 0.0019 22.1 2.9 42 13-54 28-76 (208)
57 1hbk_A ACBP, acyl-COA binding 24.9 65 0.0022 19.4 2.9 19 19-37 22-40 (89)
58 3rhb_A ATGRXC5, glutaredoxin-C 24.4 61 0.0021 18.5 2.6 22 28-49 62-83 (113)
59 3qmx_A Glutaredoxin A, glutare 24.4 35 0.0012 19.9 1.5 34 16-49 43-77 (99)
60 3sbx_A Putative uncharacterize 24.3 71 0.0024 21.7 3.3 22 27-48 122-147 (189)
61 2qvb_A Haloalkane dehalogenase 24.2 71 0.0024 19.2 2.9 21 33-53 228-248 (297)
62 1k7j_A Protein YCIO, protein T 24.0 55 0.0019 22.0 2.6 31 24-54 47-77 (206)
63 3pnx_A Putative sulfurtransfer 23.8 21 0.0007 23.9 0.5 14 39-52 6-19 (160)
64 3epy_A Acyl-COA-binding domain 23.6 63 0.0022 19.7 2.7 18 20-37 23-40 (89)
65 3h8q_A Thioredoxin reductase 3 23.3 53 0.0018 19.2 2.2 34 16-49 44-80 (114)
66 3qit_A CURM TE, polyketide syn 22.8 41 0.0014 19.8 1.6 21 32-52 224-244 (286)
67 1zd9_A ADP-ribosylation factor 22.5 1.3E+02 0.0045 17.9 5.4 42 10-51 92-136 (188)
68 2nzw_A Alpha1,3-fucosyltransfe 22.0 37 0.0013 25.7 1.6 35 26-65 247-281 (371)
69 1upt_A ARL1, ADP-ribosylation 21.9 1.2E+02 0.0041 17.2 5.1 43 9-51 75-120 (171)
70 2cop_A Acyl-coenzyme A binding 21.9 77 0.0026 20.0 2.9 19 19-37 26-44 (109)
71 3qfe_A Putative dihydrodipicol 21.8 93 0.0032 22.2 3.6 36 9-46 108-146 (318)
72 2cb8_A Acyl-COA-binding protei 21.8 81 0.0028 19.0 2.9 19 19-37 20-38 (87)
73 3lub_A Putative creatinine ami 21.6 95 0.0032 21.6 3.6 23 26-48 98-120 (254)
74 2c45_A Aspartate 1-decarboxyla 21.4 54 0.0018 22.6 2.2 39 2-52 76-114 (139)
75 1eiw_A Hypothetical protein MT 21.3 1.6E+02 0.0055 18.4 4.9 42 3-47 34-75 (111)
76 1t4w_A CEP-1, C.elegans P53 tu 21.2 20 0.00067 26.1 -0.1 10 9-18 173-182 (196)
77 1rcu_A Conserved hypothetical 21.1 74 0.0025 21.7 2.9 21 26-48 131-151 (195)
78 3qua_A Putative uncharacterize 21.1 89 0.0031 21.4 3.3 22 27-48 131-156 (199)
79 1ksh_A ARF-like protein 2; sma 20.6 1.4E+02 0.0048 17.5 5.6 42 9-50 86-130 (186)
80 3i1i_A Homoserine O-acetyltran 20.5 74 0.0025 20.0 2.5 19 34-52 302-320 (377)
81 3l18_A Intracellular protease 20.4 1.1E+02 0.0038 18.5 3.3 25 10-34 4-28 (168)
82 1pqh_A Aspartate 1-decarboxyla 20.2 49 0.0017 22.8 1.8 22 2-23 93-114 (143)
83 3fp5_A Acyl-COA binding protei 20.1 87 0.003 19.8 2.9 23 19-41 26-51 (106)
84 1pja_A Palmitoyl-protein thioe 20.1 70 0.0024 20.0 2.4 21 32-53 211-231 (302)
85 1rvg_A Fructose-1,6-bisphospha 20.0 47 0.0016 24.6 1.8 31 15-46 18-48 (305)
86 3gxh_A Putative phosphatase (D 20.0 1.3E+02 0.0045 18.6 3.7 36 12-48 69-106 (157)
No 1
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=73.59 E-value=3.7 Score=29.39 Aligned_cols=40 Identities=13% Similarity=0.125 Sum_probs=27.7
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEcCcccceeccc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFNGELDRIRSGC 56 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifNGELDRiRsgY 56 (72)
..+|.=||++.---..+.+-|++-...++.|||+.| |+|.
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn------~tg~ 148 (314)
T 3d0c_A 109 CVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF------KDAH 148 (314)
T ss_dssp EEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE------CCTT
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe------CCCC
Confidence 344456887643334566667776667889999999 7776
No 2
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=60.49 E-value=12 Score=26.46 Aligned_cols=37 Identities=16% Similarity=0.345 Sum_probs=26.1
Q ss_pred eEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 10 ELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 10 ~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
+..+|.-||++.---..+.+-|++-...++.|+++.|
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 145 (301)
T 1xky_A 109 DAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYN 145 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 3455667888764335566667776668899999999
No 3
>4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B*
Probab=58.11 E-value=5.8 Score=25.34 Aligned_cols=22 Identities=18% Similarity=0.539 Sum_probs=17.3
Q ss_pred HHHhhhcccceEEEEcCcccce
Q 035150 31 YKEAVFNTARKLIIFNGELDRI 52 (72)
Q Consensus 31 ye~a~~~~~rpiIifNGELDRi 52 (72)
|.+.+.+.+.+++|+||++|-+
T Consensus 55 ~~~~Ll~~girVliy~Gd~D~i 76 (155)
T 4az3_B 55 YLKLLSSQKYQILLYNGDVDMA 76 (155)
T ss_dssp HHHHHHTCCCEEEEEEETTCSS
T ss_pred HHHHHHHcCceEEEEecccCcc
Confidence 3344567899999999999954
No 4
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=55.72 E-value=11 Score=26.80 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=24.9
Q ss_pred CCeEEEEEeccCC----hhHHHHHHHHHHHhhhcccceEEEEcC
Q 035150 8 EDELFLVAYPYFN----VNEMLVVEELYKEAVFNTARKLIIFNG 47 (72)
Q Consensus 8 ~D~lfVVAYP~fN----vnEml~v~eLye~a~~~~~rpiIifNG 47 (72)
-|.+.++. ||+| +++ ..+.+-|++-...++.|+++.|=
T Consensus 104 adavlv~~-Pyy~~~~~~s~-~~l~~~f~~va~a~~lPiilYn~ 145 (309)
T 3fkr_A 104 AAMVMAMP-PYHGATFRVPE-AQIFEFYARVSDAIAIPIMVQDA 145 (309)
T ss_dssp CSEEEECC-SCBTTTBCCCH-HHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCEEEEcC-CCCccCCCCCH-HHHHHHHHHHHHhcCCCEEEEeC
Confidence 35555554 9873 333 23445667666678999999994
No 5
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=55.57 E-value=15 Score=25.79 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=25.4
Q ss_pred eEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 10 ELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 10 ~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
+..+|.-||++.---..+.+-|++-...++.|+++.|
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 97 DGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 3456667888754334555666666667899999998
No 6
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=52.55 E-value=19 Score=25.49 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=25.3
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.|+++.|
T Consensus 110 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 145 (306)
T 1o5k_A 110 GVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYN 145 (306)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 344556888764335566667776667899999999
No 7
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=51.31 E-value=19 Score=25.40 Aligned_cols=36 Identities=8% Similarity=0.100 Sum_probs=24.0
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.|+++.|
T Consensus 102 avlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 102 GILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp EEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 345556777643223455667776667899999999
No 8
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=50.96 E-value=28 Score=24.32 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=25.0
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.|+++.|
T Consensus 99 avlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (292)
T 2ojp_A 99 GCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYN 134 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 445556888754334556666666667899999999
No 9
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=50.66 E-value=21 Score=25.28 Aligned_cols=36 Identities=14% Similarity=0.303 Sum_probs=25.0
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.|+++.|
T Consensus 113 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 148 (304)
T 3l21_A 113 GLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYD 148 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 345556777764334455667777778899999998
No 10
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=50.17 E-value=20 Score=25.04 Aligned_cols=36 Identities=14% Similarity=0.293 Sum_probs=24.9
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..++.=||++.---..+.+-|++-...++.|+++.|
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (289)
T 2yxg_A 98 AVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYN 133 (289)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 344556888754334556666766667899999999
No 11
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=49.37 E-value=21 Score=25.01 Aligned_cols=36 Identities=28% Similarity=0.360 Sum_probs=24.8
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.|+++.|
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 133 (294)
T 2ehh_A 98 GALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYN 133 (294)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 344556888754334556666666667899999999
No 12
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=49.27 E-value=21 Score=25.29 Aligned_cols=36 Identities=14% Similarity=0.229 Sum_probs=25.1
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.|+++.|
T Consensus 114 avlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn 149 (304)
T 3cpr_A 114 GLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYD 149 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 344556888754335566667776667899999998
No 13
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=48.85 E-value=21 Score=25.06 Aligned_cols=37 Identities=27% Similarity=0.373 Sum_probs=24.5
Q ss_pred CeEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 9 DELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 9 D~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
|.+ ++.=||++.---..+.+-|++-...++.|+++.|
T Consensus 104 dav-lv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn 140 (297)
T 3flu_A 104 DYT-LSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYN 140 (297)
T ss_dssp SEE-EEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CEE-EECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 444 4456777643224455667776667899999998
No 14
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=48.81 E-value=22 Score=24.90 Aligned_cols=36 Identities=25% Similarity=0.343 Sum_probs=24.5
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..++.=||++.---..+.+-|++-...++.|+++.|
T Consensus 99 avlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3tak_A 99 AALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYN 134 (291)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 344556777643224555667776677899999998
No 15
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=48.77 E-value=20 Score=25.04 Aligned_cols=36 Identities=8% Similarity=0.211 Sum_probs=24.8
Q ss_pred EEEEEeccCCh-hHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNV-NEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNv-nEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++. ---..+.+-|++-...++.|+++.|
T Consensus 93 avlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn 129 (286)
T 2r91_A 93 AVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYN 129 (286)
T ss_dssp EEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 44555698886 2224555666766667899999999
No 16
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=48.76 E-value=22 Score=25.10 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=24.3
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..++.=||++.---..+.+-|++-...++.|+++.|
T Consensus 106 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 141 (301)
T 3m5v_A 106 GILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYN 141 (301)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 444556776643224556667776667899999998
No 17
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=48.46 E-value=19 Score=25.26 Aligned_cols=36 Identities=11% Similarity=0.364 Sum_probs=25.0
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.|+++.|
T Consensus 102 avlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn 137 (293)
T 1f6k_A 102 CLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYS 137 (293)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 344556888754345566667776667889999999
No 18
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=48.16 E-value=22 Score=25.42 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=25.0
Q ss_pred CeEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 9 DELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 9 D~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
|.+ +|.=||++.---..+.+-|++-...++.|+++.|
T Consensus 120 dav-lv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 156 (314)
T 3qze_A 120 DAC-LLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYN 156 (314)
T ss_dssp SEE-EEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEE
T ss_pred CEE-EEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 444 4456777653224556667777778899999998
No 19
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=48.03 E-value=23 Score=24.81 Aligned_cols=35 Identities=14% Similarity=0.233 Sum_probs=24.5
Q ss_pred EEEEEeccCCh--hHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNV--NEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNv--nEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++. ++ ..+.+-|++-...++.|+++.|
T Consensus 94 avlv~~P~y~~~~s~-~~l~~~f~~va~a~~lPiilYn 130 (293)
T 1w3i_A 94 GIASYAPYYYPRMSE-KHLVKYFKTLCEVSPHPVYLYN 130 (293)
T ss_dssp EEEEECCCSCSSCCH-HHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEEcCCCCCCCCCH-HHHHHHHHHHHhhCCCCEEEEE
Confidence 44555688886 43 3455666666667899999999
No 20
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=47.79 E-value=22 Score=25.46 Aligned_cols=37 Identities=24% Similarity=0.391 Sum_probs=25.3
Q ss_pred CeEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 9 DELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 9 D~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
|.+ +|.=||++.---..+.+-|++-...++.|+++.|
T Consensus 119 dav-lv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 119 DAV-LVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp SEE-EEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEE-EECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 444 4456877653234556677776678899999998
No 21
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=46.76 E-value=21 Score=25.75 Aligned_cols=36 Identities=19% Similarity=0.101 Sum_probs=25.1
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.|||+.|
T Consensus 132 avlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 132 ALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp EEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 345556888764334566667776667899999999
No 22
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=46.51 E-value=30 Score=24.48 Aligned_cols=36 Identities=8% Similarity=0.227 Sum_probs=24.8
Q ss_pred eEEEEEeccCCh---hHHHHHHHHHHHhhhcccceEEEEc
Q 035150 10 ELFLVAYPYFNV---NEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 10 ~lfVVAYP~fNv---nEml~v~eLye~a~~~~~rpiIifN 46 (72)
+..+|.-||++. ++ ..+.+-|++-...++.|+++.|
T Consensus 111 davlv~~P~y~~~~~s~-~~l~~~f~~ia~a~~lPiilYn 149 (307)
T 3s5o_A 111 DAAMVVTPCYYRGRMSS-AALIHHYTKVADLSPIPVVLYS 149 (307)
T ss_dssp SEEEEECCCTTGGGCCH-HHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEcCCCcCCCCCCH-HHHHHHHHHHHhhcCCCEEEEe
Confidence 345556788874 32 3455566666667899999998
No 23
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=46.49 E-value=28 Score=24.83 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=24.8
Q ss_pred CeEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 9 DELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 9 D~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
|.+ ++.-||++.---..+.+-|++-...++.|+++.|
T Consensus 105 dav-lv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 141 (311)
T 3h5d_A 105 AAG-LAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYN 141 (311)
T ss_dssp SEE-EEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEE
T ss_pred cEE-EEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 444 4556776653224455667776678899999998
No 24
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=45.93 E-value=28 Score=25.31 Aligned_cols=36 Identities=11% Similarity=0.236 Sum_probs=25.0
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.|||+.|
T Consensus 129 avlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn 164 (343)
T 2v9d_A 129 GIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYN 164 (343)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 344556888754334556667776668899999999
No 25
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=45.85 E-value=26 Score=25.63 Aligned_cols=38 Identities=11% Similarity=0.134 Sum_probs=25.7
Q ss_pred EEEEEeccCCh-hHHHHHHHHHHHhhh-cccceEEEEcCc
Q 035150 11 LFLVAYPYFNV-NEMLVVEELYKEAVF-NTARKLIIFNGE 48 (72)
Q Consensus 11 lfVVAYP~fNv-nEml~v~eLye~a~~-~~~rpiIifNGE 48 (72)
..+|.=||++. ---..+.+-|++... .++.|||+.|=-
T Consensus 121 avlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 121 GLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp EEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred EEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence 34455688886 223455566666666 789999999954
No 26
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=45.24 E-value=22 Score=25.03 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=24.6
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.||++.|
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 98 AVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp EEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 344556888754334556666666667899999999
No 27
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=45.24 E-value=28 Score=24.36 Aligned_cols=36 Identities=19% Similarity=0.246 Sum_probs=24.6
Q ss_pred EEEEEeccCCh-hHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNV-NEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNv-nEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++. ---..+.+-|++-...++.|+++.|
T Consensus 94 avlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn 130 (288)
T 2nuw_A 94 GVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYN 130 (288)
T ss_dssp EEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 44555688886 2223455666666667899999999
No 28
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=44.36 E-value=19 Score=25.57 Aligned_cols=36 Identities=6% Similarity=0.073 Sum_probs=24.3
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++.|+++.|
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 109 AVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp EEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 334456877753334455667766667889999999
No 29
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=44.24 E-value=24 Score=24.78 Aligned_cols=36 Identities=11% Similarity=0.303 Sum_probs=23.9
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..++.-||++.---..+.+-|++-...++.|+++.|
T Consensus 100 avlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn 135 (292)
T 3daq_A 100 AIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYN 135 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 344556776653224556667766667899999998
No 30
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=42.63 E-value=26 Score=25.06 Aligned_cols=36 Identities=11% Similarity=0.045 Sum_probs=24.7
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..++.=||++.---..+.+-|++-...++.|+++.|
T Consensus 122 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 122 AVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp EEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 445566776653224556667776667899999999
No 31
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=40.97 E-value=28 Score=24.59 Aligned_cols=36 Identities=8% Similarity=0.225 Sum_probs=23.7
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhccc-ceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTA-RKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~-rpiIifN 46 (72)
..+|.=||++.---..+.+-|++-...++ .||++.|
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn 145 (303)
T 2wkj_A 109 AVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYN 145 (303)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 34455688874433455566666555677 9999999
No 32
>1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5
Probab=40.37 E-value=12 Score=24.18 Aligned_cols=17 Identities=12% Similarity=0.550 Sum_probs=14.0
Q ss_pred hcccceEEEEcCcccce
Q 035150 36 FNTARKLIIFNGELDRI 52 (72)
Q Consensus 36 ~~~~rpiIifNGELDRi 52 (72)
.+.+-+++|+||++|-+
T Consensus 63 l~~girVliysGd~D~i 79 (158)
T 1gxs_B 63 IQAGLRVWVYSGDTDSV 79 (158)
T ss_dssp HHTTCEEEEEEETTCSS
T ss_pred HHcCCeEEEEecccCcc
Confidence 44689999999999954
No 33
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=40.10 E-value=46 Score=21.56 Aligned_cols=23 Identities=30% Similarity=0.508 Sum_probs=20.1
Q ss_pred CCCCCCCCeEEEEEeccCChhHH
Q 035150 2 ADRVKPEDELFLVAYPYFNVNEM 24 (72)
Q Consensus 2 adrv~~~D~lfVVAYP~fNvnEm 24 (72)
|.+++++|.+-+++|=.++..|.
T Consensus 50 Arl~~~GD~vII~aY~~~~~~e~ 72 (97)
T 1uhe_A 50 ARKVAIGDVVIILAYASMNEDEI 72 (97)
T ss_dssp GGGCCTTCEEEEEEEEEECHHHH
T ss_pred HccCCCCCEEEEEECccCCHHHH
Confidence 56789999999999999987764
No 34
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=39.67 E-value=23 Score=23.72 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=26.0
Q ss_pred CCCCCCCCeEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEcCc
Q 035150 2 ADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFNGE 48 (72)
Q Consensus 2 adrv~~~D~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifNGE 48 (72)
|.+++++|.+.+++|=.++..|. .+ +|-|+|-.+
T Consensus 79 Ar~~~~GD~vII~ay~~~~~~e~------------~~-~P~vV~vd~ 112 (114)
T 3oug_A 79 ARRCEIGDQLFIISYTQVDPTRE------------NI-KPKLVDLKT 112 (114)
T ss_dssp GGGCCTTCEEEEEEEEEECTTSC------------CC-CCEEEECC-
T ss_pred HhccCCCCEEEEEECCcCCHHHH------------hc-CCEEEEeCC
Confidence 56789999999999999987752 34 777777544
No 35
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=39.51 E-value=14 Score=23.87 Aligned_cols=22 Identities=18% Similarity=0.212 Sum_probs=18.3
Q ss_pred cccceEEEEcCcccceecccccch
Q 035150 37 NTARKLIIFNGELDRIRSGCILHH 60 (72)
Q Consensus 37 ~~~rpiIifNGELDRiRsgYYP~~ 60 (72)
..+-|+++.|||+ .-+|-||.-
T Consensus 73 ~~~LP~~~VDGev--v~~G~yPt~ 94 (106)
T 3ktb_A 73 ADALPITLVDGEI--AVSQTYPTT 94 (106)
T ss_dssp GGGCSEEEETTEE--EECSSCCCH
T ss_pred cccCCEEEECCEE--EEeccCCCH
Confidence 3568999999999 678889974
No 36
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=39.41 E-value=21 Score=25.00 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=23.2
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 11 LFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
..++.=||++.---..+.+-|++-...++.|+++.|
T Consensus 99 avlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3a5f_A 99 GLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYN 134 (291)
T ss_dssp EEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEE
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 444556888743234455555665567899999999
No 37
>1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B*
Probab=39.18 E-value=13 Score=23.91 Aligned_cols=17 Identities=18% Similarity=0.579 Sum_probs=14.3
Q ss_pred hcccceEEEEcCcccce
Q 035150 36 FNTARKLIIFNGELDRI 52 (72)
Q Consensus 36 ~~~~rpiIifNGELDRi 52 (72)
.+.+-+++|+||++|-+
T Consensus 61 l~~girvlIy~Gd~D~i 77 (153)
T 1whs_B 61 IAAGLRIWVFSGDTDAV 77 (153)
T ss_dssp HHTTCEEEEEEETTCSS
T ss_pred HhcCceEEEEecCcCcc
Confidence 44689999999999964
No 38
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=37.50 E-value=30 Score=24.28 Aligned_cols=36 Identities=17% Similarity=0.205 Sum_probs=23.9
Q ss_pred EEEEEeccCCh-hHHHHHHHHHHHhhhcc---cceEEEEc
Q 035150 11 LFLVAYPYFNV-NEMLVVEELYKEAVFNT---ARKLIIFN 46 (72)
Q Consensus 11 lfVVAYP~fNv-nEml~v~eLye~a~~~~---~rpiIifN 46 (72)
..+|.=||++. ---..+.+-|++-...+ +.|+++.|
T Consensus 101 avlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 101 NILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp EEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred EEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 44555688877 22245556666655566 89999999
No 39
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=36.94 E-value=22 Score=21.01 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=20.2
Q ss_pred eccCChhHHHHHHHHHHHhhhcccceEEEEcCcc
Q 035150 16 YPYFNVNEMLVVEELYKEAVFNTARKLIIFNGEL 49 (72)
Q Consensus 16 YP~fNvnEml~v~eLye~a~~~~~rpiIifNGEL 49 (72)
|-..|+.+--...+-.++.-..+..|.|.+||+.
T Consensus 50 ~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi~g~~ 83 (109)
T 3ipz_A 50 FEDVNILENEMLRQGLKEYSNWPTFPQLYIGGEF 83 (109)
T ss_dssp CEEEEGGGCHHHHHHHHHHHTCSSSCEEEETTEE
T ss_pred cEEEECCCCHHHHHHHHHHHCCCCCCeEEECCEE
Confidence 3445555443333333333357889999999974
No 40
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=36.91 E-value=17 Score=23.76 Aligned_cols=22 Identities=18% Similarity=0.382 Sum_probs=18.3
Q ss_pred cccceEEEEcCcccceecccccch
Q 035150 37 NTARKLIIFNGELDRIRSGCILHH 60 (72)
Q Consensus 37 ~~~rpiIifNGELDRiRsgYYP~~ 60 (72)
...-|+++.|||+ .-+|-||.-
T Consensus 70 ~~~LP~~~VDGev--v~~G~yPt~ 91 (110)
T 3kgk_A 70 AEGLPLLLLDGET--VMAGRYPKR 91 (110)
T ss_dssp GGGCCEEEETTEE--EEESSCCCH
T ss_pred cccCCEEEECCEE--EEeccCCCH
Confidence 4568999999999 678889974
No 41
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=36.82 E-value=72 Score=23.99 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=33.1
Q ss_pred CCCCCCCeEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEcC
Q 035150 3 DRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFNG 47 (72)
Q Consensus 3 drv~~~D~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifNG 47 (72)
-.+|+++.+.|.+ | ....-.++.|++++-..++.|+++...
T Consensus 20 ~~lq~Ge~vlI~~-~---~~~~~l~r~l~~~a~~~Ga~~v~v~~~ 60 (408)
T 2ayi_A 20 LNLEKGQEVIATA-P---IEAVDFVRLLAEKAYREGASLFTVIYG 60 (408)
T ss_dssp TCCCTTCEEEEEE-C---TTCHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred cCCCCCCEEEEEE-C---CchHHHHHHHHHHHHHcCCceEEEEec
Confidence 4688999988876 3 455668999999999999999987653
No 42
>3l7v_A Putative uncharacterized protein SMU.1377C; transcription; 2.26A {Streptococcus mutans}
Probab=34.99 E-value=25 Score=26.01 Aligned_cols=42 Identities=10% Similarity=0.226 Sum_probs=31.2
Q ss_pred CCeEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEcCcccceec
Q 035150 8 EDELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFNGELDRIRS 54 (72)
Q Consensus 8 ~D~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifNGELDRiRs 54 (72)
+|+.|-.+= +|. .+|++||+-.-+..++|++++-++++.++.
T Consensus 64 TdTvYGL~c--~n~---~AV~rL~~iK~Rp~~KPl~vmv~dl~~l~~ 105 (295)
T 3l7v_A 64 TKVGYIIMT--SDK---KGLERKFEAKKRNRNKPGVVLCGSMEELRA 105 (295)
T ss_dssp ETTEEEEEE--SSH---HHHHHHHHHHTCCTTSCCEEECSSHHHHHH
T ss_pred CCCEEEEEE--cCH---HHHHHHHHHcCCCCCCCEEEEeCCHHHHHH
Confidence 455554443 443 388999998877889999999999988764
No 43
>1zjc_A Aminopeptidase AMPS; metallopeptidase, hydrolase; 1.80A {Staphylococcus aureus subsp} SCOP: e.60.1.1
Probab=34.96 E-value=60 Score=24.53 Aligned_cols=41 Identities=17% Similarity=0.269 Sum_probs=33.1
Q ss_pred CCCCCCCeEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEcC
Q 035150 3 DRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFNG 47 (72)
Q Consensus 3 drv~~~D~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifNG 47 (72)
-.+|+++.+.|.+- ....-.++.|++++...++.|+++...
T Consensus 23 ~~lq~Ge~VlI~~~----~~~~~l~r~l~~~a~~~Ga~~v~v~~~ 63 (418)
T 1zjc_A 23 MNVQPKQPVFIRSS----VETLELTHLIVEEAYHCGASDVRVVYS 63 (418)
T ss_dssp TCCCTTCCEEEEEE----TTCHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred cCCCCCCEEEEEEC----CchHHHHHHHHHHHHHcCCceEEEEec
Confidence 46899999988874 445668899999999999999987543
No 44
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=32.57 E-value=28 Score=22.51 Aligned_cols=23 Identities=48% Similarity=0.648 Sum_probs=19.9
Q ss_pred CCCCCCCCeEEEEEeccCChhHH
Q 035150 2 ADRVKPEDELFLVAYPYFNVNEM 24 (72)
Q Consensus 2 adrv~~~D~lfVVAYP~fNvnEm 24 (72)
|.+++++|.+-+++|=.++..|.
T Consensus 52 Arl~~~GD~vII~aY~~~~~~e~ 74 (96)
T 1vc3_B 52 AHLVKPGDLVILVAYGVFDEEEA 74 (96)
T ss_dssp GGTCCTTCEEEEEEEEEECHHHH
T ss_pred HccCCCCCEEEEEECccCCHHHH
Confidence 56799999999999999987653
No 45
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=30.92 E-value=36 Score=23.44 Aligned_cols=23 Identities=17% Similarity=0.278 Sum_probs=15.5
Q ss_pred HHHHHHHHhhh----cccceEEEEcCc
Q 035150 26 VVEELYKEAVF----NTARKLIIFNGE 48 (72)
Q Consensus 26 ~v~eLye~a~~----~~~rpiIifNGE 48 (72)
-++||+|.... -+.+|++++|.+
T Consensus 122 TLdElfE~lt~~qlg~~~kPvvll~~~ 148 (215)
T 2a33_A 122 TLEELLEVITWAQLGIHDKPVGLLNVD 148 (215)
T ss_dssp HHHHHHHHHHHHHTTSCCCCEEEECGG
T ss_pred hHHHHHHHHHHHHhCCCCCCeEEecCc
Confidence 35666663222 468999999986
No 46
>3un7_A PBPA, penicillin-binding protein A; transpeptidase, peptidoglycan, B lactam, transferase; 2.00A {Mycobacterium tuberculosis} PDB: 3upn_A* 3upo_A* 3upp_A* 3lo7_A
Probab=30.46 E-value=59 Score=24.04 Aligned_cols=39 Identities=23% Similarity=0.231 Sum_probs=25.5
Q ss_pred CCCCCCeEEEEEeccCChhHHH-----HHHHHHHHhhhcccceE
Q 035150 4 RVKPEDELFLVAYPYFNVNEML-----VVEELYKEAVFNTARKL 42 (72)
Q Consensus 4 rv~~~D~lfVVAYP~fNvnEml-----~v~eLye~a~~~~~rpi 42 (72)
-.+..+=+-.|.+|.||+|... .-.+-|+.......+|+
T Consensus 137 dp~TGeILAmas~P~ydpN~~~~~~~~~~~~~~~~l~~~~~~~~ 180 (462)
T 3un7_A 137 EPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPL 180 (462)
T ss_dssp CTTTCBEEEEEEESCCCHHHHTCSCHHHHHHHHHHHHHCTTCTT
T ss_pred ECCCCcEEEEeccCCCCccccccCCcccchHHHHhhccCccchh
Confidence 4566777888999999999763 23344555444555554
No 47
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=29.82 E-value=54 Score=20.68 Aligned_cols=21 Identities=19% Similarity=0.439 Sum_probs=16.9
Q ss_pred HHhhhcccceEEEEcCcccce
Q 035150 32 KEAVFNTARKLIIFNGELDRI 52 (72)
Q Consensus 32 e~a~~~~~rpiIifNGELDRi 52 (72)
.+.+..-..|+++++|+-|++
T Consensus 239 ~~~~~~i~~Pvlii~G~~D~~ 259 (342)
T 3hju_A 239 ERALPKLTVPFLLLQGSADRL 259 (342)
T ss_dssp HHHGGGCCSCEEEEEETTCSS
T ss_pred HHHHHhCCcCEEEEEeCCCcc
Confidence 345566789999999999976
No 48
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=29.12 E-value=61 Score=18.82 Aligned_cols=20 Identities=10% Similarity=-0.012 Sum_probs=15.8
Q ss_pred hhhcccceEEEEcCccccee
Q 035150 34 AVFNTARKLIIFNGELDRIR 53 (72)
Q Consensus 34 a~~~~~rpiIifNGELDRiR 53 (72)
....-..|+.++.|+-|++-
T Consensus 179 ~~~~~~~P~l~i~g~~D~~~ 198 (251)
T 3dkr_A 179 DLNLVKQPTFIGQAGQDELV 198 (251)
T ss_dssp TGGGCCSCEEEEEETTCSSB
T ss_pred cccccCCCEEEEecCCCccc
Confidence 34466799999999999763
No 49
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=28.82 E-value=63 Score=19.24 Aligned_cols=20 Identities=20% Similarity=0.441 Sum_probs=16.4
Q ss_pred HhhhcccceEEEEcCcccce
Q 035150 33 EAVFNTARKLIIFNGELDRI 52 (72)
Q Consensus 33 ~a~~~~~rpiIifNGELDRi 52 (72)
+.+..-..|+.++.|+-|++
T Consensus 222 ~~~~~i~~P~l~i~g~~D~~ 241 (303)
T 3pe6_A 222 RALPKLTVPFLLLQGSADRL 241 (303)
T ss_dssp HHGGGCCSCEEEEEETTCSS
T ss_pred HHhhcCCCCEEEEeeCCCCC
Confidence 44556789999999999976
No 50
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=28.34 E-value=61 Score=19.56 Aligned_cols=21 Identities=19% Similarity=0.259 Sum_probs=16.9
Q ss_pred HHhhhcccceEEEEcCcccce
Q 035150 32 KEAVFNTARKLIIFNGELDRI 52 (72)
Q Consensus 32 e~a~~~~~rpiIifNGELDRi 52 (72)
.+.+..-..|+++++|+-|.+
T Consensus 198 ~~~~~~~~~P~lii~G~~D~~ 218 (270)
T 3rm3_A 198 KAKLDRIVCPALIFVSDEDHV 218 (270)
T ss_dssp HHTGGGCCSCEEEEEETTCSS
T ss_pred HhhhhhcCCCEEEEECCCCcc
Confidence 345557789999999999976
No 51
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=27.79 E-value=58 Score=20.84 Aligned_cols=21 Identities=10% Similarity=0.110 Sum_probs=16.6
Q ss_pred HHhhhcccceEEEEcCcccce
Q 035150 32 KEAVFNTARKLIIFNGELDRI 52 (72)
Q Consensus 32 e~a~~~~~rpiIifNGELDRi 52 (72)
+..+..-..|+.+++|+-|++
T Consensus 211 ~~~l~~i~~P~Lii~G~~D~~ 231 (281)
T 4fbl_A 211 EMLLPRVKCPALIIQSREDHV 231 (281)
T ss_dssp HHHGGGCCSCEEEEEESSCSS
T ss_pred cccccccCCCEEEEEeCCCCC
Confidence 344556788999999999975
No 52
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=27.13 E-value=58 Score=22.47 Aligned_cols=22 Identities=18% Similarity=0.163 Sum_probs=15.0
Q ss_pred HHHHHHHhh----hcccceEEEEcCc
Q 035150 27 VEELYKEAV----FNTARKLIIFNGE 48 (72)
Q Consensus 27 v~eLye~a~----~~~~rpiIifNGE 48 (72)
++||+|... .-+.+|++++|.+
T Consensus 119 LdElfE~lt~~qlg~~~kPvvll~~~ 144 (216)
T 1ydh_A 119 MEELLEMITWSQLGIHKKTVGLLNVD 144 (216)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEECGG
T ss_pred HHHHHHHHHHHHhcccCCCEEEecCC
Confidence 456665432 2578999999975
No 53
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=25.99 E-value=62 Score=19.38 Aligned_cols=19 Identities=32% Similarity=0.466 Sum_probs=15.7
Q ss_pred CChhHHHHHHHHHHHhhhc
Q 035150 19 FNVNEMLVVEELYKEAVFN 37 (72)
Q Consensus 19 fNvnEml~v~eLye~a~~~ 37 (72)
....++|.+..||++|-.+
T Consensus 19 ~~~~~~L~lYalyKQAt~G 37 (86)
T 1st7_A 19 PSTDELLELYALYKQATVG 37 (86)
T ss_dssp CCHHHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHHhhC
Confidence 4567899999999998763
No 54
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=25.60 E-value=33 Score=22.47 Aligned_cols=23 Identities=26% Similarity=0.447 Sum_probs=19.9
Q ss_pred CCCCCCCCeEEEEEeccCChhHH
Q 035150 2 ADRVKPEDELFLVAYPYFNVNEM 24 (72)
Q Consensus 2 adrv~~~D~lfVVAYP~fNvnEm 24 (72)
|.+++++|.+.+++|=.++..|.
T Consensus 51 Arl~~~GD~vII~aY~~~~~~e~ 73 (102)
T 3plx_B 51 ARLAEVGDKVIIMSYADFNEEEA 73 (102)
T ss_dssp GGGCCTTCEEEEEEEEEEEHHHH
T ss_pred HhccCCCCEEEEEEcccCCHHHH
Confidence 56799999999999999887654
No 55
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=25.57 E-value=73 Score=19.34 Aligned_cols=22 Identities=9% Similarity=0.067 Sum_probs=17.2
Q ss_pred HHhhhcccceEEEEcCccccee
Q 035150 32 KEAVFNTARKLIIFNGELDRIR 53 (72)
Q Consensus 32 e~a~~~~~rpiIifNGELDRiR 53 (72)
.+.+..-..|+.+++|+-|++-
T Consensus 228 ~~~l~~i~~P~l~i~g~~D~~~ 249 (302)
T 1mj5_A 228 AGWLSESPIPKLFINAEPGALT 249 (302)
T ss_dssp HHHHTTCCSCEEEEEEEECSSS
T ss_pred HhhhhccCCCeEEEEeCCCCCC
Confidence 3445567899999999999763
No 56
>1jcu_A Conserved protein MTH1692; mixed alpha-beta structure, structural genomics; NMR {Methanothermobacterthermautotrophicus} SCOP: d.115.1.1
Probab=25.42 E-value=56 Score=22.06 Aligned_cols=42 Identities=19% Similarity=0.212 Sum_probs=30.8
Q ss_pred EEEeccCC-------hhHHHHHHHHHHHhhhcccceEEEEcCcccceec
Q 035150 13 LVAYPYFN-------VNEMLVVEELYKEAVFNTARKLIIFNGELDRIRS 54 (72)
Q Consensus 13 VVAYP~fN-------vnEml~v~eLye~a~~~~~rpiIifNGELDRiRs 54 (72)
|||||.-- ..--..++.||+-.-+..++|+++.-++++.++.
T Consensus 28 vVa~pTdtvygL~~da~n~~Av~rl~~~K~R~~~kPl~v~v~~~~~~~~ 76 (208)
T 1jcu_A 28 IVIYPTDTIYGLGVNALDEDAVRRLFRVKGRSPHKPVSICVSCVDEIPR 76 (208)
T ss_dssp EEECCCSSSCEEEEETTSHHHHHHHHHHCCSCTTSCCEEECSCTTTSTT
T ss_pred EEEEECCCEEEEEEeCCCHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHH
Confidence 56676532 2233478999986666789999999999888765
No 57
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=24.89 E-value=65 Score=19.42 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=15.8
Q ss_pred CChhHHHHHHHHHHHhhhc
Q 035150 19 FNVNEMLVVEELYKEAVFN 37 (72)
Q Consensus 19 fNvnEml~v~eLye~a~~~ 37 (72)
....++|.+..||++|-.+
T Consensus 22 ~~~~~~L~LYalyKQAt~G 40 (89)
T 1hbk_A 22 LPNELKLDLYKYYKQSTIG 40 (89)
T ss_dssp CCHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhhcC
Confidence 4567999999999998763
No 58
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=24.42 E-value=61 Score=18.50 Aligned_cols=22 Identities=5% Similarity=0.057 Sum_probs=14.4
Q ss_pred HHHHHHhhhcccceEEEEcCcc
Q 035150 28 EELYKEAVFNTARKLIIFNGEL 49 (72)
Q Consensus 28 ~eLye~a~~~~~rpiIifNGEL 49 (72)
++..++.-.....|.|.+||+.
T Consensus 62 ~~~l~~~~g~~tvP~ifi~g~~ 83 (113)
T 3rhb_A 62 QKVLERLTGQHTVPNVFVCGKH 83 (113)
T ss_dssp HHHHHHHHSCCSSCEEEETTEE
T ss_pred HHHHHHHhCCCCcCEEEECCEE
Confidence 3333333346789999999973
No 59
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=24.36 E-value=35 Score=19.89 Aligned_cols=34 Identities=6% Similarity=0.043 Sum_probs=19.0
Q ss_pred eccCChhHHHHHHHHHHHhh-hcccceEEEEcCcc
Q 035150 16 YPYFNVNEMLVVEELYKEAV-FNTARKLIIFNGEL 49 (72)
Q Consensus 16 YP~fNvnEml~v~eLye~a~-~~~~rpiIifNGEL 49 (72)
|-..|+.+--...+-+++.. .....|.|.+||+.
T Consensus 43 y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi~g~~ 77 (99)
T 3qmx_A 43 FQEYCIDGDNEAREAMAARANGKRSLPQIFIDDQH 77 (99)
T ss_dssp CEEEECTTCHHHHHHHHHHTTTCCCSCEEEETTEE
T ss_pred CEEEEcCCCHHHHHHHHHHhCCCCCCCEEEECCEE
Confidence 33345544333333333333 56788999999974
No 60
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=24.26 E-value=71 Score=21.74 Aligned_cols=22 Identities=9% Similarity=0.142 Sum_probs=14.9
Q ss_pred HHHHHHHhh----hcccceEEEEcCc
Q 035150 27 VEELYKEAV----FNTARKLIIFNGE 48 (72)
Q Consensus 27 v~eLye~a~----~~~~rpiIifNGE 48 (72)
++||+|... .-+.+|++++|.+
T Consensus 122 LdElfe~lt~~qlg~~~kPvvlln~~ 147 (189)
T 3sbx_A 122 LDELLDVWTEGYLGMHDKSIVVLDPW 147 (189)
T ss_dssp HHHHHHHHHHHHTTSCCCCEEEECTT
T ss_pred HHHHHHHHHHHHhcccCCCEEEecCC
Confidence 566666432 2468999999964
No 61
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=24.21 E-value=71 Score=19.19 Aligned_cols=21 Identities=19% Similarity=0.077 Sum_probs=16.5
Q ss_pred HhhhcccceEEEEcCccccee
Q 035150 33 EAVFNTARKLIIFNGELDRIR 53 (72)
Q Consensus 33 ~a~~~~~rpiIifNGELDRiR 53 (72)
+.+..-..|+++++|+-|++-
T Consensus 228 ~~l~~i~~P~lii~G~~D~~~ 248 (297)
T 2qvb_A 228 SWLEETDMPKLFINAEPGAII 248 (297)
T ss_dssp HHHHHCCSCEEEEEEEECSSS
T ss_pred hhcccccccEEEEecCCCCcC
Confidence 344567899999999999763
No 62
>1k7j_A Protein YCIO, protein TF1; structural genomics, X-RAY crystallography, putative translation factor, PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.115.1.1 PDB: 1kk9_A
Probab=24.00 E-value=55 Score=22.03 Aligned_cols=31 Identities=6% Similarity=0.208 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhhcccceEEEEcCcccceec
Q 035150 24 MLVVEELYKEAVFNTARKLIIFNGELDRIRS 54 (72)
Q Consensus 24 ml~v~eLye~a~~~~~rpiIifNGELDRiRs 54 (72)
-.+|+.||+-.-+..++|+++.-++++.++.
T Consensus 47 ~~Av~rl~~~K~R~~~kPl~v~~~~~~~~~~ 77 (206)
T 1k7j_A 47 KNAMERICRIRQLPDGHNFTLMCRDLSELST 77 (206)
T ss_dssp HHHHHHHHHHHTCCTTCCCEEECSSHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCHHHHHH
Confidence 3478899987777789999999999887764
No 63
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=23.81 E-value=21 Score=23.88 Aligned_cols=14 Identities=29% Similarity=0.764 Sum_probs=11.5
Q ss_pred cceEEEEcCcccce
Q 035150 39 ARKLIIFNGELDRI 52 (72)
Q Consensus 39 ~rpiIifNGELDRi 52 (72)
..-||+++|++||.
T Consensus 6 kl~II~~sG~~dka 19 (160)
T 3pnx_A 6 KMNLLLFSGDYDKA 19 (160)
T ss_dssp EEEEEECCCCHHHH
T ss_pred cEEEEEecCCHHHH
Confidence 34589999999985
No 64
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=23.61 E-value=63 Score=19.68 Aligned_cols=18 Identities=28% Similarity=0.429 Sum_probs=15.2
Q ss_pred ChhHHHHHHHHHHHhhhc
Q 035150 20 NVNEMLVVEELYKEAVFN 37 (72)
Q Consensus 20 NvnEml~v~eLye~a~~~ 37 (72)
...++|.+..||++|..+
T Consensus 23 ~~~~~L~lYalyKQAt~G 40 (89)
T 3epy_A 23 DDGELKELYGLYKQAIVG 40 (89)
T ss_dssp CHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHhhC
Confidence 456899999999998874
No 65
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=23.34 E-value=53 Score=19.21 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=19.2
Q ss_pred eccCChh---HHHHHHHHHHHhhhcccceEEEEcCcc
Q 035150 16 YPYFNVN---EMLVVEELYKEAVFNTARKLIIFNGEL 49 (72)
Q Consensus 16 YP~fNvn---Eml~v~eLye~a~~~~~rpiIifNGEL 49 (72)
|-..|++ +....++-.++.-..+..|.|.+||+.
T Consensus 44 ~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~g~~ 80 (114)
T 3h8q_A 44 CNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVH 80 (114)
T ss_dssp CEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEETTEE
T ss_pred cEEEEecCCCChHHHHHHHHHHhCCCccCEEEECCEE
Confidence 3444444 233333333333346889999999973
No 66
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=22.84 E-value=41 Score=19.77 Aligned_cols=21 Identities=10% Similarity=0.154 Sum_probs=16.6
Q ss_pred HHhhhcccceEEEEcCcccce
Q 035150 32 KEAVFNTARKLIIFNGELDRI 52 (72)
Q Consensus 32 e~a~~~~~rpiIifNGELDRi 52 (72)
.+....-..|+.+++|+-|++
T Consensus 224 ~~~~~~i~~P~l~i~g~~D~~ 244 (286)
T 3qit_A 224 LEMLKSIQVPTTLVYGDSSKL 244 (286)
T ss_dssp HHHHHHCCSCEEEEEETTCCS
T ss_pred HHHHhccCCCeEEEEeCCCcc
Confidence 344456789999999999985
No 67
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=22.46 E-value=1.3e+02 Score=17.91 Aligned_cols=42 Identities=2% Similarity=0.022 Sum_probs=27.4
Q ss_pred eEEEEEeccCChhHHHHHHHHHHHhhhc---ccceEEEEcCcccc
Q 035150 10 ELFLVAYPYFNVNEMLVVEELYKEAVFN---TARKLIIFNGELDR 51 (72)
Q Consensus 10 ~lfVVAYP~fNvnEml~v~eLye~a~~~---~~rpiIifNGELDR 51 (72)
.++++.|-..+..-+..+.+.+.+.... .+.|+|++---.|.
T Consensus 92 d~ii~v~D~~~~~s~~~~~~~~~~~~~~~~~~~~piilv~NK~Dl 136 (188)
T 1zd9_A 92 SAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDL 136 (188)
T ss_dssp SEEEEEEETTCGGGHHHHHHHHHHHHTCGGGTTCCEEEEEECTTS
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHhCcccCCCCEEEEEECCCC
Confidence 4567778777777677777766665543 67787766444443
No 68
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=22.02 E-value=37 Score=25.74 Aligned_cols=35 Identities=17% Similarity=0.219 Sum_probs=25.9
Q ss_pred HHHHHHHHhhhcccceEEEEcCcccceecccccchhheee
Q 035150 26 VVEELYKEAVFNTARKLIIFNGELDRIRSGCILHHSFIII 65 (72)
Q Consensus 26 ~v~eLye~a~~~~~rpiIifNGELDRiRsgYYP~~~f~~~ 65 (72)
++|.|| +|......||+.=-.+. +.+.|+.|||-+
T Consensus 247 vTEK~~-~al~~g~VPI~~G~~~~----~~~~Pp~SfI~~ 281 (371)
T 2nzw_A 247 VTEKII-DAYFSHTIPIYWGSPSV----AKDFNPKSFVNV 281 (371)
T ss_dssp CCTHHH-HHHHTTCEEEEESCTTG----GGTSCGGGSEEG
T ss_pred ccHHHH-HHHhCCeEEEEECCCch----hhhCCCCceEEc
Confidence 578888 67778889997754433 467899999853
No 69
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=21.94 E-value=1.2e+02 Score=17.22 Aligned_cols=43 Identities=7% Similarity=0.107 Sum_probs=26.1
Q ss_pred CeEEEEEeccCChhHHHHHHHHHHHhhhc---ccceEEEEcCcccc
Q 035150 9 DELFLVAYPYFNVNEMLVVEELYKEAVFN---TARKLIIFNGELDR 51 (72)
Q Consensus 9 D~lfVVAYP~fNvnEml~v~eLye~a~~~---~~rpiIifNGELDR 51 (72)
-.++++.|...+..-+....+.+...... .+.|++++---.|.
T Consensus 75 ~d~ii~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~piilv~nK~Dl 120 (171)
T 1upt_A 75 TDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDM 120 (171)
T ss_dssp CSEEEEEEETTCCTTHHHHHHHHHHHHTCGGGTTCEEEEEEECTTS
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHhchhhCCCEEEEEEECCCC
Confidence 44666777777766555566666655543 57787766444443
No 70
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.86 E-value=77 Score=20.02 Aligned_cols=19 Identities=16% Similarity=0.237 Sum_probs=15.7
Q ss_pred CChhHHHHHHHHHHHhhhc
Q 035150 19 FNVNEMLVVEELYKEAVFN 37 (72)
Q Consensus 19 fNvnEml~v~eLye~a~~~ 37 (72)
....++|.+..||++|..+
T Consensus 26 p~~~~~L~LYaLyKQAt~G 44 (109)
T 2cop_A 26 ASREQLLYLYARYKQVKVG 44 (109)
T ss_dssp SCHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhhcC
Confidence 3567999999999999763
No 71
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=21.81 E-value=93 Score=22.15 Aligned_cols=36 Identities=22% Similarity=0.546 Sum_probs=22.1
Q ss_pred CeEEEEEec-cCC--hhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 9 DELFLVAYP-YFN--VNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 9 D~lfVVAYP-~fN--vnEml~v~eLye~a~~~~~rpiIifN 46 (72)
|.+ +|.=| ||+ .++ ..+.+-|++-...++.|+++.|
T Consensus 108 dav-lv~~P~y~~kp~~~-~~l~~~f~~ia~a~~lPiilYn 146 (318)
T 3qfe_A 108 NYV-LVLPPAYFGKATTP-PVIKSFFDDVSCQSPLPVVIYN 146 (318)
T ss_dssp SEE-EECCCCC---CCCH-HHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEE-EEeCCcccCCCCCH-HHHHHHHHHHHhhCCCCEEEEe
Confidence 444 45567 666 332 3445566666667899999998
No 72
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=21.77 E-value=81 Score=19.01 Aligned_cols=19 Identities=32% Similarity=0.359 Sum_probs=15.6
Q ss_pred CChhHHHHHHHHHHHhhhc
Q 035150 19 FNVNEMLVVEELYKEAVFN 37 (72)
Q Consensus 19 fNvnEml~v~eLye~a~~~ 37 (72)
....++|.+..||++|-.+
T Consensus 20 ~~~~~~L~lYalyKQAt~G 38 (87)
T 2cb8_A 20 PSDEEMLFIYGHYKQATVG 38 (87)
T ss_dssp CCHHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHhhhhC
Confidence 3567999999999998763
No 73
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=21.61 E-value=95 Score=21.63 Aligned_cols=23 Identities=26% Similarity=0.522 Sum_probs=17.4
Q ss_pred HHHHHHHHhhhcccceEEEEcCc
Q 035150 26 VVEELYKEAVFNTARKLIIFNGE 48 (72)
Q Consensus 26 ~v~eLye~a~~~~~rpiIifNGE 48 (72)
.++++-+.....+-|++|++||-
T Consensus 98 ~l~di~~sl~~~G~rrlvivNgH 120 (254)
T 3lub_A 98 ILEDIVSSLHVQGFRKLLILSGH 120 (254)
T ss_dssp HHHHHHHHHHHTTCCEEEEEESC
T ss_pred HHHHHHHHHHHcCCCEEEEEeCC
Confidence 55666666666788999999974
No 74
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=21.42 E-value=54 Score=22.55 Aligned_cols=39 Identities=26% Similarity=0.362 Sum_probs=27.5
Q ss_pred CCCCCCCCeEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEcCcccce
Q 035150 2 ADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFNGELDRI 52 (72)
Q Consensus 2 adrv~~~D~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifNGELDRi 52 (72)
|.+++++|.+.+++|=.++..|. . +-+|-|+|-.+=.|+
T Consensus 76 Arl~~~GD~vII~aYa~~~~~E~-----------~-~~~P~vV~vd~~N~i 114 (139)
T 2c45_A 76 AHLVHPGDLVILIAYATMDDARA-----------R-TYQPRIVFVDAYNKP 114 (139)
T ss_dssp TTTSCTTCEEEEEECCEEEHHHH-----------H-SCCCEEEECCTTCC-
T ss_pred HccCCCCCEEEEEECCcCCHHHh-----------c-cCCCeEEEECCCCCE
Confidence 67899999999999999987653 2 445666665544444
No 75
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=21.28 E-value=1.6e+02 Score=18.41 Aligned_cols=42 Identities=7% Similarity=0.128 Sum_probs=33.4
Q ss_pred CCCCCCCeEEEEEeccCChhHHHHHHHHHHHhhhcccceEEEEcC
Q 035150 3 DRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVFNTARKLIIFNG 47 (72)
Q Consensus 3 drv~~~D~lfVVAYP~fNvnEml~v~eLye~a~~~~~rpiIifNG 47 (72)
+|++..|-+.|.+=++.+-++|..-| + +.+..-++|||..++
T Consensus 34 ~~I~~~~~vIvL~G~~t~~s~wv~~E-I--~~A~~~gkpIigV~~ 75 (111)
T 1eiw_A 34 ATPEDADAVIVLAGLWGTRRDEILGA-V--DLARKSSKPIITVRP 75 (111)
T ss_dssp CCSSSCSEEEEEGGGTTTSHHHHHHH-H--HHHTTTTCCEEEECC
T ss_pred CccccCCEEEEEeCCCcCCChHHHHH-H--HHHHHcCCCEEEEEc
Confidence 57889999999999999889887533 2 455679999999876
No 76
>1t4w_A CEP-1, C.elegans P53 tumor suppressor-like transcription factor; DNA-binding domain; 2.10A {Caenorhabditis elegans} SCOP: b.2.5.2
Probab=21.20 E-value=20 Score=26.05 Aligned_cols=10 Identities=40% Similarity=0.766 Sum_probs=8.8
Q ss_pred CeEEEEEecc
Q 035150 9 DELFLVAYPY 18 (72)
Q Consensus 9 D~lfVVAYP~ 18 (72)
+|++|||||-
T Consensus 173 kQv~iVgYPR 182 (196)
T 1t4w_A 173 KQVRIVAYPR 182 (196)
T ss_dssp EEEEECSCHH
T ss_pred hheEEeccch
Confidence 6899999995
No 77
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=21.11 E-value=74 Score=21.72 Aligned_cols=21 Identities=14% Similarity=0.302 Sum_probs=14.8
Q ss_pred HHHHHHHHhhhcccceEEEEcCc
Q 035150 26 VVEELYKEAVFNTARKLIIFNGE 48 (72)
Q Consensus 26 ~v~eLye~a~~~~~rpiIifNGE 48 (72)
-++|+++.. ..++|++++||+
T Consensus 131 TL~E~~eal--~~~kPV~lln~~ 151 (195)
T 1rcu_A 131 TAIEILGAY--ALGKPVILLRGT 151 (195)
T ss_dssp HHHHHHHHH--HTTCCEEEETTS
T ss_pred HHHHHHHHH--hcCCCEEEECCC
Confidence 455665543 368999999974
No 78
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=21.10 E-value=89 Score=21.42 Aligned_cols=22 Identities=18% Similarity=0.307 Sum_probs=14.4
Q ss_pred HHHHHHHhhh----cccceEEEEcCc
Q 035150 27 VEELYKEAVF----NTARKLIIFNGE 48 (72)
Q Consensus 27 v~eLye~a~~----~~~rpiIifNGE 48 (72)
++||+|.... -+.+|++++|.+
T Consensus 131 ldEl~e~lt~~qlg~~~kPvvlln~~ 156 (199)
T 3qua_A 131 LEEFFEAWTAGYLGMHDKPLILLDPF 156 (199)
T ss_dssp HHHHHHHHHHHHTTSCCCCEEEECTT
T ss_pred HHHHHHHHHHHHhccCCCCEEEEcCC
Confidence 4566653321 368999999964
No 79
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=20.64 E-value=1.4e+02 Score=17.49 Aligned_cols=42 Identities=12% Similarity=0.169 Sum_probs=26.6
Q ss_pred CeEEEEEeccCChhHHHHHHHHHHHhhhc---ccceEEEEcCccc
Q 035150 9 DELFLVAYPYFNVNEMLVVEELYKEAVFN---TARKLIIFNGELD 50 (72)
Q Consensus 9 D~lfVVAYP~fNvnEml~v~eLye~a~~~---~~rpiIifNGELD 50 (72)
-.++++.|...+..-+..+.+.+++.... .+.|+|++---.|
T Consensus 86 ~d~ii~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~piilv~nK~D 130 (186)
T 1ksh_A 86 TDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQD 130 (186)
T ss_dssp CSEEEEEEETTCGGGHHHHHHHHHHHHTCGGGTTCEEEEEEECTT
T ss_pred CCEEEEEEECcCHHHHHHHHHHHHHHHhChhcCCCcEEEEEeCcc
Confidence 34567778777776666666666665543 5678766543344
No 80
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=20.47 E-value=74 Score=20.05 Aligned_cols=19 Identities=16% Similarity=0.274 Sum_probs=15.3
Q ss_pred hhhcccceEEEEcCcccce
Q 035150 34 AVFNTARKLIIFNGELDRI 52 (72)
Q Consensus 34 a~~~~~rpiIifNGELDRi 52 (72)
.+..-..|+.+++|+-|++
T Consensus 302 ~l~~i~~Pvlii~G~~D~~ 320 (377)
T 3i1i_A 302 ALSNVEANVLMIPCKQDLL 320 (377)
T ss_dssp HHHTCCSEEEEECBTTCSS
T ss_pred HHhhCCCCEEEEecCCccc
Confidence 3446678999999999985
No 81
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=20.38 E-value=1.1e+02 Score=18.55 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=21.0
Q ss_pred eEEEEEeccCChhHHHHHHHHHHHh
Q 035150 10 ELFLVAYPYFNVNEMLVVEELYKEA 34 (72)
Q Consensus 10 ~lfVVAYP~fNvnEml~v~eLye~a 34 (72)
.+.++.||.|+..|+....+.++.+
T Consensus 4 ki~il~~~g~~~~e~~~~~~~l~~a 28 (168)
T 3l18_A 4 KVLFLSADGFEDLELIYPLHRIKEE 28 (168)
T ss_dssp EEEEECCTTBCHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCccHHHHHHHHHHHHHC
Confidence 5778999999999999888777753
No 82
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=20.16 E-value=49 Score=22.84 Aligned_cols=22 Identities=14% Similarity=0.164 Sum_probs=19.3
Q ss_pred CCCCCCCCeEEEEEeccCChhH
Q 035150 2 ADRVKPEDELFLVAYPYFNVNE 23 (72)
Q Consensus 2 adrv~~~D~lfVVAYP~fNvnE 23 (72)
|.+++++|.+.+++|=.++..|
T Consensus 93 Arl~~~GD~VII~sYa~~~~~E 114 (143)
T 1pqh_A 93 AHCASVGDIVIIASFVTMPDEE 114 (143)
T ss_dssp GGTCCTTCEEEEEEEEEEEHHH
T ss_pred HccCCCCCEEEEEECccCCHHH
Confidence 5678999999999999988765
No 83
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=20.08 E-value=87 Score=19.81 Aligned_cols=23 Identities=22% Similarity=0.277 Sum_probs=18.0
Q ss_pred CChhHHHHHHHHHHHhhhc---ccce
Q 035150 19 FNVNEMLVVEELYKEAVFN---TARK 41 (72)
Q Consensus 19 fNvnEml~v~eLye~a~~~---~~rp 41 (72)
....++|.+..||++|-.+ +.+|
T Consensus 26 ps~~~~L~LYalyKQAt~Gd~~~~~P 51 (106)
T 3fp5_A 26 PTQDEQLYFYKYFKQATVGDVNISRP 51 (106)
T ss_dssp CCHHHHHHHHHHHHHHHTCSCCSCCC
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 4567999999999999874 4455
No 84
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=20.07 E-value=70 Score=19.98 Aligned_cols=21 Identities=14% Similarity=0.396 Sum_probs=15.6
Q ss_pred HHhhhcccceEEEEcCccccee
Q 035150 32 KEAVFNTARKLIIFNGELDRIR 53 (72)
Q Consensus 32 e~a~~~~~rpiIifNGELDRiR 53 (72)
.+....-. |+.+++|+-|.+=
T Consensus 211 ~~~l~~i~-P~lii~G~~D~~v 231 (302)
T 1pja_A 211 RKNFLRVG-HLVLIGGPDDGVI 231 (302)
T ss_dssp HHHHTTCS-EEEEEECTTCSSS
T ss_pred HHHHhccC-cEEEEEeCCCCcc
Confidence 44444555 9999999999863
No 85
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=20.04 E-value=47 Score=24.61 Aligned_cols=31 Identities=23% Similarity=0.229 Sum_probs=22.8
Q ss_pred EeccCChhHHHHHHHHHHHhhhcccceEEEEc
Q 035150 15 AYPYFNVNEMLVVEELYKEAVFNTARKLIIFN 46 (72)
Q Consensus 15 AYP~fNvnEml~v~eLye~a~~~~~rpiIifN 46 (72)
|.|.||++-|..++..-+.|.. ...|+|+--
T Consensus 18 AV~AfNv~n~e~~~Ail~AAee-~~sPvIlq~ 48 (305)
T 1rvg_A 18 GVGAFNVNNMEFLQAVLEAAEE-QRSPVILAL 48 (305)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred EEEEEeeCCHHHHHHHHHHHHH-hCCCEEEEC
Confidence 5699999988888887766544 455888744
No 86
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=20.01 E-value=1.3e+02 Score=18.56 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=25.9
Q ss_pred EEEEeccCChhHH--HHHHHHHHHhhhcccceEEEEcCc
Q 035150 12 FLVAYPYFNVNEM--LVVEELYKEAVFNTARKLIIFNGE 48 (72)
Q Consensus 12 fVVAYP~fNvnEm--l~v~eLye~a~~~~~rpiIifNGE 48 (72)
-.+..|. +++.. ..++++.+......+++++|-|.-
T Consensus 69 ~~~~i~~-Dv~~~~~~~v~~~~~~i~~~~G~dVLVnnAg 106 (157)
T 3gxh_A 69 DYVYIPV-DWQNPKVEDVEAFFAAMDQHKGKDVLVHCLA 106 (157)
T ss_dssp EEEECCC-CTTSCCHHHHHHHHHHHHHTTTSCEEEECSB
T ss_pred eEEEecC-CCCCCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 3566776 66655 788888887776556699998854
Done!